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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1367 57.89 0 1661788..1662243 + 151 94968398 - Acid345_1370 - hypothetical protein 1368 59.09 0 1662393..1663805 + 470 94968399 - Acid345_1371 - hypothetical protein 1369 58.33 0 1663830..1664093 + 87 94968400 - Acid345_1372 - hypothetical protein 1370 59.90 0 1664237..1665388 + 383 94968401 - Acid345_1373 - AMP-dependent synthetase and ligase 1371 57.99 0 1665389..1666126 + 245 94968402 - Acid345_1374 - short-chain dehydrogenase/reductase SDR 1372 60.74 0 1666128..1667156 + 342 94968403 - Acid345_1375 - hypothetical protein 1373 55.91 0 1667186..1668115 - 309 94968404 - Acid345_1376 - meta-pathway phenol degradation protein 1374 59.11 0 1668166..1668999 - 277 94968405 - Acid345_1377 - bile acid/sodium symporter 1375 56.37 0 1669070..1670128 - 352 94968406 - Acid345_1378 - hypothetical protein 1376 57.66 0 1670154..1671497 - 447 94968407 - Acid345_1379 - hypothetical protein 1377 54.08 -1 1671531..1672142 - 203 94968408 - Acid345_1380 - hypothetical protein 1378 60.16 0 1672429..1673919 - 496 94968409 - Acid345_1381 - aldehyde dehydrogenase (acceptor) 1379 58.54 0 1674030..1674521 - 163 94968410 - Acid345_1382 - hypothetical protein 1380 56.67 0 1674707..1675486 + 259 94968411 - Acid345_1383 - putative integral membrane protein 1381 61.80 +1 1675471..1677297 + 608 94968412 sdhA Acid345_1384 - succinate dehydrogenase flavoprotein subunit 1382 56.53 0 1677297..1678046 + 249 94968413 - Acid345_1385 - fumarate reductase iron-sulfur subunit 1383 58.19 0 1678056..1678586 + 176 94968414 - Acid345_1386 - hypothetical protein 1384 57.77 0 1678692..1683164 - 1490 94968415 - Acid345_1387 - integrin-like protein 1385 60.06 0 1683678..1685069 - 463 94968416 - Acid345_1388 - two component, sigma54 specific, Fis family transcriptional regulator 1386 58.92 0 1685170..1686822 - 550 94968417 - Acid345_1389 - signal transduction histidine kinase, nitrogen specific, NtrB 1387 58.77 0 1686925..1688139 - 404 94968418 - Acid345_1390 - type II secretion system protein 1388 59.13 0 1688187..1689314 - 375 94968419 - Acid345_1391 - twitching motility protein 1389 56.82 0 1689374..1691089 - 571 94968420 - Acid345_1392 - type II secretion system protein E 1390 60.02 0 1692161..1694431 + 756 94968421 - Acid345_1393 - multi-sensor signal transduction histidine kinase 1391 60.01 0 1694409..1695761 + 450 94968422 - Acid345_1394 - two component, sigma54 specific, Fis family transcriptional regulator 1392 61.82 +1 1695763..1696629 + 288 94968423 - Acid345_1395 - ABC peptide transporter, inner membrane subunit 1393 60.66 0 1696780..1697112 + 110 94968424 - Acid345_1396 - hypothetical protein 1394 54.83 -1 1697168..1697581 - 137 94968425 - Acid345_1397 - PilT protein-like 1395 60.28 0 1697581..1697862 - 93 94968426 - Acid345_1398 - prevent-host-death protein 1396 59.33 0 1698005..1698508 + 167 94968427 - Acid345_1399 - hypothetical protein 1397 60.98 0 1698524..1699138 + 204 94968428 - Acid345_1400 - hypothetical protein 1398 60.53 0 1699150..1700061 + 303 94968429 - Acid345_1401 - hypothetical protein 1399 60.27 0 1700125..1701594 + 489 94968430 - Acid345_1402 - flotillin 1400 60.24 0 1701864..1702532 + 222 94968431 - Acid345_1403 - phage shock protein A, PspA 1401 58.94 0 1702615..1703067 + 150 94968432 - Acid345_1404 - hypothetical protein 1402 58.09 0 1703071..1703991 - 306 94968433 - Acid345_1405 - hypothetical protein 1403 59.13 0 1704034..1705413 - 459 94968434 - Acid345_1406 - hypothetical protein 1404 57.43 0 1705445..1706353 + 302 94968435 - Acid345_1407 - Allergen V5/Tpx-1 related 1405 53.62 -1 1706527..1706802 - 91 94968436 - Acid345_1408 - hypothetical protein 1406 58.44 0 1707037..1707486 + 149 94968437 - Acid345_1409 - 4-hydroxybenzoyl-CoA thioesterase 1407 61.90 +1 1707483..1709033 + 516 94968438 - Acid345_1410 - histidine ammonia-lyase 1408 60.83 0 1709262..1710152 + 296 94968439 - Acid345_1411 - hypothetical protein 1409 58.33 0 1710198..1710773 - 191 94968440 - Acid345_1412 - metal dependent phosphohydrolase 1410 63.19 +1 1711023..1711970 + 315 94968441 - Acid345_1413 - hypothetical protein 1411 59.44 0 1712282..1712821 + 179 94968442 - Acid345_1414 - XRE family transcriptional regulator 1412 60.05 0 1713002..1715617 - 871 94968443 - Acid345_1415 - TonB-dependent receptor 1413 62.54 +1 1715674..1715988 - 104 94968444 - Acid345_1416 - hypothetical protein 1414 61.44 +1 1716195..1716998 + 267 94968445 - Acid345_1417 - undecaprenyl pyrophosphate synthetase 1415 56.28 0 1717002..1717925 + 307 94968446 - Acid345_1418 - phosphatidate cytidylyltransferase 1416 56.40 0 1718510..1719766 + 418 94968447 - Acid345_1419 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1417 57.72 0 1719789..1721129 + 446 94968448 - Acid345_1420 - peptidase M50, putative membrane-associated zinc metallopeptidase 1418 57.08 0 1721228..1721665 - 145 94968449 - Acid345_1421 - response regulator receiver protein 1419 58.30 0 1721719..1722435 - 238 94968450 - Acid345_1422 - cyclic nucleotide-binding protein 1420 58.70 0 1722575..1723816 + 413 94968451 ispG Acid345_1423 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1421 56.84 0 1723870..1724337 - 155 94968452 - Acid345_1424 - glyoxalase/bleomycin resistance protein/dioxygenase 1422 56.74 0 1724491..1725306 - 271 94968453 - Acid345_1425 - AraC family transcriptional regulator 1423 59.26 0 1725657..1726439 - 260 94968454 - Acid345_1426 - enoyl-CoA hydratase/isomerase 1424 57.62 0 1726867..1727739 - 290 94968455 - Acid345_1427 - hydroxymethylglutaryl-CoA lyase 1425 60.56 0 1727739..1729457 - 572 94968456 - Acid345_1428 - propionyl-CoA carboxylase 1426 55.43 -1 1729505..1730038 - 177 94968457 - Acid345_1429 - heat shock protein DnaJ-like 1427 61.63 +1 1730070..1730645 - 191 94968458 - Acid345_1430 - enoyl-CoA hydratase/isomerase 1428 60.52 0 1730642..1731373 - 243 94968459 - Acid345_1431 - hypothetical protein 1429 58.87 0 1731380..1731802 - 140 94968460 - Acid345_1432 - methylmalonyl-CoA mutase 1430 55.62 -1 1731938..1732417 - 159 94968461 - Acid345_1433 - hypothetical protein 1431 61.43 +1 1732620..1733039 - 139 94968462 - Acid345_1434 - peptidoglycan binding domain-containing protein 1432 61.05 0 1733349..1734986 - 545 94968463 - Acid345_1435 - peptidase S1C, Do 1433 59.27 0 