IslandPath Analysis: Mycoplasma gallisepticum



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).



No rRNA data available

A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 31.65   STD DEV: 3.21
Mycoplasma gallisepticum R, complete genome - 0..996422
726 proteins

Pos	 %G+C  SD      Location		Strand	Length	PID	Gene	Synonym	Code	Product

1	 28.16     1890..2681     	 +	263	31544205	parA	MGA_0619	-	ParA/Soj	
2	 26.58 -1     2659..3147     	 +	162	31544206	-	MGA_0621	-	unique hypothetical	
3	 27.71 -1     3163..4548     	 +	461	31544207	dnaA	MGA_0622	-	DnaA	
4	 32.56        4744..5133     	 +	129	31544208	-	MGA_1322d	-	ABC transporter component	
5	 30.27        5130..6077     	 +	315	31544209	-	MGA_0625	-	MdlB-like	
6	 32.45        6369..8294     	 +	641	31544210	-	MGA_0626	-	MdlB-like	
7	 38.67 +2     8389..8538     	 +	49	31544211	rpL34	MGA_1323d	-	RpL34	
8	 25.64 -1     8535..8924     	 +	129	31544212	rnpA	MGA_0630	-	RnpA	
9	 34.81        8929..10080    	 +	383	31544213	yidC	MGA_0631	-	YidC	
10	 29.14       10077..10886    	 +	269	31544214	ksgA	MGA_0633	-	KsgA	
11	 29.26       10801..11586    	 +	261	31544215	-	MGA_0635	-	conserved hypothetical	
12	 29.89       11593..13248    	 +	551	31544216	argS	MGA_0636	-	ArgS	
13	 32.01       13218..14426    	 +	402	31544217	mnuA	MGA_0637	-	MnuA	
14	 34.69       14481..15215    	 -	244	31544218	glpF	MGA_0641	-	GlpF	
15	 34.37       15212..16753    	 -	513	31544219	glpK	MGA_0644	-	GlpK	
16	 33.91       16777..17997    	 -	406	31544220	-	MGA_0646	-	Glycerol 3-P dehydrogenase	
17	 33.64       18210..20486    	 -	758	31544221	-	MGA_0648	-	conserved hypothetical lipoprotein	
18	 33.14       20691..21203    	 -	170	31544222	-	MGA_0649	-	conserved hypothetical	
19	 31.16       21317..22144    	 +	275	31544223	-	MGA_0650	-	conserved hypothetical	
20	 35.95 +1    22141..23862    	 -	573	31544224	-	MGA_0652	-	predicted hydrolase	
21	 32.77       24273..28358    	 +	1361	31544225	-	MGA_0654	-	conserved hypothetical	
22	 32.87       28362..29861    	 +	499	31544226	phnL	MGA_0655	-	PhnL	
23	 35.29 +1    30232..30948    	 +	238	31544227	-	MGA_0656	-	unique hypothetical lipoprotein	
24	 32.91       31416..31889    	 +	157	31544228	-	MGA_0657	-	conserved hypothetical	
25	 32.24       31893..32441    	 +	182	31544229	hpt	MGA_0658	-	Hpt Hypoxanthine-guanine phosphoribosyltransferase	
26	 36.80 +1    32458..34764    	 +	768	31544230	ftsH	MGA_0659	-	FtsH	
27	 28.90       34780..35433    	 +	217	31544231	-	MGA_0661	-	conserved hypothetical	
28	 26.67 -1    35414..36313    	 +	299	31544232	-	MGA_0662	-	unique hypothetical	
29	 30.80       36362..36637    	 +	91	31544233	fruB	MGA_0664	-	FruB	
30	 34.03       36690..38690    	 +	666	31544234	tktA	MGA_0666	-	TktA	
31	 36.25 +1    38680..41352    	 +	890	31544235	secA	MGA_0670	-	SecA	
32	 34.26       41618..43873    	 +	751	31544236	-	MGA_0674	-	conserved hypothetical	
33	 34.78       43938..44768    	 +	276	31544237	-	MGA_0676	-	conserved hypothetical	
34	 32.37       44802..46565    	 +	587	31544238	-	MGA_0677	-	ABC transporter  ATP-binding protein	
35	 32.33       46565..47557    	 +	330	31544239	malF	MGA_0680	-	MalF	
36	 32.52       47532..48509    	 +	325	31544240	malG	MGA_0682	-	MalG	
37	 30.25       48701..49672    	 +	323	31544241	-	MGA_0683	-	MgpA-like	
38	 31.12       50461..52587    	 +	708	31544242	uvrB	MGA_0686	-	UvrB	
39	 32.12       52632..53789    	 +	385	31544243	pstS	MGA_0687	-	PstS	
40	 31.51       53771..55747    	 +	658	31544244	-	MGA_0689	-	phosphate transport system permease	
41	 32.52       55737..56717    	 +	326	31544245	pstB	MGA_0693	-	PstB	
42	 27.73 -1    56693..57406    	 +	237	31544246	phoU	MGA_0694	-	PhoU	
43	 34.21       57481..59649    	 -	722	31544247	nrdA	MGA_0695	-	NrdA	
44	 37.58 +1    59746..60216    	 -	156	31544248	nrdI	MGA_0696	-	NrdI	
45	 34.22       60204..61223    	 -	339	31544249	nrdF	MGA_0698	-	NrdF	
46	 33.22       61769..62638    	 +	289	31544250	thyA	MGA_0699	-	ThyA	
47	 30.39       62572..63591    	 +	339	31544251	FolA	MGA_0701	-	FolA	
