Psychrobacter sp. PRwf-1, complete genome NC_009524 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 148652555 Common - ABC transporter related PsycPRwf_0746 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 148652550 Common - major facilitator superfamily MFS_1 PsycPRwf_0741 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148653483 Common - oxidoreductase FAD/NAD(P)-binding domain protein PsycPRwf_1686 116 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 148653652 Common - Dihydroorotase and related cyclic amidohydrolase-like protein PsycPRwf_1855 202 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 148652940 Common - sulfate ABC transporter, inner membrane subunit CysT PsycPRwf_1134 228 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 148652563 Common - Phosphoribosylanthranilate isomerase PsycPRwf_0754 198 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 148653094 Nonpathogen - hypothetical protein PsycPRwf_1291 1 None None None 148653896 Common fadA 3-ketoacyl-CoA thiolase PsycPRwf_2099 175 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 148653613 Common - Fimbrial protein-like protein PsycPRwf_1816 17 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 148652894 Common - putative outer membrane adhesin like proteiin PsycPRwf_1087 153 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 148652573 Common - hypothetical protein PsycPRwf_0764 10 None None None 148653925 Common - Uncharacterized protein-like protein PsycPRwf_2128 13 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 148652951 Common - drug resistance transporter, EmrB/QacA subfamily PsycPRwf_1145 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148653123 Common - hypothetical protein PsycPRwf_1321 5 COG3941 COG3941, Mu-like prophage protein General function prediction only 148653682 Common - ferric uptake regulator, Fur family PsycPRwf_1885 188 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 148654159 Common - thiamine pyrophosphate enzyme TPP binding domain protein PsycPRwf_2362 220 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 148653298 Common - amino acid permease-associated region PsycPRwf_1498 168 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 148652386 Common - putative endoribonuclease L-PSP PsycPRwf_0574 181 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 148652517 Nonpathogen - hypothetical protein PsycPRwf_0706 1 None None None 148653996 Nonpathogen - hypothetical protein PsycPRwf_2199 1 None None None 148652272 Common - domain of unknown function DUF1730 PsycPRwf_0460 134 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 148652833 Common - hypothetical protein PsycPRwf_1026 131 None None None 148653437 Common rpsF 30S ribosomal protein S6 PsycPRwf_1640 194 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 148653348 Common - protein kinase PsycPRwf_1550 135 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 148653642 Common - PfkB domain protein PsycPRwf_1845 156 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 148653701 Common - type IV pilus biogenesis/stability protein PilW PsycPRwf_1904 56 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 148653495 Common - NADH dehydrogenase subunit B PsycPRwf_1698 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 148653917 Common - hypothetical protein PsycPRwf_2120 24 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 148653176 Common - methionine-R-sulfoxide reductase PsycPRwf_1374 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 148652720 Common - protein of unknown function DUF558 PsycPRwf_0913 169 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 148653157 Common - transposase IS3/IS911 family protein PsycPRwf_1355 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652522 Common - copper resistance B precursor PsycPRwf_0711 43 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 148653120 Common - hypothetical protein PsycPRwf_1318 11 None None None 148653549 Common - Nucleotidyl transferase PsycPRwf_1752 141 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 148654133 Nonpathogen - hypothetical protein PsycPRwf_2336 1 None None None 148652205 Common - DNA topoisomerase I PsycPRwf_0393 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 148652810 Common - transcriptional regulator, AraC family PsycPRwf_1003 158 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 148653589 Common - sodium:neurotransmitter symporter PsycPRwf_1792 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 148653373 Common - RNA polymerase, sigma 70 subunit, RpoD PsycPRwf_1575 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 148652438 Common - transposase, IS605 OrfB family PsycPRwf_0626 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652785 Common - glycosyl transferase, group 1 PsycPRwf_0978 209 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 148652448 Common - alanine dehydrogenase/PNT domain protein PsycPRwf_0636 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 148652226 Common - formyltetrahydrofolate deformylase PsycPRwf_0414 217 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 148653669 Common - hypothetical protein PsycPRwf_1872 23 None None None 148653801 Common - glutathione reductase PsycPRwf_2004 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 148653639 Nonpathogen - hypothetical protein PsycPRwf_1842 1 None None None 148652938 Common - sulfate ABC transporter, periplasmic sulfate-binding protein PsycPRwf_1132 92 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 148654048 Common - peptidylprolyl isomerase, FKBP-type PsycPRwf_2251 141 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 148653537 Common - lipoprotein releasing system, transmembrane protein, LolC/E family PsycPRwf_1740 198 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 148653946 Common - septum site-determining protein MinC PsycPRwf_2149 84 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 148654007 Common glyS glycyl-tRNA synthetase subunit beta PsycPRwf_2210 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 148651974 Common - ribosome-binding factor A PsycPRwf_0158 165 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 148653668 Common - Lytic transglycosylase, catalytic PsycPRwf_1871 174 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 148653688 Common - GTP-binding protein, HSR1-related PsycPRwf_1891 181 COG0218 COG0218, Predicted GTPase General function prediction only 148652322 Common - integral membrane protein MviN PsycPRwf_0510 189 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 148654069 Common - thiamine biosynthesis protein ThiC PsycPRwf_2272 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 148654035 Common - Endonuclease/exonuclease/phosphatase PsycPRwf_2238 66 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 148653934 Common - translation initiation factor IF-3 PsycPRwf_2137 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 148652958 Common - ABC transporter related PsycPRwf_1152 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 148653429 Common - iron-sulfur cluster assembly protein IscA PsycPRwf_1631 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 148652250 Common rplE 50S ribosomal protein L5 PsycPRwf_0438 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 148652233 Common - rod shape-determining protein MreC PsycPRwf_0421 154 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 148653771 Common - hypothetical protein PsycPRwf_1974 3 None None None 148651925 Common - ABC transporter related PsycPRwf_0108 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 148653844 Common - OsmC family protein PsycPRwf_2047 90 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 148652137 Common - ABC transporter related PsycPRwf_0325 238 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 148652257 Common rplO 50S ribosomal protein L15 PsycPRwf_0445 181 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 148652485 Common - arsenate reductase PsycPRwf_0674 110 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 148654162 Common - protein of unknown function DUF107 PsycPRwf_2365 61 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 148651818 Common rpmH 50S ribosomal protein L34 PsycPRwf_0001 198 None None None 148651995 Common - Glutamate--tRNA ligase PsycPRwf_0179 247 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 148653571 Common - transcriptional regulator CysB-like protein PsycPRwf_1774 176 COG0583 LysR, Transcriptional regulator Transcription 148652557 Nonpathogen - hypothetical protein PsycPRwf_0748 16 None None None 148653232 Common - carboxyl-terminal protease PsycPRwf_1430 184 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 148652279 Common - SMC domain protein PsycPRwf_0467 199 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 148653347 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PsycPRwf_1549 199 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 148652754 Common rpsT 30S ribosomal protein S20 PsycPRwf_0947 196 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 148653384 Common - histone family protein DNA-binding protein PsycPRwf_1586 181 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 148652011 Common - transposase, IS605 OrfB family PsycPRwf_0195 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653786 Common - protein of unknown function DUF752 PsycPRwf_1989 77 COG4121 COG4121, Uncharacterized conserved protein Function unknown 148652631 Common - KpsF/GutQ family protein PsycPRwf_0822 148 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 148653409 Common - alanyl-tRNA synthetase PsycPRwf_1611 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652299 Common - lysine 2,3-aminomutase YodO family protein PsycPRwf_0487 125 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 148653134 Nonpathogen - hypothetical protein PsycPRwf_1332 1 None None None 148652982 Common - amine oxidase PsycPRwf_1176 68 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 148652907 Common - nuclease SbcCD, D subunit PsycPRwf_1100 90 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 148652796 Common - hypothetical protein PsycPRwf_0989 14 None None None 148653630 Common - efflux transporter, RND family, MFP subunit PsycPRwf_1833 170 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 148654145 Common - D-lactate dehydrogenase (cytochrome) PsycPRwf_2348 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 148652342 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PsycPRwf_0530 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 148652606 Common rpsI 30S ribosomal protein S9 PsycPRwf_0797 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 148653973 Common - major facilitator superfamily MFS_1 PsycPRwf_2176 81 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 148653679 Common - NAD+ synthetase PsycPRwf_1882 236 COG0171 NadE, NAD synthase Coenzyme metabolism 148653201 Common - peptidase S16, lon domain protein PsycPRwf_1399 89 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 148653116 Common - transposase IS3/IS911 family protein PsycPRwf_1314 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652636 Common - DNA repair protein RadA PsycPRwf_0827 202 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 148653390 Nonpathogen - hypothetical protein PsycPRwf_1592 1 None None None 148652042 Common - Na+/H+ antiporter NhaC PsycPRwf_0226 52 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 148653945 Common - hypothetical protein PsycPRwf_2148 8 None None None 148653078 Common - protein of unknown function DUF6, transmembrane PsycPRwf_1275 102 None None None 148652641 Common - transcription elongation factor GreA PsycPRwf_0832 204 COG0782 GreA, Transcription elongation factor Transcription 148652653 Common - cobalamin 5'-phosphate synthase PsycPRwf_0844 92 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 148652971 Common - Integrase, catalytic region PsycPRwf_1165 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652712 Common - replicative DNA helicase PsycPRwf_0905 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 148652857 Common - hypothetical protein PsycPRwf_1050 2 None None None 148652915 Common - phosphoadenosine phosphosulfate reductase PsycPRwf_1108 101 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 148652489 Common - Glutathione S-transferase, N-terminal domain PsycPRwf_0678 48 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652285 Common - DNA ligase, NAD-dependent PsycPRwf_0473 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 148652585 Common - RNA-binding S4 domain protein PsycPRwf_0776 103 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 148652819 Common - cytochrome P450 PsycPRwf_1012 64 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 148653466 Common - transposase, IS605 OrfB family PsycPRwf_1669 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653109 Common - hypothetical protein PsycPRwf_1307 3 None None None 148652764 Nonpathogen - hypothetical protein PsycPRwf_0957 1 None None None 148652334 Common - glutathione synthetase PsycPRwf_0522 129 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 148653068 Common - ATP--cobalamin adenosyltransferase PsycPRwf_1264 130 COG2096 COG2096, Uncharacterized conserved protein Function unknown 148653027 Common - hypothetical protein PsycPRwf_1222 13 None None None 148652212 Common - Shikimate kinase PsycPRwf_0400 202 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 148652096 Common - glutamate racemase PsycPRwf_0284 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 148654186 Common - protein of unknown function DUF37 PsycPRwf_2389 179 COG0759 COG0759, Uncharacterized conserved protein Function unknown 148654106 Common - thioredoxin PsycPRwf_2309 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 148652106 Common argS arginyl-tRNA synthetase PsycPRwf_0294 248 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652694 Common - RND efflux system, outer membrane lipoprotein, NodT family PsycPRwf_0887 124 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 148653402 Common - NUDIX hydrolase PsycPRwf_1604 87 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 148652769 Common - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PsycPRwf_0962 187 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 148653926 Common - hypothetical protein PsycPRwf_2129 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 148654071 Common - transposase, IS605 OrfB family PsycPRwf_2274 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653989 Common - AMP-dependent synthetase and ligase PsycPRwf_2192 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148653006 Common - putative AcnD-accessory protein PrpF PsycPRwf_1200 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 148651908 Common - hypothetical protein PsycPRwf_0091 7 COG2991 COG2991, Uncharacterized protein conserved in bacteria Function unknown 148651917 Common - Na(+)-translocating NADH-quinone reductase subunit A PsycPRwf_0100 39 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 148654102 Common - oxidoreductase related to nitroreductase-like protein PsycPRwf_2305 28 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 148652367 Common - hypothetical protein PsycPRwf_0555 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 148653042 Common - BCCT transporter PsycPRwf_1238 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 148652061 Common - UDP-glucose/GDP-mannose dehydrogenase PsycPRwf_0249 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 148652693 Nonpathogen - hypothetical protein PsycPRwf_0886 1 None None None 148653420 Common - ribosomal protein L11 methyltransferase PsycPRwf_1622 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 148652046 Common - glycosyl transferase, group 1 PsycPRwf_0230 201 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 148651845 Nonpathogen - hypothetical protein PsycPRwf_0028 1 None None None 148652862 Common - Integrase, catalytic region PsycPRwf_1055 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653072 Common - protein of unknown function UPF0061 PsycPRwf_1268 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 148653833 Common rpoB DNA-directed RNA polymerase subunit beta PsycPRwf_2036 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 148652084 Common - Glucose-6-phosphate isomerase PsycPRwf_0272 178 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 148653869 Common - polar amino acid ABC transporter, inner membrane subunit PsycPRwf_2072 173 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 148652403 Common - cytochrome c assembly protein PsycPRwf_0591 102 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 148652484 Common - Protein of unknown function DUF1971 PsycPRwf_0673 20 COG3615 TehB, Uncharacterized protein/domain, possibly involved in tellurite resistance Inorganic ion transport and metabolism 148652393 Common - nicotinate phosphoribosyltransferase PsycPRwf_0581 95 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 148653500 Common - magnesium transporter PsycPRwf_1703 184 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 148653591 Common - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ PsycPRwf_1794 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 148652315 Common hisD histidinol dehydrogenase PsycPRwf_0503 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 148652376 Common - uracil-xanthine permease PsycPRwf_0564 123 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 148653067 Common - cysteinyl-tRNA synthetase PsycPRwf_1263 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652439 Common - riboflavin biosynthesis protein RibF PsycPRwf_0627 211 COG0196 RibF, FAD synthase Coenzyme metabolism 148654042 Nonpathogen - hypothetical protein PsycPRwf_2245 13 None None None 148652166 Common - thiamine biosynthesis protein ThiS PsycPRwf_0354 5 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 148652869 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_1062 195 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 148653318 Common - Uncharacterized membrane protein-like protein PsycPRwf_1518 19 COG3949 COG3949, Uncharacterized membrane protein Function unknown 148654137 Common - TonB-dependent receptor PsycPRwf_2340 65 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 148654038 Common - hypothetical protein PsycPRwf_2241 3 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 148652744 Common - Endoribonuclease L-PSP PsycPRwf_0937 172 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 148653246 Common - NMT1/THI5-like protein PsycPRwf_1444 85 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 148653191 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PsycPRwf_1389 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652038 Common - molybdopterin biosynthesis MoaE protein PsycPRwf_0222 153 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 148651852 Common - protein of unknown function UPF0029 PsycPRwf_0035 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 148652850 Common - Na+/H+ antiporter NhaC PsycPRwf_1043 55 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 148653848 Common - hypothetical protein PsycPRwf_2051 20 None None None 148654183 Common - hypothetical protein PsycPRwf_2386 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 148653981 Common - phosphoserine phosphatase SerB PsycPRwf_2184 168 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 148652218 Common - lactoylglutathione lyase PsycPRwf_0406 107 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 148653392 Common - thiamine pyrophosphate enzyme domain protein TPP-binding PsycPRwf_1594 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 148653082 Nonpathogen - hypothetical protein PsycPRwf_1279 1 None None None 148653995 Common - AbgT putative transporter PsycPRwf_2198 40 COG2978 AbgT, Putative p-aminobenzoyl-glutamate transporter Coenzyme metabolism 148653744 Common - Long-chain fatty acid transport protein-like protein PsycPRwf_1947 14 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 148652672 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_0863 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652929 Common - hypothetical protein PsycPRwf_1123 13 None None None 148652024 Common - Beta-ketoacyl synthase-like protein PsycPRwf_0208 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148653316 Common - protein of unknown function DUF924 PsycPRwf_1516 63 COG3803 COG3803, Uncharacterized protein conserved in bacteria Function unknown 148653609 Common - Uncharacterized protein-like protein PsycPRwf_1812 42 COG3651 COG3651, Uncharacterized protein conserved in bacteria Function unknown 148653603 Common - protein kinase PsycPRwf_1806 87 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 148653743 Nonpathogen - hypothetical protein PsycPRwf_1946 1 None None None 148653199 Common - Cobyrinic acid a,c-diamide synthase PsycPRwf_1397 225 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 148653015 Common - hypothetical protein PsycPRwf_1209 2 None None None 148653453 Common - MATE efflux family protein PsycPRwf_1656 170 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 148653418 Common - penicillin-binding protein 1B PsycPRwf_1620 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 148652827 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein PsycPRwf_1020 94 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 148652310 Common - transport-associated PsycPRwf_0498 61 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 148653550 Common - aminoglycoside phosphotransferase PsycPRwf_1753 89 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 148654125 Common - dinucleoside polyphosphate hydrolase PsycPRwf_2328 112 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 148653271 Common - hypothetical protein PsycPRwf_1470 36 None None None 148653025 Common - hypothetical protein PsycPRwf_1219 10 None None None 148654082 Common - Riboflavin synthase PsycPRwf_2285 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 148653731 Common - 3-isopropylmalate dehydrogenase PsycPRwf_1934 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 148652976 Common - NADH:flavin oxidoreductase/NADH oxidase PsycPRwf_1170 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 148653784 Common - YciI-like protein PsycPRwf_1987 65 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 148652806 Common - Alcohol dehydrogenase, zinc-binding domain protein PsycPRwf_0999 204 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 148654172 Common - domain of unknown function DUF1731 PsycPRwf_2375 105 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 148653555 Common - Serine-type D-Ala-D-Ala carboxypeptidase PsycPRwf_1758 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 148652140 Common - cytochrome d ubiquinol oxidase, subunit II PsycPRwf_0328 153 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 148653233 Common - phosphoglyceromutase PsycPRwf_1431 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 148652302 Common fadE acyl-CoA dehydrogenase PsycPRwf_0490 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148652171 Common - GatB/Yqey domain protein PsycPRwf_0359 151 COG1610 COG1610, Uncharacterized conserved protein Function unknown 148653147 Common - Phage-related protein predicted endonuclease-like protein PsycPRwf_1345 19 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 148652884 Common - hypothetical protein PsycPRwf_1077 65 COG0583 LysR, Transcriptional regulator Transcription 148652684 Nonpathogen - hypothetical protein PsycPRwf_0875 1 None None None 148653852 Common - Ferritin, Dps family protein PsycPRwf_2055 84 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 148652416 Nonpathogen - hypothetical protein PsycPRwf_0604 1 None None None 148653698 Common hisS histidyl-tRNA synthetase PsycPRwf_1901 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148653870 Common - polar amino acid ABC transporter, inner membrane subunit PsycPRwf_2073 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 148653327 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit PsycPRwf_1529 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 148653413 Common - transposase, IS4 family protein PsycPRwf_1615 8 None None None 148653208 Common - AFG1-family ATPase PsycPRwf_1406 101 COG1485 COG1485, Predicted ATPase General function prediction only 148653966 Common - integral membrane protein-like protein PsycPRwf_2169 51 COG0392 COG0392, Predicted integral membrane protein Function unknown 148652236 Common - ribonuclease, Rne/Rng family PsycPRwf_0424 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 148652498 Nonpathogen - hypothetical protein PsycPRwf_0687 1 None None None 148653543 Common - Cbb3-type cytochrome oxidase component PsycPRwf_1746 6 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 148652991 Common - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding PsycPRwf_1185 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 148653004 Common - methylcitrate synthase PsycPRwf_1198 194 COG0372 GltA, Citrate synthase Energy production and conversion 148651965 Common - dephospho-CoA kinase PsycPRwf_0148 208 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 