IslandPath Analysis: Oceanobacillus iheyensis



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.64   STD DEV: 3.25
Oceanobacillus iheyensis, complete genome - 0..3630528
3496 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 33.41         300..1643     	 +	447	23097456	dnaA	OB0001	-	chromosomal replication initiation protein	
2	 33.16        1830..2966     	 +	378	23097457	dnaN	OB0002	-	DNA-directed DNA polymerase III beta chain	
3	 36.49        3219..3440     	 +	73	23097458	-	OB0003	-	hypothetical conserved protein	
4	 34.95        3443..4552     	 +	369	23097459	recF	OB0004	-	DNA repair and genetic recombination	
5	 34.04        4588..4869     	 +	93	23097460	-	OB0005	-	hypothetical conserved protein	
6	 38.01        5109..7034     	 +	641	23097461	gyrB	OB0006	-	DNA gyrase subunit B	
7	 38.50        7123..9636     	 +	837	23097462	gyrA	OB0007	-	DNA gyrase subunit A	
8	 36.50        9707..10813    	 +	368	23097463	-	OB0008	-	hypothetical conserved protein	
9	 35.74       10876..11829    	 -	317	23097464	-	OB0009	-	hypothetical conserved protein	
10	 37.96       12072..13541    	 +	489	23097465	-	OB0010	-	inosine-5'-monophosphate dehydrogenase	
11	 36.53       13774..15117    	 +	447	23097466	-	OB0011	-	serine-type D-Ala-D-Ala carboxypeptidase	
12	 37.96       15503..16777    	 +	424	23097467	-	OB0012	-	seryl-tRNA synthetase	
13	 38.87       17534..18346    	 +	270	23097468	-	OB0013	-	pyrroline-5-carboxylate reductase	
14	 31.62 -1    18360..18650    	 +	96	23097469	-	OB0014	-	hypothetical protein	
15	 34.50       18952..19638    	 -	228	23097470	-	OB0015	-	deoxypurine kinase subunit	
16	 34.25       19659..20309    	 -	216	23097471	-	OB0016	-	deoxypurine kinase subunit	
17	 38.50       20453..21691    	 +	412	23097472	-	OB0017	-	bicyclomycin resistance protein	
18	 28.29 -2    22195..22650    	 +	151	23097473	-	OB0018	-	hypothetical conserved protein	
19	 27.51 -2    22747..22935    	 -	62	23097474	-	OB0019	-	hypothetical protein	
20	 26.28 -2    23092..23247    	 +	51	23097475	-	OB0020	-	hypothetical protein	
21	 37.98       24172..25398    	 +	408	23097476	-	OB0021	-	H(+):sodium-glutamate symporter	
22	 39.10 +1    25588..27303    	 +	571	23097477	-	OB0022	-	acetyl-CoA synthetase	
23	 36.80       27463..27981    	 +	172	23097478	-	OB0023	-	general stress protein 18 (GSP18)	
24	 39.15 +1    28261..29550    	 -	429	23097479	-	OB0024	-	hypothetical conserved protein	
25	 32.58       29612..30145    	 -	177	23097480	-	OB0025	-	isochorismatase	
26	 40.72 +1    30226..30726    	 +	166	23097481	-	OB0026	-	hypothetical conserved protein	
27	 36.60       31192..32109    	 +	305	23097482	-	OB0027	-	glycine betaine ABC transporter glycine betaine-binding protein	
28	 39.63 +1    32258..33289    	 +	343	23097483	-	OB0028	-	NADH-dependent flavin oxidoreductase	
29	 37.60       33477..35186    	 +	569	23097484	-	OB0029	-	DNA polymerase III gamma and tau subunits	
30	 35.24       35220..35534    	 +	104	23097485	-	OB0030	-	hypothetical conserved protein	
31	 39.20 +1    35698..36294    	 +	198	23097486	-	OB0031	-	recombination protein (DNA repair and genetic recombination)	
32	 33.33       36331..36543    	 +	70	23097487	-	OB0032	-	hypothetical conserved protein	
