Rickettsia akari str. Hartford, complete genome NC_009881 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 157826125 Common - hypothetical protein A1C_05500 1 None None None 157825401 Common hscA chaperone protein HscA A1C_01475 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 157825339 Common - Multidrug resistance protein B A1C_01105 188 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 157825676 Common - hypothetical protein A1C_02990 1 None None None 157825493 Common prfB peptide chain release factor 2 A1C_01970 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 157825450 Common - Extragenic suppressor protein SuhB A1C_01755 158 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 157825776 Common - Phosphomannomutase A1C_03535 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 157825930 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase A1C_04350 115 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 157826379 Common - Proline/betaine transporter A1C_06855 124 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 157825454 Common - Multidrug resistance protein A A1C_01775 149 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 157825718 Common sucC succinyl-CoA synthetase subunit beta A1C_03220 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 157825129 Common - O-antigen export system permease protein RfbA A1C_00020 108 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 157826149 Common trmE tRNA modification GTPase TrmE A1C_05630 225 COG0486 ThdF, Predicted GTPase General function prediction only 157826055 Common rpmC 50S ribosomal protein L29 A1C_05065 1 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 157825699 Common - hypothetical protein A1C_03125 6 None None None 157825429 Common - hypothetical protein A1C_01650 1 None None None 157825668 Common - hypothetical protein A1C_02950 19 None None None 157825534 Common - cysQ protein A1C_02205 188 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 157825242 Common - 190 kDa antigen precursor A1C_00605 217 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 157825343 Common - Outer membrane protein omp1 A1C_01125 159 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 157825891 Common - hypothetical protein A1C_04150 1 None None None 157825361 Common - hypothetical protein A1C_01275 1 None None None 157825942 Common - hypothetical protein A1C_04410 116 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 157825820 Common rho transcription termination factor Rho A1C_03775 206 COG1158 Rho, Transcription termination factor Transcription 157825265 Common alr alanine racemase A1C_00720 1 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 157826322 Common - Ribosomal large subunit pseudouridine synthase, RluD subfamily protein A1C_06555 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 157826169 Common - hypothetical protein A1C_05730 1 COG5510 COG5510, Predicted small secreted protein Function unknown 157826148 Pathogen - hypothetical protein A1C_05625 1 None None None 157825280 Common - TrbL/VirB6 plasmid Conjugative transfer protein A1C_00810 8 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 157826162 Common rplU 50S ribosomal protein L21 A1C_05695 208 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 157825537 Common - ribose-5-phosphate isomerase B A1C_02230 127 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 157826290 Pathogen - 190-KDa cell surface antigen A1C_06385 1 None None None 157825547 Common - cationic amino acid transporter-1 A1C_02290 182 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 157825426 Pathogen - hypothetical protein A1C_01635 1 None None None 157825862 Common - aromatic acid decarboxylase A1C_04005 151 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 157825788 Common - hypothetical protein A1C_03595 40 COG1396 HipB, Predicted transcriptional regulators Transcription 157825512 Common - virB10 protein A1C_02065 58 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 157826276 Common - Maf-like protein A1C_06305 186 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 157825256 Pathogen - hypothetical protein A1C_00675 1 None None None 157825626 Common - hypothetical protein A1C_02715 1 None None None 157825654 Common - Antitoxin of toxin-antitoxin system StbD A1C_02880 2 None None None 157826335 Common - hypothetical protein A1C_06620 2 None None None 157825789 Common - Ribonuclease BN, putative A1C_03600 125 COG1295 Rbn, Predicted membrane protein Function unknown 157825161 Pathogen - hypothetical protein A1C_00190 1 None None None 157825186 Common - transposase IS200-family protein A1C_00325 12 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826271 Common - Iojap-related protein A1C_06280 195 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 157825297 Common - hypothetical protein A1C_00895 14 COG3660 COG3660, Predicted nucleoside-diphosphate-sugar epimerase Cell envelope biogenesis, outer membrane 157825459 Common murC UDP-N-acetylmuramate--L-alanine ligase A1C_01800 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 157826306 Common - DAP2-like protein A1C_06475 10 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 157825484 Common - putative monovalent cation/H+ antiporter subunit G A1C_01925 17 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 157826353 Common - hypothetical protein A1C_06710 40 COG3577 COG3577, Predicted aspartyl protease General function prediction only 157825597 Pathogen rpsD 30S ribosomal protein S4 A1C_02560 1 None None None 157825209 Common - ADP,ATP carrier protein A1C_00440 6 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 157826237 Common - Type IV secretion/conjugal transfer ATPase, VirB4 family protein A1C_06080 42 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 157825857 Pathogen - Predicted NTPase A1C_03980 1 None None None 157826329 Pathogen - hypothetical protein A1C_06590 1 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 157825781 Common - polynucleotide phosphorylase/polyadenylase A1C_03560 237 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 157825913 Pathogen - hypothetical protein A1C_04265 2 None None None 157825873 Common - hypothetical protein A1C_04060 2 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 157825648 Pathogen - CTP synthetase A1C_02845 1 None None None 157826113 Common - hypothetical protein A1C_05440 23 COG5528 COG5528, Predicted integral membrane protein Function unknown 157825736 Common - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase A1C_03310 211 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 157825495 Pathogen - putative phage-related protein A1C_01980 3 None None None 157826194 Common - surfeit locus protein 1 A1C_05855 38 COG3346 COG3346, Uncharacterized conserved protein Function unknown 157825372 Common dnaK molecular chaperone DnaK A1C_01330 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 157825927 Common - hypothetical protein A1C_04335 1 None None None 157825274 Common - Type IV secretory pathway, VirB3-like protein A1C_00780 17 COG3702 VirB3, Type IV secretory pathway, VirB3 components Intracellular trafficking and secretion 157825279 Common - TrbL/VirB6 plasmid Conjugative transfer protein A1C_00805 21 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 157825802 Common - folylpolyglutamate synthase A1C_03665 217 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 157825416 Common - S-adenosylmethionine:tRNA ribosyltransferase-isomerase A1C_01585 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 157825683 Common - hypothetical protein A1C_03025 1 None None None 157825163 Common - Folate synthesis bifunctional protein A1C_00200 3 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 157826287 Common - Outer memberane protein rOmpA A1C_06370 1 None None None 157826138 Common lpxK tetraacyldisaccharide 4'-kinase A1C_05575 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 157825529 Common - hypothetical protein A1C_02180 2 None None None 157825721 Common - hypothetical protein A1C_03235 12 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 157825962 Common - Magnesium transporter A1C_04520 161 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 157825694 Pathogen - Membrane-fusion protein component of the RND family transporter A1C_03100 1 None None None 157826304 Common uvrA excinuclease ABC subunit A A1C_06465 241 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 157825731 Pathogen - hypothetical protein A1C_03285 1 None None None 157825504 Common - NADH dehydrogenase subunit N A1C_02025 203 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 157825600 Common - Putative lyase A1C_02575 13 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 157826075 Common - ampG protein A1C_05175 99 None None None 157825333 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A A1C_01075 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 157825345 Common nusB transcription antitermination protein NusB A1C_01135 60 COG0781 NusB, Transcription termination factor Transcription 157825892 Common - hypothetical protein A1C_04155 44 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 157825170 Common - hypothetical protein A1C_00245 1 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 157826027 Pathogen - hypothetical protein A1C_04905 1 None None None 157825753 Pathogen - hypothetical protein A1C_03395 1 None None None 157825988 Common dnaA chromosomal replication initiation protein A1C_04690 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 157825239 Pathogen - hypothetical protein A1C_00590 1 None None None 157826108 Pathogen - hypothetical protein A1C_05405 1 None None None 157826235 Common - Sec-independent protein translocase protein TatC A1C_06070 199 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 157826229 Common - S-adenosylmethionine synthetase A1C_06040 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 157826253 Common - hypothetical protein A1C_06160 1 None None None 157825750 Common - Glycosyltransferase A1C_03380 200 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 157825816 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 A1C_03755 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 157826243 Common - NADH dehydrogenase subunit K A1C_06110 163 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 157826176 Common - hypothetical protein A1C_05765 3 None None None 157825641 Common - hypothetical protein A1C_02790 1 None None None 157826153 Pathogen - hypothetical protein A1C_05650 1 None None None 157825137 Pathogen - hypothetical protein A1C_00060 1 None None None 157825599 Common - protoheme IX farnesyltransferase A1C_02570 167 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 157825579 Common - Membrane protease subunits A1C_02460 218 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 157826377 Common - hypothetical protein A1C_06845 1 None None None 157826343 Common - tRNA pseudouridine synthase A A1C_06660 234 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 157825610 Common - 3-methyladenine DNA glycosylase A1C_02635 6 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 157826278 Common xerC site-specific tyrosine recombinase XerC A1C_06315 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 157825570 Common - hypothetical protein A1C_02415 1 None None None 157825901 Pathogen - Ankyrin repeat A1C_04205 1 None None None 157825247 Pathogen - hypothetical protein A1C_00630 1 None None None 157825305 Pathogen - hypothetical protein A1C_00935 1 None None None 157825315 Common nusG transcription antitermination protein NusG A1C_00985 216 COG0250 NusG, Transcription antiterminator Transcription 157826086 Common - Exodeoxyribonuclease III A1C_05230 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 157826363 Common - Type I restriction-modification system methyltransferase subunit A1C_06760 1 None None None 157825795 Common - hypothetical protein A1C_03630 1 None None None 157825778 Common - hypothetical protein A1C_03545 1 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 157825590 Common - hypothetical protein A1C_02525 2 None None None 157826077 Common - ATP-dependent RNA helicase RhlE A1C_05185 242 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 157825957 Common acpS 4'-phosphopantetheinyl transferase A1C_04495 153 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 157826283 Common - Parvulin-like peptidyl-prolyl isomerase A1C_06340 99 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 157825380 Common - Cytochrome c oxidase subunit III A1C_01370 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 157825360 Common - hypothetical protein A1C_01270 1 None None None 157826210 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase A1C_05935 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 157825396 Common - Cell surface antigen-like protein Sca8 A1C_01450 1 None None None 157825976 Common - hypothetical protein A1C_04610 2 None None None 157825634 Common lysK lysyl-tRNA synthetase A1C_02755 77 COG1384 LysS, Lysyl-tRNA synthetase (class I) Translation, ribosomal structure and biogenesis 157826316 Common - hypothetical protein A1C_06525 1 None None None 157825831 Common - ADP,ATP carrier protein A1C_03840 7 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 157825448 Common pleD response regulator PleD A1C_01745 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 157825769 Common nrdF ribonucleotide-diphosphate reductase subunit beta A1C_03485 159 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 157825253 Common - VacJ lipoprotein precursor A1C_00660 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 157826049 Common rpsH 30S ribosomal protein S8 A1C_05035 231 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 157826380 Common - coproporphyrinogen III oxidase A1C_06860 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 157825840 Common - hypothetical protein A1C_03895 1 COG5622 COG5622, Protein required for attachment to host cells Cell motility and secretion 157826263 Pathogen - hypothetical protein A1C_06220 1 None None None 157825704 Common - DNA polymerase III subunit beta A1C_03150 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 157826040 Common - 30S ribosomal protein S11 A1C_04990 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 157826037 Common rpsT 30S ribosomal protein S20 A1C_04975 152 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 157826088 Common engA GTP-binding protein EngA A1C_05240 231 COG1160 COG1160, Predicted GTPases General function prediction only 157825476 Common - Pyruvate dehydrogenase e1 component, alpha subunit precursor A1C_01885 162 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 157826066 Common - tRNA/rRNA methyltransferase A1C_05120 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 157825855 Common - Iron-sulfur cluster assembly transcription factor IscR A1C_03970 134 COG1959 COG1959, Predicted transcriptional regulator Transcription 157825881 Common - hypothetical protein A1C_04100 2 None None None 157825607 Common rimM 16S rRNA-processing protein A1C_02610 113 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 157825742 Common - hypothetical protein A1C_03340 1 None None None 157825379 Pathogen - hypothetical protein A1C_01365 1 None None None 157825975 Pathogen - hypothetical protein A1C_04605 1 None None None 157825808 Common - hypothetical protein A1C_03715 1 None None None 157825944 Common - Antitoxin of toxin-antitoxin system StbD A1C_04420 12 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 157825219 Pathogen - hypothetical protein A1C_00490 1 None None None 157826217 Pathogen - Predicted ATPase A1C_05980 1 None None None 157825582 Common - Plasmid maintenance system antidote protein A1C_02475 50 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 157825924 Common - Large extracellular alpha-helical protein A1C_04320 77 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 157826180 Common - PemK-like growth inhibitor A1C_05785 32 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 157825838 Common - DNA-damage-inducible protein J A1C_03885 20 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 