148653280 Common - hypothetical protein PsycPRwf_1479 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148651944 Common - sodium/hydrogen exchanger PsycPRwf_0127 157 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 148653757 Common - Lysine exporter protein (LYSE/YGGA) PsycPRwf_1960 80 COG1279 COG1279, Lysine efflux permease General function prediction only 148653107 Common - hypothetical protein PsycPRwf_1305 2 None None None 148651952 Common - UDP-N-acetylmuramyl-tripeptide synthetase PsycPRwf_0135 209 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 148652244 Common rpsC 30S ribosomal protein S3 PsycPRwf_0432 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 148653815 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein PsycPRwf_2018 140 COG1146 COG1146, Ferredoxin Energy production and conversion 148654179 Common - Fmu (Sun) domain protein PsycPRwf_2382 206 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 148653712 Common - protein of unknown function UPF0066 PsycPRwf_1915 54 COG1720 COG1720, Uncharacterized conserved protein Function unknown 148653838 Common - NusG antitermination factor PsycPRwf_2041 215 COG0250 NusG, Transcription antiterminator Transcription 148653906 Common - Na+/Ca+ antiporter, CaCA family PsycPRwf_2109 113 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 148653822 Common - amidophosphoribosyltransferase-like protein PsycPRwf_2025 17 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 148652195 Common - (p)ppGpp synthetase I, SpoT/RelA PsycPRwf_0383 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 148654050 Common - Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)-like protein PsycPRwf_2253 227 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148654009 Common - phage shock protein C, PspC PsycPRwf_2212 40 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 148652124 Common - Rhomboid family protein PsycPRwf_0312 65 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 148653440 Common - competence/damage-inducible protein CinA PsycPRwf_1643 162 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 148653210 Common - hypothetical protein PsycPRwf_1408 2 None None None 148653463 Common - copper ion binding protein PsycPRwf_1666 110 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 148654158 Common - coproporphyrinogen III oxidase PsycPRwf_2361 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 148652901 Common - ThiJ/PfpI domain protein PsycPRwf_1094 103 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 148654141 Common - Uncharacterized protein-like protein PsycPRwf_2344 30 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 148653367 Common - WD40 domain protein beta Propeller PsycPRwf_1569 144 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 148654059 Common - Uroporphyrinogen-III synthase-like protein PsycPRwf_2262 2 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 148653355 Common - thioesterase superfamily protein PsycPRwf_1557 138 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 148654033 Common - protein of unknown function DUF465 PsycPRwf_2236 12 COG2841 COG2841, Uncharacterized protein conserved in bacteria Function unknown 148651820 Common - DNA polymerase III, beta subunit PsycPRwf_0003 213 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 148652005 Common - ATP synthase F0, B subunit PsycPRwf_0189 89 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 148654115 Common rpmI 50S ribosomal protein L35 PsycPRwf_2318 155 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 148652777 Nonpathogen - hypothetical protein PsycPRwf_0970 1 None None None 148652594 Common - ubiquinone/menaquinone biosynthesis methyltransferase PsycPRwf_0785 213 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 148653796 Common - Alpha/beta hydrolase fold-3 domain protein PsycPRwf_1999 137 COG0657 Aes, Esterase/lipase Lipid metabolism 148652541 Common - Integrase, catalytic region PsycPRwf_0731 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148651865 Common - ABC transporter related PsycPRwf_0048 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 148653455 Common - acetyl-CoA carboxylase, biotin carboxylase PsycPRwf_1658 222 COG0439 AccC, Biotin carboxylase Lipid metabolism 148652185 Common - signal peptidase I PsycPRwf_0373 206 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 148653842 Common - hypothetical protein PsycPRwf_2045 21 None None None 148652365 Common - DNA polymerase III subunit epsilon PsycPRwf_0553 56 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 148652715 Common apaH diadenosine tetraphosphatase PsycPRwf_0908 81 None None None 148653781 Common - tRNA pseudouridine synthase D, TruD PsycPRwf_1984 75 COG0585 COG0585, Uncharacterized conserved protein Function unknown 148653055 Common - transaldolase B PsycPRwf_1251 192 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 148653751 Common - chromosome segregation and condensation protein ScpA PsycPRwf_1954 141 COG1354 COG1354, Uncharacterized conserved protein Function unknown 148653965 Common - cytochrome c-type biogenesis protein CcmE PsycPRwf_2168 92 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 148653286 Common - TonB-dependent receptor, plug PsycPRwf_1485 128 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 148652615 Common - Nucleoside-triphosphate--adenylate kinase PsycPRwf_0806 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 148653724 Common tgt queuine tRNA-ribosyltransferase PsycPRwf_1927 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 148653567 Common - MscS Mechanosensitive ion channel PsycPRwf_1770 209 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148651933 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_0116 152 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148652158 Common - acetate kinase PsycPRwf_0346 161 COG0282 ackA, Acetate kinase Energy production and conversion 148653758 Common - multiple antibiotic resistance (MarC)-related protein PsycPRwf_1961 157 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 148653562 Common - Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PsycPRwf_1765 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 148653184 Common - dihydroxy-acid dehydratase PsycPRwf_1382 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 148652964 Common - protein of unknown function DUF819 PsycPRwf_1158 23 COG5505 COG5505, Predicted integral membrane protein Function unknown 148652101 Common - peptide methionine sulfoxide reductase PsycPRwf_0289 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 148652057 Common - DegT/DnrJ/EryC1/StrS aminotransferase PsycPRwf_0245 206 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 148653089 Common - hypothetical protein PsycPRwf_1286 3 COG1315 COG1315, Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain DNA replication, recombination, and repair 148653016 Common - hypoxanthine-guanine phosphoribosyltransferase PsycPRwf_1210 150 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 148653525 Common - recombination protein RecR PsycPRwf_1728 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 148652520 Common - protein of unknown function DUF411 PsycPRwf_0709 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 148653217 Common - NLPA lipoprotein PsycPRwf_1415 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 148652624 Common - aminotransferase, class I and II PsycPRwf_0815 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 148652235 Common - maf protein PsycPRwf_0423 192 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 148653956 Common - response regulator receiver protein PsycPRwf_2159 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 148653051 Common - RarD protein, DMT superfamily transporter PsycPRwf_1247 102 COG2962 RarD, Predicted permeases General function prediction only 148651910 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_0093 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 148651831 Common - choline/carnitine/betaine transporter PsycPRwf_0014 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 148653334 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_1536 159 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148652468 Common - Catalase PsycPRwf_0656 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 148652078 Common kgd alpha-ketoglutarate decarboxylase PsycPRwf_0266 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 148652675 Common - Three-deoxy-D-manno-octulosonic-acid transferase domain protein PsycPRwf_0866 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 148652666 Common - GCN5-related N-acetyltransferase PsycPRwf_0857 61 COG0456 RimI, Acetyltransferases General function prediction only 148653221 Common - phosphoribosylamine--glycine ligase PsycPRwf_1419 233 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 148653142 Nonpathogen - hypothetical protein PsycPRwf_1340 1 None None None 148653305 Common - transposase IS3/IS911 family protein PsycPRwf_1505 53 None None None 148651895 Common - protein of unknown function DUF124 PsycPRwf_0078 75 COG2013 COG2013, Uncharacterized conserved protein Function unknown 148653178 Common - Substrate-binding region of ABC-type glycine betaine transport system PsycPRwf_1376 187 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 148652510 Common - cation efflux protein PsycPRwf_0699 124 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 148653723 Common - hypothetical protein PsycPRwf_1926 65 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 148652933 Common - N-6 DNA methylase PsycPRwf_1127 159 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 148653239 Common - hypothetical protein PsycPRwf_1437 2 None None None 148652036 Common - molybdenum cofactor biosynthesis protein C PsycPRwf_0220 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 148651883 Common - Amidohydrolase 3 PsycPRwf_0066 98 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 148652920 Common - phospholipase D/Transphosphatidylase PsycPRwf_1113 150 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 148653540 Common - hypothetical protein PsycPRwf_1743 4 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 148652783 Nonpathogen - hypothetical protein PsycPRwf_0976 1 None None None 148653875 Nonpathogen - hypothetical protein PsycPRwf_2078 1 None None None 148653979 Nonpathogen - hypothetical protein PsycPRwf_2182 1 None None None 148653587 Common - Endonuclease/exonuclease/phosphatase PsycPRwf_1790 22 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 148653625 Common - acetylglutamate kinase PsycPRwf_1828 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 148652947 Common - Arsenate resistance ArsH PsycPRwf_1141 63 COG0431 COG0431, Predicted flavoprotein General function prediction only 148652479 Common - nitrate reductase molybdenum cofactor assembly chaperone PsycPRwf_0668 52 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 148653803 Common - pantetheine-phosphate adenylyltransferase PsycPRwf_2006 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 148653371 Common - DNA uptake lipoprotein-like protein PsycPRwf_1573 125 COG4105 ComL, DNA uptake lipoprotein General function prediction only 148653573 Common - luciferase family protein PsycPRwf_1776 110 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 148653948 Common - cell division topological specificity factor MinE PsycPRwf_2151 37 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 148652049 Common - Integrase, catalytic region PsycPRwf_0234 141 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652001 Common - periplasmic solute binding protein PsycPRwf_0185 75 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 148652503 Common - two component transcriptional regulator, winged helix family PsycPRwf_0692 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148652381 Common - D-3-phosphoglycerate dehydrogenase PsycPRwf_0569 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 148653022 Common - phage integrase family protein PsycPRwf_1216 104 COG0582 XerC, Integrase DNA replication, recombination, and repair 148652613 Common - cytochrome C biogenesis protein PsycPRwf_0804 91 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 148654169 Common - GrpE protein PsycPRwf_2372 227 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 148653125 Common - LrgA family protein PsycPRwf_1323 19 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 148653165 Common - hypothetical protein PsycPRwf_1363 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653510 Common - inner-membrane translocator PsycPRwf_1713 70 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 148651972 Common nusA transcription elongation factor NusA PsycPRwf_0156 217 COG0195 NusA, Transcription elongation factor Transcription 148653880 Common - Glycine hydroxymethyltransferase PsycPRwf_2083 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 148653254 Common ruvB Holliday junction DNA helicase B PsycPRwf_1452 214 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 148653689 Common ileS isoleucyl-tRNA synthetase PsycPRwf_1892 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148651923 Common - 2OG-Fe(II) oxygenase PsycPRwf_0106 41 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 148653417 Common - heavy metal translocating P-type ATPase PsycPRwf_1619 230 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 148652618 Common - Rhodanese domain protein PsycPRwf_0809 104 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 148653649 Common - hypothetical protein PsycPRwf_1852 23 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 148653228 Common - Phosphoglycerate kinase PsycPRwf_1426 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 148652370 Common rpsB 30S ribosomal protein S2 PsycPRwf_0558 229 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 148653341 Common - AzlC family protein PsycPRwf_1543 99 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 148653230 Common - peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 PsycPRwf_1428 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 148652752 Common - metallophosphoesterase PsycPRwf_0945 33 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 148652259 Common rpsM 30S ribosomal protein S13 PsycPRwf_0447 241 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 148652425 Common - putative cold-shock DNA-binding domain protein PsycPRwf_0613 182 COG1278 CspC, Cold shock proteins Transcription 148653699 Common - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase PsycPRwf_1902 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 148652332 Nonpathogen - hypothetical protein PsycPRwf_0520 1 None None None 148653914 Common - 3-demethylubiquinone-9 3-methyltransferase PsycPRwf_2117 159 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 148652409 Common - amino acid carrier protein PsycPRwf_0597 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 148652985 Common - NAD(P)H dehydrogenase (quinone) PsycPRwf_1179 45 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 148652382 Common - beta-lactamase domain protein PsycPRwf_0570 200 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 148654037 Common - Oligopeptidase A PsycPRwf_2240 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 148653793 Common - hypothetical protein PsycPRwf_1996 16 None None None 148654073 Common - Domain of unknown function DUF1852 PsycPRwf_2276 24 None None None 148652552 Common - thiamine pyrophosphate enzyme TPP binding domain protein PsycPRwf_0743 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 148653654 Common - fructose-1,6-bisphosphatase PsycPRwf_1857 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 148652388 Common - DNA-directed RNA polymerase, omega subunit PsycPRwf_0576 118 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 148652422 Common - acetolactate synthase, small subunit PsycPRwf_0610 191 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 148652281 Common - short chain dehydrogenase PsycPRwf_0469 230 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 148653655 Common - tRNA/rRNA methyltransferase (SpoU) PsycPRwf_1858 187 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 148653640 Common - Peptidase M16C associated domain protein PsycPRwf_1843 53 COG1026 COG1026, Predicted Zn-dependent peptidases, insulinase-like General function prediction only 148653998 Common - membrane protein-like protein PsycPRwf_2201 59 COG2323 COG2323, Predicted membrane protein Function unknown 148653076 Common - phage integrase family protein PsycPRwf_1272 78 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 148653122 Nonpathogen - hypothetical protein PsycPRwf_1320 1 None None None 148652524 Common - heavy metal translocating P-type ATPase PsycPRwf_0713 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 148652324 Common - N-acetyl-anhydromuranmyl-L-alanine amidase PsycPRwf_0512 108 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 148652949 Nonpathogen - hypothetical protein PsycPRwf_1143 1 None None None 148651994 Common - transposase, IS605 OrfB family PsycPRwf_0178 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654086 Nonpathogen - hypothetical protein PsycPRwf_2289 1 None None None 148652040 Common - molybdenum ABC transporter, periplasmic molybdate-binding protein PsycPRwf_0224 85 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 148652835 Common - Integrase, catalytic region PsycPRwf_1028 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653547 Common - PP-loop domain protein PsycPRwf_1750 161 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 148654124 Common - outer membrane autotransporter barrel domain PsycPRwf_2327 50 COG3240 COG3240, Phospholipase/lecithinase/hemolysin Lipid metabolism / General function prediction only 148651941 Common - Type II site-specific deoxyribonuclease PsycPRwf_0124 5 None None None 148654091 Common - hypothetical protein PsycPRwf_2294 4 None None None 148653580 Common - peptidase M16 domain protein PsycPRwf_1783 172 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 148653118 Common - hypothetical protein PsycPRwf_1316 15 None None None 148651911 Common - transposase, IS4 family protein PsycPRwf_0094 8 None None None 148652592 Common - ABC-1 domain protein PsycPRwf_0783 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 148653040 Common - hypothetical protein PsycPRwf_1236 5 None None None 148652378 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PsycPRwf_0566 186 COG0388 COG0388, Predicted amidohydrolase General function prediction only 148652224 Common - Inositol-phosphate phosphatase PsycPRwf_0412 207 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 148653889 Common - histidine kinase PsycPRwf_2092 217 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 148653013 Common - hypothetical protein PsycPRwf_1207 13 None None None 148652349 Common - protein of unknown function DUF339 PsycPRwf_0537 24 COG2938 COG2938, Uncharacterized conserved protein Function unknown 148653155 Common - 5-methylcytosine-specific restriction enzyme subunit McrC PsycPRwf_1353 13 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 148653263 Common - sodium:dicarboxylate symporter PsycPRwf_1461 160 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 148651843 Common - hypothetical protein PsycPRwf_0026 3 None None None 148653893 Common - metal dependent phosphohydrolase PsycPRwf_2096 42 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 148654108 Nonpathogen - 17 kDa surface antigen PsycPRwf_2311 1 None None None 148652355 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PsycPRwf_0543 199 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 148654104 Common - hypothetical protein PsycPRwf_2307 18 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 148652860 Common - Integrase, catalytic region PsycPRwf_1053 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654178 Common - putative polyhydroxyalkanoic acid system protein PsycPRwf_2381 8 None None None 148652252 Common rpsH 30S ribosomal protein S8 PsycPRwf_0440 219 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 148652094 Common - Electron-transferring-flavoprotein dehydrogenase PsycPRwf_0282 115 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 148654057 Nonpathogen - hypothetical protein PsycPRwf_2260 1 None None None 148652696 Common - efflux transporter, RND family, MFP subunit PsycPRwf_0889 139 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 148651826 Common - Auxin Efflux Carrier PsycPRwf_0009 64 COG0679 COG0679, Predicted permeases General function prediction only 148651890 Common - protein of unknown function DUF214 PsycPRwf_0073 90 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 148652214 Common - hypothetical protein PsycPRwf_0402 2 None None None 148653404 Common - protein of unknown function DUF490 PsycPRwf_1606 69 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 148652044 Common - hypothetical protein PsycPRwf_0228 19 None None None 148653773 Common - 5-formyltetrahydrofolate cyclo-ligase PsycPRwf_1976 130 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 148652135 Common - DegV family protein PsycPRwf_0323 37 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 148652665 Common - protein of unknown function DUF395, YeeE/YedE PsycPRwf_0856 65 COG2391 COG2391, Predicted transporter component General function prediction only 148653928 Common - 3-methyl-2-oxobutanoate hydroxymethyltransferase PsycPRwf_2131 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 148653074 Common - BLUF domain protein PsycPRwf_1270 12 None None None 148653301 Common - cyclic peptide transporter PsycPRwf_1501 249 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 148652086 Common - Phosphomannomutase PsycPRwf_0274 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 148652401 Common rpmB 50S ribosomal protein L28 PsycPRwf_0589 165 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 148652482 Common - PpiC-type peptidyl-prolyl cis-trans isomerase PsycPRwf_0671 147 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 148653137 Common - hypothetical protein PsycPRwf_1335 2 None None None 148653831 Nonpathogen - hypothetical protein PsycPRwf_2034 1 None None None 148653061 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PsycPRwf_1257 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 148653593 Common - surface antigen (D15) PsycPRwf_1796 163 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 148654067 Common - phosphate ABC transporter, periplasmic phosphate-binding protein PsycPRwf_2270 123 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 148653987 Nonpathogen - hypothetical protein PsycPRwf_2190 1 None None None 148652767 Common - adenylosuccinate lyase PsycPRwf_0960 235 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 148652207 Common - penicillin-binding protein, 1A family PsycPRwf_0395 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 148652391 Common - hypothetical protein PsycPRwf_0579 17 None None None 148652559 Common - TrkA-N domain protein PsycPRwf_0750 99 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 148653460 Common - Septum formation initiator PsycPRwf_1663 64 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 148653820 Common - hypothetical protein PsycPRwf_2023 3 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 148653369 Common - protein of unknown function DUF152 PsycPRwf_1571 155 COG1496 COG1496, Uncharacterized conserved protein Function unknown 148652794 Common - glycosyl transferase, family 25 PsycPRwf_0987 20 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 148653313 Common - MotA/TolQ/ExbB proton channel PsycPRwf_1513 149 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 148652714 Common ksgA dimethyladenosine transferase PsycPRwf_0907 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 148653503 Common - 3-oxoacid CoA-transferase, A subunit PsycPRwf_1706 98 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 148652978 Common - putative polyhydroxyalkanoic acid system protein PsycPRwf_1172 8 None None None 148653039 Common - protein of unknown function DUF1427 PsycPRwf_1234 12 COG4317 COG4317, Uncharacterized protein conserved in bacteria Function unknown 148652773 Common - two component transcriptional regulator, winged helix family PsycPRwf_0966 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148652909 Common - ABC transporter related PsycPRwf_1102 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 148652587 Common - threonine dehydratase PsycPRwf_0778 203 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 148654114 Common rplT 50S ribosomal protein L20 PsycPRwf_2317 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 148651868 Common - sodium:dicarboxylate symporter PsycPRwf_0051 148 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 148652313 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase PsycPRwf_0501 215 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 148652575 Common - UBA/THIF-type NAD/FAD binding protein PsycPRwf_0766 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 148653104 Nonpathogen - hypothetical protein PsycPRwf_1302 1 None None None 148654181 Common - riboflavin synthase subunit alpha PsycPRwf_2384 