version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1304 59.08 0 1586264..1586764 - 166 94968335 - Acid345_1307 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1305 58.31 0 1586800..1587864 - 354 94968336 - Acid345_1308 - respiratory-chain NADH dehydrogenase, subunit 1 1306 60.79 0 1588065..1590431 - 788 94968337 - Acid345_1309 - NADH-quinone oxidoreductase, chain G 1307 58.75 0 1590424..1590726 - 100 94968338 - Acid345_1310 - hypothetical protein 1308 59.62 0 1590735..1592054 - 439 94968339 - Acid345_1311 - NADH-quinone oxidoreductase, F subunit 1309 56.94 0 1592082..1592564 - 160 94968340 - Acid345_1312 - NADH-quinone oxidoreductase, E subunit 1310 59.54 0 1592656..1593861 - 401 94968341 - Acid345_1313 - NADH dehydrogenase I, D subunit 1311 56.63 0 1593864..1594361 - 165 94968342 - Acid345_1314 - NADH (or F420H2) dehydrogenase, subunit C 1312 53.68 -1 1594364..1594771 - 135 94968343 - Acid345_1315 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1313 59.24 0 1594988..1595566 + 192 94968344 - Acid345_1316 - hypothetical protein 1314 58.21 0 1595614..1595814 + 66 94968345 - Acid345_1317 - thiamine biosynthesis protein ThiS 1315 58.92 0 1595814..1596239 + 141 94968346 - Acid345_1318 - hypothetical protein 1316 56.76 0 1596362..1596886 + 174 94968347 - Acid345_1319 - MerR family transcriptional regulator 1317 54.55 -1 1596913..1597176 + 87 94968348 - Acid345_1320 - hypothetical protein 1318 60.00 0 1597300..1598439 - 379 94968349 - Acid345_1321 - chromate transporter 1319 59.36 0 1598436..1598873 - 145 94968350 - Acid345_1322 - DoxX 1320 55.37 -1 1598870..1599577 - 235 94968351 - Acid345_1323 - hypothetical protein 1321 60.80 0 1599731..1600054 + 107 94968352 - Acid345_1324 - phage shock protein C, PspC 1322 60.75 0 1600252..1600623 - 123 94968353 - Acid345_1325 - glyoxalase/bleomycin resistance protein/dioxygenase 1323 58.46 0 1600656..1601642 + 328 94968354 - Acid345_1326 - endonuclease IV 1324 61.31 +1 1601701..1602447 - 248 94968355 - Acid345_1327 - methionine aminopeptidase, type I 1325 59.08 0 1602517..1605087 + 856 94968356 - Acid345_1328 - leucyl-tRNA synthetase 1326 63.33 +1 1605365..1605694 - 109 94968357 - Acid345_1329 - hypothetical protein 1327 60.56 0 1605741..1606379 - 212 94968358 - Acid345_1330 - hypothetical protein 1328 63.80 +1 1606389..1607609 - 406 94968359 - Acid345_1331 - putative transcriptional regulator, CadC 1329 59.46 0 1607705..1608523 + 272 94968360 - Acid345_1332 - protein of unknown function DUF899, thioredoxin-like 1330 60.42 0 1608710..1609510 + 266 94968361 - Acid345_1333 - protein of unknown function DUF899, thioredoxin-like 1331 59.71 0 1609870..1612113 + 747 94968362 - Acid345_1334 - hypothetical protein 1332 61.51 +1 1612383..1614515 - 710 94968363 - Acid345_1335 - serine phosphatase 1333 59.79 0 1614803..1615777 + 324 94968364 - Acid345_1336 - hypothetical protein 1334 59.29 0 1615823..1616758 + 311 94968365 - Acid345_1337 - thioredoxin reductase 1335 56.24 0 1616987..1617907 + 306 94968366 - Acid345_1338 - L-proline dehydrogenase 1336 57.08 0 1618001..1618855 + 284 94968367 - Acid345_1339 - hypothetical protein 1337 62.05 +1 1618904..1619812 - 302 94968368 - Acid345_1340 - hypothetical protein 1338 57.93 0 1619861..1620352 - 163 94968369 - Acid345_1341 - hypothetical protein 1339 56.62 0 1620361..1620957 - 198 94968370 - Acid345_1342 - ECF subfamily RNA polymerase sigma-24 factor 1340 59.07 0 1621580..1623421 + 613 94968371 - Acid345_1343 - hypothetical protein 1341 56.06 0 1623432..1625816 + 794 94968372 - Acid345_1344 - adenylate/guanylate cyclase 1342 61.25 +1 1625898..1635263 + 3121 94968373 - Acid345_1345 - hypothetical protein 1343 57.30 0 1635348..1635902 + 184 94968374 - Acid345_1346 - hypothetical protein 1344 58.90 0 1635903..1636649 - 248 94968375 - Acid345_1347 - hypothetical protein 1345 61.78 +1 1636670..1638328 - 552 94968376 - Acid345_1348 - hypothetical protein 1346 59.26 0 1638384..1638977 + 197 94968377 - Acid345_1349 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1347 62.13 +1 1639290..1639730 - 146 94968378 - Acid345_1350 - NUDIX hydrolase 1348 57.88 0 1639740..1640285 - 181 94968379 - Acid345_1351 - hypothetical protein 1349 58.54 0 1640300..1641025 + 241 94968380 - Acid345_1352 - hypothetical protein 1350 60.99 0 1641254..1642327 + 357 94968381 - Acid345_1353 - hypothetical protein 1351 58.49 0 1642696..1644639 - 647 94968382 - Acid345_1354 - hypothetical protein 1352 60.04 0 1644835..1645725 - 296 94968383 - Acid345_1355 - LysR family transcriptional regulator 1353 60.96 0 1645812..1648070 + 752 94968384 - Acid345_1356 - catalase/peroxidase HPI 1354 59.42 0 1648184..1648459 + 91 94968385 - Acid345_1357 - hypothetical protein 1355 60.13 0 1648481..1648954 - 157 94968386 - Acid345_1358 - GCN5-related N-acetyltransferase 1356 58.18 0 1649086..1651806 - 906 94968387 - Acid345_1359 - glycoside hydrolase family protein 1357 58.40 0 1652018..1652380 + 120 94968388 - Acid345_1360 - hypothetical protein 1358 60.67 0 1652468..1652917 - 149 94968389 - Acid345_1361 - hypothetical protein 1359 58.33 0 1653012..1654499 - 495 94968390 - Acid345_1362 - peptidase M28 1360 61.88 +1 1654614..1655093 + 159 94968391 - Acid345_1363 - hypothetical protein 1361 60.43 0 1655090..1656355 + 421 94968392 - Acid345_1364 - putative lipoprotein 1362 60.77 0 1656504..1657334 + 276 94968393 - Acid345_1365 - diguanylate cyclase 1363 59.89 0 1657456..1658931 - 491 94968394 - Acid345_1366 - von Willebrand factor, type A 1364 59.36 0 1659054..1660025 - 323 94968395 - Acid345_1367 - zinc-binding alcohol dehydrogenase 1365 57.55 0 1660035..1660385 - 116 94968396 - Acid345_1368 - hypothetical protein 1366 60.25 0 1660523..1661551 - 342 94968397 - Acid345_1369 - putative transmembrane protein 1367 57.89 0 1661788..1662243 + 151 94968398 - Acid345_1370 - hypothetical protein 1368 59.09 0 1662393..1663805 + 470 94968399 - Acid345_1371 - hypothetical protein 1369 58.33 0 1663830..1664093 + 87 94968400 - Acid345_1372 - hypothetical protein 1370 59.90 0 1664237..1665388 + 383 94968401 - Acid345_1373 - AMP-dependent synthetase and ligase 1371 57.99 0 1665389..1666126 + 245 94968402 - Acid345_1374 - short-chain