157825289 Common secF preprotein translocase subunit SecF A1C_00855 219 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 157825296 Common - Nucleotidyltransferase A1C_00890 1 None None None 157826297 Common - Ferredoxin A1C_06430 167 COG4231 COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Energy production and conversion 157825662 Common - ampG protein A1C_02920 109 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 157825478 Common - GTP-binding protein TypA A1C_01895 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 157825848 Pathogen - hypothetical protein A1C_03935 1 None None None 157826323 Common - hypothetical protein A1C_06560 1 None None None 157825226 Pathogen - hypothetical protein A1C_00525 1 None None None 157825797 Common - pyruvate phosphate dikinase A1C_03640 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 157825982 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase A1C_04660 214 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 157826374 Pathogen - hypothetical protein A1C_06815 1 None None None 157826312 Pathogen - hypothetical protein A1C_06505 1 None None None 157825520 Pathogen - hypothetical protein A1C_02125 1 None None None 157825545 Common - hypothetical protein A1C_02280 2 None None None 157826382 Common - hypothetical protein A1C_06870 97 COG1981 COG1981, Predicted membrane protein Function unknown 157825539 Pathogen - Probable antitoxin of toxin-antitoxin stability system A1C_02250 1 None None None 157826159 Common - hypothetical protein A1C_05680 1 None None None 157826164 Common tatA twin argininte translocase protein A A1C_05705 1 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 157825363 Common - Periplasmic divalent cation tolerance protein A1C_01285 113 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 157825888 Common - dihydrolipoamide dehydrogenase A1C_04135 247 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 157826102 Common - methionyl-tRNA synthetase A1C_05330 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825572 Pathogen - hypothetical protein A1C_02425 1 None None None 157825510 Common - VirB8 protein A1C_02055 25 COG3736 VirB8, Type IV secretory pathway, component VirB8 Intracellular trafficking and secretion 157826150 Common - NAD-specific glutamate dehydrogenase A1C_05635 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 157825337 Common pyrH uridylate kinase A1C_01095 227 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 157825941 Common mraW S-adenosyl-methyltransferase MraW A1C_04405 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 157825276 Common - TrbL/VirB6 plasmid Conjugative transfer protein A1C_00790 7 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 157825408 Pathogen def peptide deformylase A1C_01545 1 None None None 157825898 Pathogen - isopentenyl pyrophosphate isomerase A1C_04190 1 None None None 157825584 Common - CapD protein A1C_02485 169 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 157825127 Common - Thioredoxin A1C_00010 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 157825834 Common - hypothetical protein A1C_03865 3 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 157825452 Common - phosphatidylserine decarboxylase A1C_01765 96 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 157825351 Common - ABC-type multidrug transport system, ATPase and permease components A1C_01165 1 COG5508 COG5508, Uncharacterized conserved small protein Function unknown 157825376 Common - hypothetical protein A1C_01350 1 None None None 157826053 Common rplN 50S ribosomal protein L14 A1C_05055 246 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 157825813 Pathogen - hypothetical protein A1C_03740 1 None None None 157826117 Pathogen - hypothetical protein A1C_05460 1 None None None 157825592 Common - Glycosyltransferase A1C_02535 180 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 157825902 Pathogen - hypothetical protein A1C_04210 1 None None None 157825643 Pathogen - hypothetical protein A1C_02800 1 None None None 157825168 Common - Transcriptional regulator A1C_00235 83 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 157825964 Common - Proline/betaine transporter A1C_04540 1 None None None 157825695 Common - Membrane-fusion protein component of the RND family transporter A1C_03105 25 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 157825929 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase A1C_04345 1 None None None 157825370 Common - Cation transport regulator ChaB A1C_01320 20 COG4572 ChaB, Putative cation transport regulator General function prediction only 157825508 Common - VirB8 protein A1C_02045 7 COG3736 VirB8, Type IV secretory pathway, component VirB8 Intracellular trafficking and secretion 157825391 Pathogen - hypothetical protein A1C_01425 1 None None None 157825706 Common leuS leucyl-tRNA synthetase A1C_03160 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825497 Common - transposase IS200-family protein A1C_01990 11 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826096 Common - hypothetical protein A1C_05290 1 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 157825978 Common - Succinyl-CoA:3-ketoacid-coenzyme A transferase A1C_04620 3 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 157826174 Common - DNA modification methylase A1C_05755 3 None None None 157825809 Pathogen - hypothetical protein A1C_03720 1 None None None 157825759 Pathogen - hypothetical protein A1C_03435 1 None None None 157826070 Pathogen - Toxin of toxin-antitoxin system A1C_05140 1 None None None 157825290 Common - NADH dehydrogenase I chain F A1C_00860 164 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 157825200 Common - putative carbamate kinase A1C_00395 207 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 157826115 Common - Ribosomal-protein-alanine acetyltransferase A1C_05450 90 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 157825387 Pathogen - hypothetical protein A1C_01405 1 None None None 157825723 Common - Predicted membrane protein A1C_03245 8 COG1238 COG1238, Predicted membrane protein Function unknown 157826337 Common - hypothetical protein A1C_06630 1 None None None 157825680 Common - hypothetical protein A1C_03010 136 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 157826285 Pathogen - 190-KDa cell surface antigen A1C_06360 1 None None None 157826230 Pathogen - hypothetical protein A1C_06045 1 None None None 157825282 Pathogen - Toxin of toxin-antitoxin system A1C_00820 1 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 157825681 Common - Cytochrome c oxidase polypeptide I A1C_03015 171 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 157826146 Common - hypothetical protein A1C_05615 1 None None None 157825624 Common xerD site-specific tyrosine recombinase XerD A1C_02705 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 157825188 Common rpsF 30S ribosomal protein S6 A1C_00335 1 None None None 157825652 Common folE GTP cyclohydrolase I A1C_02870 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 157826136 Common - bacterioferritin comigratory protein A1C_05565 222 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 157826239 Common - tellurium resistance protein TerC A1C_06090 89 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 157825556 Common - Proline/betaine transporter A1C_02335 125 None None None 157826001 Common - 50S ribosomal protein L35 A1C_04765 96 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 157825822 Pathogen - hypothetical protein A1C_03795 1 None None None 157825678 Common - hypothetical protein A1C_03000 48 COG2887 COG2887, RecB family exonuclease DNA replication, recombination, and repair 157826330 Common - hypothetical protein A1C_06595 67 COG1636 COG1636, Uncharacterized protein conserved in bacteria Function unknown 157825258 Common - hypothetical protein A1C_00685 1 None None None 157826272 Common - hypothetical protein A1C_06285 48 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 157826020 Pathogen - hypothetical protein A1C_04870 1 None None None 157825875 Common nusA transcription elongation factor NusA A1C_04070 216 COG0195 NusA, Transcription elongation factor Transcription 157825321 Common - DNA-directed RNA polymerase subunit beta' A1C_01015 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 157825860 Common - delta-aminolevulinic acid dehydratase A1C_03995 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 157826200 Common - hypothetical protein A1C_05885 34 COG3761 COG3761, NADH:ubiquinone oxidoreductase 17.2 kD subunit Energy production and conversion 157825734 Common - hypothetical protein A1C_03300 153 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 157825783 Common truB tRNA pseudouridine synthase B A1C_03570 244 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 157825981 Pathogen mraY phospho-N-acetylmuramoyl-pentapeptide-transferase A1C_04655 1 None None None 157825130 Common - putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase A1C_00025 116 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 157826068 Common fumC fumarate hydratase A1C_05130 233 COG0114 FumC, Fumarase Energy production and conversion 157825611 Common - hypothetical protein A1C_02640 185 COG0759 COG0759, Uncharacterized conserved protein Function unknown 157825139 Pathogen - hypothetical protein A1C_00080 1 None None None 157826013 Common - hypothetical protein A1C_04835 5 None None None 157826345 Common dnaG DNA primase A1C_06670 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 157825249 Common - 3-deoxy-D-manno-octulosonic-acid transferase A1C_00640 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 157826084 Common xseA exodeoxyribonuclease VII large subunit A1C_05220 204 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 157826127 Common - hypothetical protein A1C_05510 219 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 157825228 Common - Putative surface antigen A1C_00535 6 None None None 157825394 Pathogen - hypothetical protein A1C_01440 1 None None None 157825268 Common - ABC transporter permease protein A1C_00735 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 157825523 Common - Cell surface antigen-like protein Sca7 A1C_02140 1 None None None 157825466 Common - hypothetical protein A1C_01835 2 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 157825192 Common - tRNA(Ile)-lysidine synthetase TilS A1C_00355 210 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 157825446 Pathogen - hypothetical protein A1C_01735 1 None None None 157825237 Common - Proline/betaine transporter A1C_00580 134 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 157825270 Common - hypothetical protein A1C_00745 1 None None None 157825335 Pathogen frr ribosome recycling factor A1C_01085 1 None None None 157825639 Common - hypothetical protein A1C_02780 1 COG4374 COG4374, Uncharacterized protein conserved in bacteria Function unknown 157826050 Common rpsN 30S ribosomal protein S14 A1C_05040 199 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 157825440 Common - hypothetical protein A1C_01705 2 None None None 157825954 Pathogen - hypothetical protein A1C_04480 1 None None None 157826219 Common - hypothetical protein A1C_05990 1 None None None 157826030 Common groES co-chaperonin GroES A1C_04930 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 157826022 Pathogen - hypothetical protein A1C_04880 1 COG3070 TfoX, Regulator of competence-specific genes Transcription 157825318 Common rplJ 50S ribosomal protein L10 A1C_01000 213 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 157825299 Common - protease activity modulator HflK A1C_00905 156 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 157826189 Common - hypothetical protein A1C_05830 1 None None None 157826245 Common - NADH dehydrogenase subunit M A1C_06120 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 157826365 Common - Na+/H+ antiporter NhaA A1C_06770 92 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 157825673 Common - Signal peptide peptidase SppA A1C_02975 153 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 157826375 Common - Oxidoreductase A1C_06835 154 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 157826301 Common - 17 kD surface antigen precursor A1C_06450 27 COG4520 LipA, Surface antigen Cell envelope biogenesis, outer membrane 157825471 Common - ribonuclease E A1C_01860 184 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 157825377 Common holA DNA polymerase III subunit delta A1C_01355 29 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 157825740 Common - hypothetical protein A1C_03330 70 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 157826204 Common - hypothetical protein A1C_05905 45 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 157825744 Common - hypothetical protein A1C_03350 1 None None None 157825666 Common - intracellular septation protein A A1C_02940 92 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 157825221 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein A1C_00500 163 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 157825995 Common - Acetyltransferase A1C_04735 1 None None None 157826029 Common groEL chaperonin GroEL A1C_04925 243 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 157825310 Common - amino acid ABC transporter permease protein A1C_00960 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 157825806 Pathogen - hypothetical protein A1C_03705 1 None None None 157826079 Pathogen ksgA dimethyladenosine transferase A1C_05195 1 None None None 157826220 Common - Rod shape-determining protein MreC A1C_05995 157 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 157825563 Common hslU ATP-dependent protease ATP-binding subunit A1C_02370 210 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 157825431 Common - hypothetical protein A1C_01660 1 None None None 157825456 Common - hypothetical protein A1C_01785 1 None None None 157825836 Common - hypothetical protein A1C_03875 2 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 157825762 Common - Carbonic anhydrase/Acetyltransferase, isoleucine patch superfamily protein A1C_03450 39 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 157826261 Common - dihydrolipoamide dehydrogenase A1C_06210 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 157825632 Common - Transposase IS982 family protein A1C_02745 16 None None None 157825357 Common - DNA polymerase III subunit delta' A1C_01225 43 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 157825199 Common - hypothetical protein A1C_00390 91 COG1565 COG1565, Uncharacterized conserved protein Function unknown 157825464 Pathogen - hypothetical protein A1C_01825 1 None None None 157825146 Pathogen - hypothetical protein A1C_00115 1 None None None 157825709 Common - Phosphatidate cytidylyltransferase A1C_03175 214 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 157825255 Common - transposase IS200-family protein A1C_00670 10 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826331 Common - Proline/betaine transporter A1C_06600 105 None None None 157825486 Common - Heme exporter protein B A1C_01935 2 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 157825679 Pathogen - hypothetical protein A1C_03005 1 None None None 157825842 Common - tryptophanyl-tRNA synthetase A1C_03905 228 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825939 Common - Penicillin-binding protein A1C_04395 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 157826042 Common adk adenylate kinase A1C_05000 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 157826318 Common obgE GTPase ObgE A1C_06535 249 COG0536 Obg, Predicted GTPase General function prediction only 157826039 Common - DNA-directed RNA polymerase subunit alpha A1C_04985 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 157825210 Common - Sugar phosphate permease A1C_00445 112 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 157826332 Common - Proline/betaine transporter A1C_06605 119 None None None 157825558 Common - Alkaline protease secretion ATP-binding protein AprD A1C_02345 