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 148653534 Common - signal peptide peptidase SppA, 36K type PsycPRwf_1737 188 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 148653030 Nonpathogen - hypothetical protein PsycPRwf_1225 1 None None None 148654019 Common - acetyl-CoA carboxylase, biotin carboxyl carrier protein PsycPRwf_2222 183 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 148652759 Common - histidine triad (HIT) protein PsycPRwf_0952 233 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 148653423 Common - PpiC-type peptidyl-prolyl cis-trans isomerase PsycPRwf_1625 165 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 148651960 Common - Holliday junction resolvase YqgF PsycPRwf_0143 175 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 148653774 Nonpathogen - hypothetical protein PsycPRwf_1977 1 None None None 148653435 Common - ribonuclease activity regulator protein RraA PsycPRwf_1638 97 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 148652658 Common - formiminoglutamase PsycPRwf_0849 69 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 148652821 Common - Ion transport protein PsycPRwf_1014 106 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 148653360 Common - beta-lactamase domain protein PsycPRwf_1562 36 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 148654147 Common - MOSC domain containing protein PsycPRwf_2350 76 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 148654010 Common - nicotinamide-nucleotide adenylyltransferase PsycPRwf_2213 29 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 148652142 Common - glutamate-1-semialdehyde-2,1-aminomutase PsycPRwf_0330 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 148652651 Common - hypothetical protein PsycPRwf_0842 6 None None None 148653442 Common - glutamine synthetase, type I PsycPRwf_1645 227 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 148653382 Nonpathogen - hypothetical protein PsycPRwf_1584 1 None None None 148653670 Common - malate dehydrogenase PsycPRwf_1873 143 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 148652817 Common - protein of unknown function DUF182 PsycPRwf_1010 97 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 148652762 Common - GTP cyclohydrolase I PsycPRwf_0955 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 148652112 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_0300 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148654012 Common - peptidase M48, Ste24p PsycPRwf_2215 194 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 148653828 Common - GTPase subunit of restriction endonuclease-like protein PsycPRwf_2031 39 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 148652454 Common - succinyl-diaminopimelate desuccinylase PsycPRwf_0642 209 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 148653776 Common - ATP-dependent protease La PsycPRwf_1979 212 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 148652149 Common - pyrroline-5-carboxylate reductase PsycPRwf_0337 213 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 148653474 Nonpathogen - hypothetical protein PsycPRwf_1677 1 None None None 148654143 Common - membrane protein putative toxin regulator-like protein PsycPRwf_2346 15 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 148653130 Common - N-6 DNA methylase PsycPRwf_1328 156 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 148652202 Common - hypothetical protein PsycPRwf_0390 8 None None None 148651877 Common hisB imidazoleglycerol-phosphate dehydratase PsycPRwf_0060 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 148652717 Common - Site-specific recombinase-like protein PsycPRwf_0910 23 COG4389 COG4389, Site-specific recombinase DNA replication, recombination, and repair 148652702 Common - hypothetical protein PsycPRwf_0895 11 None None None 148653037 Common - DNA polymerase III, alpha subunit PsycPRwf_1232 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 148652496 Common - hypothetical protein PsycPRwf_0685 6 None None None 148652297 Common - protein of unknown function UPF0047 PsycPRwf_0485 125 COG0432 COG0432, Uncharacterized conserved protein Function unknown 148653805 Common - hypothetical protein PsycPRwf_2008 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 148652738 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase PsycPRwf_0931 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 148653325 Common - Nickel-transporting ATPase PsycPRwf_1527 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 148652870 Common potC spermidine/putrescine ABC transporter membrane protein PsycPRwf_1063 155 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 148652739 Common - putative phosphohistidine phosphatase, SixA PsycPRwf_0932 44 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 148652198 Common cysM cysteine synthase B PsycPRwf_0386 227 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 148652459 Common - OsmC family protein PsycPRwf_0647 14 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 148653308 Common - periplasmic binding protein PsycPRwf_1508 144 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 148653357 Common - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) PsycPRwf_1559 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 148651857 Nonpathogen - hypothetical protein PsycPRwf_0040 1 None None None 148652068 Common - 3,4-dihydroxy-2-butanone 4-phosphate synthase PsycPRwf_0256 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 148652054 Common - glycosyl transferase, group 1 PsycPRwf_0242 19 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 148653872 Common - extracellular solute-binding protein, family 3 PsycPRwf_2075 177 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 148653380 Common - Lytic transglycosylase, catalytic PsycPRwf_1582 107 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 148653721 Common - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase PsycPRwf_1924 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 148653411 Common - carbon storage regulator, CsrA PsycPRwf_1613 82 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 148652050 Common - transposase IS3/IS911 family protein PsycPRwf_0235 74 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652238 Common rplC 50S ribosomal protein L3 PsycPRwf_0426 236 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 148652846 Common - transcriptional regulator, LysR family PsycPRwf_1039 191 COG0583 LysR, Transcriptional regulator Transcription 148653696 Common - Pyrrolo-quinoline quinone PsycPRwf_1899 106 COG1520 COG1520, FOG: WD40-like repeat Function unknown 148654070 Common - fructose-1,6-bisphosphate aldolase PsycPRwf_2273 33 COG3588 COG3588, Fructose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 148653854 Common - Ferrochelatase PsycPRwf_2057 165 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 148652169 Common - SirA family protein PsycPRwf_0357 46 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 148651929 Common - ATP-dependent helicase HepA PsycPRwf_0112 110 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 148652273 Common - carbohydrate kinase, YjeF related protein PsycPRwf_0461 191 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 148651850 Common - hypothetical protein PsycPRwf_0033 20 COG0824 FcbC, Predicted thioesterase General function prediction only 148653092 Common - hypothetical protein PsycPRwf_1289 2 None None None 148653244 Common - Lysine exporter protein (LYSE/YGGA) PsycPRwf_1442 118 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 148654044 Common - CBS domain containing protein PsycPRwf_2247 219 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 148652418 Common - ABC transporter related PsycPRwf_0606 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 148652164 Common - RNA polymerase, sigma 54 subunit, RpoN PsycPRwf_0352 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 148652340 Common - cell division protein FtsA PsycPRwf_0528 176 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 148652157 Common - phosphate acetyltransferase PsycPRwf_0345 167 COG0280 Pta, Phosphotransacetylase Energy production and conversion 148652144 Common - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit PsycPRwf_0332 182 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 148653836 Common rplA 50S ribosomal protein L1 PsycPRwf_2039 237 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 148654023 Common - hypothetical protein PsycPRwf_2226 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 148653048 Common - serine O-acetyltransferase PsycPRwf_1244 203 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 148652126 Common - beta-hexosaminidase PsycPRwf_0314 173 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 148653523 Common - Protein of unknown function DUF676, hydrolase domain protein PsycPRwf_1726 33 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 148652879 Nonpathogen - hypothetical protein PsycPRwf_1072 1 None None None 148652545 Common - regulatory protein, IclR PsycPRwf_0735 74 COG1414 IclR, Transcriptional regulator Transcription 148652246 Common - 50S ribosomal protein L29 PsycPRwf_0434 87 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 148653637 Common - Acyltransferase, WS/DGAT/MGAT PsycPRwf_1840 27 None None None 148651828 Nonpathogen - hypothetical protein PsycPRwf_0011 1 None None None 148653733 Common - isopropylmalate isomerase large subunit PsycPRwf_1936 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 148654176 Common - threonine synthase PsycPRwf_2379 154 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 148652264 Common - Sua5/YciO/YrdC/YwlC family protein PsycPRwf_0452 177 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 148652072 Common - citrate synthase I PsycPRwf_0260 194 COG0372 GltA, Citrate synthase Energy production and conversion 148652508 Common - ferric reductase-like protein PsycPRwf_0697 11 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 148652021 Common - excinuclease ABC, C subunit PsycPRwf_0205 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 148652400 Common rpmG 50S ribosomal protein L33 PsycPRwf_0588 133 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 148652319 Common rpmE2 50S ribosomal protein L31 type B PsycPRwf_0507 121 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 148652746 Common - MATE efflux family protein PsycPRwf_0939 108 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 148652363 Common - membrane protein-like protein PsycPRwf_0551 63 COG2323 COG2323, Predicted membrane protein Function unknown 148653855 Common metX homoserine O-acetyltransferase PsycPRwf_2058 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 148654084 Common - Na+/Pi-cotransporter PsycPRwf_2287 51 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 148651990 Common - UspA domain protein PsycPRwf_0174 32 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 148653564 Common - hypothetical protein PsycPRwf_1767 2 None None None 148653451 Common - glycerol kinase PsycPRwf_1654 180 COG0554 GlpK, Glycerol kinase Energy production and conversion 148652849 Common - transcriptional coactivator/pterin dehydratase PsycPRwf_1042 90 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 148653186 Common - hypothetical protein PsycPRwf_1384 15 None None None 148652677 Common - ABC-type Fe3+ transport system periplasmic component-like protein PsycPRwf_0868 97 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 148653719 Common - Propeptide, PepSY amd peptidase M4 PsycPRwf_1922 15 COG3212 COG3212, Predicted membrane protein Function unknown 148653753 Common - alpha/beta hydrolase fold PsycPRwf_1956 9 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653963 Common - heme exporter protein CcmC PsycPRwf_2166 146 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 148653071 Common - Stearoyl-CoA 9-desaturase PsycPRwf_1267 67 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 148653615 Common - pili assembly chaperone PsycPRwf_1818 25 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 148652152 Common - Hemerythrin HHE cation binding domain protein PsycPRwf_0340 17 None None None 148653149 Common - hypothetical protein PsycPRwf_1347 7 None None None 148651897 Common - stress protein PsycPRwf_0080 25 COG4110 COG4110, Uncharacterized protein involved in stress response General function prediction only 148653576 Nonpathogen - hypothetical protein PsycPRwf_1779 1 None None None 148653398 Common - gamma-glutamyl kinase PsycPRwf_1600 192 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 148652704 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase PsycPRwf_0897 137 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 148653783 Common - intracellular septation protein A PsycPRwf_1986 91 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 148652395 Common - S-formylglutathione hydrolase PsycPRwf_0583 87 COG0627 COG0627, Predicted esterase General function prediction only 148652059 Common - oxidoreductase domain protein PsycPRwf_0247 89 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 148653053 Common - histidinol-phosphate aminotransferase PsycPRwf_1249 237 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 148652446 Common - NAD(P)(+) transhydrogenase (AB-specific) PsycPRwf_0634 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 148652960 Common - Anthranilate synthase PsycPRwf_1154 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 148652076 Common sdhB succinate dehydrogenase iron-sulfur subunit PsycPRwf_0264 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 148651984 Common - A/G-specific adenine glycosylase PsycPRwf_0168 206 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 148651992 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase PsycPRwf_0176 206 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 148652969 Common - dethiobiotin synthase PsycPRwf_1163 156 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 148653288 Nonpathogen - hypothetical protein PsycPRwf_1487 4 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 148652211 Common - type IV pilus secretin PilQ PsycPRwf_0399 138 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 148653860 Common - pyruvate carboxyltransferase PsycPRwf_2063 183 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 148652536 Common - phage integrase family protein PsycPRwf_0726 90 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 148652108 Common - Transcriptional regulator IclR-like protein PsycPRwf_0296 111 COG1414 IclR, Transcriptional regulator Transcription 148653662 Common - aldo/keto reductase PsycPRwf_1865 193 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 148651837 Common - extracellular solute-binding protein, family 5 PsycPRwf_0020 207 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 148652092 Common - membrane protein-like protein PsycPRwf_0280 52 COG4327 COG4327, Predicted membrane protein Function unknown 148654122 Common - membrane protein-like protein PsycPRwf_2325 39 COG3686 COG3686, Predicted membrane protein Function unknown 148654062 Common - hypothetical protein PsycPRwf_2265 69 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 148651981 Common - glycerol-3-phosphate acyltransferase PsycPRwf_0165 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 148653251 Common - adenylate cyclase PsycPRwf_1449 66 COG3025 COG3025, Uncharacterized conserved protein Function unknown 148653307 Common - Haemin-degrading family protein PsycPRwf_1507 39 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 148652966 Common - dethiobiotin synthase PsycPRwf_1160 118 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 148652103 Common - putative methyltransferase PsycPRwf_0291 45 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 148652474 Common - major facilitator superfamily MFS_1 PsycPRwf_0662 130 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 148651954 Common - phospho-N-acetylmuramoyl-pentapeptide-transferase PsycPRwf_0137 225 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 148653817 Common - hypothetical protein PsycPRwf_2020 2 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 148653813 Common - preprotein translocase subunit SecA PsycPRwf_2016 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 148653623 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase PsycPRwf_1826 176 COG0756 Dut, dUTPase Nucleotide transport and metabolism 148652988 Common - hypothetical protein PsycPRwf_1182 3 None None None 148652922 Common - type I site-specific deoxyribonuclease, HsdR family PsycPRwf_1115 135 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 148652622 Common - Peptidylprolyl isomerase PsycPRwf_0813 201 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 148653900 Common - outer membrane lipoprotein LolB PsycPRwf_2103 28 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 148653569 Common - modification methylase, HemK family PsycPRwf_1772 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 148653485 Common - NADH dehydrogenase subunit M PsycPRwf_1688 209 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 148654156 Common - Mg chelatase, subunit ChlI PsycPRwf_2359 198 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 148653710 Common - transcriptional regulator, TetR family PsycPRwf_1913 22 COG1309 AcrR, Transcriptional regulator Transcription 148652208 Common - Tfp pilus assembly protein ATPase PilM-like protein PsycPRwf_0396 63 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 148652003 Common - F0F1 ATP synthase subunit A PsycPRwf_0187 205 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 148652648 Common - DoxX family protein PsycPRwf_0839 27 COG2259 COG2259, Predicted membrane protein Function unknown 148652757 Common - hypothetical protein PsycPRwf_0950 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 148651838 Common - extracellular solute-binding protein, family 5 PsycPRwf_0021 195 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 148653193 Common - DNA-directed DNA polymerase PsycPRwf_1391 188 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 148652814 Common - (2Fe-2S)-binding domain protein PsycPRwf_1007 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 148652830 Common - Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein PsycPRwf_1023 36 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148652191 Common - OmpA/MotB domain protein PsycPRwf_0379 160 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148653955 Common - response regulator receiver protein PsycPRwf_2158 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148652288 Nonpathogen - hypothetical protein PsycPRwf_0476 1 None None None 148654168 Common - chaperone protein DnaK PsycPRwf_2371 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 148652419 Common - ABC-2 type transporter PsycPRwf_0607 165 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 148653794 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PsycPRwf_1997 127 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 148653314 Common - TonB family protein PsycPRwf_1514 4 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 148653113 Common - hypothetical protein PsycPRwf_1311 2 None None None 148653171 Common xseA exodeoxyribonuclease VII large subunit PsycPRwf_1369 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 148653457 Common - dihydroorotase PsycPRwf_1660 88 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 148651999 Common - ABC transporter related PsycPRwf_0183 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 148652183 Nonpathogen - hypothetical protein PsycPRwf_0371 1 None None None 148652543 Common - hypothetical protein PsycPRwf_0733 52 COG0730 COG0730, Predicted permeases General function prediction only 148653908 Common - AMP-dependent synthetase and ligase PsycPRwf_2111 213 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148653241 Common - protein of unknown function UPF0118 PsycPRwf_1439 193 COG0628 PerM, Predicted permease General function prediction only 148652775 Common - alpha/beta hydrolase fold PsycPRwf_0968 21 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 148652601 Common - ClpXP protease specificity-enhancing factor PsycPRwf_0792 64 COG2969 SspB, Stringent starvation protein B General function prediction only 148652804 Common - FAD-binding 9, siderophore-interacting domain protein PsycPRwf_0997 62 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 148653765 Common - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family PsycPRwf_1968 122 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 148654129 Common - Dihydrofolate reductase PsycPRwf_2332 143 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 148651863 Common - glutamate--cysteine ligase PsycPRwf_0046 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 148654175 Common - Cytochrome-c peroxidase PsycPRwf_2378 93 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 148652589 Common - alpha/beta hydrolase fold PsycPRwf_0780 139 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653586 Common - glycosyl transferase, group 1 PsycPRwf_1789 39 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 148654096 Common - NADPH-dependent FMN reductase PsycPRwf_2299 115 COG0431 COG0431, Predicted flavoprotein General function prediction only 148652883 Common - Zn-dependent hydrolase of the beta-lactamase fold-like protein PsycPRwf_1076 90 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 148652025 Common - hypothetical protein PsycPRwf_0209 2 None None None 148652472 Common - transport system permease protein PsycPRwf_0660 191 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 148653064 Common - phosphoglucosamine mutase PsycPRwf_1260 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 148653952 Common - CheA signal transduction histidine kinase PsycPRwf_2155 224 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 148652414 Nonpathogen - hypothetical protein PsycPRwf_0602 1 None None None 148652646 Common - HAD-superfamily subfamily IB hydrolase, TIGR01490 PsycPRwf_0837 78 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 148652223 Common - 1-deoxy-D-xylulose-5-phosphate synthase PsycPRwf_0411 205 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 148652792 Common - hypothetical protein PsycPRwf_0985 2 None None None 148653405 Common - surface antigen (D15) PsycPRwf_1607 117 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 148653676 Nonpathogen - hypothetical protein PsycPRwf_1879 1 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 148652680 Common - ABC transporter related PsycPRwf_0871 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 148652799 Common - predicted inner membrane peptidase PsycPRwf_0992 186 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 148654149 Nonpathogen - hypothetical protein PsycPRwf_2352 1 None None None 148653312 Common - Biopolymer transport protein ExbD/TolR PsycPRwf_1512 136 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 148653634 Common - hypothetical protein PsycPRwf_1837 17 None None None 148653977 Common - protein of unknown function DUF74 PsycPRwf_2180 104 COG0393 COG0393, Uncharacterized conserved protein Function unknown 148652591 Common - alanine racemase PsycPRwf_0782 199 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 148652018 Common - tRNA (guanine-N1)-methyltransferase PsycPRwf_0202 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 148653747 Common - ABC transporter related PsycPRwf_1950 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 148653886 Common - pseudouridine synthase PsycPRwf_2089 202 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 148652654 Common - Phosphoglycerate mutase PsycPRwf_0845 42 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 148652905 Common - NAD-glutamate dehydrogenase PsycPRwf_1098 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 148652102 Common - putative methyltransferase PsycPRwf_0290 49 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 148654103 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_2306 234 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 148653213 Common - Hydroxyacylglutathione hydrolase PsycPRwf_1411 193 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 148652480 Common - respiratory nitrate reductase, gamma subunit PsycPRwf_0669 56 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 148652507 Common - ApbE family lipoprotein PsycPRwf_0696 99 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 148652635 Common - ABC transporter related PsycPRwf_0826 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 148653985 Common - conserved hypothetical protein 701 PsycPRwf_2188 95 COG1981 COG1981, Predicted membrane protein Function unknown 148653970 Common - ornithine cyclodeaminase/mu-crystallin PsycPRwf_2173 95 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 148653376 Common nrdB ribonucleotide-diphosphate reductase subunit beta PsycPRwf_1578 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 148653002 Common - transcriptional regulator, LysR family PsycPRwf_1196 187 COG0583 LysR, Transcriptional regulator Transcription 148652571 Common - aldehyde dehydrogenase PsycPRwf_0762 