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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1513 58.64 0 1850053..1852332 + 759 94968544 - Acid345_1516 - glycoside hydrolase family protein 1514 61.87 +1 1852413..1853204 + 263 94968545 - Acid345_1517 - hypothetical protein 1515 58.08 0 1853242..1853928 + 228 94968546 - Acid345_1518 - hypothetical protein 1516 57.92 0 1854020..1854625 + 201 94968547 - Acid345_1519 - hypothetical protein 1517 58.76 0 1855130..1856596 + 488 94968548 - Acid345_1520 - peptidase M20 1518 56.02 0 1856768..1857997 + 409 94968549 - Acid345_1521 - phosphoesterase 1519 58.90 0 1858061..1859167 - 368 94968550 - Acid345_1522 - Zn-dependent dipeptidase 1520 55.22 -1 1859244..1859444 - 66 94968551 - Acid345_1523 - cold-shock DNA-binding protein family protein 1521 59.89 0 1859883..1862183 + 766 94968552 - Acid345_1524 - CheA signal transduction histidine kinases 1522 58.82 0 1862176..1862634 + 152 94968553 - Acid345_1525 - CheW protein 1523 57.90 0 1862683..1865259 + 858 94968554 - Acid345_1526 - methyl-accepting chemotaxis sensory transducer 1524 58.67 0 1865259..1865633 + 124 94968555 - Acid345_1527 - response regulator receiver protein, CheY 1525 63.11 +1 1865630..1866697 + 355 94968556 - Acid345_1528 - response regulator receiver modulated CheB methylesterase 1526 56.57 0 1866701..1867522 + 273 94968557 - Acid345_1529 - MCP methyltransferase, CheR-type 1527 59.34 0 1867501..1868019 + 172 94968558 - Acid345_1530 - hypothetical protein 1528 59.34 0 1868021..1869466 - 481 94968559 - Acid345_1531 - aldehyde dehydrogenase 1529 58.96 0 1869474..1870784 - 436 94968560 - Acid345_1532 - aminotransferase 1530 58.52 0 1870788..1872260 - 490 94968561 - Acid345_1533 - methylmalonate-semialdehyde dehydrogenase [acylating] 1531 59.25 0 1872299..1873660 - 453 94968562 - Acid345_1534 - 4-aminobutyrate aminotransferase 1532 58.37 0 1873660..1875141 - 493 94968563 - Acid345_1535 - aldehyde dehydrogenase (acceptor) 1533 55.90 -1 1875160..1876590 - 476 94968564 - Acid345_1536 - amino acid transporter 1534 58.64 0 1876675..1878045 - 456 94968565 - Acid345_1537 - glutamate-1-semialdehyde 2,1-aminomutase 1535 57.10 0 1878137..1881835 - 1232 94968566 - Acid345_1538 - TonB-dependent receptor 1536 58.48 0 1881980..1882858 + 292 94968567 - Acid345_1539 - MerR family transcriptional regulator 1537 54.43 -1 1882877..1883938 + 353 94968568 - Acid345_1540 - ABC spermidine/putrescine transporter, periplasmic ligand binding protein 1538 60.00 0 1883947..1885011 + 354 94968569 - Acid345_1541 - spermidine/putrescine ABC transporter ATPase subunit 1539 58.27 0 1885011..1885856 + 281 94968570 - Acid345_1542 - ABC spermidine/putrescine transporter, inner membrane subunit 1540 58.57 0 1885856..1886683 + 275 94968571 - Acid345_1543 - ABC spermidine/putrescine transporter, inner membrane subunit 1541 57.56 0 1886680..1888194 + 504 94968572 - Acid345_1544 - amine oxidase 1542 59.28 0 1888252..1891569 - 1105 94968573 - Acid345_1545 - TonB-dependent receptor 1543 57.64 0 1891618..1892514 - 298 94968574 - Acid345_1546 - hypothetical protein 1544 58.76 0 1892614..1893891 + 425 94968575 - Acid345_1547 - DNA-directed DNA polymerase 1545 56.04 0 1893894..1894307 - 137 94968576 - Acid345_1548 - molybdenum-pterin binding protein 1546 60.85 0 1894436..1897633 + 1065 94968577 - Acid345_1549 - TonB-dependent receptor 1547 57.89 0 1897760..1898773 + 337 94968578 - Acid345_1550 - hypothetical protein 1548 58.65 0 1898812..1899846 + 344 94968579 - Acid345_1551 - D-alanine--D-alanine ligase 1549 53.24 -2 1900203..1900820 - 205 94968580 - Acid345_1552 - hypothetical protein 1550 67.07 +2 1900835..1901080 + 81 94968581 - Acid345_1553 - hypothetical protein 1551 60.54 0 1902024..1902806 + 260 94968582 - Acid345_1554 - hypothetical protein 1552 60.90 0 1902942..1903409 + 155 94968583 - Acid345_1555 - peptidase M52, hydrogen uptake protein 1553 68.04 +2 1903431..1903793 + 120 94968584 - Acid345_1556 - hydrogenase expression/formation protein HypA 1554 61.33 +1 1903812..1904561 - 249 94968585 - Acid345_1557 - pyruvate dehydrogenase complex E1 component, alpha subunit 1555 59.82 0 1904637..1907033 - 798 94968586 - Acid345_1558 - Lon-A peptidase 1556 56.60 0 1907332..1908603 - 423 94968587 clpX Acid345_1559 - ATP-dependent protease ATP-binding subunit 1557 57.95 0 1908820..1909404 - 194 94968588 - Acid345_1560 - ATP-dependent Clp protease proteolytic subunit ClpP 1558 59.13 0 1909495..1910808 - 437 94968589 - Acid345_1561 - trigger factor 1559 58.78 0 1910902..1911408 - 168 94968590 - Acid345_1562 - dual specificity protein phosphatase 1560 55.56 -1 1911453..1911767 + 104 94968591 - Acid345_1563 - hypothetical protein 1561 58.81 0 1911767..1912453 + 228 94968592 - Acid345_1564 - uracil-DNA glycosylase superfamily protein 1562 57.69 0 1912450..1913418 - 322 94968593 - Acid345_1565 - polysaccharide deacetylase 1563 60.13 0 1913513..1915729 - 738 94968594 - Acid345_1566 - TPR repeat-containing protein 1564 61.10 0 1915802..1916842 - 346 94968595 - Acid345_1567 - hypothetical protein 1565 56.26 0 1917069..1918346 + 425 94968596 - Acid345_1568 - peptidase M16-like 1566 61.35 +1 1918746..1919234 + 162 94968597 - Acid345_1569 - pilin, type IV, putative 1567 59.51 0 1919454..1919942 + 162 94968598 - Acid345_1570 - pilin, type IV, putative 1568 56.24 0 1920114..1921043 + 309 94968599 - Acid345_1571 - ABC transporter, ATPase subunit 1569 52.38 -2 1921040..1921816 + 258 94968600 - Acid345_1572 - hypothetical protein 1570 55.09 -1 1921816..1922826 + 336 94968601 - Acid345_1573 - hypothetical protein 1571 55.91 0 1922840..1923499 + 219 94968602 - Acid345_1574 - outer membrane lipoprotein carrier protein LolA 1572 57.51 0 1923577..1924788 + 403 94968603 - Acid345_1575 - type II secretion system protein 1573 58.01 0 1924798..1926438 + 546 94968604 - Acid345_1576 - type II secretion system protein E 1574 59.60 0 1926441..1928081 + 546 94968605 - Acid345_1577 - hypothetical protein 1575 55.49 -1 1928078..1928614 + 178 94968606 - Acid345_1578 - hypothetical protein 1576 55.91 0 1928616..1929173 + 185 94968607 - Acid345_1579 - hypothetical protein 1577 60.63 0 1929175..1930119 + 314 94968608 - Acid345_1580 - hypothetical protein 1578 56.86 0 1930188..1930748 - 186 94968609 - Acid345_1581 - HesB/YadR/YfhF 1579 54.12 -1 1930898..1931176 + 92 94968610 - Acid345_1582 - hypothetical protein 1580 60.20 0 1931415..1932992 - 525 94968611 - Acid345_1583 - hypothetical protein 1581 56.36 0 1933112..1933402 - 96 94968612 - Acid345_1584 - hypothetical protein 1582 57.26 0 1933512..1934138 - 208 94968613 - Acid345_1585 - hypothetical protein 1583 59.06 0 1934190..1934702 + 170 94968614 - Acid345_1586 - hypothetical protein 1584 58.66 0 1934699..1935310 - 203 94968615 - Acid345_1587 - GCN5-related N-acetyltransferase 1585 58.46 0 1935463..1936839 - 458 94968616 - Acid345_1588 - two component, sigma54 specific, Fis family transcriptional regulator 1586 57.00 0 1936902..1937501 - 199 94968617 - Acid345_1589 - hypothetical protein 1587 59.67 0 1937635..1938978 - 447 94968618 - Acid345_1590 - PAS/PAC sensor signal transduction histidine kinase 1588 56.97 0 1938975..1939964 - 329 94968619 - Acid345_1591 - type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A 1589 54.79 -1 1940048..1940569 + 173 94968620 - Acid345_1592 - hypothetical protein 1590 59.73 0 1940614..1941060 - 148 94968621 - Acid345_1593 - hypothetical protein 1591 57.25 0 1941167..1941697 - 176 94968622 - Acid345_1594 - hypothetical protein 1592 55.86 -1 1941709..1942032 + 107 94968623 - Acid345_1595 - hypothetical protein 1593 56.05 0 1942033..1942644 - 203 94968624 - Acid345_1596 - small GTP-binding protein 1594 57.99 0 1942660..1943973 - 437 94968625 - Acid345_1597 - peptidase M20D, amidohydrolase 1595 56.32 0 1944008..1944577 - 189 94968626 - Acid345_1598 - hypothetical protein 1596 57.78 0 1944735..1945229 + 164 94968627 - Acid345_1599 - response regulator receiver protein 1597 59.03 0 1945222..1945614 + 130 94968628 - Acid345_1600 - response regulator receiver protein 1598 57.23 0 1945611..1946108 - 165 94968629 - Acid345_1601 - carbonic anhydrase 1599 56.74 0 1946206..1946769 - 187 94968630 - Acid345_1602 - pilin, type IV, putative 1600 57.78 0 1947010..1947594 - 194 94968631 - Acid345_1603 - hypothetical protein 1601 56.97 0 1947681..1948742 + 353 94968632 - Acid345_1604 - hypothetical protein 1602 59.16 0 1948745..1949530 - 261 94968633 - Acid345_1605 - ABC transporter, ATPase subunit 1603 59.77 0 1949590..1950285 - 231 94968634 - Acid345_1606 - short-chain dehydrogenase/reductase SDR 1604 57.08 0 1950282..1951157 - 291 94968635 - Acid345_1607 - Beta-lactamase 1605 60.43 0 1951302..1951670 + 122 94968636 - Acid345_1608 - hypothetical protein 1606 53.98 -1 1951737..1952264 - 175 94968637 - Acid345_1609 - hypothetical protein 1607 60.58 0 1952295..1952672 - 125 94968638 - Acid345_1610 - hypothetical protein 1608 57.29 0 1952972..1953760 - 262 94968639 - Acid345_1611 - short-chain dehydrogenase/reductase SDR 1609 56.73 0 1954275..1955270 - 331 94968640 - Acid345_1612 - tagatose 1,6-diphosphate aldolase 1610 60.10 0 1955548..1956582 + 344 94968641 - Acid345_1613 - fructose-1,6-bisphosphate aldolase 1611 58.93 0 1956673..1957344 + 223 94968642 - Acid345_1614 - hypothetical protein 1612 59.57 0 1957404..1959431 - 675 94968643 - Acid345_1615 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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