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 157826044 Common rplO 50S ribosomal protein L15 A1C_05010 122 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 157825183 Common - Antitoxin of toxin-antitoxin system StbD A1C_00310 1 None None None 157826170 Common - endonuclease III A1C_05735 237 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 157826325 Common - bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase A1C_06570 227 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 157826134 Common - Integration host factor alpha-subunit A1C_05555 79 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 157825181 Common - zinc/manganese ABC transporter substrate binding protein A1C_00300 23 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 157826188 Common - hypothetical protein A1C_05825 1 None None None 157826302 Common - hypothetical protein A1C_06455 35 COG1881 COG1881, Phospholipid-binding protein General function prediction only 157826093 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase A1C_05265 211 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 157826340 Pathogen - hypothetical protein A1C_06645 1 None None None 157825785 Common - Cell surface antigen A1C_03580 7 None None None 157825205 Common - hypothetical protein A1C_00420 2 None None None 157826372 Common mutL DNA mismatch repair protein A1C_06805 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 157825519 Pathogen - Cell surface antigen-like protein Sca7 A1C_02120 1 None None None 157825993 Common - Bicyclomycin resistance protein A1C_04715 169 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 157825540 Common - Probable toxin of toxin-antitoxin system A1C_02255 4 COG4115 COG4115, Uncharacterized protein conserved in bacteria Function unknown 157825149 Pathogen - Cell surface antigen-like protein Sca10 A1C_00130 1 None None None 157825421 Common - Cytochrome d ubiquinol oxidase subunit I A1C_01610 163 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 157825819 Common - Putative methyltransferase A1C_03770 26 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 157825574 Common gltX glutamyl-tRNA synthetase A1C_02435 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 157825645 Common - malate dehydrogenase A1C_02825 194 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 157825150 Pathogen - Cell surface antigen-like protein Sca10 A1C_00135 1 None None None 157825635 Common - Predicted permease A1C_02760 108 COG0679 COG0679, Predicted permeases General function prediction only 157825757 Common - ATP-dependent protease La A1C_03415 210 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 157826072 Pathogen - hypothetical protein A1C_05150 1 None None None 157825522 Common - transposase IS200-family protein A1C_02135 11 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157825498 Common - Rod shape-determining protein RodA A1C_01995 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 157825438 Common - Histidine kinase sensor protein A1C_01695 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 157825576 Common - hypothetical protein A1C_02445 1 None None None 157825235 Common - OmpW family outer-membrane protein A1C_00570 8 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 157825896 Common - hypothetical protein A1C_04175 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 157825461 Common ddl D-alanine--D-alanine ligase A1C_01810 213 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 157825202 Common - putative inner membrane protein translocase component YidC A1C_00405 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 157826213 Common - hypothetical protein A1C_05960 4 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 157825919 Pathogen - hypothetical protein A1C_04295 1 None None None 157825967 Common secD preprotein translocase subunit SecD A1C_04565 216 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 157825984 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase A1C_04670 212 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 157826190 Common - hypothetical protein A1C_05835 7 None None None 157825442 Common rplM 50S ribosomal protein L13 A1C_01715 215 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 157826008 Pathogen - hypothetical protein A1C_04800 1 None None None 157825827 Pathogen - Microcin C7 resistance protein A1C_03820 1 None None None 157825153 Pathogen - Cell surface antigen-like protein Sca10 A1C_00150 1 None None None 157825772 Common - transposase IS200-family protein A1C_03515 15 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157825728 Common - hypothetical protein A1C_03270 1 None None None 157825687 Common - hypothetical protein A1C_03045 1 None None None 157826294 Common - hypothetical protein A1C_06415 1 None None None 157826274 Common - Phage-related transcriptional regulator A1C_06295 9 COG1476 COG1476, Predicted transcriptional regulators Transcription 157826121 Common - hypothetical protein A1C_05480 1 None None None 157825501 Common - Toxin of toxin-antitoxin system VapC A1C_02010 1 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 157826091 Pathogen - hypothetical protein A1C_05255 1 None None None 157826257 Common - F0F1 ATP synthase subunit beta A1C_06190 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 157826031 Common - hypothetical protein A1C_04945 1 None None None 157826307 Common - MFS type sugar transporter A1C_06480 107 None None None 157826143 Pathogen - hypothetical protein A1C_05600 1 None None None 157826119 Common - hypothetical protein A1C_05470 2 None None None 157825158 Pathogen - hypothetical protein A1C_00175 1 None None None 157825566 Common - hypothetical protein A1C_02385 1 None None None 157826128 Common - Cytochrome c-type biogenesis protein CcmF A1C_05515 121 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 157826098 Common - hypothetical protein A1C_05300 1 None None None 157825356 Common - DNA-binding protein HU A1C_01220 198 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 157826165 Common - ABC-type transport systems periplasmic component A1C_05710 10 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 157825166 Common - hypothetical protein A1C_00225 37 COG4797 COG4797, Predicted regulatory domain of a methyltransferase General function prediction only 157825906 Pathogen - Acetyltransferase A1C_04230 3 None None None 157825261 Pathogen - hypothetical protein A1C_00700 1 None None None 157825588 Pathogen - hypothetical protein A1C_02505 1 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 157826172 Common - Serine esterase A1C_05745 68 COG0400 COG0400, Predicted esterase General function prediction only 157825365 Common - dihydrolipoamide acetyltransferase A1C_01295 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 157825417 Pathogen - hypothetical protein A1C_01590 1 None None None 157826339 Pathogen truA tRNA pseudouridine synthase A A1C_06640 1 None None None 157825886 Common - Ribonuclease D A1C_04125 115 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 157825323 Common - leucyl aminopeptidase A1C_01025 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 157825910 Common - transposase Tn5 A1C_04250 9 None None None 157825818 Common - Single-stranded-DNA-specific exonuclease RecJ A1C_03765 195 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 157825444 Pathogen - hypothetical protein A1C_01725 1 None None None 157825533 Common - hypothetical protein A1C_02200 1 None None None 157825530 Common - hypothetical protein A1C_02185 15 None None None 157825410 Pathogen - hypothetical protein A1C_01555 1 None None None 157826232 Common - UDP-glucose 6-dehydrogenase A1C_06055 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 157825586 Common - hypothetical protein A1C_02495 2 COG1887 TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC Cell envelope biogenesis, outer membrane 157825707 Common - Ribonuclease D A1C_03165 79 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 157825419 Common - Multidrug resistance ABC transporter ATP-binding protein A1C_01600 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 157826222 Common - hypothetical protein A1C_06005 40 COG0795 COG0795, Predicted permeases General function prediction only 157825700 Common dapF diaminopimelate epimerase A1C_03130 197 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 157825403 Common rnhB ribonuclease HII A1C_01485 209 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 157825212 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA A1C_00455 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 157825932 Common - Nitrogen assimilation regulatory protein NtrX A1C_04360 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 157825766 Pathogen - ribonucleotide-diphosphate reductase subunit alpha A1C_03470 1 None None None 157826059 Common rpsS 30S ribosomal protein S19 A1C_05085 244 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 157826311 Pathogen - hypothetical protein A1C_06500 1 None None None 157826384 Common hemE uroporphyrinogen decarboxylase A1C_06880 178 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 157825227 Pathogen - hypothetical protein A1C_00530 1 None None None 157825488 Common - Ubiquinol-cytochrome c reductase, iron-sulfur subunit A1C_01945 107 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 157826350 Common - hypothetical protein A1C_06695 11 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 157825651 Common - hypothetical protein A1C_02865 8 None None None 157825940 Common - Cell division protein FtsL A1C_04400 1 COG5462 COG5462, Predicted secreted (periplasmic) protein Function unknown 157825384 Pathogen - hypothetical protein A1C_01390 1 None None None 157825835 Common - hypothetical protein A1C_03870 1 None None None 157825473 Common - ribosomal large subunit pseudouridine synthase C A1C_01870 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 157826202 Pathogen - hypothetical protein A1C_05895 1 None None None 157825844 Common - Aminopeptidase P A1C_03915 220 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 157825697 Common - hypothetical protein A1C_03115 64 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 157825920 Pathogen - hypothetical protein A1C_04300 1 None None None 157825812 Common - hypothetical protein A1C_03735 5 COG5449 COG5449, Uncharacterized conserved protein Function unknown 157825284 Common - Acetate kinase A1C_00830 162 COG0282 ackA, Acetate kinase Energy production and conversion 157825949 Pathogen - hypothetical protein A1C_04455 1 None None None 157825198 Common - hypothetical protein A1C_00385 1 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 157826033 Common - GrpE protein A1C_04955 229 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 157826010 Common - Nitrogen regulation protein NtrY A1C_04820 221 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 157825412 Common fmt methionyl-tRNA formyltransferase A1C_01565 218 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 157825292 Common rnc ribonuclease III A1C_00870 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 157825859 Common - hypothetical protein A1C_03990 1 None None None 157826292 Common - methionine aminopeptidase A1C_06395 246 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 157825385 Common - hypothetical protein A1C_01395 1 None None None 157826319 Common gltA type II citrate synthase A1C_06540 193 COG0372 GltA, Citrate synthase Energy production and conversion 157825745 Common - hypothetical protein A1C_03355 1 None None None 157825433 Common - Type I secretion outer membrane protein, TolC family A1C_01670 120 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 157825143 Common - hypothetical protein A1C_00100 1 None None None 157825630 Common - ABC transporter permease protein A1C_02735 46 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 157825637 Common - hypothetical protein A1C_02770 2 COG5307 COG5307, SEC7 domain proteins General function prediction only 157825951 Common - hypothetical protein A1C_04465 2 None None None 157826023 Common - Zinc/manganese ABC transporter permease protein A1C_04885 142 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 157825774 Pathogen - hypothetical protein A1C_03525 1 None None None 157825952 Common - hypothetical protein A1C_04470 2 None None None 157825341 Common - transposase IS200-family protein A1C_01115 10 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826268 Common - hypothetical protein A1C_06255 1 None None None 157825871 Common recO DNA repair protein RecO A1C_04050 36 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 157825625 Common - hypothetical protein A1C_02710 1 None None None 157825524 Pathogen - Cell surface antigen-like protein Sca7 A1C_02145 1 None None None 157825174 Common - F0F1 ATP synthase subunit B A1C_00265 19 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 157825604 Pathogen - hypothetical protein A1C_02595 1 None None None 157825560 Common - Protein kinase C inhibitor 1 A1C_02355 185 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 157825230 Common - preprotein translocase subunit SecB A1C_00545 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 157825374 Common - Ankyrin repeat A1C_01340 1 None None None 157826246 Pathogen - hypothetical protein A1C_06125 1 None None None 157825711 Common - Osmolarity sensor protein EnvZ A1C_03185 188 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 157825132 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase A1C_00035 1 COG1043 LpxA, Acyl- acyl carrier protein 157825764 Common - NADH dehydrogenase subunit N A1C_03460 1 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 157825616 Common - NADH dehydrogenase subunit C A1C_02665 173 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 157825179 Common - ComEC/Rec2-related protein A1C_00290 1 None None None 157825594 Pathogen - hypothetical protein A1C_02545 1 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 157826348 Common - NAD(P) transhydrogenase subunit alpha A1C_06685 117 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 157825613 Common - NADH dehydrogenase subunit D A1C_02650 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 157826357 Common - hypothetical protein A1C_06730 5 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 157825399 Common - hypothetical protein A1C_01465 2 None None None 157826083 Pathogen - hypothetical protein A1C_05215 1 None None None 157826104 Common - proline/betaine transporter A1C_05340 112 None None None 157826015 Pathogen - hypothetical protein A1C_04845 1 None None None 157825905 Common - Acetyltransferase A1C_04225 1 None None None 157825647 Pathogen - CTP synthetase A1C_02835 1 None None None 157825311 Common rpsL 30S ribosomal protein S12 A1C_00965 244 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 157825640 Common - hypothetical protein A1C_02785 1 COG4374 COG4374, Uncharacterized protein conserved in bacteria Function unknown 157825390 Pathogen - hypothetical protein A1C_01420 1 None None None 157826061 Common rplW 50S ribosomal protein L23 A1C_05095 3 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 157825468 Common - hypothetical protein A1C_01845 1 None None None 157825658 Pathogen - hypothetical protein A1C_02900 1 None None None 157825301 Common - Membrane protease subunits A1C_00915 213 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 157825509 Common - hypothetical protein A1C_02050 1 None None None 157825999 Common - Organic radical activating enzyme A1C_04755 172 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 157825685 Common - hypothetical protein A1C_03035 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 157825852 Common - scaffold protein A1C_03955 144 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 157825923 Common - transposase IS200-family protein A1C_04315 11 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826110 Pathogen - hypothetical protein A1C_05415 1 None None None 157825960 Common gyrB DNA gyrase subunit B A1C_04510 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 157826228 Common - DNA polymerase I A1C_06035 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 