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148651885 Common - alpha/beta hydrolase fold PsycPRwf_0068 161 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653020 Common - pseudouridine synthase PsycPRwf_1214 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 148652047 Common - glycosyl transferase, group 1 PsycPRwf_0231 126 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 148653865 Common - acyl-CoA synthetase PsycPRwf_2068 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148652867 Common - glutathione S-transferase-like protein PsycPRwf_1060 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148653252 Common - ErfK/YbiS/YcfS/YnhG family protein PsycPRwf_1450 28 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 148651940 Nonpathogen - hypothetical protein PsycPRwf_0123 1 None None None 148652088 Common mazG nucleoside triphosphate pyrophosphohydrolase PsycPRwf_0276 154 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 148652661 Common - urocanate hydratase PsycPRwf_0852 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 148652239 Common rplD 50S ribosomal protein L4 PsycPRwf_0427 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 148653265 Common - porin, Gram-negative type PsycPRwf_1463 10 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 148653163 Common - hypothetical protein PsycPRwf_1361 125 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 148652547 Common - Cupin 2, conserved barrel domain protein PsycPRwf_0738 31 COG3435 COG3435, Gentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 148652032 Common - molybdenum cofactor synthesis domain PsycPRwf_0216 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 148653063 Common - pyridoxamine 5'-phosphate oxidase PsycPRwf_1259 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 148653465 Common - 2-dehydro-3-deoxyphosphooctonate aldolase PsycPRwf_1668 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 148653720 Common - DNA-directed DNA polymerase PsycPRwf_1923 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 148653204 Common - Ion transport protein PsycPRwf_1402 100 None None None 148653912 Common - BFD domain protein (2Fe-2S)-binding domain protein PsycPRwf_2115 10 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 148652230 Common - glutamyl-tRNA(Gln) amidotransferase, A subunit PsycPRwf_0418 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 148651849 Common - Uncharacterized iron-regulated membrane protein-like protein PsycPRwf_0032 43 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 148653570 Common - major facilitator superfamily MFS_1 PsycPRwf_1773 110 None None None 148653046 Common - transcriptional regulator, LysR family PsycPRwf_1242 180 COG0583 LysR, Transcriptional regulator Transcription 148652578 Common - putative cold-shock DNA-binding domain protein PsycPRwf_0769 181 COG1278 CspC, Cold shock proteins Transcription 148653172 Common - hypothetical protein PsycPRwf_1370 5 None None None 148652407 Common metH B12-dependent methionine synthase PsycPRwf_0595 176 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 148652180 Common - protein of unknown function DUF81 PsycPRwf_0368 119 COG0730 COG0730, Predicted permeases General function prediction only 148652428 Common - GCN5-related N-acetyltransferase PsycPRwf_0616 153 COG0456 RimI, Acetyltransferases General function prediction only 148653656 Common - Procollagen-proline dioxygenase PsycPRwf_1859 19 None None None 148652890 Common - amino acid aldolase or racemase-like protein PsycPRwf_1083 20 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 148652187 Common era GTP-binding protein Era PsycPRwf_0375 222 COG1159 Era, GTPase General function prediction only 148653505 Common - short chain fatty acid transporter PsycPRwf_1708 42 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 148652462 Common - potassium/proton antiporter PsycPRwf_0650 153 COG3263 COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain Inorganic ion transport and metabolism 148653432 Common - ferredoxin, 2Fe-2S type, ISC system PsycPRwf_1634 88 COG0633 Fdx, Ferredoxin Energy production and conversion 148652316 Common - histidinol-phosphate aminotransferase PsycPRwf_0504 237 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 148652997 Common - protein of unknown function DUF779 PsycPRwf_1191 42 COG3564 COG3564, Uncharacterized protein conserved in bacteria Function unknown 148652567 Common - FolC bifunctional protein PsycPRwf_0758 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 148654136 Common - TonB-dependent receptor PsycPRwf_2339 52 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 148652111 Common - enoyl-CoA hydratase PsycPRwf_0299 184 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148653941 Common - protein of unknown function DUF1111 PsycPRwf_2144 48 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 148652384 Common - cation diffusion facilitator family transporter PsycPRwf_0572 190 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 148653629 Common - DNA polymerase III, delta subunit PsycPRwf_1832 63 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 148651904 Common - lipolytic enzyme, G-D-S-L family PsycPRwf_0087 109 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 148652781 Common - DsrC family protein PsycPRwf_0974 53 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 148652605 Common - ubiquinol-cytochrome c reductase, iron-sulfur subunit PsycPRwf_0796 92 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 148653290 Common - secreted repeat protein PsycPRwf_1489 36 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 148652245 Common rplP 50S ribosomal protein L16 PsycPRwf_0433 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 148652000 Common - putative ferric uptake regulator, Fur family PsycPRwf_0184 98 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 148653168 Common - transposase IS66 PsycPRwf_1366 63 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652580 Common - hypothetical protein PsycPRwf_0771 68 COG2836 COG2836, Uncharacterized conserved protein Function unknown 148652362 Common - hypothetical protein PsycPRwf_0550 29 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 148652972 Common - transposase IS3/IS911 family protein PsycPRwf_1166 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652326 Common - PGAP1 family protein PsycPRwf_0514 17 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 148653128 Common - hypothetical protein PsycPRwf_1326 4 None None None 148652091 Common - Na+/solute symporter PsycPRwf_0279 136 COG4147 DhlC, Predicted symporter General function prediction only 148652805 Common - alpha/beta hydrolase fold PsycPRwf_0998 18 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653993 Common - ErfK/YbiS/YcfS/YnhG family protein PsycPRwf_2196 81 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 148653425 Nonpathogen - hypothetical protein PsycPRwf_1627 1 None None None 148653294 Common - Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein PsycPRwf_1494 69 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 148652372 Nonpathogen - hypothetical protein PsycPRwf_0560 1 None None None 148653100 Common - hypothetical protein PsycPRwf_1297 2 None None None 148652925 Common - hypothetical protein PsycPRwf_1118 54 None None None 148652569 Common - ABC transporter related PsycPRwf_0760 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 148654017 Common - GCN5-related N-acetyltransferase PsycPRwf_2220 85 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 148653511 Common - ABC transporter related PsycPRwf_1714 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 148652724 Nonpathogen - 4'-phosphopantetheinyl transferase PsycPRwf_0917 1 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 148653493 Common - NADH dehydrogenase subunit E PsycPRwf_1696 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 148653121 Nonpathogen - hypothetical protein PsycPRwf_1319 1 None None None 148653825 Common - cytochrome c biogenesis protein, transmembrane region PsycPRwf_2028 113 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 148654075 Common - flavin reductase domain protein, FMN-binding PsycPRwf_2278 111 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 148652500 Common - Serine protease inhibitor-like protein PsycPRwf_0689 22 COG4826 COG4826, Serine protease inhibitor Posttranslational modification, protein turnover, chaperones 148652888 Common - AMP-dependent synthetase and ligase PsycPRwf_1081 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148653857 Common - Sel1 domain protein repeat-containing protein PsycPRwf_2060 99 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 148653596 Common - phosphatidate cytidylyltransferase PsycPRwf_1799 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 148653672 Common - tRNA-i(6)A37 thiotransferase enzyme MiaB PsycPRwf_1875 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 148652721 Common - 5,10-methylenetetrahydrofolate reductase PsycPRwf_0914 140 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 148653512 Common - Saccharopine dehydrogenase PsycPRwf_1715 50 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 148652444 Nonpathogen - hypothetical protein PsycPRwf_0632 1 None None None 148652353 Common - putative undecaprenol kinase PsycPRwf_0541 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 148652432 Common - cell divisionFtsK/SpoIIIE PsycPRwf_0620 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 148652945 Common - arsenical pump membrane protein PsycPRwf_1139 107 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 148651875 Common - hypothetical protein PsycPRwf_0058 11 None None None 148652897 Common - transposase IS3/IS911 family protein PsycPRwf_1090 9 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652339 Common - cell division protein FtsQ PsycPRwf_0527 56 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 148654121 Common - dihydrouridine synthase, DuS PsycPRwf_2324 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 148654055 Common - G:T/U mismatch-specific DNA glycosylase-like protein PsycPRwf_2258 14 COG3663 Mug, G:T/U mismatch-specific DNA glycosylase DNA replication, recombination, and repair 148653937 Common - transcriptional regulator, LysR family PsycPRwf_2140 190 COG0583 LysR, Transcriptional regulator Transcription 148653718 Common - NUDIX hydrolase PsycPRwf_1921 124 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 148652292 Common - pseudouridine synthase, RluA family PsycPRwf_0480 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 148652611 Common - cytochrome c-type biogenesis protein CcmF PsycPRwf_0802 147 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 148653942 Common - Uncharacterized iron-regulated protein-like protein PsycPRwf_2145 31 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 148652306 Common - protein of unknown function DUF81 PsycPRwf_0494 9 None None None 148651922 Common - Alcohol dehydrogenase GroES domain protein PsycPRwf_0105 172 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 148652750 Common - hypothetical protein PsycPRwf_0943 2 None None None 148653660 Common rpsL 30S ribosomal protein S12 PsycPRwf_1863 234 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 148652452 Common - hypothetical protein PsycPRwf_0640 7 COG0824 FcbC, Predicted thioesterase General function prediction only 148653647 Common - Glutathione S-transferase, C-terminal domain PsycPRwf_1850 76 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652789 Common - NAD-dependent epimerase/dehydratase PsycPRwf_0982 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 148652539 Nonpathogen - hypothetical protein PsycPRwf_0729 1 None None None 148652253 Common rplF 50S ribosomal protein L6 PsycPRwf_0441 234 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 148652449 Common - protein of unknown function DUF328 PsycPRwf_0637 81 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 148652554 Common - periplasmic binding protein PsycPRwf_0745 91 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 148652209 Common - Fimbrial assembly family protein PsycPRwf_0397 30 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 148653911 Common - bacterioferritin PsycPRwf_2114 105 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 148652034 Common - molybdenum cofactor biosynthesis protein B PsycPRwf_0218 180 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 148652955 Common - L-serine dehydratase 1 PsycPRwf_1149 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 148652275 Common - NUDIX hydrolase PsycPRwf_0463 98 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 148652703 Common - Radical SAM domain protein PsycPRwf_0896 163 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 148654144 Common - Appr-1-p processing domain protein PsycPRwf_2347 116 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 148653257 Nonpathogen - hypothetical protein PsycPRwf_1455 1 None None None 148652358 Common - hypothetical protein PsycPRwf_0546 3 None None None 148654065 Common - phosphate ABC transporter, inner membrane subunit PstA PsycPRwf_2268 222 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 148652957 Common - polar amino acid ABC transporter, inner membrane subunit PsycPRwf_1151 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 148653268 Common - transcriptional regulator, TetR family PsycPRwf_1467 84 COG1309 AcrR, Transcriptional regulator Transcription 148653475 Common - polyphosphate kinase PsycPRwf_1678 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 148654167 Common - aminotransferase, class I and II PsycPRwf_2370 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 148653761 Common - quinolinate synthetase PsycPRwf_1964 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 148652705 Common - Lysophospholipase-like protein PsycPRwf_0898 74 COG2267 PldB, Lysophospholipase Lipid metabolism 148653362 Common - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase PsycPRwf_1564 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 148651987 Common - hypothetical protein PsycPRwf_0171 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 148653939 Common - uncharacterised conserved protein UCP028101 PsycPRwf_2142 24 COG3490 COG3490, Uncharacterized protein conserved in bacteria Function unknown 148652182 Common - hypothetical protein PsycPRwf_0370 8 None None None 148652659 Common - histidine ammonia-lyase PsycPRwf_0850 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 148653487 Common - NADH-ubiquinone oxidoreductase, chain 4L PsycPRwf_1690 156 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 148652774 Common - Carboxylesterase PsycPRwf_0967 92 COG0400 COG0400, Predicted esterase General function prediction only 148651986 Common - dienelactone hydrolase PsycPRwf_0170 114 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 148653882 Common - protein of unknown function DUF482 PsycPRwf_2085 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 148653704 Common - ferredoxin-dependent glutamate synthase PsycPRwf_1907 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 148653729 Common - translation initiation factor IF-1 PsycPRwf_1932 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 148653520 Common - glycine cleavage system protein H PsycPRwf_1723 184 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 148652028 Common - peptidase M48, Ste24p PsycPRwf_0212 131 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 148652493 Common - extracellular solute-binding protein, family 3 PsycPRwf_0682 159 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 148653447 Common - MscS Mechanosensitive ion channel PsycPRwf_1650 144 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148653459 Common - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PsycPRwf_1662 196 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 148654112 Common - phenylalanyl-tRNA synthetase, beta subunit PsycPRwf_2315 240 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 148653144 Common - hypothetical protein PsycPRwf_1342 54 COG2862 COG2862, Predicted membrane protein Function unknown 148653902 Common - ribose-phosphate pyrophosphokinase PsycPRwf_2105 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 148653351 Common - nitrite reductase (NAD(P)H), small subunit PsycPRwf_1553 48 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 148652620 Common - oligoribonuclease PsycPRwf_0811 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 148652369 Common - methionine aminopeptidase, type I PsycPRwf_0557 248 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 148653626 Common - arsenate reductase and related PsycPRwf_1829 100 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 148653302 Common - Siderophore-interacting protein PsycPRwf_1502 5 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 148652854 Common - two component transcriptional regulator, winged helix family PsycPRwf_1047 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148653471 Nonpathogen - hypothetical protein PsycPRwf_1674 1 None None None 148652464 Common - hypothetical protein PsycPRwf_0652 30 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 148653111 Common - hypothetical protein PsycPRwf_1309 10 None None None 148653389 Common - ATP-dependent Clp protease, ATP-binding subunit clpA PsycPRwf_1591 220 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 148652189 Common - pyridoxal phosphate biosynthetic protein PdxJ PsycPRwf_0377 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 148652255 Common rpsE 30S ribosomal protein S5 PsycPRwf_0443 248 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 148652073 Common - Succinate dehydrogenase, cytochrome b556 subunit PsycPRwf_0261 61 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 148652426 Common - Electron transfer flavoprotein, alpha/beta-subunit-like protein PsycPRwf_0614 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 148653748 Common - lipid A biosynthesis acyltransferase PsycPRwf_1951 104 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 148653181 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_1379 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 148653439 Common rplI 50S ribosomal protein L9 PsycPRwf_1642 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 148652911 Common - iron-hydroxamate transporter permease subunit PsycPRwf_1104 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 148652002 Common - hypothetical protein PsycPRwf_0186 6 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 148652843 Nonpathogen - hypothetical protein PsycPRwf_1036 1 None None None 148652629 Common - tRNA delta(2)-isopentenylpyrophosphate transferase PsycPRwf_0820 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 148652116 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_0304 235 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 148653891 Common - D-tyrosyl-tRNA deacylase PsycPRwf_2094 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 148651832 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein PsycPRwf_0015 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 148652963 Common - Ornithine decarboxylase PsycPRwf_1157 83 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 148653430 Common - co-chaperone Hsc20 PsycPRwf_1632 44 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 148653529 Common - phospholipase D/Transphosphatidylase PsycPRwf_1732 124 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 148651893 Common - protein of unknown function DUF475 PsycPRwf_0076 43 COG2899 COG2899, Uncharacterized protein conserved in bacteria Function unknown 148651937 Nonpathogen - hypothetical protein PsycPRwf_0120 1 None None None 148652301 Common - peptidase M23B PsycPRwf_0489 177 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 148651825 Common - enoyl-CoA hydratase PsycPRwf_0008 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148653225 Common - acetylornithine aminotransferase PsycPRwf_1423 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 148651867 Common - hypothetical protein PsycPRwf_0050 13 None None None 148651855 Nonpathogen - hypothetical protein PsycPRwf_0038 1 None None None 148652968 Nonpathogen - hypothetical protein PsycPRwf_1162 4 None None None 148651913 Common - Na(+)-translocating NADH-quinone reductase subunit E PsycPRwf_0096 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 148652153 Common - N-ethylmaleimide reductase, FMN-linked PsycPRwf_0341 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 148653563 Common - exsB protein PsycPRwf_1766 177 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 148652679 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_0870 163 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 148652986 Common - aldo/keto reductase PsycPRwf_1180 176 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 148653059 Common - alpha/beta hydrolase fold PsycPRwf_1255 99 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148652347 Common - ATP-dependent metalloprotease FtsH PsycPRwf_0535 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 148652104 Common - protein of unknown function DUF1176 PsycPRwf_0292 11 None None None 148653768 Common - protein of unknown function UPF0054 PsycPRwf_1971 95 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 148652540 Common - transposase IS3/IS911 family protein PsycPRwf_0730 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652874 Common - hypothetical protein PsycPRwf_1067 11 None None None 148652844 Common - Glyoxalase/bleomycin resistance protein/dioxygenase PsycPRwf_1037 43 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 148652066 Common - UvrD/REP helicase PsycPRwf_0254 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 148652662 Common - transcriptional regulator, GntR family PsycPRwf_0853 130 COG2188 PhnF, Transcriptional regulators Transcription 148653188 Common - beta-lactamase PsycPRwf_1386 52 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 148651961 Common - protein of unknown function DUF179 PsycPRwf_0144 128 COG1678 COG1678, Putative transcriptional regulator Transcription 148652360 Common - peptidase M48, Ste24p PsycPRwf_0548 125 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 148652530 Common - Resolvase, N-terminal domain PsycPRwf_0719 84 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 148651930 Common - ybaK/ebsC protein PsycPRwf_0113 114 COG2606 EbsC, Uncharacterized conserved protein Function unknown 148652822 Common - ABC-1 domain protein PsycPRwf_1015 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 148652514 Common - prolipoprotein diacylglyceryl transferase PsycPRwf_0703 204 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 148651835 Common - Uncharacterized membrane-anchored protein-like protein PsycPRwf_0018 17 COG4929 COG4929, Uncharacterized membrane-anchored protein Function unknown 148652147 Common - formate dehydrogenase, subunit FdhD PsycPRwf_0335 133 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 148653491 Common - NADH dehydrogenase subunit G PsycPRwf_1694 186 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 148653999 Common - protein of unknown function DUF1328 PsycPRwf_2202 2 None None None 148653990 Common - AMP-dependent synthetase and ligase PsycPRwf_2193 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148654025 Common - biotin/lipoyl attachment domain-containing protein PsycPRwf_2228 74 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 148653664 Common - phospholipid/glycerol acyltransferase PsycPRwf_1867 107 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 148653605 Common - Ribonuclease Z PsycPRwf_1808 97 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 148653396 Common - N-acetyl-gamma-glutamyl-phosphate reductase PsycPRwf_1598 218 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 148653098 Nonpathogen - hypothetical protein PsycPRwf_1295 1 None None None 148652733 Common - Ubiquinone biosynthesis protein COQ7-like protein PsycPRwf_0926 50 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 148654011 Common - nicotinamide mononucleotide transporter PnuC PsycPRwf_2214 16 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 148654046 Nonpathogen - hypothetical protein PsycPRwf_2249 1 COG4719 COG4719, Uncharacterized protein conserved in bacteria Function unknown 148653195 Common - 3-deoxy-manno-octulosonate cytidylyltransferase PsycPRwf_1393 146 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 148652992 Common - acetyl-CoA acetyltransferase PsycPRwf_1186 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 148652165 Common - sigma 54 modulation protein/ribosomal protein S30EA PsycPRwf_0353 112 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 148653790 Common - major facilitator superfamily MFS_1 PsycPRwf_1993 82 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148653274 Common - transposase IS3/IS911 family protein PsycPRwf_1473 53 None None None 148653086 Nonpathogen - hypothetical protein PsycPRwf_1283 1 None None None 148652396 Common - Ribulose-phosphate 3-epimerase PsycPRwf_0584 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 148652071 Nonpathogen - hypothetical protein PsycPRwf_0259 1 None None None 148654085 Common - homoserine kinase PsycPRwf_2288 62 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 148652876 Common - protein of unknown function UPF0187 PsycPRwf_1069 56 COG3781 COG3781, Predicted membrane protein Function unknown 148652576 Common - ABC-1 domain protein PsycPRwf_0767 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 148653103 Nonpathogen - hypothetical protein PsycPRwf_1300 1 None None None 148653767 Common - PhoH family protein PsycPRwf_1970 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 148653734 Common - transcriptional regulator, LysR family PsycPRwf_1937 192 COG0583 LysR, Transcriptional regulator Transcription 148653035 Common - Integrase, catalytic region PsycPRwf_1230 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653951 Nonpathogen - hypothetical protein PsycPRwf_2154 1 None None None 148652179 Common - transposase, IS605 OrfB family PsycPRwf_0367 69 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653788 Common - TatD-related deoxyribonuclease PsycPRwf_1991 229 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 148653554 Common - hypothetical protein PsycPRwf_1757 2 None None None 148652052 Common - transposase IS3/IS911 family protein PsycPRwf_0240 62 None None None 148652779 Common - Entericidin EcnAB PsycPRwf_0972 4 COG5510 COG5510, Predicted small secreted protein Function unknown 148653863 Common - Enoyl-CoA hydratase/isomerase PsycPRwf_2066 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148652295 Common - hypothetical protein PsycPRwf_0483 9 None None None 148652162 Common - phage integrase family protein PsycPRwf_0350 229 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 148652435 Common - HI0933 family protein PsycPRwf_0623 137 COG2081 COG2081, Predicted flavoproteins General function prediction only 148653339 Common - Ferritin, Dps family protein PsycPRwf_1541 143 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 148652081 Common sucC succinyl-CoA synthetase subunit beta PsycPRwf_0269 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 148652132 Nonpathogen - hypothetical protein PsycPRwf_0320 1 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 148653559 Nonpathogen - hypothetical protein PsycPRwf_1762 2 None None None 148651998 Common - ABC-3 protein PsycPRwf_0182 133 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 148653876 Common proA gamma-glutamyl phosphate reductase PsycPRwf_2079 195 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 148652749 Common - preprotein translocase, YajC subunit PsycPRwf_0942 161 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 148652056 Common - glycosyl transferase, group 1 PsycPRwf_0244 228 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 148651827 Common - KAP P-loop domain protein PsycPRwf_0010 32 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 148653343 Common aspA aspartate ammonia-lyase PsycPRwf_1545 230 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 148652412 Common - protein of unknown function DUF477 PsycPRwf_0600 50 COG3762 COG3762, Predicted membrane protein Function unknown 148653694 Common - alpha/beta hydrolase-like protein PsycPRwf_1897 25 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 148653808 Common - acetyl-CoA acetyltransferase PsycPRwf_2011 187 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 148652481 Common - globin PsycPRwf_0670 105 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 148653332 Common - regulatory protein, IclR PsycPRwf_1534 105 COG1414 IclR, Transcriptional regulator Transcription 148652918 Common - sulfate adenylyltransferase PsycPRwf_1111 63 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 148652176 Common - CrcB protein PsycPRwf_0364 36 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 148652687 Common - hypothetical protein PsycPRwf_0878 3 None None None 148652742 Common - Colicin V production protein PsycPRwf_0935 6 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 148652593 Common - hypothetical protein PsycPRwf_0784 4 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 148653517 Common - hypothetical protein PsycPRwf_1720 2 None None None 148652736 Common - chorismate synthase PsycPRwf_0929 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 148654004 Common - tRNA synthetase, class II (D, K and N) PsycPRwf_2207 202 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 148652935 Nonpathogen - hypothetical protein PsycPRwf_1129 1 None None None 148653514 Common - hypothetical protein PsycPRwf_1717 3 None None None 148653322 Common - TonB-dependent siderophore receptor PsycPRwf_1524 103 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 148652450 Common groEL chaperonin GroEL PsycPRwf_0638 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 148652037 Common - molybdopterin converting factor, subunit 1 PsycPRwf_0221 26 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 148654030 Common - protein of unknown function DUF442 PsycPRwf_2233 35 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 148653000 Common - Mn2+ and Fe2+ transporter of the NRAMP family-like protein PsycPRwf_1194 19 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 148653552 Common - PpiC-type peptidyl-prolyl cis-trans isomerase PsycPRwf_1755 159 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 148652120 Common - non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family PsycPRwf_0308 234 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 148651931 Common - 5-carboxymethyl-2-hydroxymuconate isomerase-like protein PsycPRwf_0114 7 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 148654015 Common - low temperature requirement A PsycPRwf_2218 28 COG4292 COG4292, Predicted membrane protein Function unknown 148651858 Common - Dihydrodipicolinate reductase PsycPRwf_0041 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 148653219 Common - ABC transporter related PsycPRwf_1417 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 148653374 Common - protein of unknown function DUF493 PsycPRwf_1576 2 COG2921 COG2921, Uncharacterized conserved protein Function unknown 148652865 Common - IS66 Orf2 family protein PsycPRwf_1058 23 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653983 Common - hypothetical protein PsycPRwf_2186 6 None None None 148652812 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_1005 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652351 Common - protein of unknown function DUF937 PsycPRwf_0539 25 COG3753 COG3753, Uncharacterized protein conserved in bacteria Function unknown 148652534 Common - filamentation induced by cAMP protein Fic PsycPRwf_0723 96 COG3177 COG3177, Uncharacterized conserved protein Function unknown 148652098 Common - lytic murein transglycosylase PsycPRwf_0286 101 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 148652392 Common - heat shock protein 90 PsycPRwf_0580 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 148652512 Nonpathogen - hypothetical protein PsycPRwf_0701 1 None None None 148653283 Common - transposase IS66 PsycPRwf_1482 63 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653532 Common - Abortive infection protein PsycPRwf_1735 42 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 148652691 Common - hypothetical protein PsycPRwf_0882 6 None None None 148653044 Common - aldehyde dehydrogenase PsycPRwf_1240 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652139 Common - cytochrome bd ubiquinol oxidase, subunit I PsycPRwf_0327 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 148653099 Nonpathogen - hypothetical protein PsycPRwf_1296 1 None None None 148652974 Common - alpha/beta hydrolase fold PsycPRwf_1168 141 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148652994 Common - transcriptional regulator, TetR family PsycPRwf_1188 15 COG1309 AcrR, Transcriptional regulator Transcription 148653867 Common - PGAP1 family protein PsycPRwf_2070 18 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 148651878 Common hisH imidazole glycerol phosphate synthase subunit HisH PsycPRwf_0061 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 148651847 Common - protein of unknown function DUF511 PsycPRwf_0030 16 COG2958 COG2958, Uncharacterized protein conserved in bacteria Function unknown 148652217 Common - carbonic anhydrase PsycPRwf_0405 152 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 148653452 Common - putative oxygen-independent coproporphyrinogen III oxidase PsycPRwf_1655 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 148652030 Common - trimethylamine-N-oxide reductase TorA PsycPRwf_0214 168 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 148653248 Common - aldehyde dehydrogenase PsycPRwf_1446 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652129 Common - transposase, IS4 family protein PsycPRwf_0317 77 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652023 Nonpathogen - hypothetical protein PsycPRwf_0207 1 None None None 148653364 Common - Tol-Pal system, TolQ PsycPRwf_1566 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 148652415 Common - transposase, IS605 OrfB family PsycPRwf_0603 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652248 Common rplN 50S ribosomal protein L14 PsycPRwf_0436 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 148654150 Common - efflux transporter, RND family, MFP subunit PsycPRwf_2353 154 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 148654039 Common - putative ABC transporter ATP-binding protein PsycPRwf_2242 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 148652790 Common - hypothetical protein PsycPRwf_0983 5 None None None 148652755 Common - RDD domain containing protein PsycPRwf_0948 2 COG1714 COG1714, Predicted membrane protein/domain Function unknown 148654118 Common - twin-arginine translocation protein, TatB subunit PsycPRwf_2321 86 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 148653174 Common - Glycerate kinase PsycPRwf_1372 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 148653678 Nonpathogen - hypothetical protein PsycPRwf_1881 1 None None None 148652221 Common - coproporphyrinogen III oxidase PsycPRwf_0409 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 148652836 Common - Hemolysin-type calcium-binding region PsycPRwf_1029 115 None None None 148652608 Common - putative methyltransferase PsycPRwf_0799 205 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 148652633 Common - protein of unknown function DUF1239 PsycPRwf_0824 2 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 148653407 Nonpathogen - hypothetical protein PsycPRwf_1609 1 None None None 148652953 Common - DEAD/DEAH box helicase domain protein PsycPRwf_1147 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 148652710 Common - Enoyl-CoA hydratase/isomerase PsycPRwf_0903 181 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148652698 Common rplU 50S ribosomal protein L21 PsycPRwf_0891 77 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 148653212 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_1410 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 148652708 Common - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PsycPRwf_0901 215 COG1049 AcnB, Aconitase B Energy production and conversion 148653958 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_2161 183 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148652797 Common - lipid A biosynthesis acyltransferase PsycPRwf_0990 115 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 148651873 Common - methyltransferase small PsycPRwf_0056 82 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 148653498 Common - hypothetical protein PsycPRwf_1701 17 None None None 148653310 Common - ABC transporter related PsycPRwf_1510 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 148652859 Common - transposase IS3/IS911 family protein PsycPRwf_1052 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654138 Common - protein of unknown function DUF6, transmembrane PsycPRwf_2341 194 COG2510 COG2510, Predicted membrane protein Function unknown 148653159 Common - transposase IS3/IS911 family protein PsycPRwf_1357 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653009 Common - hypothetical protein PsycPRwf_1203 11 None None None 148652726 Common - hypothetical protein PsycPRwf_0919 3 None None None 148653811 Common - transposase, IS605 OrfB family PsycPRwf_2014 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652016 Common rpsP 30S ribosomal protein S16 PsycPRwf_0200 212 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 148653674 Common - acetylornithine deacetylase PsycPRwf_1877 210 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 148653150 Nonpathogen - hypothetical protein PsycPRwf_1348 1 None None None 148653632 Common - beta-lactamase domain protein PsycPRwf_1835 52 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 148652487 Common - ferrous iron transport protein B PsycPRwf_0676 155 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 148653412 Common - HopJ type III effector protein PsycPRwf_1614 15 None None None 148653683 Common - SmpA/OmlA domain protein PsycPRwf_1886 61 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 148652886 Common - transcriptional regulator, LysR family PsycPRwf_1079 183 COG0583 LysR, Transcriptional regulator Transcription 148652434 Common - Amidase PsycPRwf_0622 215 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 148651901 Common - hypothetical protein PsycPRwf_0084 24 None None None 148654063 Common - phosphate uptake regulator, PhoU PsycPRwf_2266 199 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 148651963 Common - protein of unknown function DUF1255 PsycPRwf_0146 41 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 148653658 Common - elongation factor G PsycPRwf_1861 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 148653708 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein PsycPRwf_1911 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 148653618 Common - Muramoyltetrapeptide carboxypeptidase PsycPRwf_1821 78 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 148651920 Common - L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase-like protein PsycPRwf_0103 70 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 148651927 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding PsycPRwf_0110 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 148653161 Common - ATPase associated with various cellular activities, AAA_5 PsycPRwf_1359 58 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 148653598 Common - ribosome recycling factor PsycPRwf_1801 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 148652787 Common - (Glutamate--ammonia-ligase) adenylyltransferase PsycPRwf_0980 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 148652999 Common - Mn2+ and Fe2+ transporter of the NRAMP family-like protein PsycPRwf_1193 18 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 148653223 Common - putative methyltransferase PsycPRwf_1421 18 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 148653353 Nonpathogen - hypothetical protein PsycPRwf_1555 2 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 148654026 Common - transposase, IS605 OrfB family PsycPRwf_2229 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653581 Nonpathogen - hypothetical protein PsycPRwf_1784 1 None None None 148652614 Common - Cytochrome c biogenesis factor-like protein PsycPRwf_0805 30 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 148653481 Common - MltA-interacting MipA family protein PsycPRwf_1684 35 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 148652670 Common - protein of unknown function DUF1255 PsycPRwf_0861 51 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 148653918 Common ompR osmolarity response regulator PsycPRwf_2121 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148652528 Common - hypothetical protein PsycPRwf_0717 17 COG2308 COG2308, Uncharacterized conserved protein Function unknown 148652478 Common - nitrate reductase, beta subunit PsycPRwf_0667 148 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 148653477 Nonpathogen - glutaredoxin 2 PsycPRwf_1680 2 None None None 148654089 Common - Neutral/alkaline nonlysosomal ceramidase PsycPRwf_2292 12 None None None 148653667 Common - LrgB family protein PsycPRwf_1870 65 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 148651880 Common - transmembrane pair domain protein PsycPRwf_0063 41 COG4125 COG4125, Predicted membrane protein Function unknown 148653884 Common - isocitrate dehydrogenase, NADP-dependent PsycPRwf_2087 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 148652582 Common - protein of unknown function DUF218 PsycPRwf_0773 7 COG1434 COG1434, Uncharacterized conserved protein Function unknown 148652728 Common - phospho-2-dehydro-3-heoxyheptonate aldolase PsycPRwf_0921 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 148652058 Common - transferase hexapeptide repeat containing protein PsycPRwf_0246 179 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 148654164 Common - OmpA domain protein transmembrane region-containing protein PsycPRwf_2367 6 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 148652943 Common - UspA domain protein PsycPRwf_1137 32 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 148653292 Common - Integrase, catalytic region PsycPRwf_1492 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653685 Common - hypothetical protein PsycPRwf_1888 2 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 148651946 Common - Pirin domain protein domain protein PsycPRwf_0129 148 COG1741 COG1741, Pirin-related protein General function prediction only 148652802 Common - ATP-dependent helicase HrpA PsycPRwf_0995 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 148652290 Common - protein of unknown function DUF808 PsycPRwf_0478 60 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 148653645 Common - protein of unknown function DUF21 PsycPRwf_1848 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 148653930 Common - poly(A) polymerase PsycPRwf_2133 172 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 148653584 Common - Radical SAM domain protein PsycPRwf_1787 56 COG4277 COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif General function prediction only 148653297 Common - homocysteine S-methyltransferase PsycPRwf_1497 92 COG2040 MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Amino acid transport and metabolism 148654077 Common - glucosamine--fructose-6-phosphate aminotransferase, isomerizing PsycPRwf_2280 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 148652881 Nonpathogen - hypothetical protein PsycPRwf_1074 1 None None None 148653643 Common - O-acetylhomoserine/O-acetylserine sulfhydrylase PsycPRwf_1846 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 148652405 Common - major facilitator superfamily MFS_1 PsycPRwf_0593 139 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148654008 Common glyQ glycyl-tRNA synthetase subunit alpha PsycPRwf_2211 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 148652899 Common - hypothetical protein PsycPRwf_1092 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652565 Common - tryptophan synthase, alpha subunit PsycPRwf_0756 216 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 148653296 Common - transposase IS3/IS911 family protein PsycPRwf_1496 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653278 Common - transposase IS3/IS911 family protein PsycPRwf_1477 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653717 Common - type III restriction enzyme, res subunit PsycPRwf_1920 152 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 148653611 Common - phosphate-starvation-inducible E PsycPRwf_1814 18 COG3223 COG3223, Predicted membrane protein Function unknown 148653944 Common - phospholipid/glycerol acyltransferase PsycPRwf_2147 29 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 148652560 Common - prolyl-tRNA synthetase PsycPRwf_0751 247 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148653449 Common - transcriptional regulator, TetR family PsycPRwf_1652 8 COG1309 AcrR, Transcriptional regulator Transcription 148653923 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase PsycPRwf_2126 211 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 148653497 Common dcd deoxycytidine triphosphate deaminase PsycPRwf_1700 149 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 148652603 Common - cytochrome c1 PsycPRwf_0794 45 COG2857 CYT1, Cytochrome c1 Energy production and conversion 148653166 Common - transposase IS3/IS911 family protein PsycPRwf_1364 9 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652913 Common - TonB-dependent receptor, plug PsycPRwf_1106 94 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 148653659 Common - 30S ribosomal protein S7 PsycPRwf_1862 245 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 148652374 Common - Putative mono-oxygenase ydhR PsycPRwf_0562 17 None None None 148653102 Common - hypothetical protein PsycPRwf_1299 116 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 148652505 Nonpathogen - hypothetical protein PsycPRwf_0694 3 None None None 148652638 Common - thiamine-phosphate pyrophosphorylase PsycPRwf_0829 204 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 148652442 Common - putative ribonuclease BN PsycPRwf_0630 149 COG1295 Rbn, Predicted membrane protein Function unknown 148653859 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_2062 170 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148653281 Common - transposase IS3/IS911 family protein PsycPRwf_1480 9 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653846 Nonpathogen - hypothetical protein PsycPRwf_2049 1 None None None 148653235 Common - crossover junction endodeoxyribonuclease RuvC PsycPRwf_1433 194 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 148652643 Common - carbamoyl phosphate synthase small subunit PsycPRwf_0834 234 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 148652903 Common - iron-containing alcohol dehydrogenase PsycPRwf_1096 166 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 148653250 Common - isocitrate lyase PsycPRwf_1448 115 COG2224 AceA, Isocitrate lyase Energy production and conversion 148651926 Common - hypothetical protein PsycPRwf_0109 15 None None None 148651830 Common - aminotransferase, class I and II PsycPRwf_0013 236 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 148653011 Common - GTP-binding protein, HSR1-related PsycPRwf_1205 17 COG0486 ThdF, Predicted GTPase General function prediction only 148653057 Common - Rubredoxin-type Fe(Cys)4 protein PsycPRwf_1253 115 COG1773 COG1773, Rubredoxin Energy production and conversion 148653715 Common - transposase, IS605 OrfB family PsycPRwf_1918 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652645 Common - Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein PsycPRwf_0836 212 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 148654174 Common - DNA protecting protein DprA PsycPRwf_2377 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 148652114 Common - propionate--CoA ligase PsycPRwf_0302 218 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 148651996 Common - transcriptional regulator, TraR/DksA family PsycPRwf_0180 153 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 148653131 Nonpathogen - hypothetical protein PsycPRwf_1329 1 None None None 148653527 Common - O-succinylhomoserine sulfhydrylase PsycPRwf_1730 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 148652980 Common - beta-Ig-H3/fasciclin PsycPRwf_1174 67 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 148653577 Common - Auxin Efflux Carrier PsycPRwf_1780 49 COG0679 COG0679, Predicted permeases General function prediction only 148652320 Common - secretion protein HlyD family protein PsycPRwf_0508 161 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 148653878 Common - oligoendopeptidase F PsycPRwf_2081 83 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 148652160 Common - diaminopimelate decarboxylase PsycPRwf_0348 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 148652689 Common - endonuclease III PsycPRwf_0880 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 148652872 Common - membrane protein-like protein PsycPRwf_1065 33 COG4291 COG4291, Predicted membrane protein Function unknown 148653394 Common - ATP-dependent Clp protease adaptor protein ClpS PsycPRwf_1596 119 COG2127 COG2127, Uncharacterized conserved protein Function unknown 148653565 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PsycPRwf_1768 212 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 148651906 Common avtA valine--pyruvate transaminase PsycPRwf_0089 147 COG3977 COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase Amino acid transport and metabolism 148652345 Common - protein of unknown function UPF0044 PsycPRwf_0533 94 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 148653096 Common - hypothetical protein PsycPRwf_1293 2 None None None 148652532 Common - isochorismatase hydrolase PsycPRwf_0721 112 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 148652241 Common rplB 50S ribosomal protein L2 PsycPRwf_0429 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 148652627 Common - protein of unknown function UPF0079 PsycPRwf_0818 197 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 148651955 Common - rRNA (guanine-N(1)-)-methyltransferase PsycPRwf_0138 55 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 148652174 Common - Cytochrome c5-like protein PsycPRwf_0362 41 COG3245 CycB, Cytochrome c5 Energy production and conversion 148654153 Common - Gluconate 2-dehydrogenase (acceptor) PsycPRwf_2356 61 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 148653183 Nonpathogen - hypothetical protein PsycPRwf_1381 1 None None None 148653531 Common - tRNA-dihydrouridine synthase A PsycPRwf_1734 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 148653560 Common - tRNA (guanine-N(7)-)-methyltransferase PsycPRwf_1763 177 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 148653968 Common - UspA domain protein PsycPRwf_2171 31 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 148654002 Common - phosphoribosylaminoimidazole carboxylase, ATPase subunit PsycPRwf_2205 200 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 148654165 Common - OmpA domain protein transmembrane region-containing protein PsycPRwf_2368 9 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 148653779 Common - Uncharacterized protein-like protein PsycPRwf_1982 15 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 148653770 Common - hypothetical protein PsycPRwf_1973 5 None None None 148653436 Common - nucleoside-diphosphate-sugar epimerase-like protein PsycPRwf_1639 59 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 148653824 Common - hypothetical protein PsycPRwf_2027 12 None None None 148653387 Common - CMP/dCMP deaminase, zinc-binding PsycPRwf_1589 216 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 148654021 Common - Allophanate hydrolase subunit 1 PsycPRwf_2224 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 148652818 Common - Uncharacterized MobA-related protein-like protein PsycPRwf_1011 6 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 148654140 Nonpathogen - hypothetical protein PsycPRwf_2343 1 None None None 148652809 Common - methylated-DNA--protein-cysteine methyltransferase PsycPRwf_1002 203 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 148653146 Nonpathogen - hypothetical protein PsycPRwf_1344 1 None None None 148653140 Nonpathogen - hypothetical protein PsycPRwf_1338 1 None None None 148652007 Common - F0F1 ATP synthase subunit alpha PsycPRwf_0191 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 148653726 Nonpathogen - hypothetical protein PsycPRwf_1929 1 None None None 148652330 Nonpathogen - hypothetical protein PsycPRwf_0518 2 None None None 148652616 Common - preprotein translocase subunit SecB PsycPRwf_0807 108 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 148653607 Common - Adenylosuccinate synthase PsycPRwf_1810 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 148652772 Common - sensory histidine kinase CreC PsycPRwf_0965 182 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148652596 Common - protein of unknown function DUF344 PsycPRwf_0787 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 148652927 Common - Integrase, catalytic region PsycPRwf_1120 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653904 Common - peptidyl-tRNA hydrolase PsycPRwf_2107 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 148653136 Nonpathogen - hypothetical protein PsycPRwf_1334 1 None None None 148652284 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_0472 152 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148653933 Common thrS threonyl-tRNA synthetase PsycPRwf_2136 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652526 Common - twin-arginine translocation protein, TatB subunit PsycPRwf_0715 111 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 148652825 Common - putative transcriptional regulator, AsnC family PsycPRwf_1018 168 COG1522 Lrp, Transcriptional regulators Transcription 148652800 Common - alpha/beta hydrolase fold PsycPRwf_0993 187 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653489 Common - NADH dehydrogenase subunit I PsycPRwf_1692 189 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 148651989 Common - nitrogen regulatory protein P-II PsycPRwf_0173 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 148653110 Common - hypothetical protein PsycPRwf_1308 6 None None None 148651887 Common - lipoyltransferase and lipoate-protein ligase PsycPRwf_0070 74 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 148652766 Nonpathogen - hypothetical protein PsycPRwf_0959 1 None None None 148653473 Nonpathogen - hypothetical protein PsycPRwf_1676 1 None None None 148652490 Common - ABC transporter related PsycPRwf_0679 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 148653601 Common - signal transduction histidine kinase, nitrogen specific, NtrB PsycPRwf_1804 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 148654119 Common - Sec-independent protein translocase, TatC subunit PsycPRwf_2322 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 148653961 Common - heme exporter protein CcmA PsycPRwf_2164 248 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 148653692 Common - FAD dependent oxidoreductase PsycPRwf_1895 8 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 148652458 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_0646 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148651973 Common infB translation initiation factor IF-2 PsycPRwf_0157 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 148652130 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_0318 210 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148653400 Common - glyceraldehyde-3-phosphate dehydrogenase PsycPRwf_1602 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 148653628 Common - hypothetical protein PsycPRwf_1831 2 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 148653330 Common - 4-aminobutyrate aminotransferase PsycPRwf_1532 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 148652437 Common - NAD/FAD-dependent oxidoreductase-like protein PsycPRwf_0625 28 COG3380 COG3380, Predicted NAD/FAD-dependent oxidoreductase General function prediction only 148652194 Common - formamidopyrimidine-DNA glycosylase PsycPRwf_0382 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 148653478 Common - L-lactate transport PsycPRwf_1681 103 COG1620 LldP, L-lactate permease Energy production and conversion 148652173 Nonpathogen - hypothetical protein PsycPRwf_0361 1 None None None 148653557 Common - hypothetical protein PsycPRwf_1760 2 None None None 148652261 Common rpsD 30S ribosomal protein S4 PsycPRwf_0449 216 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 148653468 Common - porin, Gram-negative type PsycPRwf_1671 33 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 148653018 Common - UvrD/REP helicase PsycPRwf_1212 151 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 148653344 Common - hypothetical protein PsycPRwf_1546 3 None None None 148652424 Nonpathogen - hypothetical protein PsycPRwf_0612 2 None None None 148654040 Common - acetyltransferase-like protein PsycPRwf_2243 57 COG2388 COG2388, Predicted acetyltransferase General function prediction only 148651975 Common - tRNA pseudouridine synthase B PsycPRwf_0159 243 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 148653621 Common - UvrD/REP helicase PsycPRwf_1824 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 148652429 Common - arginyl-tRNA-protein transferase PsycPRwf_0617 86 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 148652064 Common - protein tyrosine phosphatase PsycPRwf_0252 128 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 148653799 Common - protein of unknown function DUF1212 PsycPRwf_2002 41 COG2966 COG2966, Uncharacterized conserved protein Function unknown 148652227 Common - hypothetical protein PsycPRwf_0415 40 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 148653329 Common - amino acid permease-associated region PsycPRwf_1531 161 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 148652892 Common - KWG Leptospira repeat protein PsycPRwf_1085 10 None None None 148652268 Common - malonyl CoA-acyl carrier protein transacylase PsycPRwf_0456 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 148653706 Common - translation-associated GTPase PsycPRwf_1909 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 148652293 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 PsycPRwf_0481 173 COG0546 Gph, Predicted phosphatases General function prediction only 148654098 Common - isochorismatase hydrolase PsycPRwf_2301 81 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 148652083 Common - Nucleotidyl transferase PsycPRwf_0271 231 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 148654120 Common - Superfamily I DNA and RNA helicase-like protein PsycPRwf_2323 30 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 148652356 Common - pyridoxamine 5'-phosphate oxidase-related, FMN-binding PsycPRwf_0544 38 COG3871 COG3871, Uncharacterized stress protein (general stress protein 26) General function prediction only 148653736 Common - sodium/proline symporter PsycPRwf_1939 187 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 148652466 Common - outer membrane efflux protein PsycPRwf_0654 28 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 148653545 Common - Cytochrome c oxidase cbb3 type, accessory protein FixG PsycPRwf_1748 86 COG0348 NapH, Polyferredoxin Energy production and conversion 148652039 Common - molybdate ABC transporter, inner membrane subunit PsycPRwf_0223 203 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 148653755 Nonpathogen - hypothetical protein PsycPRwf_1958 1 None None None 148652937 Nonpathogen - hypothetical protein PsycPRwf_1131 1 None None None 148653739 Common - hypothetical protein PsycPRwf_1942 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 148651841 Common oppD oligopeptide transporter ATP-binding component PsycPRwf_0024 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 148652491 Common - polar amino acid ABC transporter, inner membrane subunit PsycPRwf_0680 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 148653336 Common - transketolase PsycPRwf_1538 223 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 148652398 Nonpathogen - hypothetical protein PsycPRwf_0586 1 None None None 148652122 Common - protein of unknown function DUF72 PsycPRwf_0310 73 COG1801 COG1801, Uncharacterized conserved protein Function unknown 148653763 Common - protein of unknown function DUF340, membrane PsycPRwf_1966 49 COG2431 COG2431, Predicted membrane protein Function unknown 148652151 Common - RDD domain containing protein PsycPRwf_0339 13 COG1714 COG1714, Predicted membrane protein/domain Function unknown 148652731 Common - hypothetical protein PsycPRwf_0924 10 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653197 Common - lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA PsycPRwf_1395 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 148653080 Common - hypothetical protein PsycPRwf_1277 10 COG3179 COG3179, Predicted chitinase General function prediction only 148653026 Common - protein of unknown function DUF6, transmembrane PsycPRwf_1221 107 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 148653415 Common ppnK inorganic polyphosphate/ATP-NAD kinase PsycPRwf_1617 238 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 148652868 Common potA putrescine/spermidine ABC transporter ATPase protein PsycPRwf_1061 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 148653276 Common - hypothetical protein PsycPRwf_1475 24 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 148653741 Common - Integrase, catalytic region PsycPRwf_1944 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653897 Common fadB multifunctional fatty acid oxidation complex subunit alpha PsycPRwf_2100 189 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 148653256 Common - DNA polymerase III, subunits gamma and tau PsycPRwf_1454 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 148652519 Common - hypothetical protein PsycPRwf_0708 20 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 148652304 Common - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase PsycPRwf_0492 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 148652668 Nonpathogen - hypothetical protein PsycPRwf_0859 1 None None None 148652852 Common - diacylglycerol kinase PsycPRwf_1045 61 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 148653840 Common - elongation factor Tu PsycPRwf_2043 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 148653665 Common - GTP-binding protein, HSR1-related PsycPRwf_1868 210 COG2262 HflX, GTPases General function prediction only 148654127 Common - prolipoprotein diacylglyceryl transferase PsycPRwf_2330 204 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 148653105 Nonpathogen - hypothetical protein PsycPRwf_1303 1 None None None 148654080 Common - thiamine-monophosphate kinase PsycPRwf_2283 189 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 148653506 Common metG methionyl-tRNA synthetase PsycPRwf_1709 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148653033 Nonpathogen - hypothetical protein PsycPRwf_1228 1 None None None 148654087 Common - glutamine amidotransferase, class-II PsycPRwf_2290 67 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 148653014 Common - carbon starvation protein CstA PsycPRwf_1208 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 148652863 Common - hypothetical protein PsycPRwf_1056 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653315 Common - YceI family protein PsycPRwf_1515 106 COG2353 COG2353, Uncharacterized conserved protein Function unknown 148652069 Common - recombination factor protein RarA PsycPRwf_0257 243 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 148652853 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_1046 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148653871 Common - extracellular solute-binding protein, family 3 PsycPRwf_2074 182 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 148653785 Nonpathogen - hypothetical protein PsycPRwf_1988 1 None None None 148652228 Common - protein of unknown function DUF560 PsycPRwf_0416 12 None None None 148653764 Common - OmpA/MotB domain protein PsycPRwf_1967 69 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148653393 Common - Pyruvate oxidase PsycPRwf_1595 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 148652801 Common - hypothetical protein PsycPRwf_0994 9 None None None 148652701 Common - transcriptional regulator, TetR family PsycPRwf_0894 77 COG1309 AcrR, Transcriptional regulator Transcription 148652824 Common - Lysine exporter protein (LYSE/YGGA) PsycPRwf_1017 96 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 148653024 Common - Dyp-type peroxidase family PsycPRwf_1218 25 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 148653730 Common - ErfK/YbiS/YcfS/YnhG family protein PsycPRwf_1933 90 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 148653742 Nonpathogen - hypothetical protein PsycPRwf_1945 1 None None None 148651871 Common - permease YjgP/YjgQ family protein PsycPRwf_0054 58 COG0795 COG0795, Predicted permeases General function prediction only 148652718 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_0911 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148653714 Nonpathogen - hypothetical protein PsycPRwf_1917 1 None None None 148653443 Common - glutamine amidotransferase of anthranilate synthase PsycPRwf_1646 235 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 148652168 Common - RNA polymerase factor sigma-32 PsycPRwf_0356 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 148654081 Common - NusB antitermination factor PsycPRwf_2284 75 COG0781 NusB, Transcription termination factor Transcription 148654126 Common - protein of unknown function DUF833 PsycPRwf_2329 48 COG3332 COG3332, Uncharacterized conserved protein Function unknown 148652167 Common - protein of unknown function DUF423 PsycPRwf_0355 47 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 148652312 Common - BolA family protein PsycPRwf_0500 56 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 148653079 Common - hypothetical protein PsycPRwf_1276 13 None None None 148653277 Common - Integrase, catalytic region PsycPRwf_1476 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653038 Common - isochorismatase hydrolase PsycPRwf_1233 70 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 148651979 Common rpsO 30S ribosomal protein S15 PsycPRwf_0163 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 148653419 Common - hypothetical protein PsycPRwf_1621 3 None None None 148653972 Nonpathogen - hypothetical protein PsycPRwf_2175 1 None None None 148652737 Common - nitroreductase PsycPRwf_0930 89 COG0778 NfnB, Nitroreductase Energy production and conversion 148653542 Common - cytochrome c oxidase, cbb3-type, subunit II PsycPRwf_1745 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 148653335 Common - regulatory protein, IclR PsycPRwf_1537 84 COG1414 IclR, Transcriptional regulator Transcription 148653592 Common - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase PsycPRwf_1795 150 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 148653192 Common - acetyl-CoA acetyltransferase PsycPRwf_1390 178 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 148654187 Common - ribonuclease P protein component PsycPRwf_2390 62 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 148652497 Common - phage integrase family protein PsycPRwf_0686 91 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 148653245 Common - ABC transporter related PsycPRwf_1443 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 148652029 Common - trimethylamine-N-oxide reductase c-type cytochrome TorC PsycPRwf_0213 47 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 148652197 Common - hypothetical protein PsycPRwf_0385 29 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 148653697 Common - Uncharacterized protein-like protein PsycPRwf_1900 40 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 148652914 Common - uroporphyrin-III C-methyltransferase PsycPRwf_1107 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 148651856 Common - chaperone protein DnaJ PsycPRwf_0039 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 148651966 Common - peptidase A24A domain protein PsycPRwf_0149 134 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 148653756 Nonpathogen - hypothetical protein PsycPRwf_1959 1 None None None 148653410 Common - aspartate kinase PsycPRwf_1612 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 148653309 Common - transport system permease protein PsycPRwf_1509 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 148653804 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain protein PsycPRwf_2007 146 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 148654099 Common - acetyltransferase-like protein PsycPRwf_2302 37 COG2388 COG2388, Predicted acetyltransferase General function prediction only 148654173 Common - SUA5/yciO/yrdC, N-terminal domain PsycPRwf_2376 110 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 148652420 Common queF 7-cyano-7-deazaguanine reductase PsycPRwf_0608 110 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 148654053 Common - protein of unknown function UPF0227 PsycPRwf_2256 47 COG3150 COG3150, Predicted esterase General function prediction only 148654146 Common - OmpW family protein PsycPRwf_2349 19 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 148652453 Common - protein of unknown function DUF528 PsycPRwf_0641 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 148652141 Common - cyd operon protein YbgT PsycPRwf_0329 3 COG4890 COG4890, Predicted outer membrane lipoprotein Function unknown 148653450 Common - Endonuclease/exonuclease/phosphatase PsycPRwf_1653 13 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 148653234 Common - FxsA cytoplasmic membrane protein PsycPRwf_1432 2 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 148651842 Common - oligopeptide/dipeptide ABC transporter, ATPase subunit PsycPRwf_0025 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 148653608 Common - ATP phosphoribosyltransferase regulatory subunit PsycPRwf_1811 113 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 148653849 Common - hypothetical protein PsycPRwf_2052 13 None None None 148652203 Common - Cobyrinic acid a,c-diamide synthase PsycPRwf_0391 143 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 148653558 Common - potassium efflux system protein PsycPRwf_1761 207 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 148652683 Common - Glutathione S-transferase, N-terminal domain PsycPRwf_0874 70 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652125 Common - OmpA/MotB domain protein PsycPRwf_0313 162 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148652263 Common rplQ 50S ribosomal protein L17 PsycPRwf_0451 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 148652394 Common - acyl-CoA synthetase PsycPRwf_0582 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148652885 Common - transposase, IS605 OrfB family PsycPRwf_1078 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652878 Common - iron-containing alcohol dehydrogenase PsycPRwf_1071 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 148653707 Nonpathogen - hypothetical protein PsycPRwf_1910 1 None None None 148654116 Common - phosphoribosyl-AMP cyclohydrolase PsycPRwf_2319 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 148654157 Common - protein of unknown function DUF6, transmembrane PsycPRwf_2360 9 None None None 148652778 Common - Inorganic diphosphatase PsycPRwf_0971 187 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 148653797 Common - nitroreductase PsycPRwf_2000 87 COG0778 NfnB, Nitroreductase Energy production and conversion 148652838 Common - transcriptional regulator, LysR family PsycPRwf_1031 181 COG0583 LysR, Transcriptional regulator Transcription 148652595 Common - hypothetical protein PsycPRwf_0786 11 None None None 148651980 Common - polynucleotide phosphorylase/polyadenylase PsycPRwf_0164 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 148652542 Common - transcriptional regulator, GntR family PsycPRwf_0732 112 COG2188 PhnF, Transcriptional regulators Transcription 148653536 Common - lipoprotein releasing system, ATP-binding protein PsycPRwf_1739 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 148654001 Common - phosphoribosylaminoimidazole carboxylase, catalytic subunit PsycPRwf_2204 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 148653326 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_1528 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 148652006 Common - ATP synthase F1, delta subunit PsycPRwf_0190 157 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 148651983 Common - lytic murein transglycosylase PsycPRwf_0167 108 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 148653141 Common - putative prophage repressor PsycPRwf_1339 30 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 148651864 Common - iron-sulfur cluster assembly accessory protein PsycPRwf_0047 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 148652159 Nonpathogen - hypothetical protein PsycPRwf_0347 1 None None None 148653354 Common - hypothetical protein PsycPRwf_1556 3 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 148653602 Common - nitrogen metabolism transcriptional regulator, NtrC, Fis Family PsycPRwf_1805 217 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 148653812 Nonpathogen - hypothetical protein PsycPRwf_2015 1 None None None 148653366 Nonpathogen - TonB family protein PsycPRwf_1568 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 148653816 Common - Tfp pilus assembly protein PilE-like protein PsycPRwf_2019 66 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 148652196 Common rumA 23S rRNA 5-methyluridine methyltransferase PsycPRwf_0384 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 148653372 Common - DNA primase PsycPRwf_1574 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 148653837 Common rplK 50S ribosomal protein L11 PsycPRwf_2040 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 148653713 Common - oxidoreductase FAD/NAD(P)-binding domain protein PsycPRwf_1916 102 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 148652770 Common - glutaredoxin-like protein PsycPRwf_0963 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 148652249 Common rplX 50S ribosomal protein L24 PsycPRwf_0437 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 148654058 Common - thioesterase superfamily protein PsycPRwf_2261 58 COG0824 FcbC, Predicted thioesterase General function prediction only 148653561 Common - protein of unknown function DUF163 PsycPRwf_1764 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 148654161 Common - band 7 protein PsycPRwf_2364 213 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 148652417 Common - cytochrome c, class I PsycPRwf_0605 46 COG3245 CycB, Cytochrome c5 Energy production and conversion 148654160 Common - Uncharacterized protein-like protein PsycPRwf_2363 30 COG4222 