33	 35.98       36792..37055    	 +	87	23097488	bofA	OB0033	-	pro-sigma K processing regulatory protein	
34	 32.32 -1    37126..37323    	 +	65	23097489	-	OB0034	-	hypothetical conserved protein	
35	 37.56       37465..38883    	 +	472	23097490	-	OB0035	-	lysine decarboxylase	
36	 35.84       38894..39571    	 +	225	23097491	-	OB0036	-	thymidylate kinase	
37	 33.64       39540..39869    	 +	109	23097492	-	OB0037	-	hypothetical conserved protein	
38	 34.49       39898..40329    	 +	143	23097493	-	OB0038	-	hypothetical conserved protein	
39	 36.26       40378..41367    	 +	329	23097494	-	OB0039	-	DNA polymerase III delta subunit	
40	 33.70       41372..42196    	 +	274	23097495	-	OB0040	-	signal peptidase II	
41	 33.06       42211..42573    	 +	120	23097496	-	OB0041	-	hypothetical conserved protein	
42	 36.30       42851..43591    	 +	246	23097497	-	OB0042	-	hypothetical conserved protein	
43	 35.63       43584..43844    	 +	86	23097498	-	OB0043	-	hypothetical conserved protein	
44	 37.87       43851..44732    	 +	293	23097499	-	OB0044	-	hypothetical conserved protein	
45	 37.68       44806..45081    	 -	91	23097500	-	OB0045	-	transcriptional pleiotropic regulator of transition state genes	
46	 38.18       45421..47442    	 +	673	23097501	-	OB0046	-	methionine-tRNA ligase	
47	 37.61       47567..48337    	 +	256	23097502	-	OB0047	-	hypothetical conserved protein	
48	 37.78       48597..49811    	 +	404	23097503	-	OB0048	-	hypothetical conserved protein	
49	 36.70       49897..50490    	 +	197	23097504	-	OB0049	-	hypothetical conserved protein	
50	 36.38       50456..51340    	 +	294	23097505	-	OB0050	-	dimethyladenosine transferase (16S rRNA dimethylase)	
51	 37.44       51423..52298    	 +	291	23097506	-	OB0051	-	hypothetical conserved protein	
52	 45.05 +2    52459..52680    	 +	73	23097507	-	OB0052	-	hypothetical protein	
53	 38.96 +1    52888..53136    	 +	82	23097508	-	OB0053	-	hypothetical conserved protein	
54	 43.10 +2    53391..53564    	 +	57	23097509	sspF	OB0054	-	small acid-soluble spore protein (minor alpha:beta-type SASP)	
55	 39.15 +1    53741..54583    	 +	280	23097510	-	OB0055	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	
56	 36.30       54651..55460    	 +	269	23097511	-	OB0056	-	transcriptional repressor of purine operon	
57	 42.96 +2    55623..55913    	 +	96	23097512	spoVG	OB0057	-	stage V sporulation protein G	
58	 38.45       56254..57621    	 +	455	23097513	-	OB0058	-	UDP-N-acetylglucosamine pyrophosphorylase (temperature sensitive cell division)	
59	 36.69       57651..58604    	 +	317	23097514	-	OB0059	-	ribose-phosphate pyrophosphokinase (PRPP synthetase)	
60	 35.65       58742..59389    	 +	215	23097515	rplY	OB0060	-	50S ribosomal protein L25	
61	 35.82       59594..60157    	 +	187	23097516	-	OB0061	-	stage V sporulation protein C (peptidyl-tRNA hydrolase (PTH))	
62	 32.03 -1    60241..60471    	 +	76	23097517	-	OB0062	-	hypothetical conserved protein	
63	 37.11       60559..64080    	 +	1173	23097518	-	OB0063	-	transcription-repair coupling factor (TRCF)	
64	 37.83       64225..64758    	 +	177	23097519	-	OB0064	-	stage V sporulation protein T (transcriptional regulator)	
65	 36.45       64893..66497    	 +	534	23097520	-	OB0065	-	low temperature requirement B protein	
66	 37.82       66494..67963    	 +	489	23097521	-	OB0066	-	hypothetical conserved protein	