157825517 Pathogen - Cell surface antigen-like protein Sca7 A1C_02110 1 None None None 157825756 Common - threonine dehydratase A1C_03410 214 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 157826095 Pathogen - hypothetical protein A1C_05275 1 None None None 157826288 Common - Outer memberane protein rOmpA A1C_06375 1 None None None 157826360 Pathogen - succinyl-diaminopimelate desuccinylase A1C_06745 1 None None None 157825877 Common - Fic A1C_04080 3 None None None 157825917 Pathogen - hypothetical protein A1C_04285 1 None None None 157825628 Common lnt apolipoprotein N-acyltransferase A1C_02725 161 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 157826224 Common - 3-oxoacyl-(acyl carrier protein) synthase III A1C_06015 216 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 157825937 Common - Penicillin-binding protein A1C_04385 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 157825969 Common - cytochrome c-type biogenesis protein CcmE/CycJ A1C_04575 92 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 157825883 Common - hypothetical protein A1C_04110 1 None None None 157825287 Common rplS 50S ribosomal protein L19 A1C_00845 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 157826234 Common - ampG protein A1C_06065 109 None None None 157825684 Common - Cytochrome c oxidase polypeptide II A1C_03030 155 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 157826123 Common - Lipoprotein releasing system, transmembrane protein A1C_05490 180 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 157825865 Common - Putative to amino acid permeases A1C_04020 1 None None None 157826161 Common rpmA 50S ribosomal protein L27 A1C_05690 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 157826334 Common - hypothetical protein A1C_06615 1 None None None 157825207 Pathogen - hypothetical protein A1C_00430 1 None None None 157826186 Common - Poly-beta-hydroxybutyrate polymerase A1C_05815 22 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 157825293 Common era GTP-binding protein Era A1C_00875 232 COG1159 Era, GTPase General function prediction only 157825621 Common - hypothetical protein A1C_02690 10 COG5410 COG5410, Uncharacterized protein conserved in bacteria Function unknown 157826192 Common - acyl-carrier-protein S-malonyltransferase A1C_05845 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 157825185 Common - Putative TIM-barrel protein, nifR3 family A1C_00320 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 157825702 Common pheS phenylalanyl-tRNA synthetase subunit alpha A1C_03140 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 157825787 Common - transposase IS200-family protein A1C_03590 15 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157825738 Common - hypothetical protein A1C_03320 1 None None None 157825164 Common - dihydrofolate reductase A1C_00205 3 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 157826206 Pathogen - hypothetical protein A1C_05915 1 None None None 157826046 Common rpsE 30S ribosomal protein S5 A1C_05020 244 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 157825214 Common - soj protein A1C_00465 222 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 157826155 Common - Transcriptional regulator A1C_05660 1 None None None 157826006 Common - hypothetical protein A1C_04790 1 None None None 157825958 Common rpoZ DNA-directed RNA polymerase subunit omega A1C_04500 72 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 157826017 Common - propionyl-CoA carboxylase alpha chain precursor A1C_04855 240 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 157826139 Common - Periplasmic protein A1C_05580 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 157825550 Common - ABC transporter ATP-binding protein A1C_02305 72 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 157825690 Common murG N-acetylglucosaminyl transferase A1C_03060 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 157826107 Common - hypothetical protein A1C_05400 94 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 157825272 Common - 50S ribosomal protein L31 A1C_00755 2 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 157825491 Common - hypothetical protein A1C_01960 2 None None None 157826300 Common - Cation diffusion facilitator family transporter A1C_06445 189 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 157825354 Pathogen - hypothetical protein A1C_01205 1 None None None 157825535 Common - DNA mismatch repair protein A1C_02210 201 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 157825367 Common - thermostable carboxypeptidase A1C_01305 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 157825277 Common - TrbL/VirB6 plasmid Conjugative transfer protein A1C_00795 6 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 157825223 Common - hypothetical protein A1C_00510 2 None None None 157825884 Common - hypothetical protein A1C_04115 87 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 157825244 Common cysS cysteinyl-tRNA synthetase A1C_00615 243 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825527 Common - Transposase and inactivated derivative A1C_02160 1 None None None 157826167 Pathogen - hypothetical protein A1C_05720 1 None None None 157825908 Common rpsA 30S ribosomal protein S1 A1C_04240 216 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 157825348 Pathogen - hypothetical protein A1C_01150 1 None None None 157825580 Common - hypothetical protein A1C_02465 71 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 157826184 Common - transposase IS200-family protein A1C_05805 11 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826179 Common - hypothetical protein A1C_05780 2 None None None 157825770 Common - hypothetical protein A1C_03490 5 None None None 157825869 Common - predicted repair protein A1C_04040 201 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 157825400 Common - Ferredoxin A1C_01470 100 COG0633 Fdx, Ferredoxin Energy production and conversion 157825457 Common - hypothetical protein A1C_01790 48 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 157826255 Common - aconitate hydratase A1C_06180 222 COG1048 AcnA, Aconitase A Energy production and conversion 157825156 Common - hypothetical protein A1C_00165 124 COG1678 COG1678, Putative transcriptional regulator Transcription 157826057 Common rpsC 30S ribosomal protein S3 A1C_05075 242 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 157825140 Pathogen - hypothetical protein A1C_00085 1 None None None 157825829 Common - octaprenyl-diphosphate synthase A1C_03830 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 157825895 Common - hypothetical protein A1C_04170 12 None None None 157826141 Pathogen ligA NAD-dependent DNA ligase LigA A1C_05590 1 None None None 157825605 Common - outer membrane assembly protein A1C_02600 58 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 157825413 Pathogen - hypothetical protein A1C_01570 1 None None None 157825846 Pathogen - hypothetical protein A1C_03925 1 None None None 157825934 Common - hypothetical protein A1C_04370 1 None None None 157825568 Common cyaY frataxin-like protein A1C_02395 8 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 157825307 Common - hypothetical protein A1C_00945 1 None None None 157825947 Common - hypothetical protein A1C_04435 45 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 157825286 Common - tRNA (guanine-N(1)-)-methyltransferase A1C_00840 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 157826291 Common - Cell division protein FtsK-like protein A1C_06390 198 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 157825791 Common - hypothetical protein A1C_03610 180 COG1496 COG1496, Uncharacterized conserved protein Function unknown 157825803 Common - Superoxide dismutase A1C_03670 207 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 157826208 Pathogen - hypothetical protein A1C_05925 1 None None None 157825850 Pathogen - hypothetical protein A1C_03945 1 None None None 157825656 Common - hypothetical protein A1C_02890 1 None None None 157826182 Common - Hemolysin C A1C_05795 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 157825155 Common - hypothetical protein A1C_00160 7 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 157825973 Common - hypothetical protein A1C_04595 4 None None None 157825481 Pathogen - hypothetical protein A1C_01910 1 None None None 157825196 Common - hypothetical protein A1C_00375 1 None None None 157825435 Common - Ankyrin repeat A1C_01680 2 None None None 157826035 Common - hypothetical protein A1C_04965 72 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 157825914 Pathogen - hypothetical protein A1C_04270 1 None None None 157826328 Common glyQ glycyl-tRNA synthetase subunit alpha A1C_06585 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 157826266 Common - hypothetical protein A1C_06245 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 157825747 Common - transposase IS200-family protein A1C_03365 15 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826198 Common - hypothetical protein A1C_05875 40 COG3814 COG3814, Uncharacterized protein conserved in bacteria Function unknown 157825300 Pathogen - hypothetical protein A1C_00910 1 None None None 157826063 Common rplC 50S ribosomal protein L3 A1C_05105 221 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 157825713 Common - branched-chain amino acid aminotransferase A1C_03195 212 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 157825691 Common - hypothetical protein A1C_03065 1 None None None 157825251 Common - aspartate aminotransferase A1C_00650 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 157825405 Common - glutaredoxin 3 A1C_01495 126 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 157826370 Common rpsP 30S ribosomal protein S16 A1C_06795 209 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 157825768 Common - ribonucleotide-diphosphate reductase alpha subunit A1C_03480 220 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 157825194 Common - Site-specific DNA methylase A1C_00365 40 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 157825475 Common - exodeoxyribonuclease III A1C_01880 195 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 157826012 Common - hypothetical protein A1C_04830 25 COG5590 COG5590, Uncharacterized conserved protein Function unknown 157826313 Common - hypothetical protein A1C_06510 16 COG1872 COG1872, Uncharacterized conserved protein Function unknown 157826368 Common lipB lipoyltransferase A1C_06785 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 157825423 Common - beta 1,4 glucosyltransferase A1C_01620 114 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 157826351 Common - DNA polymerase III subunits gamma and tau A1C_06700 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 157825552 Common - TolR protein A1C_02315 141 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 157825990 Common - hypothetical protein A1C_04700 1 None None None 157825793 Pathogen - hypothetical protein A1C_03620 1 None None None 157826321 Common - N-terminus of bacteriophage-type DNA polymerase A1C_06550 153 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 157825618 Common - NADH dehydrogenase subunit A A1C_02675 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 157826248 Common - NADH dehydrogenase subunit I A1C_06135 193 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 157826362 Common - Type I restriction-modification system methyltransferase subunit A1C_06755 60 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 157825507 Common - VirB9 protein A1C_02040 56 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 157826081 Common - hypothetical protein A1C_05205 15 None None None 157825241 Common - hypothetical protein A1C_00600 56 COG1738 COG1738, Uncharacterized conserved protein Function unknown 157825397 Common - Universal stress protein UspA A1C_01455 37 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 157825872 Common - Putative glycoprotein endopeptidase A1C_04055 152 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 157825649 Common - 3-deoxy-manno-octulosonate cytidylyltransferase A1C_02855 137 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 157825549 Common - ABC transporter ATP-binding protein A1C_02300 202 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 157825428 Common - ABC-type multidrug transport system, ATPase and permease components A1C_01645 1 None None None 157825325 Pathogen - hypothetical protein A1C_01035 1 None None None 157825382 Common - hypothetical protein A1C_01380 10 None None None 157826277 Common - DnaK suppressor protein A1C_06310 156 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 157825145 Pathogen - hypothetical protein A1C_00110 1 None None None 157825596 Pathogen - ABC transporter, ATP-binding protein A1C_02555 1 None None None 157825233 Common - hypothetical protein A1C_00560 41 COG3820 COG3820, Uncharacterized protein conserved in bacteria Function unknown 157826132 Common - Beta-glucosidase A1C_05545 170 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 157825735 Pathogen gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase A1C_03305 1 None None None 157825751 Common - DNA helicase II A1C_03385 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 157826215 Common - Predicted ATPase A1C_05970 18 COG1373 COG1373, Predicted ATPase (AAA+ superfamily) General function prediction only 157826025 Common gltX glutamyl-tRNA synthetase A1C_04895 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 157825217 Common - hypothetical protein A1C_00480 1 None None None 157826251 Common - NADH dehydrogenase subunit G A1C_06150 189 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 157825314 Common secE preprotein translocase subunit SecE A1C_00980 2 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 157825225 Common - DNA topoisomerase IV subunit A A1C_00520 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 157826281 Common - Poly(3-hydroxyalkanoate) synthetase A1C_06330 73 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 157825331 Common - Amino acid ABC transporter substrate binding protein A1C_01065 145 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 157825177 Common - cell surface antigen A1C_00280 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 157826241 Common - hypothetical protein A1C_06100 41 COG4797 COG4797, Predicted regulatory domain of a methyltransferase General function prediction only 157825623 Common - hypothetical protein A1C_02700 2 COG5362 COG5362, Phage-related terminase General function prediction only 157825172 Common - F0F1 ATP synthase subunit C A1C_00255 69 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 157825833 Common - AmpG-related permease A1C_03850 100 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 157825273 Common - GTPase EngB A1C_00760 187 COG0218 COG0218, Predicted GTPase General function prediction only 157825246 Common tsf elongation factor Ts A1C_00625 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 157826216 Common - hypothetical protein A1C_05975 11 COG1373 COG1373, Predicted ATPase (AAA+ superfamily) General function prediction only 157826252 Common - hypothetical protein A1C_06155 21 COG3671 COG3671, Predicted membrane protein Function unknown 157825619 Common - hypothetical protein A1C_02680 3 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 157826152 Common - hypothetical protein A1C_05645 2 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 157825823 Common - hypothetical protein A1C_03800 1 None None None 157825955 Common - translocase A1C_04485 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 157826364 Common - Type I restriction-modification system methyltransferase subunit A1C_06765 1 COG4096 HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 157825963 Pathogen - hypothetical protein A1C_04525 1 None None None 157826244 Common - NADH dehydrogenase subunit L A1C_06115 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 157826344 Common - RNA polymerase sigma factor RpoD A1C_06665 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 