COG4222, Uncharacterized protein conserved in bacteria Function unknown 148652172 Common rpsU 30S ribosomal protein S21 PsycPRwf_0360 106 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 148653725 Nonpathogen - hypothetical protein PsycPRwf_1928 1 None None None 148653821 Common - hypothetical protein PsycPRwf_2024 8 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 148651951 Common - Peptidoglycan glycosyltransferase PsycPRwf_0134 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 148652210 Common - Tfp pilus assembly protein PilO-like protein PsycPRwf_0398 6 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 148652190 Nonpathogen - hypothetical protein PsycPRwf_0378 2 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 148652387 Common - metal dependent phosphohydrolase PsycPRwf_0575 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 148654032 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PsycPRwf_2235 249 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 148652841 Common - MscS Mechanosensitive ion channel PsycPRwf_1034 180 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148651836 Common - extracellular solute-binding protein, family 5 PsycPRwf_0019 198 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 148652305 Common - nitroreductase PsycPRwf_0493 89 COG0778 NfnB, Nitroreductase Energy production and conversion 148653349 Common - major facilitator superfamily MFS_1 PsycPRwf_1551 145 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 148652075 Common sdhA succinate dehydrogenase flavoprotein subunit PsycPRwf_0263 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 148653222 Common - ABC-1 domain protein PsycPRwf_1420 181 COG0661 AarF, Predicted unusual protein kinase General function prediction only 148653340 Common - anion transporter PsycPRwf_1542 145 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 148653454 Common - acetyl-CoA carboxylase, biotin carboxyl carrier protein PsycPRwf_1657 177 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 148653306 Common - TonB-dependent receptor PsycPRwf_1506 116 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 148653177 Common - ABC transporter related PsycPRwf_1375 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 148652965 Common - protein of unknown function DUF980 PsycPRwf_1159 58 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 148652184 Common - GTP-binding protein LepA PsycPRwf_0372 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 148652674 Common cls cardiolipin synthetase PsycPRwf_0865 143 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 148651889 Common - cytochrome B561 PsycPRwf_0072 82 COG3038 CybB, Cytochrome B561 Energy production and conversion 148653907 Common - NADH:flavin oxidoreductase/NADH oxidase PsycPRwf_2110 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 148652175 Common - putative metalloendopeptidase, glycoprotease family PsycPRwf_0363 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 148651939 Common - hypothetical protein PsycPRwf_0122 2 None None None 148653054 Common - chorismate mutase PsycPRwf_1250 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 148653574 Common - transposase, IS605 OrfB family PsycPRwf_1777 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653456 Common - Argininosuccinate synthase PsycPRwf_1659 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 148653285 Common - hydrolase of the alpha/beta superfamily-like protein PsycPRwf_1484 34 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 148653093 Common - hypothetical protein PsycPRwf_1290 64 COG2836 COG2836, Uncharacterized conserved protein Function unknown 148653088 Common - hypothetical protein PsycPRwf_1285 2 None None None 148653261 Common - ATPase/kinase involved in NAD metabolism-like protein PsycPRwf_1459 30 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 148652625 Common - methionine-R-sulfoxide reductase PsycPRwf_0816 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 148652476 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_0664 143 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 148653780 Common - GCN5-related N-acetyltransferase PsycPRwf_1983 15 COG0456 RimI, Acetyltransferases General function prediction only 148652219 Common - MscS Mechanosensitive ion channel PsycPRwf_0407 210 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148652535 Common - hypothetical protein PsycPRwf_0725 6 None None None 148651821 Common - DNA replication and repair protein RecF PsycPRwf_0004 153 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 148653218 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_1416 102 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 148653524 Common - 3'-5' exonuclease PsycPRwf_1727 108 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 148653050 Common - dihydroneopterin aldolase PsycPRwf_1246 117 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 148652234 Common - hypothetical protein PsycPRwf_0422 45 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 148653081 Nonpathogen - hypothetical protein PsycPRwf_1278 1 None None None 148652928 Common - hypothetical protein PsycPRwf_1121 7 None None None 148652380 Common - FAD linked oxidase domain protein PsycPRwf_0568 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 148653043 Common - peptidase M19, renal dipeptidase PsycPRwf_1239 98 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 148653007 Common - ABC transporter related PsycPRwf_1201 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 148652271 Common - hypothetical protein PsycPRwf_0459 58 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 148653614 Common - fimbrial biogenesis outer membrane usher protein PsycPRwf_1817 37 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 148652930 Common - Uncharacterized protein-like protein PsycPRwf_1124 15 COG4688 COG4688, Uncharacterized protein conserved in bacteria Function unknown 148653426 Common - transcriptional regulator, BadM/Rrf2 family PsycPRwf_1628 161 COG1959 COG1959, Predicted transcriptional regulator Transcription 148653200 Common - methyltransferase GidB PsycPRwf_1398 200 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 148652170 Common - peptidase M48, Ste24p PsycPRwf_0358 125 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 148652323 Common - HpcH/HpaI aldolase PsycPRwf_0511 113 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 148652377 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PsycPRwf_0565 36 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 148652328 Nonpathogen - hypothetical protein PsycPRwf_0516 5 None None None 148652486 Nonpathogen - FeoA family protein PsycPRwf_0675 4 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 148652278 Common - protein of unknown function DUF81 PsycPRwf_0466 89 COG0730 COG0730, Predicted permeases General function prediction only 148651949 Common - S-adenosyl-methyltransferase MraW PsycPRwf_0132 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 148653346 Common - molybdopterin oxidoreductase PsycPRwf_1548 187 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 148653548 Nonpathogen - hypothetical protein PsycPRwf_1751 1 None None None 148653494 Common - bifunctional NADH:ubiquinone oxidoreductase subunit C/D PsycPRwf_1697 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 148652521 Common - copper-resistance protein, CopA family PsycPRwf_0710 118 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 148653750 Common - tryptophanyl-tRNA synthetase PsycPRwf_1953 223 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652564 Common - tryptophan synthase subunit beta PsycPRwf_0755 228 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 148652923 Nonpathogen - hypothetical protein PsycPRwf_1116 1 None None None 148653138 Nonpathogen - hypothetical protein PsycPRwf_1336 1 None None None 148653916 Common - short chain dehydrogenase PsycPRwf_2119 228 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652473 Common - periplasmic binding protein PsycPRwf_0661 40 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 148652639 Common - Hydroxyethylthiazole kinase PsycPRwf_0830 77 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 148652558 Common - potassium uptake protein, TrkH family PsycPRwf_0749 111 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 148653895 Nonpathogen - hypothetical protein PsycPRwf_2098 1 None None None 148651907 Common - major facilitator superfamily MFS_1 PsycPRwf_0090 80 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 148653651 Common - membrane protein-like protein PsycPRwf_1854 10 COG3305 COG3305, Predicted membrane protein Function unknown 148652609 Common - Peptidoglycan glycosyltransferase PsycPRwf_0800 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 148652447 Common - NAD/NADP transhydrogenase alpha subunit-like protein PsycPRwf_0635 117 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 148652556 Common - protein of unknown function DUF6, transmembrane PsycPRwf_0747 75 None None None 148654079 Common - phosphatidylglycerophosphatase A PsycPRwf_2282 104 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 148652269 Common - 3-oxoacyl-(acyl-carrier-protein) reductase PsycPRwf_0457 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148651971 Common - protein of unknown function DUF150 PsycPRwf_0155 150 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 148653681 Common - twitching motility protein PsycPRwf_1884 194 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 148654072 Common - hypothetical protein PsycPRwf_2275 3 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 148652549 Common - fumarylacetoacetate (FAA) hydrolase PsycPRwf_0740 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 148652667 Common - protein of unknown function UPF0027 PsycPRwf_0858 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 148653231 Common - two component transcriptional regulator, LuxR family PsycPRwf_1429 216 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 148653772 Common fumC fumarate hydratase PsycPRwf_1975 238 COG0114 FumC, Fumarase Energy production and conversion 148653890 Common - two component transcriptional regulator, winged helix family PsycPRwf_2093 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148652258 Common secY preprotein translocase subunit SecY PsycPRwf_0446 247 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 148652902 Common - Alcohol dehydrogenase, zinc-binding domain protein PsycPRwf_1095 82 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 148654151 Common - acriflavin resistance protein PsycPRwf_2354 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 148652430 Common aat leucyl/phenylalanyl-tRNA--protein transferase PsycPRwf_0618 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 148652085 Common - UDP-glucose/GDP-mannose dehydrogenase, dimerisation PsycPRwf_0273 182 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 148653572 Common - Pyrrolo-quinoline quinone PsycPRwf_1775 59 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 148653915 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 PsycPRwf_2118 195 COG0546 Gph, Predicted phosphatases General function prediction only 148652456 Common - protein of unknown function DUF519 PsycPRwf_0644 84 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 148654092 Common - DNA/RNA non-specific endonuclease PsycPRwf_2295 38 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 148651819 Common - chromosomal replication initiator protein DnaA PsycPRwf_0002 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 148653843 Common prfC peptide chain release factor 3 PsycPRwf_2046 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 148652753 Common - Phosphoglycerate mutase PsycPRwf_0946 5 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 148653229 Common - transcriptional regulator, TraR/DksA family PsycPRwf_1427 87 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 148654061 Common - argininosuccinate lyase PsycPRwf_2264 237 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 148653462 Common - heavy metal translocating P-type ATPase PsycPRwf_1665 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 148653126 Common - transcriptional regulator, LysR family PsycPRwf_1324 193 COG0583 LysR, Transcriptional regulator Transcription 148653482 Common - hypothetical protein PsycPRwf_1685 2 None None None 148653680 Common - alanine racemase domain protein PsycPRwf_1883 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 148653479 Common - FMN-dependent alpha-hydroxy acid dehydrogenase PsycPRwf_1682 115 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 148651916 Common - Na(+)-translocating NADH-quinone reductase subunit B PsycPRwf_0099 76 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 148654006 Common - protein of unknown function UPF0118 PsycPRwf_2209 126 COG0628 PerM, Predicted permease General function prediction only 148651957 Common - SirA family protein PsycPRwf_0140 88 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 148653264 Common - FMN-dependent alpha-hydroxy acid dehydrogenase PsycPRwf_1462 110 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 148652786 Common - phosphoesterase, PA-phosphatase related PsycPRwf_0979 79 None None None 148652939 Common - sulfate ABC transporter, periplasmic sulfate-binding protein PsycPRwf_1133 88 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 148653538 Common - hypothetical protein PsycPRwf_1741 2 None None None 148653687 Common - hypothetical protein PsycPRwf_1890 35 COG3245 CycB, Cytochrome c5 Energy production and conversion 148652337 Common - UDP-N-acetylmuramate--alanine ligase PsycPRwf_0525 210 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 148652640 Common - rare lipoprotein A PsycPRwf_0831 135 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 148652950 Common - glutamate dehydrogenase PsycPRwf_1144 166 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 148653253 Nonpathogen - hypothetical protein PsycPRwf_1451 1 None None None 148652725 Common - Peptidoglycan-associated lipoprotein PsycPRwf_0918 157 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148653974 Nonpathogen - hypothetical protein PsycPRwf_2177 1 None None None 148652136 Common - protein of unknown function DUF344 PsycPRwf_0324 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 148653101 Common - putative lipoprotein PsycPRwf_1298 15 None None None 148653935 Common - toxic anion resistance family protein PsycPRwf_2138 35 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 148652727 Common - aminopeptidase N PsycPRwf_0920 158 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 148653469 Common - malate synthase G PsycPRwf_1672 78 COG2225 AceB, Malate synthase Energy production and conversion 148653077 Nonpathogen - hypothetical protein PsycPRwf_1274 1 COG3224 COG3224, Uncharacterized protein conserved in bacteria Function unknown 148652014 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_0198 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148652286 Common - FAD dependent oxidoreductase PsycPRwf_0474 137 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 148652019 Common rplS 50S ribosomal protein L19 PsycPRwf_0203 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 148652709 Common - putative transcriptional regulator, GntR family PsycPRwf_0902 228 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 148652584 Common - protein tyrosine phosphatase PsycPRwf_0775 134 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 148652652 Common - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase PsycPRwf_0843 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 148653988 Common - ribonuclease PH PsycPRwf_2191 196 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 148652816 Common - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding PsycPRwf_1009 120 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 148653590 Common - UDP-N-acetylglucosamine acyltransferase PsycPRwf_1793 183 COG1043 LpxA, Acyl- acyl carrier protein 148652206 Common - hypothetical protein PsycPRwf_0394 113 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 148653368 Common - NADPH-dependent FMN reductase PsycPRwf_1570 76 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 148654028 Common - thioredoxin PsycPRwf_2231 230 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 148651844 Nonpathogen - hypothetical protein PsycPRwf_0027 1 None None None 148652811 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_1004 147 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148652795 Common - hypothetical protein PsycPRwf_0988 20 None None None 148652045 Common - NAD-dependent epimerase/dehydratase PsycPRwf_0229 229 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 148651950 Common - cell division protein FtsL PsycPRwf_0133 2 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 148652251 Common rpsN 30S ribosomal protein S14 PsycPRwf_0439 207 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 148653508 Common - protein of unknown function DUF534 PsycPRwf_1711 57 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 148652630 Common - RNA chaperone Hfq PsycPRwf_0821 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 148653320 Common - Nitric oxide reductase large subunit-like protein PsycPRwf_1520 76 COG3256 NorB, Nitric oxide reductase large subunit Inorganic ion transport and metabolism 148652095 Common - protein of unknown function DUF1285 PsycPRwf_0283 44 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 148652908 Common - methyltransferase small PsycPRwf_1101 56 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 148652012 Common - two component transcriptional regulator, winged helix family PsycPRwf_0196 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148653421 Common - transcriptional regulator, Fis family PsycPRwf_1623 100 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 148652062 Common - polysaccharide biosynthesis protein CapD PsycPRwf_0250 168 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 148652826 Common - 2-isopropylmalate synthase PsycPRwf_1019 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 148652343 Nonpathogen - hypothetical protein PsycPRwf_0531 1 None None None 148652404 Common - signal recognition particle protein PsycPRwf_0592 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 148652041 Common - aromatic amino acid aminotransferase PsycPRwf_0225 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 148653434 Common - transcription-repair coupling factor PsycPRwf_1636 227 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 148653066 Common - MscS Mechanosensitive ion channel PsycPRwf_1262 97 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148652134 Common - alkylphosphonate utilization operon protein PhnA PsycPRwf_0322 102 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 148653834 Common rplL 50S ribosomal protein L7/L12 PsycPRwf_2037 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 148653073 Common - malic enzyme PsycPRwf_1269 217 COG0281 SfcA, Malic enzyme Energy production and conversion 148654132 Common - amino acid/peptide transporter PsycPRwf_2335 80 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 148653515 Common - Uncharacterized protein-like protein PsycPRwf_1718 59 COG3825 COG3825, Uncharacterized protein conserved in bacteria Function unknown 148652761 Common - ABC transporter related PsycPRwf_0954 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 148652225 Nonpathogen - hypothetical protein PsycPRwf_0413 1 None None None 148652977 Common - transcriptional regulator, HxlR family PsycPRwf_1171 137 COG1733 COG1733, Predicted transcriptional regulators Transcription 148653028 Common - hypothetical protein PsycPRwf_1223 10 COG3179 COG3179, Predicted chitinase General function prediction only 148653501 Common - 3-hydroxybutyrate dehydrogenase PsycPRwf_1704 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652460 Common - hypothetical protein PsycPRwf_0648 27 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 148651882 Common - protein of unknown function DUF1622 PsycPRwf_0065 27 COG4828 COG4828, Predicted membrane protein Function unknown 148653385 Common rpsA 30S ribosomal protein S1 PsycPRwf_1587 218 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 148654105 Common - pseudouridine synthase PsycPRwf_2308 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 148652148 Common - tRNA(Ile)-lysidine synthetase PsycPRwf_0336 192 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 148654101 Common - Pirin domain protein domain protein PsycPRwf_2304 124 COG1741 COG1741, Pirin-related protein General function prediction only 148652366 Common - putative signal-transduction protein with CBS domains PsycPRwf_0554 73 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 148652695 Common - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family PsycPRwf_0888 184 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 148653133 Common - VRR-NUC PsycPRwf_1331 6 None None None 148653702 Common - radical SAM enzyme, Cfr family PsycPRwf_1905 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 148653154 Common - hypothetical protein PsycPRwf_1352 61 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148651924 Common - alpha/beta hydrolase fold PsycPRwf_0107 26 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148654184 Common trmE tRNA modification GTPase TrmE PsycPRwf_2387 220 COG0486 ThdF, Predicted GTPase General function prediction only 148652504 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_0693 180 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148652354 Common - hypothetical protein PsycPRwf_0542 51 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 148652887 Common - D-lactate dehydrogenase PsycPRwf_1080 35 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 148654056 Common upp uracil phosphoribosyltransferase PsycPRwf_2259 166 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 148651977 Nonpathogen - hypothetical protein PsycPRwf_0161 1 None None None 148653209 Common - hydrolase of the alpha/beta superfamily-like protein PsycPRwf_1407 78 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 148651853 Common - pseudouridine synthase PsycPRwf_0036 203 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 148653164 Common - Integrase, catalytic region PsycPRwf_1362 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652311 Common - Esterase/lipase-like protein PsycPRwf_0499 117 COG0657 Aes, Esterase/lipase Lipid metabolism 148652265 Common - protein of unknown function DUF462 PsycPRwf_0453 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 148653324 Common - extracellular solute-binding protein, family 5 PsycPRwf_1526 210 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 148652735 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase PsycPRwf_0928 228 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 148652192 Common - GTP-binding protein TypA PsycPRwf_0380 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 148652483 Nonpathogen - hypothetical protein PsycPRwf_0672 9 None None None 148652600 Common - protein of unknown function UPF0126 PsycPRwf_0791 133 COG2860 COG2860, Predicted membrane protein Function unknown 148653695 Common - Domain of unknown function DUF1853 PsycPRwf_1898 17 COG3782 COG3782, Uncharacterized protein conserved in bacteria Function unknown 148652199 Common - multi-sensor hybrid histidine kinase PsycPRwf_0387 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148653873 Common - extracellular solute-binding protein, family 3 PsycPRwf_2076 177 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 148653806 Common - Protein-disulfide isomerase-like protein PsycPRwf_2009 66 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 148652298 Common - translation elongation factor P PsycPRwf_0486 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 148652053 Common - asparagine synthase (glutamine-hydrolyzing) PsycPRwf_0241 149 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 148652730 Common - Ribonuclease H PsycPRwf_0923 218 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 148652871 Common - extracellular solute-binding protein, family 1 PsycPRwf_1064 138 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 148652598 Common - hypothetical protein PsycPRwf_0789 8 None None None 148652143 Common - Ppx/GppA phosphatase PsycPRwf_0331 180 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 148654185 Common - putative inner membrane protein translocase component YidC PsycPRwf_2388 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 148652499 Nonpathogen - hypothetical protein PsycPRwf_0688 1 None None None 148653556 Common engA GTP-binding protein EngA PsycPRwf_1759 233 COG1160 COG1160, Predicted GTPases General function prediction only 148652201 Common - drug resistance transporter, Bcr/CflA subfamily PsycPRwf_0389 215 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148653709 Common - putative transcriptional regulator, TetR family PsycPRwf_1912 38 COG1309 AcrR, Transcriptional regulator Transcription 148654139 Common - flavoprotein involved in K+ transport-like protein PsycPRwf_2342 