48	 25.00 -2    63623..63826    	 -	67	31544252	-	MGA_0702	-	unique hypothetical	
49	 32.88       65212..66093    	 -	293	31544253	-	MGA_0704	-	conserved hypothetical	
50	 29.92       66331..66711    	 +	126	31544254	rpsJ	MGA_0705	-	RpsJ	
51	 36.01 +1    66743..67453    	 +	236	31544255	rplC	MGA_0707	-	RplC	
52	 31.92       67471..68109    	 +	212	31544256	rplD	MGA_0710	-	RplD	
53	 34.76       68088..68438    	 +	116	31544257	rplW	MGA_0711	-	RplW	
54	 38.38 +2    68485..69336    	 +	283	31544258	rplB	MGA_0712	-	RplB	
55	 31.44       69357..69620    	 +	87	31544259	rpsS	MGA_0714	-	RpsS	
56	 31.49       69631..70065    	 +	144	31544260	rplV	MGA_0716	-	RplV	
57	 35.84 +1    70062..70859    	 +	265	31544261	rpsC	MGA_0717	-	RpsC	
58	 37.89 +1    70865..71281    	 +	138	31544262	rplP	MGA_0721	-	RplP	
59	 28.39 -1    71278..71742    	 +	154	31544263	rpmC	MGA_0723	-	RpmC	
60	 36.05 +1    71748..72005    	 +	85	31544264	rpsQ	MGA_0725	-	RpsQ	
61	 37.31 +1    72006..72407    	 +	133	31544265	rplN	MGA_0726	-	RplN	
62	 34.55       72418..72747    	 +	109	31544266	rplX	MGA_0728	-	RplX	
63	 34.40       72744..73304    	 +	186	31544267	rplE	MGA_0729	-	RplE	
64	 37.20 +1    73276..73482    	 +	68	31544268	rpsN	MGA_0732	-	RpsN	
65	 33.33       73506..73907    	 +	133	31544269	rpsH	MGA_0733	-	RpsH	
66	 33.88       73926..74477    	 +	183	31544270	rplF	MGA_0734	-	RplF	
67	 37.50 +1    74484..74843    	 +	119	31544271	rplR	MGA_0735	-	RplR	
68	 36.99 +1    74854..75537    	 +	227	31544272	rpsE	MGA_0737	-	RpsE	
69	 33.33       75550..75996    	 +	148	31544273	rplO	MGA_0739	-	RplO	
70	 36.21 +1    76009..77505    	 +	498	31544274	recY	MGA_0740	-	SecY	
71	 33.18       77481..78143    	 +	220	31544275	adk	MGA_0743	-	Adk	
72	 32.40       78154..78906    	 +	250	31544276	map	MGA_0745	-	Map	
73	 35.60 +1    79087..80058    	 +	323	31544277	mdh	MGA_0746	-	Mdh	
74	 28.65       83639..87079    	 -	1146	31544278	-	MGA_0754	-	conserved hypothetical	
75	 33.00       87070..88560    	 +	496	31544279	lysU	MGA_0753	-	LysU	
76	 34.13       88597..89727    	 +	376	31544280	dnaJ	MGA_1324d	-	DnaJ	
77	 29.33       89748..90497    	 +	249	31544281	-	MGA_0758	-	unique hypothetical	
78	 34.56       90656..91714    	 +	352	31544282	-	MGA_0760	-	unique hypothetical	
79	 28.19 -1    91691..92506    	 -	271	31544283	-	MGA_0762	-	unique hypothetical	
80	 34.08       92584..94329    	 +	581	31544284	ptsA	MGA_0763	-	PtsA	
81	 28.23 -1    94407..94955    	 +	182	31544285	-	MGA_0765	-	conserved hypothetical	
82	 28.94       95390..95662    	 +	90	31544286	rlsO	MGA_0766	-	RlsO	
83	 32.05       95678..97474    	 +	598	31544287	-	MGA_0768	-	conserved hypothetical	
84	 30.44       97482..99449    	 +	655	31544288	ftsK	MGA_0771	-	FtsK	
85	 32.42       99453..99782    	 +	109	31544289	trxA	MGA_0774	-	TrxA	
86	 28.02 -1    99791..102406   	 +	871	31544290	-	MGA_0777	-	conserved hypothetical	
87	 35.01 +1   102400..105264   	 +	954	31544291	uvrA	MGA_0778	-	UvrA	
88	 33.45      105297..106190   	 +	297	31544292	tsf	MGA_0782	-	Tsf	
89	 32.65      106196..106924   	 +	242	31544293	pyrH	MGA_0783	-	PyrH	
90	 30.66      106928..107488   	 +	186	31544294	frr	MGA_0784	-	Frr	
91	 30.33      107476..108606   	 +	376	31544295	cdsA	MGA_0785	-	CdsA	
92	 30.80      108611..109717   	 +	368	31544296	dxr	MGA_0787	-	Dxr	
93	 36.37 +1   109714..110535   	 +	273	31544297	-	MGA_0789	-	predicted protease	
94	 30.78      110537..115042   	 +	1501	31544298	polC	MGA_0791	-	PolC	
95	 31.60      115046..118444   	 +	1132	31544299	uvrD	MGA_0793	-	UvrD	
96	 27.94 -1   119199..120680   	 -	493	31544300	-	MGA_0797	-	unique hypothetical	
97	 28.96      120695..122638   	 -	647	31544301	-	MGA_0798	-	AprE-like	
98	 28.05 -1   122995..124470   	 -	491	31544302	-	MGA_0800	-	unique hypothetical	
99	 27.96 -1   124460..125743   	 -	427	31544303	-	MGA_0801	-	AprE-like	
100	 27.76 -1   125683..126453   	 -	256	31544304	-	MGA_0802	-	unique hypothetical	

 
 31.65 MEAN 
 
 3.21  STD DEV 




Last Updated: Sept 17 2004 (Note: update adds new organisms but does not affect the existing records)
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.