157825674 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase A1C_02980 182 COG0756 Dut, dUTPase Nucleotide transport and metabolism 157825334 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C A1C_01080 90 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 157826303 Common - Zinc ABC transporter ATP-binding protein A1C_06460 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 157825733 Common ppnK inorganic polyphosphate/ATP-NAD kinase A1C_03295 214 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 157825893 Pathogen - hypothetical protein A1C_04160 1 None None None 157825505 Pathogen - putative monovalent cation/H+ antiporter subunit C A1C_02030 1 None None None 157826177 Common glyA serine hydroxymethyltransferase A1C_05770 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 157826076 Common - hypothetical protein A1C_05180 1 None None None 157826014 Common ileS isoleucyl-tRNA synthetase A1C_04840 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157826074 Common - hypothetical protein A1C_05170 84 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 157825977 Common - Succinyl-CoA:3-ketoacid-coenzyme A transferase A1C_04615 88 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 157825238 Pathogen secG preprotein translocase subunit SecG A1C_00585 1 None None None 157826028 Common - hypothetical protein A1C_04920 203 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 157825815 Common infC translation initiation factor IF-3 A1C_03750 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 157825395 Common - Cell surface antigen-like protein Sca8 A1C_01445 1 None None None 157825171 Common - F0F1 ATP synthase subunit A A1C_00250 198 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 157825956 Common - protein export protein prsA precursor A1C_04490 160 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 157825267 Common - alanine racemase A1C_00730 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 157825777 Common - ABC transporter ATP-binding protein A1C_03540 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 157825663 Common - penicillin-binding protein dacF precursor A1C_02925 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 157825657 Common ruvA Holliday junction DNA helicase motor protein A1C_02895 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 157826100 Common - hypothetical protein A1C_05320 1 None None None 157825368 Common - DNA repair protein RecN A1C_01310 201 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 157825483 Common - isocitrate dehydrogenase A1C_01920 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 157825562 Common - ATP-dependent protease peptidase subunit A1C_02365 153 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 157826236 Common - seryl-tRNA synthetase A1C_06075 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825724 Common - hypothetical protein A1C_03250 22 COG1714 COG1714, Predicted membrane protein/domain Function unknown 157825909 Common cmk cytidylate kinase A1C_04245 205 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 157826089 Common - Predicted ATPase A1C_05245 1 None None None 157826352 Common - hypothetical protein A1C_06705 67 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 157825320 Common rpoB DNA-directed RNA polymerase subunit beta A1C_01010 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 157826080 Common - dimethyladenosine transferase A1C_05200 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 157825598 Common - 30S ribosomal protein S4 A1C_02565 224 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 157825612 Common - NADH dehydrogenase subunit E A1C_02645 154 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 157825571 Pathogen - hypothetical protein A1C_02420 1 None None None 157825346 Common - Ribosomal RNA large subunit methyltransferase J A1C_01140 139 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 157826279 Common - Phasin family protein A1C_06320 3 None None None 157825134 Common - (3R)-hydroxymyristoyl ACP dehydratase A1C_00045 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 157825327 Common - hypothetical protein A1C_01045 2 None None None 157825308 Common - Toxin of toxin-antitoxin (TA) system ParE A1C_00950 1 COG3668 ParE, Plasmid stabilization system protein General function prediction only 157826359 Common - DNA polymerase III subunit chi A1C_06740 19 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 157826087 Common - hypothetical protein A1C_05235 3 COG4095 COG4095, Uncharacterized conserved protein Function unknown 157826109 Common - hypothetical protein A1C_05410 3 None None None 157825841 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase A1C_03900 160 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 157825796 Pathogen - pyruvate phosphate dikinase A1C_03635 1 None None None 157825554 Common - hypothetical protein A1C_02325 1 None None None 157826181 Common - hypothetical protein A1C_05790 110 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 157826036 Common - MFS type sugar transporter A1C_04970 1 None None None 157826221 Common - Rod shape-determining protein MreB A1C_06000 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 157825761 Common - probable sigma(54) modulation protein A1C_03445 95 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 157825449 Common - elongation factor P A1C_01750 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 157825193 Common - cell division protein ftsH A1C_00360 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 157825463 Common - Cell division protein FtsA A1C_01820 176 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 157825252 Common - hypothetical protein A1C_00655 8 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 157825176 Common - Tetratricopeptide repeat-containing protein A1C_00275 1 None None None 157825839 Common - hypothetical protein A1C_03890 5 COG3041 COG3041, Uncharacterized protein conserved in bacteria Function unknown 157825144 Common - hypothetical protein A1C_00105 2 None None None 157825701 Common - MiaB-like tRNA modifying enzyme A1C_03135 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 157826262 Common - Strees induced DNA-binding protein A1C_06215 107 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 157825925 Common - 3-hydroxyacyl-CoA dehydrogenase FadB A1C_04325 154 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 157826280 Common - Phospholipase D (PLD) superfamily protein A1C_06325 51 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 157825220 Common - Iron-sulfur cluster assembly accessory protein A1C_00495 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 157826048 Common rplF 50S ribosomal protein L6 A1C_05030 243 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 157825717 Common - succinyl-CoA synthetase subunit alpha A1C_03215 212 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 157825938 Common - hypothetical protein A1C_04390 2 None None None 157826298 Common - Heme exporter protein C A1C_06435 114 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 157826310 Common - hypothetical protein A1C_06495 1 None None None 157825479 Pathogen - hypothetical protein A1C_01900 1 None None None 157826004 Common - ribonuclease P A1C_04780 5 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 157825295 Common - tRNA/rRNA methyltransferase A1C_00885 154 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 157826315 Common - 5-aminolevulinate synthase A1C_06520 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 157825879 Common - Hemolysin A A1C_04090 131 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 157825631 Common - putative ABC transporter ATP-binding protein A1C_02740 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 157825800 Pathogen - hypothetical protein A1C_03655 1 None None None 157825358 Common - Signal recognition particle protein A1C_01230 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 157825477 Common - pyruvate dehydrogenase subunit beta A1C_01890 216 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 157825854 Common - hypothetical protein A1C_03965 225 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 157825470 Common - hypothetical protein A1C_01855 1 None None None 157825994 Common - translation-associated GTPase A1C_04730 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 157825608 Common - exodeoxyribonuclease VII small subunit A1C_02625 97 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 157825741 Common - Thioredoxin reductase A1C_03335 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 157825216 Common - putative ABC transporter ATP-binding component A1C_00475 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 157825715 Common smpB SsrA-binding protein A1C_03205 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 157825890 Pathogen - hypothetical protein A1C_04145 1 None None None 157826264 Pathogen - hypothetical protein A1C_06225 1 None None None 157825629 Common - hypothetical protein A1C_02730 47 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 157826103 Common tdk thymidylate kinase A1C_05335 227 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 157825402 Common hscB co-chaperone HscB A1C_01480 51 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 157826054 Common rpsQ 30S ribosomal protein S17 A1C_05060 231 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 157825350 Common - hypothetical protein A1C_01160 101 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 157826196 Common coaE dephospho-CoA kinase A1C_05865 129 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 157825677 Common - Microcin C7 self-immunity protein A1C_02995 79 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 157825693 Common - RND family efflux transporter A1C_03095 112 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 157825667 Common - FTR1 family protein A1C_02945 25 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 157825557 Common - Alkaline protease secretion protein AprE A1C_02340 131 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 157825515 Common - Guanosine pentaphosphate phosphohydrolase A1C_02080 98 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 157825528 Common - Transposase and inactivated derivative A1C_02165 1 None None None 157825409 Common - hypothetical protein A1C_01550 1 None None None 157825899 Common - isopentenyl pyrophosphate isomerase A1C_04195 80 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 157826140 Common - hypothetical protein A1C_05585 84 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 157825275 Common - Type IV secretion/conjugal transfer ATPase, VirB4 family protein A1C_00785 68 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 157825126 Common - hypothetical protein A1C_00005 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 157825453 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase A1C_01770 153 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 157826193 Common - ATP-dependent helicase A1C_05850 229 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 157825997 Common - peptidyl-tRNA hydrolase A1C_04745 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 157825264 Common - Ribose-phosphate pyrophosphokinase A1C_00715 45 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 157825492 Common - heat shock protein A1C_01965 59 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 157826019 Pathogen - acylglycerophosphoethanolamine acyltransferase A1C_04865 1 None None None 157825821 Common - Integration host factor beta-subunit A1C_03790 6 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 157825882 Common - hypothetical protein A1C_04105 1 None None None 157825243 Common - 190 kD antigen precursor A1C_00610 3 COG5222 COG5222, Uncharacterized conserved protein, contains RING Zn-finger General function prediction only 157825943 Common - Sodium/pantothenate symporter A1C_04415 140 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 157826097 Common - Mannose-1-phosphate guanylyltransferase A1C_05295 2 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 157825362 Common - proton/sodium-glutamate symport protein A1C_01280 160 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 157826158 Common - hypothetical protein A1C_05675 71 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 157825729 Pathogen - hypothetical protein A1C_03275 1 None None None 157825208 Common - Polypeptide deformylase A1C_00435 164 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 157825779 Common - hypothetical protein A1C_03550 3 COG5375 COG5375, Uncharacterized protein conserved in bacteria Function unknown 157826284 Pathogen - hypothetical protein A1C_06355 1 None None None 157825389 Pathogen - Cell surface antigen-like protein Sca8 A1C_01415 1 None None None 157825250 Common - hypothetical protein A1C_00645 40 COG2121 COG2121, Uncharacterized protein conserved in bacteria Function unknown 157825780 Common - KpsF protein A1C_03555 164 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 157826354 Pathogen - Beta-lactamase AmpC (Class C) A1C_06715 1 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 157825722 Common rbfA ribosome-binding factor A A1C_03240 61 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 157825485 Common - putative monovalent cation/H+ antiporter subunit B A1C_01930 75 COG1563 COG1563, Predicted subunit of the Multisubunit Na+/H+ antiporter Inorganic ion transport and metabolism 157825281 Pathogen - Antitoxin of toxin-antitoxin system VapB A1C_00815 1 None None None 157825782 Common rpsO 30S ribosomal protein S15 A1C_03565 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 157825578 Common - Thioredoxin peroxidase 1 A1C_02455 224 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 157825828 Common hemC porphobilinogen deaminase A1C_03825 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 157826130 Common - Outer membrane protein B A1C_05535 118 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 157825371 Common - DnaJ protein A1C_01325 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 157825425 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase A1C_01630 143 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 157825655 Common - hypothetical protein A1C_02885 1 None None None 157826270 Common - glutathione-regulated potassium-efflux system protein kefB A1C_06275 181 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 157826273 Pathogen - hypothetical protein A1C_06290 1 None None None 157825160 Common - hypothetical protein A1C_00185 1 None None None 157826336 Common alaS alanyl-tRNA synthetase A1C_06625 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825278 Common - hypothetical protein A1C_00800 11 COG3704 VirB6, Type IV secretory pathway, VirB6 components Intracellular trafficking and secretion 157825801 Common - BioY family protein A1C_03660 98 COG1268 BioY, Uncharacterized conserved protein General function prediction only 157825162 Common - hypothetical protein A1C_00195 2 None None None 157826137 Common - lipid A biosynthesis lauroyl acyltransferase A1C_05570 119 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 157825544 Common - cytochrome C oxidase assembly protein A1C_02275 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 157825912 Common - hypothetical protein A1C_04260 4 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 157825169 Common - Protein-disulfide isomerase A1C_00240 67 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 157825987 Common - hypothetical protein A1C_04685 40 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 157825415 Common - putative ATPase n2B A1C_01580 98 COG1485 COG1485, Predicted ATPase General function prediction only 157825861 Common - primosome assembly protein PriA A1C_04000 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 157826254 Common - hypothetical protein A1C_06165 1 None None None 157826201 Common - ABC transporter substrate binding protein A1C_05890 72 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 157825874 Common infB translation initiation