dehydrogenase/reductase SDR 1372 60.74 0 1666128..1667156 + 342 94968403 - Acid345_1375 - hypothetical protein 1373 55.91 0 1667186..1668115 - 309 94968404 - Acid345_1376 - meta-pathway phenol degradation protein 1374 59.11 0 1668166..1668999 - 277 94968405 - Acid345_1377 - bile acid/sodium symporter 1375 56.37 0 1669070..1670128 - 352 94968406 - Acid345_1378 - hypothetical protein 1376 57.66 0 1670154..1671497 - 447 94968407 - Acid345_1379 - hypothetical protein 1377 54.08 -1 1671531..1672142 - 203 94968408 - Acid345_1380 - hypothetical protein 1378 60.16 0 1672429..1673919 - 496 94968409 - Acid345_1381 - aldehyde dehydrogenase (acceptor) 1379 58.54 0 1674030..1674521 - 163 94968410 - Acid345_1382 - hypothetical protein 1380 56.67 0 1674707..1675486 + 259 94968411 - Acid345_1383 - putative integral membrane protein 1381 61.80 +1 1675471..1677297 + 608 94968412 sdhA Acid345_1384 - succinate dehydrogenase flavoprotein subunit 1382 56.53 0 1677297..1678046 + 249 94968413 - Acid345_1385 - fumarate reductase iron-sulfur subunit 1383 58.19 0 1678056..1678586 + 176 94968414 - Acid345_1386 - hypothetical protein 1384 57.77 0 1678692..1683164 - 1490 94968415 - Acid345_1387 - integrin-like protein 1385 60.06 0 1683678..1685069 - 463 94968416 - Acid345_1388 - two component, sigma54 specific, Fis family transcriptional regulator 1386 58.92 0 1685170..1686822 - 550 94968417 - Acid345_1389 - signal transduction histidine kinase, nitrogen specific, NtrB 1387 58.77 0 1686925..1688139 - 404 94968418 - Acid345_1390 - type II secretion system protein 1388 59.13 0 1688187..1689314 - 375 94968419 - Acid345_1391 - twitching motility protein 1389 56.82 0 1689374..1691089 - 571 94968420 - Acid345_1392 - type II secretion system protein E 1390 60.02 0 1692161..1694431 + 756 94968421 - Acid345_1393 - multi-sensor signal transduction histidine kinase 1391 60.01 0 1694409..1695761 + 450 94968422 - Acid345_1394 - two component, sigma54 specific, Fis family transcriptional regulator 1392 61.82 +1 1695763..1696629 + 288 94968423 - Acid345_1395 - ABC peptide transporter, inner membrane subunit 1393 60.66 0 1696780..1697112 + 110 94968424 - Acid345_1396 - hypothetical protein 1394 54.83 -1 1697168..1697581 - 137 94968425 - Acid345_1397 - PilT protein-like 1395 60.28 0 1697581..1697862 - 93 94968426 - Acid345_1398 - prevent-host-death protein 1396 59.33 0 1698005..1698508 + 167 94968427 - Acid345_1399 - hypothetical protein 1397 60.98 0 1698524..1699138 + 204 94968428 - Acid345_1400 - hypothetical protein 1398 60.53 0 1699150..1700061 + 303 94968429 - Acid345_1401 - hypothetical protein 1399 60.27 0 1700125..1701594 + 489 94968430 - Acid345_1402 - flotillin 1400 60.24 0 1701864..1702532 + 222 94968431 - Acid345_1403 - phage shock protein A, PspA 1401 58.94 0 1702615..1703067 + 150 94968432 - Acid345_1404 - hypothetical protein 1402 58.09 0 1703071..1703991 - 306 94968433 - Acid345_1405 - hypothetical protein 1403 59.13 0 1704034..1705413 - 459 94968434 - Acid345_1406 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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