1735246..1736151 - 301 94968464 - Acid345_1436 - DMT family permease 1434 56.65 0 1736272..1737060 - 262 94968465 - Acid345_1437 - hypothetical protein 1435 57.56 0 1737057..1737989 - 310 94968466 - Acid345_1438 - ABC transporter, ATPase subunit 1436 59.96 0 1738111..1738557 + 148 94968467 - Acid345_1439 - hypothetical protein 1437 55.70 -1 1738557..1738793 + 78 94968468 - Acid345_1440 - XRE family transcriptional regulator 1438 60.90 0 1738944..1740695 - 583 94968469 - Acid345_1441 - amidohydrolase 3 1439 59.89 0 1740708..1741961 - 417 94968470 - Acid345_1442 - peptidase M20 1440 57.87 0 1742240..1743808 - 522 94968471 - Acid345_1443 - succinate-semialdehyde dehydrogenase (NAD(P)+) 1441 59.04 0 1743884..1744657 - 257 94968472 - Acid345_1444 - tRNA pseudouridine synthase A 1442 60.68 0 1744883..1746955 + 690 94968473 - Acid345_1445 - outer membrane efflux protein 1443 55.99 0 1747027..1747869 + 280 94968474 - Acid345_1446 - glycosyl transferase family protein 1444 59.75 0 1747862..1748815 - 317 94968475 - Acid345_1447 - hypothetical protein 1445 58.35 0 1748934..1750352 - 472 94968476 - Acid345_1448 - serine phosphatase 1446 57.58 0 1750443..1751696 + 417 94968477 - Acid345_1449 - phosphodiesterase I 1447 59.34 0 1751702..1752097 - 131 94968478 - Acid345_1450 - hypothetical protein 1448 56.33 0 1752205..1752678 + 157 94968479 - Acid345_1451 - 3-demethylubiquinone-9 3-methyltransferase 1449 55.48 -1 1752719..1753183 - 154 94968480 - Acid345_1452 - hypothetical protein 1450 57.52 0 1753311..1755332 - 673 94968481 - Acid345_1453 - multi-sensor signal transduction histidine kinase 1451 58.78 0 1755493..1757292 + 599 94968482 - Acid345_1454 - methylmalonyl-CoA mutase 1452 58.19 0 1757315..1759780 + 821 94968483 - Acid345_1455 - serine/threonine protein kinase 1453 55.39 -1 1759790..1760188 + 132 94968484 - Acid345_1456 - glyoxalase/bleomycin resistance protein/dioxygenase 1454 53.89 -1 1760202..1760522 + 106 94968485 - Acid345_1457 - hypothetical protein 1455 59.26 0 1760589..1761803 - 404 94968486 - Acid345_1458 - aminotransferase 1456 60.34 0 1761928..1763445 - 505 94968487 - Acid345_1459 - aldehyde dehydrogenase 1457 58.68 0 1763740..1765029 + 429 94968488 - Acid345_1460 - fibronectin, type III 1458 58.12 0 1765239..1766303 + 354 94968489 - Acid345_1461 - rod shape-determining protein MreB 1459 57.78 0 1766363..1767442 + 359 94968490 - Acid345_1462 - rod shape-determining protein MreC 1460 56.87 0 1767439..1767969 + 176 94968491 - Acid345_1463 - hypothetical protein 1461 59.13 0 1767997..1769682 + 561 94968492 - Acid345_1464 - gamma-glutamyltransferase 2 1462 59.78 0 1769828..1771903 + 691 94968493 - Acid345_1465 - peptidoglycan glycosyltransferase 1463 54.85 -1 1771900..1772991 + 363 94968494 - Acid345_1466 - rod shape-determining protein RodA 1464 59.27 0 1773461..1776556 + 1031 94968495 - Acid345_1467 - ribonuclease 1465 54.43 -1 1777185..1777421 + 78 94968496 - Acid345_1468 - excisionase/Xis, DNA-binding 1466 57.26 0 1777433..1778485 + 350 94968497 - Acid345_1469 - type IV pilus assembly protein PilM 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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