factor IF-2 A1C_04065 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 157825503 Pathogen - putative monovalent cation/H+ antiporter subunit D A1C_02020 1 None None None 157825494 Common - GTP-binding protein LepA A1C_01975 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 157825926 Common - hypothetical protein A1C_04330 1 None None None 157825298 Common - Mrp protein A1C_00900 235 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 157825329 Common - dihydrodipicolinate reductase A1C_01055 216 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 157825689 Common - Cell division protein FtsW A1C_03055 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 157825322 Common - hypothetical protein A1C_01020 1 None None None 157825521 Pathogen - protein transport protein sec7 (sec7) A1C_02130 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 157826009 Common - Acetyltransferase A1C_04815 18 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 157825201 Common - hypothetical protein A1C_00400 64 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 157826226 Common - hypothetical protein A1C_06025 15 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 157825393 Pathogen - hypothetical protein A1C_01435 1 None None None 157825218 Common - 2-dehydro-3-deoxyphosphooctonate aldolase A1C_00485 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 157826259 Common - F0F1 ATP synthase subunit alpha A1C_06200 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 157825765 Common - Thioredoxin reductase A1C_03465 230 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 157825269 Common - Ribonucleotide ABC transporter ATP-binding protein A1C_00740 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 157825147 Common - Cell surface antigen-like protein Sca10 A1C_00120 1 None None None 157826051 Common rplE 50S ribosomal protein L5 A1C_05045 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 157825229 Common dcd deoxycytidine triphosphate deaminase A1C_00540 149 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 157825467 Common - cytochrome c A1C_01840 57 COG3474 COG3474, Cytochrome c2 Energy production and conversion 157825661 Common - Multidrug resistance protein A1C_02915 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 157826211 Common acpP acyl carrier protein A1C_05940 209 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 157825726 Common - hypothetical protein A1C_03260 4 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 157826126 Pathogen - hypothetical protein A1C_05505 1 None None None 157825131 Common - UDP-N-acetylglucosamine acyltransferase A1C_00030 146 COG1043 LpxA, Acyl- acyl carrier protein 157825614 Common - Endo/excinuclease amino terminal domain protein A1C_02655 20 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 157826060 Common rplB 50S ribosomal protein L2 A1C_05090 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 157825404 Common - excinuclease ABC subunit B A1C_01490 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 157826085 Common - Predicted membrane protein A1C_05225 12 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 157825316 Common rplK 50S ribosomal protein L11 A1C_00990 242 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 157825386 Pathogen - hypothetical protein A1C_01400 1 None None None 157825591 Common - hypothetical protein A1C_02530 90 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 157826078 Common - cold shock-like protein A1C_05190 175 COG1278 CspC, Cold shock proteins Transcription 157826041 Common rpsM 30S ribosomal protein S13 A1C_04995 223 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 157825447 Common - dinucleoside polyphosphate hydrolase A1C_01740 112 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 157825746 Pathogen - hypothetical protein A1C_03360 1 None None None 157826366 Common - Na+/H+ antiporter NhaA A1C_06775 56 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 157825825 Common - Na+/proline symporter and signal transduction histidine kinase A1C_03810 1 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 157825970 Common - inorganic pyrophosphatase A1C_04580 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 157825336 Common - ribosome releasing factor A1C_01090 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 157826223 Common - Peptidoglycan-associated lipoprotein precursor A1C_06010 149 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 157826378 Pathogen - hypothetical protein A1C_06850 1 None None None 157826309 Pathogen - hypothetical protein A1C_06490 1 None None None 157826175 Common - DNA modification methylase-like protein A1C_05760 4 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 157825236 Common - S-adenosylmethionine transporter A1C_00575 67 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 157825979 Common - hypothetical protein A1C_04625 90 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 157825953 Common - Ankyrin repeat A1C_04475 2 None None None 157826218 Common gmk guanylate kinase A1C_05985 213 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 157826282 Common - UbiD family decarboxylase A1C_06335 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 157825317 Common rplA 50S ribosomal protein L1 A1C_00995 243 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 157825911 Pathogen - transposase Tn5 A1C_04255 2 None None None 157825703 Common pheT phenylalanyl-tRNA synthetase subunit beta A1C_03145 240 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 157825564 Pathogen lpxB lipid-A-disaccharide synthase A1C_02375 1 None None None 157826016 Pathogen - hypothetical protein A1C_04850 1 None None None 157825231 Common - Transcriptional activator protein CzcR A1C_00550 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 157825719 Common - hypothetical protein A1C_03225 1 COG3038 CybB, Cytochrome B561 Energy production and conversion 157825672 Common - thiol:disulfide interchange protein tlpA A1C_02970 121 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 157825432 Common - hypothetical protein A1C_01665 1 None None None 157826065 Common - elongation factor Tu A1C_05115 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 157826324 Common - Growth inhibitor A1C_06565 3 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 157826296 Common - Putative outer surface protein A1C_06425 7 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 157825472 Common - Cytochrome c oxidase assembly protein A1C_01865 45 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 157825743 Pathogen - hypothetical protein A1C_03345 1 None None None 157825378 Common - Ubiquinone biosynthesis protein Coq7 A1C_01360 43 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 157825807 Pathogen - hypothetical protein A1C_03710 1 None None None 157825306 Common - Succinate dehydrogenase hydrophobic membrane anchor protein A1C_00940 15 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 157825843 Pathogen - Predicted hydrolase or acyltransferase A1C_03910 3 None None None 157825561 Common - hypothetical protein A1C_02360 1 None None None 157826038 Common rplQ 50S ribosomal protein L17 A1C_04980 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 157825511 Common - VirB9 protein precursor A1C_02060 37 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 157826260 Common - F0F1 ATP synthase subunit delta A1C_06205 158 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 157825712 Common - PetR protein A1C_03190 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 157825763 Common - Methylenetetrahydrofolate dehydrogenase A1C_03455 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 157825420 Common - hypothetical protein A1C_01605 1 None None None 157825211 Common ndk nucleoside diphosphate kinase A1C_00450 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 157826373 Common - hypothetical protein A1C_06810 2 COG4391 COG4391, Uncharacterized protein conserved in bacteria Function unknown 157826347 Common greA transcription elongation factor GreA A1C_06680 204 COG0782 GreA, Transcription elongation factor Transcription 157825136 Common - Predicted esterase of the alpha-beta hydrolase superfamily protein A1C_00055 3 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 157825931 Common - putative monovalent cation/H+ antiporter subunit F A1C_04355 1 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 157825254 Common - hypothetical protein A1C_00665 50 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 157825798 Common - Glutathione S-transferase A1C_03645 53 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 157825465 Pathogen - hypothetical protein A1C_01830 1 None None None 157826269 Common - hypothetical protein A1C_06270 42 COG3807 COG3807, Uncharacterized protein conserved in bacteria Function unknown 157826381 Pathogen - hypothetical protein A1C_06865 1 None None None 157825583 Common - dTDP-4-dehydrorhamnose reductase A1C_02480 124 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 157825710 Common - Undecaprenyl pyrophosphate synthetase A1C_03180 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 157825451 Common - hypothetical protein A1C_01760 6 None None None 157826147 Common - hypothetical protein A1C_05620 1 None None None 157825266 Pathogen - hypothetical protein A1C_00725 1 None None None 157826317 Common tig trigger factor A1C_06530 215 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 157826171 Common - Glutaredoxin-like protein grla A1C_05740 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 157825814 Common - hypothetical protein A1C_03745 1 COG5346 COG5346, Predicted membrane protein Function unknown 157825880 Common - tyrosyl-tRNA synthetase A1C_04095 217 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157826163 Common - Phosphatidylglycerophosphatase A A1C_05700 58 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 157825430 Common - hypothetical protein A1C_01655 2 None None None 157825536 Pathogen - hypothetical protein A1C_02215 1 None None None 157825903 Pathogen - hypothetical protein A1C_04215 1 None None None 157825167 Pathogen - hypothetical protein A1C_00230 1 None None None 157826112 Common - hypothetical protein A1C_05435 3 COG5528 COG5528, Predicted integral membrane protein Function unknown 157825324 Common - Chromosome partitioning protein A1C_01030 66 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 157825585 Common - UDP-N-acetylglucosamine 2-epimerase A1C_02490 154 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 157825889 Common - biotin synthesis protein BioC A1C_04140 75 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 157826052 Common rplX 50S ribosomal protein L24 A1C_05050 198 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 157825352 Common - hypothetical protein A1C_01170 203 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 157826205 Common - hypothetical protein A1C_05910 1 None None None 157825732 Pathogen - hypothetical protein A1C_03290 1 None None None 157825455 Pathogen - hypothetical protein A1C_01780 1 None None None 157825739 Common - Predicted permease A1C_03325 16 COG0679 COG0679, Predicted permeases General function prediction only 157825837 Common - hypothetical protein A1C_03880 88 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 157825665 Common - hypothetical protein A1C_02935 58 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 157825338 Common - putative monovalent cation/H+ antiporter subunit E A1C_01100 25 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 157825344 Common - Membrane-associated zinc metalloprotease A1C_01130 209 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 157825775 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase A1C_03530 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 157825897 Common - UDP-N-acetylglucosamine pyrophosphorylase A1C_04180 215 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 157825407 Pathogen - hypothetical protein A1C_01530 1 None None None 157825627 Common - enoyl-(acyl carrier protein) reductase A1C_02720 217 COG0623 FabI, Enoyl- acyl-carrier-protein 157826124 Common - Lipoprotein releasing system ATP-binding protein LolD A1C_05495 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 157826151 Common - hypothetical protein A1C_05640 1 None None None 157825559 Common - aspartate-semialdehyde dehydrogenase A1C_02350 218 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 157825388 Common - bifunctional penicillin-binding protein 1C A1C_01410 199 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 157826071 Common - cell division protein FtsZ A1C_05145 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 157825291 Common - Signal peptidase I A1C_00865 199 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 157826295 Common - hypothetical protein A1C_06420 1 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 157825418 Pathogen - hypothetical protein A1C_01595 1 None None None 157825966 Common - preprotein translocase subunit YajC A1C_04560 174 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 157826355 Common - Glutamine ABC transporter ATP-binding protein A1C_06720 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 157825609 Common - hypothetical protein A1C_02630 1 None None None 157825392 Pathogen - hypothetical protein A1C_01430 1 None None None 157825642 Common - Proline/betaine transporter A1C_02795 114 None None None 157825542 Common tolB translocation protein TolB precursor A1C_02265 151 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 157825928 Common - hypothetical protein A1C_04340 1 None None None 157826173 Common - hypothetical protein A1C_05750 2 None None None 157825203 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase A1C_00410 206 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 157825303 Common - hypothetical protein A1C_00925 108 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 157826156 Common - PIN domain containing protein A1C_05665 1 COG4374 COG4374, Uncharacterized protein conserved in bacteria Function unknown 157825496 Common - hypothetical protein A1C_01985 6 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 157825151 Pathogen - hypothetical protein A1C_00140 1 None None None 157825705 Common - hypothetical protein A1C_03155 19 None None None 157826007 Pathogen - hypothetical protein A1C_04795 1 None None None 157825248 Pathogen - hypothetical protein A1C_00635 1 None None None 157826275 Common infA translation initiation factor IF-1 A1C_06300 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 157825754 Pathogen - hypothetical protein A1C_03400 1 None None None 157825682 Common - hypothetical protein A1C_03020 1 None None None 157825602 Common - hypothetical protein A1C_02585 11 None None None 157826338 Common - hypothetical protein A1C_06635 1 None None None 157825867 Common - Uncharacterized low-complexity protein A1C_04030 71 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 157825364 Common - hypothetical protein A1C_01290 99 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 157825784 Common - ADP,ATP carrier protein A1C_03575 9 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 157825191 Common rplI 50S ribosomal protein L9 A1C_00350 214 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 157825259 Pathogen - Predicted esterase of the alpha-beta hydrolase superfamily protein A1C_00690 1 None None None 157825856 Common - hypothetical protein A1C_03975 2 None None None 157825965 Pathogen yajC preprotein translocase subunit YajC A1C_04555 1 None None None 157826099 Common - Poly-beta-hydroxyalkanoate depolymerase A1C_05305 46 COG4553 DepA, Poly-beta-hydroxyalkanoate depolymerase Lipid metabolism 157825980 Common - Actin polymerization protein RickA A1C_04650 9 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 157825653 Common - prolyl-tRNA synthetase A1C_02875 247 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157826166 Common - hypothetical protein A1C_05715 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 157826135 Common - hypothetical protein A1C_05560 1 None None None 157825187 Common - transposase