67	 32.95       67960..68223    	 +	87	23097522	-	OB0067	-	hypothetical conserved protein	
68	 37.29       68280..68582    	 +	100	23097523	-	OB0068	-	hypothetical conserved protein	
69	 33.67       68579..69172    	 +	197	23097524	-	OB0069	-	hypothetical conserved protein	
70	 35.17       69179..69559    	 +	126	23097525	-	OB0070	-	cell division initiation protein	
71	 39.84 +1    69629..70012    	 +	127	23097526	-	OB0071	-	polyribonucleotide nucleotidyltransferase	
72	 37.91       70698..72227    	 -	509	23097527	-	OB0072	-	multidrug resistance protein	
73	 36.87       72217..72669    	 -	150	23097528	-	OB0073	-	transcriptional regulator (marR family)	
74	 38.01       73151..75607    	 +	818	23097529	-	OB0074	-	stage II sporulation protein E	
75	 38.19       75775..76515    	 +	246	23097530	-	OB0075	-	hypothetical conserved protein	
76	 38.26       76478..77410    	 +	310	23097531	-	OB0076	-	serine:threonine protein kinase	
77	 35.69       77467..78867    	 +	466	23097532	-	OB0077	-	cell-cycle protein	
78	 33.87       78879..79433    	 +	184	23097533	-	OB0078	-	hypoxanthine phosphoribosyltransferase	
79	 39.79 +1    79588..81615    	 +	675	23097534	-	OB0079	-	cell division protein (general stress protein)	
80	 42.38 +2    82211..83470    	 +	419	23097535	-	OB0080	-	recombinase for Bh.Int	
81	 34.11       83731..84498    	 +	255	23097536	-	OB0081	-	hypothetical conserved protein	
82	 38.28       84524..85393    	 +	289	23097537	-	OB0082	-	chaperonin (heat shock protein 33)	
83	 36.51       85418..86329    	 +	303	23097538	-	OB0083	-	protein secretion (post-translocation molecular chaperone)	
84	 41.53 +1    86428..87354    	 +	308	23097539	-	OB0084	-	cysteine synthase A	
85	 37.83       87477..88298    	 +	273	23097540	-	OB0085	-	dihydropteroate synthase	
86	 35.52       88301..88666    	 +	121	23097541	-	OB0086	-	dihydroneopterin aldolase	
87	 36.84       88663..89175    	 +	170	23097542	-	OB0087	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase	
88	 37.11       89569..91050    	 +	493	23097543	-	OB0088	-	lysine-tRNA ligase	
89	 32.33 -1   108544..109242   	 +	232	23097544	-	OB0089	-	cation-transporting ATPase	
90	 31.62 -1   109439..109906   	 +	155	23097545	-	OB0090	-	transcriptional repressor of class III stress genes	
91	 34.59      109929..110486   	 +	185	23097546	-	OB0091	-	hypothetical conserved protein	
92	 36.24      110483..111547   	 +	354	23097547	-	OB0092	-	creatine kinase	
93	 38.89 +1   111692..114121   	 +	809	23097548	-	OB0093	-	ATP-dependent Clp protease (ATP-binding subunit)	
94	 39.45 +1   114315..115688   	 +	457	23097549	-	OB0094	-	DNA repair protein	
95	 34.61      115768..116862   	 +	364	23097550	-	OB0095	-	hypothetical conserved protein	
96	 37.21      116986..118455   	 +	489	23097551	-	OB0096	-	glutamate-tRNA ligase	
97	 45.48 +2   118708..119028   	 +	106	23097552	-	OB0097	-	hypothetical protein	
98	 40.23 +1   119076..119756   	 +	226	23097553	cysE	OB0098	-	serine O-acetyltransferase	
99	 36.03      119737..121143   	 +	468	23097554	cysS	OB0099	-	cysteinyl-tRNA synthetase	
100	 38.37      121143..121559   	 +	138	23097555	-	OB0100	-	hypothetical conserved protein	

 
 35.64 MEAN 
 
 3.25  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.