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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1411 59.44 0 1712282..1712821 + 179 94968442 - Acid345_1414 - XRE family transcriptional regulator 1412 60.05 0 1713002..1715617 - 871 94968443 - Acid345_1415 - TonB-dependent receptor 1413 62.54 +1 1715674..1715988 - 104 94968444 - Acid345_1416 - hypothetical protein 1414 61.44 +1 1716195..1716998 + 267 94968445 - Acid345_1417 - undecaprenyl pyrophosphate synthetase 1415 56.28 0 1717002..1717925 + 307 94968446 - Acid345_1418 - phosphatidate cytidylyltransferase 1416 56.40 0 1718510..1719766 + 418 94968447 - Acid345_1419 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1417 57.72 0 1719789..1721129 + 446 94968448 - Acid345_1420 - peptidase M50, putative membrane-associated zinc metallopeptidase 1418 57.08 0 1721228..1721665 - 145 94968449 - Acid345_1421 - response regulator receiver protein 1419 58.30 0 1721719..1722435 - 238 94968450 - Acid345_1422 - cyclic nucleotide-binding protein 1420 58.70 0 1722575..1723816 + 413 94968451 ispG Acid345_1423 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1421 56.84 0 1723870..1724337 - 155 94968452 - Acid345_1424 - glyoxalase/bleomycin resistance protein/dioxygenase 1422 56.74 0 1724491..1725306 - 271 94968453 - Acid345_1425 - AraC family transcriptional regulator 1423 59.26 0 1725657..1726439 - 260 94968454 - Acid345_1426 - enoyl-CoA hydratase/isomerase 1424 57.62 0 1726867..1727739 - 290 94968455 - Acid345_1427 - hydroxymethylglutaryl-CoA lyase 1425 60.56 0 1727739..1729457 - 572 94968456 - Acid345_1428 - propionyl-CoA carboxylase 1426 55.43 -1 1729505..1730038 - 177 94968457 - Acid345_1429 - heat shock protein DnaJ-like 1427 61.63 +1 1730070..1730645 - 191 94968458 - Acid345_1430 - enoyl-CoA hydratase/isomerase 1428 60.52 0 1730642..1731373 - 243 94968459 - Acid345_1431 - hypothetical protein 1429 58.87 0 1731380..1731802 - 140 94968460 - Acid345_1432 - methylmalonyl-CoA mutase 1430 55.62 -1 1731938..1732417 - 159 94968461 - Acid345_1433 - hypothetical protein 1431 61.43 +1 1732620..1733039 - 139 94968462 - Acid345_1434 - peptidoglycan binding domain-containing protein 1432 61.05 0 1733349..1734986 - 545 94968463 - Acid345_1435 - peptidase S1C, Do 1433 59.27 0 1735246..1736151 - 301 94968464 - Acid345_1436 - DMT family permease 1434 56.65 0 1736272..1737060 - 262 94968465 - Acid345_1437 - hypothetical protein 1435 57.56 0 1737057..1737989 - 310 94968466 - Acid345_1438 - ABC transporter, ATPase subunit 1436 59.96 0 1738111..1738557 + 148 94968467 - Acid345_1439 - hypothetical protein 1437 55.70 -1 1738557..1738793 + 78 94968468 - Acid345_1440 - XRE family transcriptional regulator 1438 60.90 0 1738944..1740695 - 583 94968469 - Acid345_1441 - amidohydrolase 3 1439 59.89 0 1740708..1741961 - 417 94968470 - Acid345_1442 - peptidase M20 1440 57.87 0 1742240..1743808 - 522 94968471 - Acid345_1443 - succinate-semialdehyde dehydrogenase (NAD(P)+) 1441 59.04 0 1743884..1744657 - 257 94968472 - Acid345_1444 - tRNA pseudouridine synthase A 1442 60.68 0 1744883..1746955 + 690 94968473 - Acid345_1445 - outer membrane efflux protein 1443 55.99 0 1747027..1747869 + 280 94968474 - Acid345_1446 - glycosyl transferase family protein 1444 59.75 0 1747862..1748815 - 317 94968475 - Acid345_1447 - hypothetical protein 1445 58.35 0 1748934..1750352 - 472 94968476 - Acid345_1448 - serine phosphatase 1446 57.58 0 1750443..1751696 + 417 94968477 - Acid345_1449 - phosphodiesterase I 1447 59.34 0 1751702..1752097 - 131 94968478 - Acid345_1450 - hypothetical protein 1448 56.33 0 1752205..1752678 + 157 94968479 - Acid345_1451 - 3-demethylubiquinone-9 3-methyltransferase 1449 55.48 -1 1752719..1753183 - 154 94968480 - Acid345_1452 - hypothetical protein 1450 57.52 0 1753311..1755332 - 673 94968481 - Acid345_1453 - multi-sensor signal transduction histidine kinase 1451 58.78 0 1755493..1757292 + 599 94968482 - Acid345_1454 - methylmalonyl-CoA mutase 1452 58.19 0 1757315..1759780 + 821 94968483 - Acid345_1455 - serine/threonine protein kinase 1453 55.39 -1 1759790..1760188 + 132 94968484 - Acid345_1456 - glyoxalase/bleomycin resistance protein/dioxygenase 1454 53.89 -1 1760202..1760522 + 106 94968485 - Acid345_1457 - hypothetical protein 1455 59.26 0 1760589..1761803 - 404 94968486 - Acid345_1458 - aminotransferase 1456 60.34 0 1761928..1763445 - 505 94968487 - Acid345_1459 - aldehyde dehydrogenase 1457 58.68 0 1763740..1765029 + 429 94968488 - Acid345_1460 - fibronectin, type III 1458 58.12 0 1765239..1766303 + 354 94968489 - Acid345_1461 - rod shape-determining protein MreB 1459 57.78 0 1766363..1767442 + 359 94968490 - Acid345_1462 - rod shape-determining protein MreC 1460 56.87 0 1767439..1767969 + 176 94968491 - Acid345_1463 - hypothetical protein 1461 59.13 0 1767997..1769682 + 561 94968492 - Acid345_1464 - gamma-glutamyltransferase 2 1462 59.78 0 1769828..1771903 + 691 94968493 - Acid345_1465 - peptidoglycan glycosyltransferase 1463 54.85 -1 1771900..1772991 + 363 94968494 - Acid345_1466 - rod shape-determining protein RodA 1464 59.27 0 1773461..1776556 + 1031 94968495 - Acid345_1467 - ribonuclease 1465 54.43 -1 1777185..1777421 + 78 94968496 - Acid345_1468 - excisionase/Xis, DNA-binding 1466 57.26 0 1777433..1778485 + 350 94968497 - Acid345_1469 - type IV pilus assembly protein PilM 1467 55.44 -1 1778482..1779060 + 192 94968498 - Acid345_1470 - fimbrial assembly protein 1468 54.97 -1 1779075..1779698 + 207 94968499 - Acid345_1471 - hypothetical protein 1469 58.29 0 1779711..1780271 + 186 94968500 - Acid345_1472 - hypothetical protein 1470 61.60 +1 1780498..1782924 + 808 94968501 - Acid345_1473 - type II and III secretion system protein 1471 58.82 0 1782994..1784331 + 445 94968502 - Acid345_1474 - amino acid transporter 1472 58.06 0 1784328..1785419 + 363 94968503 - Acid345_1475 - aminotransferase 1473 58.44 0 1785520..1787112 + 530 94968504 - Acid345_1476 - EmrB/QacA family drug resistance transporter 1474 57.43 0 1787402..1788310 - 302 94968505 - Acid345_1477 - LysR family transcriptional regulator 1475 59.91 0 1788381..1789223 - 280 94968506 - Acid345_1478 - pyrroline-5-carboxylate reductase 1476 58.54 0 1789269..1790216 - 315 94968507 - Acid345_1479 - homoserine kinase 1477 59.01 0 1790213..1791439 - 408 94968508 - Acid345_1480 - L-threonine synthase 1478 59.65 0 1791448..1792743 - 431 94968509 - Acid345_1481 - homoserine dehydrogenase 1479 60.21 0 1792744..1794153 - 469 94968510 - Acid345_1482 - aspartate kinase III 1480 58.59 0 1794417..1795382 - 321 94968511 - Acid345_1483 - malate dehydrogenase (NAD) 1481 57.22 0 1795454..1798840 - 1128 94968512 - Acid345_1484 - hypothetical protein 1482 58.97 0 1799167..1802493 + 1108 94968513 - Acid345_1485 - trehalose synthase-like 1483 61.70 +1 1802522..1804051 + 509 94968514 - Acid345_1486 - 4-alpha-glucanotransferase 1484 58.85 0 1804101..1804586 + 161 94968515 - Acid345_1487 - hypothetical protein 1485 60.07 0 1804800..1807421 - 873 94968516 - Acid345_1488 - UTP-GlnB (protein PII) uridylyltransferase, GlnD 1486 56.43 0 1807393..1807734 - 113 94968517 - Acid345_1489 - nitrogen regulatory protein P-II (GlnB, GlnK) 1487 60.25 0 1807764..1809182 - 472 94968518 - Acid345_1490 - ammonium transporter 1488 59.70 0 1809398..1811434 + 678 94968519 - Acid345_1491 - PgPepO oligopeptidase 1489 60.43 0 1811615..1815223 + 1202 94968520 - Acid345_1492 - alpha amylase 1490 60.35 0 1815360..1816658 - 432 94968521 - Acid345_1493 - amidase 1491 64.09 +2 1816724..1818472 - 582 94968522 - Acid345_1494 - putative GAF sensor protein 1492 56.93 0 1818665..1818931 + 88 94968523 - Acid345_1495 - hypothetical protein 1493 58.97 0 1819383..1821278 + 631 94968524 - Acid345_1496 - multicopper oxidase, type 2 1494 61.47 +1 1821348..1823696 - 782 94968525 - Acid345_1497 - hypothetical protein 1495 58.06 0 1824111..1824830 + 239 94968526 - Acid345_1498 - Crp/FNR family transcriptional regulator 1496 62.05 +1 1824995..1825492 + 165 94968527 - Acid345_1499 - cyclic nucleotide-binding protein 1497 58.28 0 1825548..1826894 - 448 94968528 - Acid345_1500 - major facilitator transporter 1498 58.24 0 1827378..1830749 + 1123 94968529 - Acid345_1501 - TonB-dependent receptor 1499 59.79 0 1830984..1832816 + 610 94968530 - Acid345_1502 - alpha amylase 1500 61.11 0 1832952..1835237 + 761 94968531 - Acid345_1503 - hypothetical protein 1501 61.46 +1 1835543..1837003 + 486 94968532 - Acid345_1504 - peptidase M20C, Xaa-His dipeptidase 1502 61.37 +1 1837010..1838254 + 414 94968533 - Acid345_1505 - ABC efflux pump, inner membrane subunit 1503 57.30 0 1838257..1839495 + 412 94968534 - Acid345_1506 - ABC efflux pump, inner membrane subunit 1504 57.88 0 1839601..1840431 + 276 94968535 - Acid345_1507 - hypothetical protein 1505 60.00 0 1840539..1841258 - 239 94968536 - Acid345_1508 - hypothetical protein 1506 60.30 0 1841230..1841496 - 88 94968537 - Acid345_1509 - hypothetical protein 1507 59.98 0 1841499..1842335 - 278 94968538 - Acid345_1510 - hypothetical protein 1508 57.80 0 1842514..1843167 + 217 94968539 - Acid345_1511 - putative cyclase 1509 65.66 +2 1843323..1844420 - 365 94968540 - Acid345_1512 - FAD dependent oxidoreductase 1510 61.56 +1 1844411..1845076 - 221 94968541 - Acid345_1513 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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