IS200-family protein A1C_00330 10 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157825513 Common - VirB11 protein A1C_02070 153 COG0630 VirB11, Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis Cell motility and secretion / Intracellular trafficking and secretion 157826238 Common - hypothetical protein A1C_06085 2 None None None 157826002 Common rplT 50S ribosomal protein L20 A1C_04770 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 157825989 Common - hypothetical protein A1C_04695 1 None None None 157826346 Common - Dolichol kinase A1C_06675 13 COG0170 SEC59, Dolichol kinase Lipid metabolism 157826195 Common - DNA polymerase III subunit epsilon A1C_05860 189 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 157825474 Common - Penicillin-binding protein 4* A1C_01875 120 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 157825972 Common - F pilin acetylation protein TraX A1C_04590 3 None None None 157826021 Common - acylglycerophosphoethanolamine acyltransferase A1C_04875 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 157825832 Common - Lipopolysaccharide 1,2-glucosyltransferase RfaJ A1C_03845 33 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 157826032 Common rph ribonuclease PH A1C_04950 184 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 157825213 Common gidB glucose-inhibited division protein B A1C_00460 147 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 157825650 Common - ADP-ribose pyrophosphatase MutT A1C_02860 10 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 157825748 Common - succinate semialdehyde dehydrogenase A1C_03370 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 157826383 Common hemH ferrochelatase A1C_06875 175 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 157826267 Pathogen - hypothetical protein A1C_06250 1 None None None 157825445 Common - Putative pterin-4-alpha-carbinolamine dehydratase (PHS) A1C_01730 1 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 157825138 Common - clpB protein A1C_00065 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 157825567 Common - hypothetical protein A1C_02390 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 157826185 Common - ADP,ATP carrier protein A1C_05810 6 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 157825904 Pathogen - hypothetical protein A1C_04220 1 None None None 157826199 Common rnhA ribonuclease H A1C_05880 175 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 157825398 Common - hypothetical protein A1C_01460 71 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 157825799 Common - hypothetical protein A1C_03650 8 COG4285 COG4285, Uncharacterized conserved protein Function unknown 157826293 Common - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase A1C_06410 175 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 157825851 Common - Iron-sulfur cluster assembly accessory protein A1C_03950 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 157826314 Common - heat shock protein 90 A1C_06515 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 157826349 Common - NAD(P) transhydrogenase subunit alpha A1C_06690 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 157826191 Common - hypothetical protein A1C_05840 1 None None None 157826203 Common - MFS type sugar transporter A1C_05900 1 None None None 157826157 Common - hypothetical protein A1C_05670 50 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 157825434 Common - hypothetical protein A1C_01675 12 COG3827 COG3827, Uncharacterized protein conserved in bacteria Function unknown 157825708 Common - hypothetical protein A1C_03170 24 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 157825587 Pathogen - hypothetical protein A1C_02500 1 None None None 157825698 Common - Glycosyltransferase A1C_03120 222 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 157825998 Common - 50S ribosomal protein L25/general stress protein Ctc A1C_04750 191 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 157825283 Common - phosphate acetyltransferase A1C_00825 124 COG0280 Pta, Phosphotransacetylase Energy production and conversion 157825948 Common - hypothetical protein A1C_04440 18 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 157825790 Common - Glutamine synthetase A1C_03605 217 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 157825811 Common - hypothetical protein A1C_03730 2 None None None 157825870 Common - hypothetical protein A1C_04045 2 None None None 157825234 Common - NAD(p) transhydrogenase subunit beta A1C_00565 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 157825460 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase A1C_01805 202 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 157825406 Common - DNA gyrase subunit A A1C_01525 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 157825615 Common - NADH dehydrogenase subunit C A1C_02660 3 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 157825375 Common - hypothetical protein A1C_01345 1 None None None 157826212 Common - 3-oxoacyl-(acyl carrier protein) synthase II A1C_05945 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 157825319 Common rplL 50S ribosomal protein L7/L12 A1C_01005 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 157825601 Pathogen - Putative lyase A1C_02580 1 None None None 157825845 Common - Putrescine-ornithine antiporter A1C_03920 161 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 157826367 Common - hypothetical protein A1C_06780 9 COG1434 COG1434, Uncharacterized conserved protein Function unknown 157825933 Common - hypothetical protein A1C_04365 91 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 157826240 Common - hypothetical protein A1C_06095 2 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 157826043 Common secY preprotein translocase subunit SecY A1C_05005 243 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 157825593 Pathogen - ABC transporter, ATP-binding protein A1C_02540 1 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 157825714 Common - dihydrodipicolinate synthase A1C_03200 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 157826024 Common - 3-demethylubiquinone-9 3-methyltransferase A1C_04890 151 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 157825773 Common - hypothetical protein A1C_03520 1 None None None 157825543 Common - RNA polymerase factor sigma-32 A1C_02270 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 157825342 Common - hypothetical protein A1C_01120 1 None None None 157825866 Common - Ribosomal large subunit pseudouridine synthase A1C_04025 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 157825660 Common ruvB Holliday junction DNA helicase B A1C_02910 216 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 157825224 Common - hypothetical protein A1C_00515 1 None None None 157825383 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase A1C_01385 143 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 157825175 Pathogen - hypothetical protein A1C_00270 1 None None None 157825349 Pathogen - hypothetical protein A1C_01155 1 None None None 157826247 Common - Heme exporter protein A A1C_06130 204 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 157825950 Pathogen - hypothetical protein A1C_04460 1 None None None 157825767 Pathogen - hypothetical protein A1C_03475 1 None None None 157825670 Common - hypothetical protein A1C_02960 2 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 157825487 Common - hypothetical protein A1C_01940 1 None None None 157826062 Common rplD 50S ribosomal protein L4 A1C_05100 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 157825330 Common - hypothetical protein A1C_01060 129 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 157825133 Pathogen - hypothetical protein A1C_00040 1 None None None 157825469 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase A1C_01850 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 157825638 Common - transposase IS200-family protein A1C_02775 11 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826105 Common ubiA prenyltransferase A1C_05345 161 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 157826067 Common - hypothetical protein A1C_05125 1 None None None 157825304 Common - succinate dehydrogenase cytochrome b-556 subunit A1C_00930 84 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 157826356 Common - Metal-dependent hydrolase of the beta-lactamase superfamily I A1C_06725 92 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 157825190 Common rpsR 30S ribosomal protein S18 A1C_00345 207 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 157826116 Common - Trans-regulatory protein ExsB A1C_05455 176 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 157825302 Common - Periplasmic serine protease A1C_00920 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 157825876 Common - hypothetical protein A1C_04075 160 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 157825204 Common - hypothetical protein A1C_00415 9 None None None 157825518 Common - Cell surface antigen-like protein Sca7 A1C_02115 1 None None None 157826207 Common - hypothetical protein A1C_05920 35 None None None 157825141 Pathogen - hypothetical protein A1C_00090 1 None None None 157826045 Common rpmD 50S ribosomal protein L30 A1C_05015 139 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 157825992 Common - Patatin-like phospholipase A1C_04710 32 COG3621 COG3621, Patatin General function prediction only 157825173 Common - F0F1 ATP synthase subunit B' A1C_00260 31 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 157825148 Common - Cell surface antigen-like protein Sca10 A1C_00125 1 None None None 157825531 Common - hypothetical protein A1C_02190 2 None None None 157825983 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase A1C_04665 210 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 157825824 Common - hypothetical protein A1C_03805 1 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 157825189 Common - 30S ribosomal protein S6 A1C_00340 147 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 157826326 Common - hypothetical protein A1C_06575 236 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 157825182 Common - hypothetical protein A1C_00305 205 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 157825622 Pathogen - hypothetical protein A1C_02695 1 COG5410 COG5410, Uncharacterized protein conserved in bacteria Function unknown 157826333 Common - hypothetical protein A1C_06610 2 None None None 157825180 Common - Poly(A) polymerase A1C_00295 188 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 157826000 Pathogen rpmI 50S ribosomal protein L35 A1C_04760 1 None None None 157826092 Common - 2-polyprenylphenol 6-hydroxylase A1C_05260 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 157825603 Pathogen - hypothetical protein A1C_02590 1 None None None 157825573 Pathogen - hypothetical protein A1C_02430 1 None None None 157825786 Pathogen - hypothetical protein A1C_03585 1 None None None 157826168 Pathogen - hypothetical protein A1C_05725 1 None None None 157825968 Common - sco2 protein precursor A1C_04570 113 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 157825506 Common - hypothetical protein A1C_02035 88 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 157826258 Common - F0F1 ATP synthase subunit gamma A1C_06195 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 157826145 Common tgt queuine tRNA-ribosyltransferase A1C_05610 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 157826133 Pathogen - hypothetical protein A1C_05550 1 COG0789 SoxR, Predicted transcriptional regulators Transcription 157825805 Common - biotin--protein ligase A1C_03700 201 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 157825165 Common recF recombination protein F A1C_00220 165 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 157825541 Common thyX FAD-dependent thymidylate synthase A1C_02260 32 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 157825671 Common - Protocatechuate-3,4-dioxygenase, beta subunit A1C_02965 23 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 157825500 Common - putative monovalent cation/H+ antiporter subunit D A1C_02005 191 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 157825525 Common - Cell surface antigen Sca3 A1C_02150 1 None None None 157825918 Pathogen - hypothetical protein A1C_04290 1 None None None 157825437 Common - tail-specific protease precursor A1C_01690 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 157825725 Common recR recombination protein RecR A1C_03255 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 157826090 Common - hypothetical protein A1C_05250 1 None None None 157825971 Common - virulence factor mviN A1C_04585 189 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 157825644 Pathogen - hypothetical protein A1C_02805 1 None None None 157825152 Pathogen - hypothetical protein A1C_00145 1 None None None 157825366 Common kgd alpha-ketoglutarate decarboxylase A1C_01300 149 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 157826308 Common - MFS type sugar transporter A1C_06485 1 None None None 157825688 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase A1C_03050 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 157825921 Common - transposase, mutator type A1C_04305 14 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826231 Common dnaE DNA polymerase III subunit alpha A1C_06050 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 157825737 Pathogen - hypothetical protein A1C_03315 1 None None None 157825858 Common - NADH dehydrogenase subunit N A1C_03985 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 157826144 Common - prevent-host-death family protein A1C_05605 14 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 157825159 Pathogen - hypothetical protein A1C_00180 1 None None None 157825553 Common - Periplasmic protein TonB A1C_02320 13 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 157826376 Pathogen - hypothetical protein A1C_06840 1 None None None 157825271 Common rpmB 50S ribosomal protein L28 A1C_00750 108 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 157825810 Common - hypothetical protein A1C_03725 1 COG5448 COG5448, Uncharacterized conserved protein Function unknown 157826187 Common - acetyl-CoA acetyltransferase A1C_05820 170 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 157825441 Common - WD40-like repeat protein A1C_01710 75 COG1520 COG1520, FOG: WD40-like repeat Function unknown 157825260 Pathogen - Predicted esterase of the alpha-beta hydrolase superfamily protein A1C_00695 1 None None None 157826058 Common rplV 50S ribosomal protein L22 A1C_05080 220 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 157825887 Common - 5-Formyltetrahydrofolate cyclo-ligase A1C_04130 1 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 157825443 Common rpsI 30S ribosomal protein S9 A1C_01720 219 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 157825696 Pathogen - Membrane-fusion protein component of the RND family transporter A1C_03110 1 None None None 157826129 Common - hypothetical protein A1C_05530 1 None None None 157825355 Common - Hydrophobe/amphiphile efflux-1 HAE1 family protein A1C_01215 1 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 157825565 Common - lipid-A-disaccharide synthase A1C_02380 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 157825458 Common - hypothetical protein A1C_01795 161 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 157826154 Common - Proline/betaine transporter A1C_05655 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 157826114 Common clpX ATP-dependent protease ATP-binding subunit A1C_05445 231 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 157825538 Common - Membrane proteins related to metalloendopeptidase A1C_02235 26 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 157825730 Pathogen - hypothetical protein A1C_03280 1 None None None 157825907 Common clpP ATP-dependent Clp protease proteolytic subunit A1C_04235 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 157826011 Common rpsU 30S ribosomal protein S21 A1C_04825 3 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 157825436 Common - DNA topoisomerase IV subunit B A1C_01685 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 157825792 Common - Polypeptide deformylase A1C_03615 190 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 157825489 Common - Cytochrome b A1C_01950 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 157825659 Pathogen - hypothetical protein A1C_02905 1 None None None 157825633 Common - hypothetical protein A1C_02750 6 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 157825369 Common - hypothetical protein A1C_01315 119 COG4105 ComL, DNA uptake lipoprotein General function prediction only 157825915 Pathogen - hypothetical protein A1C_04275 1 None None None 157825606 Common - Transposase A1C_02605 1 None None None 157826142 Common - DNA ligase A1C_05595 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 157825414 Pathogen - hypothetical protein A1C_01575 1 None None None 157825946 Common uvrC excinuclease ABC subunit C A1C_04430 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 157825716 Common - Thiol:disulfide interchange protein DsbA A1C_03210 78 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 157825749 Common - hypothetical protein A1C_03375 1 None None None 157825847 Pathogen - hypothetical protein A1C_03930 1 None None None 157825935 Common - hypothetical protein A1C_04375 1 None None None 157826358 Common - hypothetical protein A1C_06735 33 COG0795 COG0795, Predicted permeases General function prediction only 157825692 Pathogen - hypothetical protein A1C_03070 1 None None None 157826209 Common recA recombinase A A1C_05930 244 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 157825589 Common - Two-domain glycosyltransferase A1C_02510 208 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 157826320 Common - Predicted transcriptional regulator A1C_06545 1 None None None 157825285 Pathogen trmD tRNA (guanine-N(1)-)-methyltransferase A1C_00835 1 None None None 157826250 Common - NADH dehydrogenase I chain H A1C_06145 186 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 157826069 Common - Antitoxin of toxin-antitoxin system Phd A1C_05135 2 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 157825804 Pathogen - hypothetical protein A1C_03690 1 None None None 157825424 Common - mitochondrial protease A1C_01625 201 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 157825178 Common - ComEC/Rec2 family protein A1C_00285 81 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 157825569 Common - hypothetical protein A1C_02410 1 None None None 157826299 Common - cytosine deaminase A1C_06440 208 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 157826265 Common - Penicillin-binding protein 1A family A1C_06240 201 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 157825215 Common - stage 0 sporulation protein J A1C_00470 188 COG1475 Spo0J, Predicted transcriptional regulators Transcription 157825195 Common sdhB succinate dehydrogenase iron-sulfur subunit A1C_00370 1 None None None 157826005 Pathogen - hypothetical protein A1C_04785 1 None None None 157825760 Common - hypothetical protein A1C_03440 1 None None None 157825257 Pathogen - hypothetical protein A1C_00680 1 None None None 157826327 Common glyS glycyl-tRNA synthetase subunit beta A1C_06580 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 157826064 Common rpsJ 30S ribosomal protein S10 A1C_05110 231 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 157825480 Common - hypothetical protein A1C_01905 1 None None None 157825991 Pathogen - hypothetical protein A1C_04705 1 None None None 157825197 Common - succinate dehydrogenase catalytic subunit A1C_00380 190 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 157825240 Common - protein-export membrane protein A1C_00595 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 157826082 Common - hypothetical protein A1C_05210 91 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 157825359 Common - coproporphyrinogen III oxidase A1C_01265 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 157825830 Common - hypothetical protein A1C_03835 3 None None None 157825135 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase A1C_00050 143 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 157825945 Common - Probable toxin of toxin-antitoxin system A1C_04425 4 None None None 157825326 Common aspS aspartyl-tRNA synthetase A1C_01040 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157826342 Pathogen - hypothetical protein A1C_06655 1 None None None 157825548 Common hisS histidyl-tRNA synthetase A1C_02295 244 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825263 Common - Acyl-CoA desaturase 1 A1C_00710 67 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 157826227 Common - Signal recognition particle-docking protein FtsY A1C_06030 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 157825794 Common - hypothetical protein A1C_03625 3 None None None 157826122 Common - Bicyclomycin resistance protein A1C_05485 129 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 157825636 Common - malic enzyme A1C_02765 208 COG0281 SfcA, Malic enzyme Energy production and conversion 157825427 Common thrS threonyl-tRNA synthetase A1C_01640 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825502 Common - putative monovalent cation/H+ antiporter subunit D A1C_02015 207 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 157825996 Common - Acetyltransferase A1C_04740 1 None None None 157825974 Common - ATP-dependent DNA helicase RecG A1C_04600 235 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 157825617 Common - NADH dehydrogenase subunit B A1C_02670 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 157825986 Common - hypothetical protein A1C_04680 22 COG2938 COG2938, Uncharacterized conserved protein Function unknown 157826361 Common - succinyl-diaminopimelate desuccinylase A1C_06750 214 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 157825373 Common - Heat shock protease A1C_01335 202 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 157826242 Common - NADH dehydrogenase subunit J A1C_06105 156 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 157825595 Pathogen - hypothetical protein A1C_02550 1 None None None 157825312 Common - 30S ribosomal protein S7 A1C_00970 246 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 157826369 Common - hypothetical protein A1C_06790 108 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 157825514 Common - virD4 protein A1C_02075 73 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 157826073 Common - Ecotin precursor A1C_05165 9 COG4574 Eco, Serine protease inhibitor ecotin General function prediction only 157826249 Pathogen - NADH dehydrogenase subunit H A1C_06140 2 None None None 157825381 Common - hypothetical protein A1C_01375 1 COG3838 VirB2, Type IV secretory pathway, VirB2 components (pilins) Intracellular trafficking and secretion 157825752 Pathogen - hypothetical protein A1C_03390 1 None None None 157826197 Common - hypothetical protein A1C_05870 45 COG3494 COG3494, Uncharacterized protein conserved in bacteria Function unknown 157825232 Common queF 7-cyano-7-deazaguanine reductase A1C_00555 82 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 157826026 Common - hypothetical protein A1C_04900 1 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 157825309 Common sdhA succinate dehydrogenase flavoprotein subunit A1C_00955 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 157826214 Pathogen - hypothetical protein A1C_05965 1 None None None 157825646 Common - ADP,ATP carrier protein A1C_02830 7 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 157825936 Common - Ankyrin repeat A1C_04380 4 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 157825422 Common - Cytochrome d ubiquinol oxidase subunit II A1C_01615 149 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 157825332 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B A1C_01070 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 157825853 Common - cysteine desulfurase A1C_03960 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 157825849 Common - hypothetical protein A1C_03940 4 None None None 157825313 Common - elongation factor G A1C_00975 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 157826225 Common rpmF 50S ribosomal protein L32 A1C_06020 94 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 157825577 Common - Putatie DNA processing protein DprA A1C_02450 20 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 157825288 Common - hypothetical protein A1C_00850 37 COG3750 COG3750, Uncharacterized protein conserved in bacteria Function unknown 157826233 Common - hypothetical protein A1C_06060 13 COG3164 COG3164, Predicted membrane protein Function unknown 157825755 Common - hypothetical protein A1C_03405 1 None None None 157825294 Common ruvC Holliday junction resolvase A1C_00880 198 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 157825439 Common - hypothetical protein A1C_01700 91 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 157826131 Common - Guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein A1C_05540 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 157825546 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase A1C_02285 217 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 157825575 Common - DNA topoisomerase I A1C_02440 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 157826111 Common - hypothetical protein A1C_05420 1 None None None 157825916 Pathogen - hypothetical protein A1C_04280 1 None None None 157825664 Common - Rare lipoprotein A precursor A1C_02930 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 157826289 Pathogen - hypothetical protein A1C_06380 1 None None None 157825961 Common - HAD-superfamily subfamily IIA hydrolase A1C_04515 59 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 157826341 Pathogen - hypothetical protein A1C_06650 1 None None None 157825206 Common - Tellurite resistance protein-related protein A1C_00425 23 None None None 157825328 Common - Integral membrane protein A1C_01050 127 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 157825516 Pathogen - Cell surface antigen-like protein Sca7 A1C_02105 1 None None None 157825462 Common - Cell division protein FtsQ A1C_01815 8 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 157825758 Pathogen - hypothetical protein A1C_03420 1 None None None 157825727 Pathogen - hypothetical protein A1C_03265 1 None None None 157826371 Common rpmG 50S ribosomal protein L33 A1C_06800 124 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 157826118 Common - hypothetical protein A1C_05465 3 None None None 157825922 Common - Transposase A1C_04310 42 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 157826047 Common rplR 50S ribosomal protein L18 A1C_05025 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 157825863 Common - replicative DNA helicase A1C_04010 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 157825184 Common - hypothetical protein A1C_00315 3 None None None 157825142 Common - acetoacetyl-CoA reductase A1C_00095 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 157825482 Common - hypothetical protein A1C_01915 18 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 157825864 Common - Putative to amino acid permeases A1C_04015 1 None None None 157826094 Pathogen - hypothetical protein A1C_05270 1 None None None 157826160 Common - aspartate kinase A1C_05685 233 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 157825499 Common - Protease II A1C_02000 102 COG1770 PtrB, Protease II Amino acid transport and metabolism 157825675 Common - Soluble lytic murein transglycosylase precursor A1C_02985 147 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 157825620 Common - hypothetical protein A1C_02685 20 COG4765 COG4765, Uncharacterized protein conserved in bacteria Function unknown 157825826 Pathogen - hypothetical protein A1C_03815 1 None None None 157826120 Common - Multidrug resistance protein A1C_05475 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 157825262 Common - O-sialoglycoprotein endopeptidase A1C_00705 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 157825222 Common argS arginyl-tRNA synthetase A1C_00505 248 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825245 Common rpsB 30S ribosomal protein S2 A1C_00620 231 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 157826256 Common atpC F0F1 ATP synthase subunit epsilon A1C_06185 47 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 157825885 Common - hypothetical protein A1C_04120 17 COG1723 COG1723, Uncharacterized conserved protein Function unknown 157825985 Common - Transcription-repair coupling factor A1C_04675 220 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 157826056 Common rplP 50S ribosomal protein L16 A1C_05070 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 157825532 Common - hypothetical protein A1C_02195 1 None None None 157825490 Common - Cytochrome c1, heme protein precursor A1C_01955 75 COG2857 CYT1, Cytochrome c1 Energy production and conversion 157826003 Common rnpA ribonuclease P A1C_04775 192 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 157825411 Common - peptide deformylase A1C_01560 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 157826101 Common - Putative deoxyribonuclease, hydrolase A1C_05325 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 157826018 Common - propionyl-CoA carboxylase beta chain precursor A1C_04860 215 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 157825551 Common - TolQ protein A1C_02310 152 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 157826106 Common valS valyl-tRNA synthetase A1C_05365 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 157825878 Pathogen - hypothetical protein A1C_04085 1 None None None 157825900 Pathogen - Predicted acetyltransferase A1C_04200 1 None None None 157825868 Common - N6-adenine-specific methylase A1C_04035 203 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 157825959 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase A1C_04505 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 157825353 Pathogen - hypothetical protein A1C_01180 1 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 157825771 Pathogen - hypothetical protein A1C_03505 1 None None None 157825720 Common - Acylamino-acid-releasing enzyme A1C_03230 119 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 157825686 Common lspA lipoprotein signal peptidase A1C_03040 190 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 157825347 Common - hypothetical protein A1C_01145 2 None None None 157825340 Common - hypothetical protein A1C_01110 1 None None None 157826286 Pathogen - 190-KDa cell surface antigen A1C_06365 1 None None None 157826034 Common - hypothetical protein A1C_04960 141 COG0628 PerM, Predicted permease General function prediction only 157825669 Pathogen - hypothetical protein A1C_02955 1 None None None 157826183 Pathogen - hypothetical protein A1C_05800 1 None None None 157825894 Pathogen - hypothetical protein A1C_04165 1 None None None 157825157 Common - Sco2 protein precursor A1C_00170 84 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 157825526 Pathogen - hypothetical protein A1C_02155 1 None None None 157825128 Common - O-antigen export system ATP-binding protein RfbE A1C_00015 242 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 157825581 Common - Holliday junction resolvase-like protein A1C_02470 182 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 157825555 Common - hypothetical protein A1C_02330 203 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 157826305 Common - single-strand DNA-binding protein A1C_06470 199 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 157826178 Common - lipoyl synthase A1C_05775 191 COG0320 LipA, Lipoate synthase Coenzyme metabolism 157825817 Common prfA peptide chain release factor 1 A1C_03760 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 157825154 Pathogen - Cell surface antigen-like protein Sca10 A1C_00155 1 None None None