52 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 148653690 Common - lipoprotein signal peptidase PsycPRwf_1893 107 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 148651851 Common - hydrolase of the alpha/beta-hydrolase fold-like protein PsycPRwf_0034 62 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 148654013 Common - protein of unknown function DUF962 PsycPRwf_2216 25 COG4539 COG4539, Predicted membrane protein Function unknown 148653521 Common - nitroreductase PsycPRwf_1724 95 COG0778 NfnB, Nitroreductase Energy production and conversion 148653194 Common - transposase, IS605 OrfB family PsycPRwf_1392 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652713 Common - 4-hydroxythreonine-4-phosphate dehydrogenase PsycPRwf_0906 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 148652546 Common - transcriptional regulator, LysR family PsycPRwf_0737 141 COG0583 LysR, Transcriptional regulator Transcription 148652431 Common - thioredoxin reductase PsycPRwf_0619 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 148653594 Common - putative membrane-associated zinc metalloprotease PsycPRwf_1797 211 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 148653927 Common - pantoate--beta-alanine ligase PsycPRwf_2130 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 148653827 Nonpathogen - hypothetical protein PsycPRwf_2030 1 None None None 148651876 Common - hypothetical protein PsycPRwf_0059 2 None None None 148652004 Common - ATP synthase F0, C subunit PsycPRwf_0188 135 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 148652861 Common - hypothetical protein PsycPRwf_1054 20 None None None 148652127 Common - carboxyl-terminal protease PsycPRwf_0315 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 148653083 Common - hypothetical protein PsycPRwf_1280 3 None None None 148652067 Common - alpha/beta hydrolase fold PsycPRwf_0255 3 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653980 Common - hypothetical protein PsycPRwf_2183 2 None None None 148653732 Common leuD isopropylmalate isomerase small subunit PsycPRwf_1935 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 148653830 Common - hypothetical protein PsycPRwf_2033 3 None None None 148654177 Common - Alcohol dehydrogenase, zinc-binding domain protein PsycPRwf_2380 186 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 148653036 Common - peptidase M14, carboxypeptidase A PsycPRwf_1231 27 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 148654083 Common - imidazoleglycerol phosphate synthase, cyclase subunit PsycPRwf_2286 216 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 148652318 Common - hypothetical protein PsycPRwf_0506 2 None None None 148654076 Common - protein of unknown function DUF81 PsycPRwf_2279 78 COG0730 COG0730, Predicted permeases General function prediction only 148653638 Common - Acyltransferase, WS/DGAT/MGAT PsycPRwf_1841 27 None None None 148653604 Common - protein of unknown function DUF815 PsycPRwf_1807 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 148652022 Common - transposase, IS605 OrfB family PsycPRwf_0206 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654094 Common - transcriptional regulator, LysR family PsycPRwf_2297 179 COG0583 LysR, Transcriptional regulator Transcription 148654045 Common - Patatin PsycPRwf_2248 85 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 148653243 Common - phosphoribosylglycinamide formyltransferase PsycPRwf_1441 221 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 148652154 Common - pantothenate kinase PsycPRwf_0342 76 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 148653259 Common prfA peptide chain release factor 1 PsycPRwf_1457 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 148654068 Common - rare lipoprotein A PsycPRwf_2271 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 148653012 Common - arsenite-activated ATPase ArsA PsycPRwf_1206 88 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 148652093 Common - amino acid carrier protein PsycPRwf_0281 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 148653279 Common - Integrase, catalytic region PsycPRwf_1478 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653445 Common - Indole-3-glycerol-phosphate synthase PsycPRwf_1648 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 148652274 Nonpathogen - hypothetical protein PsycPRwf_0462 1 None None None 148653091 Nonpathogen - hypothetical protein PsycPRwf_1288 1 None None None 148653787 Common - UBA/THIF-type NAD/FAD binding protein PsycPRwf_1990 127 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 148652745 Common - anion transporter PsycPRwf_0938 96 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 148652410 Common - LemA family protein PsycPRwf_0598 132 COG1704 LemA, Uncharacterized conserved protein Function unknown 148652851 Common - phosphoesterase, PA-phosphatase related PsycPRwf_1044 24 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 148654022 Common - urea amidolyase related protein PsycPRwf_2225 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 148653745 Common - membrane protein involved in aromatic hydrocarbon degradation PsycPRwf_1948 17 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 148653391 Common - Auxin Efflux Carrier PsycPRwf_1593 67 COG0679 COG0679, Predicted permeases General function prediction only 148653179 Common - Class I peptide chain release factor PsycPRwf_1377 110 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 148651854 Common - hypothetical protein PsycPRwf_0037 47 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 148652831 Common - Integrase, catalytic region PsycPRwf_1024 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653342 Nonpathogen - branched-chain amino acid transport PsycPRwf_1544 1 None None None 148653888 Common - peptidylprolyl isomerase, FKBP-type PsycPRwf_2091 122 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 148652109 Common - 3-hydroxyisobutyrate dehydrogenase PsycPRwf_0297 175 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 148653220 Nonpathogen - hypothetical protein PsycPRwf_1418 2 None None None 148654142 Common - N-acetyltransferase PsycPRwf_2345 42 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 148652303 Common - DNA repair protein RadC PsycPRwf_0491 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 148651823 Common - protein of unknown function DUF204 PsycPRwf_0006 63 COG1971 COG1971, Predicted membrane protein Function unknown 148653215 Common - phosphoserine aminotransferase PsycPRwf_1413 115 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 148654034 Common - ribonuclease R PsycPRwf_2237 202 COG0557 VacB, Exoribonuclease R Transcription 148653575 Nonpathogen - hypothetical protein PsycPRwf_1778 1 None None None 148652961 Common - Trp operon repressor PsycPRwf_1155 5 COG2973 TrpR, Trp operon repressor Transcription 148652237 Common rpsJ 30S ribosomal protein S10 PsycPRwf_0425 246 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 148652685 Common - ATPase AAA-2 domain protein PsycPRwf_0876 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 148652990 Common - L-carnitine dehydratase/bile acid-inducible protein F PsycPRwf_1184 114 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 148652100 Common - Thiopurine S-methyltransferase PsycPRwf_0288 29 None None None 148651834 Common - Alcohol dehydrogenase, zinc-binding domain protein PsycPRwf_0017 154 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 148654123 Common - OsmC family protein PsycPRwf_2326 87 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 148652467 Common - hypothetical protein PsycPRwf_0655 2 None None None 148654051 Common - phospholipid/glycerol acyltransferase PsycPRwf_2254 52 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 148653752 Common - putative transcriptional regulator PsycPRwf_1955 157 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 148652676 Common - protein of unknown function DUF558 PsycPRwf_0867 45 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 148653052 Common - 3-phosphoshikimate 1-carboxyvinyltransferase PsycPRwf_1248 232 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 148653399 Common obgE GTPase ObgE PsycPRwf_1601 249 COG0536 Obg, Predicted GTPase General function prediction only 148652628 Common - ATP-binding region, ATPase domain protein domain protein PsycPRwf_0819 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 148653766 Common - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family PsycPRwf_1969 135 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 148654171 Nonpathogen - hypothetical protein PsycPRwf_2374 1 None None None 148652623 Common - glutaminyl-tRNA synthetase PsycPRwf_0814 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 148652848 Common phhA phenylalanine 4-monooxygenase PsycPRwf_1041 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 148651839 Common - Alkaline phosphatase PsycPRwf_0022 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 148653070 Common - glycerophosphoryl diester phosphodiesterase PsycPRwf_1266 65 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 148653663 Common - phospholipid/glycerol acyltransferase PsycPRwf_1866 99 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 148651934 Common - transposase, IS605 OrfB family PsycPRwf_0117 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653287 Common - KWG Leptospira repeat protein PsycPRwf_1486 21 None None None 148653782 Common - PHP C-terminal domain protein PsycPRwf_1985 124 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 148652989 Common - AMP-dependent synthetase and ligase PsycPRwf_1183 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148653835 Common rplJ 50S ribosomal protein L10 PsycPRwf_2038 206 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 148651896 Common - stress protein PsycPRwf_0079 28 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 148652009 Common - F0F1 ATP synthase subunit beta PsycPRwf_0193 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 148653522 Common - glycine dehydrogenase PsycPRwf_1725 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 148653084 Common - hypothetical protein PsycPRwf_1281 4 None None None 148652495 Common - putative transcriptional regulator, XRE family PsycPRwf_0684 19 COG3655 COG3655, Predicted transcriptional regulator Transcription 148651862 Common - Disulphide bond formation protein DsbB PsycPRwf_0045 59 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 148652832 Common - transposase IS3/IS911 family protein PsycPRwf_1025 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652364 Common - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase PsycPRwf_0552 89 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 148653899 Common - Tetratricopeptide TPR_4 PsycPRwf_2102 27 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 148653356 Nonpathogen - hypothetical protein PsycPRwf_1558 2 None None None 148652287 Common - Endoribonuclease L-PSP PsycPRwf_0475 144 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 148653954 Common - putative CheW protein PsycPRwf_2157 67 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 148653901 Common - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase PsycPRwf_2104 180 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 148652807 Common - alpha/beta hydrolase fold PsycPRwf_1000 157 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148651985 Common rbgA ribosomal biogenesis GTPase PsycPRwf_0169 102 COG1161 COG1161, Predicted GTPases General function prediction only 148652656 Common - multiple antibiotic resistance (MarC)-related protein PsycPRwf_0847 155 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 148652544 Common - maleylacetoacetate isomerase PsycPRwf_0734 104 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652411 Common - protein of unknown function DUF477 PsycPRwf_0599 80 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 148653722 Common - GAF domain-containing protein-like protein PsycPRwf_1925 79 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 148653206 Common aceE pyruvate dehydrogenase subunit E1 PsycPRwf_1404 139 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 148651982 Common - Palmitoyl-CoA hydrolase PsycPRwf_0166 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 148652113 Common - methylmalonate-semialdehyde dehydrogenase PsycPRwf_0301 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652118 Common - ATP-dependent Clp protease, proteolytic subunit ClpP PsycPRwf_0306 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 148652776 Common - lipase chaperone PsycPRwf_0969 11 COG5380 LimK, Lipase chaperone Posttranslational modification, protein turnover, chaperones 148653541 Common - cytochrome c oxidase, cbb3-type, subunit I PsycPRwf_1744 138 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 148653795 Nonpathogen - protein of unknown function DUF503 PsycPRwf_1998 3 COG1550 COG1550, Uncharacterized protein conserved in bacteria Function unknown 148653962 Common - cytochrome c-type biogenesis protein CcmB PsycPRwf_2165 81 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 148653185 Common - hypothetical protein PsycPRwf_1383 3 None None None 148653814 Common - DNA mismatch repair protein PsycPRwf_2017 198 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 148652751 Common - orotidine 5'-phosphate decarboxylase PsycPRwf_0944 173 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 148651953 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase PsycPRwf_0136 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 148652027 Common - BolA family protein PsycPRwf_0211 86 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 148653818 Nonpathogen - hypothetical protein PsycPRwf_2021 1 None None None 148652967 Common - phenazine biosynthesis protein PhzF family PsycPRwf_1161 120 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 148653624 Common - phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II PsycPRwf_1827 201 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 148652243 Common rplV 50S ribosomal protein L22 PsycPRwf_0431 223 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 148654155 Common - cytochrome c, class I PsycPRwf_2358 28 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 148653711 Common - hydrolase, TatD family PsycPRwf_1914 236 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 148652649 Common - Cof-like hydrolase PsycPRwf_0840 89 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 148653909 Common - Serine-pyruvate aminotransferase/ aspartate aminotransferase-like protein PsycPRwf_2112 122 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 148652758 Common - soluble pyridine nucleotide transhydrogenase PsycPRwf_0951 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 148652494 Common - diaminopimelate dehydrogenase PsycPRwf_0683 16 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 148652959 Common - glutamine amidotransferase of anthranilate synthase PsycPRwf_1153 233 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 148652087 Common - UDP-glucose/GDP-mannose dehydrogenase, dimerisation PsycPRwf_0275 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 148652282 Common - Phosphoglycerate mutase PsycPRwf_0470 23 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 148653370 Common - pseudouridine synthase, RluA family PsycPRwf_1572 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 148652834 Common - transposase IS3/IS911 family protein PsycPRwf_1027 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653428 Common - scaffold protein PsycPRwf_1630 149 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 148653641 Common - Phosphoglycerate mutase PsycPRwf_1844 53 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 148653416 Common - protein of unknown function DUF1112 PsycPRwf_1618 26 COG4760 COG4760, Predicted membrane protein Function unknown 148652900 Common - Glutathione S-transferase, N-terminal domain PsycPRwf_1093 75 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652010 Common - ATP synthase F1, epsilon subunit PsycPRwf_0194 185 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 148653964 Common - Heme exporter protein D (CcmD) PsycPRwf_2167 2 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 148653227 Nonpathogen - hypothetical protein PsycPRwf_1425 1 None None None 148652793 Common - glycosyl transferase, family 25 PsycPRwf_0986 29 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 148652335 Common - hypothetical protein PsycPRwf_0523 19 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 148652308 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PsycPRwf_0496 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 148653484 Common - proton-translocating NADH-quinone oxidoreductase, chain N PsycPRwf_1687 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 148652352 Common - peptidase M22, glycoprotease PsycPRwf_0540 172 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 148652562 Common - Deoxyribodipyrimidine photo-lyase PsycPRwf_0753 134 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 148653139 Nonpathogen - hypothetical protein PsycPRwf_1337 1 None None None 148653759 Common - nicotinate-nucleotide pyrophosphorylase PsycPRwf_1962 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 148652035 Nonpathogen - Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein PsycPRwf_0219 1 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 148652740 Common - membrane protein-like protein PsycPRwf_0933 14 COG3671 COG3671, Predicted membrane protein Function unknown 148653358 Common - AAA ATPase PsycPRwf_1560 46 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 148653588 Common - aspartate-semialdehyde dehydrogenase PsycPRwf_1791 200 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 148652784 Common - DsrE family protein PsycPRwf_0977 36 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 148653266 Common - hypothetical protein PsycPRwf_1464 10 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653170 Common - Redoxin domain protein PsycPRwf_1368 81 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 148651968 Common - type II secretion system protein E PsycPRwf_0151 207 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 148653947 Common - septum site-determining protein MinD PsycPRwf_2150 160 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 148653519 Common gcvT glycine cleavage system aminomethyltransferase T PsycPRwf_1722 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 148652586 Common - TonB family protein PsycPRwf_0777 7 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 148652946 Common - protein tyrosine phosphatase PsycPRwf_1140 88 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 148653162 Common - hypothetical protein PsycPRwf_1360 15 None None None 148651884 Common - hypothetical protein PsycPRwf_0067 7 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 148651918 Common - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase PsycPRwf_0101 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 148652612 Common - periplasmic protein thiol--disulphide oxidoreductase DsbE PsycPRwf_0803 120 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 148652948 Common - MgtC/SapB transporter PsycPRwf_1142 117 COG1285 SapB, Uncharacterized membrane protein Function unknown 148652711 Common - Threonine aldolase PsycPRwf_0904 79 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 148653861 Common - Carbamoyl-phosphate synthase L chain, ATP-binding PsycPRwf_2064 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 148652729 Common - lipid-A-disaccharide synthase PsycPRwf_0922 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 148651993 Common - cell cycle protein PsycPRwf_0177 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 148653760 Common - hypothetical protein PsycPRwf_1963 67 COG4111 COG4111, Uncharacterized conserved protein General function prediction only 148653997 Common - membrane protein-like protein PsycPRwf_2200 15 COG1289 COG1289, Predicted membrane protein Function unknown 148653005 Common - aconitate hydratase PsycPRwf_1199 223 COG1048 AcnA, Aconitase A Energy production and conversion 148652421 Common - acetolactate synthase 3 catalytic subunit PsycPRwf_0609 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 148652523 Common - protein of unknown function DUF305 PsycPRwf_0712 20 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 148653616 Common - Fimbrial protein-like protein PsycPRwf_1819 19 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 148653792 Common - excinuclease ABC, A subunit PsycPRwf_1995 244 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 148653986 Nonpathogen - hypothetical protein PsycPRwf_2189 1 None None None 148653661 Common - peptidylprolyl isomerase, FKBP-type PsycPRwf_1864 136 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 148653023 Common - hypothetical protein PsycPRwf_1217 20 COG0753 KatE, Catalase Inorganic ion transport and metabolism 148652325 Common - hypothetical protein PsycPRwf_0513 19 None None None 148652371 Common tsf elongation factor Ts PsycPRwf_0559 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 148653829 Common - hypothetical protein PsycPRwf_2032 10 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 148653546 Common - Uncharacterized protein-like protein PsycPRwf_1749 11 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 148653653 Common pyrB aspartate carbamoyltransferase catalytic subunit PsycPRwf_1856 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 148654134 Common - apolipoprotein N-acyltransferase PsycPRwf_2337 166 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 148652383 Nonpathogen - hypothetical protein PsycPRwf_0571 1 None None None 148652389 Common - Guanylate kinase PsycPRwf_0577 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 148651935 Common - hypothetical protein PsycPRwf_0118 17 COG1289 COG1289, Predicted membrane protein Function unknown 148654074 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase PsycPRwf_2277 149 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 148652941 Common - sulfate ABC transporter, inner membrane subunit CysW PsycPRwf_1135 229 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 148653802 Common smpB SsrA-binding protein PsycPRwf_2005 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 148653299 Common - sugar efflux transporter PsycPRwf_1499 189 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148652607 Common rplM 50S ribosomal protein L13 PsycPRwf_0798 232 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 148652445 Common - hypothetical protein PsycPRwf_0633 13 None None None 148652471 Common - transport system permease protein PsycPRwf_0659 177 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 148652502 Common - cytochrome B561 PsycPRwf_0691 55 COG3658 COG3658, Cytochrome b Energy production and conversion 148652895 Common - transposase IS66 PsycPRwf_1088 63 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148651891 Common - C factor cell-cell signaling protein PsycPRwf_0074 80 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652516 Common - two component heavy metal response transcriptional regulator, winged helix family PsycPRwf_0705 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148652921 Common - protein of unknown function DUF45 PsycPRwf_1114 143 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 148652043 Common - UDP-glucose 4-epimerase PsycPRwf_0227 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 148653636 Common thiG thiazole synthase PsycPRwf_1839 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 148652866 Common - transposase IS66 PsycPRwf_1059 63 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653060 Nonpathogen - hypothetical protein PsycPRwf_1256 1 None None None 148653403 Nonpathogen - hypothetical protein PsycPRwf_1605 1 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 148653929 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase PsycPRwf_2132 201 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 148653300 Common - TonB-dependent siderophore receptor PsycPRwf_1500 99 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 148653936 Common - Peroxiredoxin PsycPRwf_2139 220 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 148653913 Common - DSBA oxidoreductase PsycPRwf_2116 66 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 148653851 Nonpathogen - hypothetical protein PsycPRwf_2054 1 None None None 148652402 Common - major facilitator superfamily MFS_1 PsycPRwf_0590 102 None None None 148652509 Common - protein of unknown function DUF125, transmembrane PsycPRwf_0698 65 COG1814 COG1814, Uncharacterized membrane protein Function unknown 148653075 Common - tRNA cytidylyltransferase PsycPRwf_1271 204 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 148652979 Common - transcriptional regulator, TetR family PsycPRwf_1173 58 COG1309 AcrR, Transcriptional regulator Transcription 148653920 Common - Saccharopine dehydrogenase (NAD(+), L-glutamate-forming) PsycPRwf_2123 45 COG3268 COG3268, Uncharacterized conserved protein Function unknown 148651829 Common - GCN5-related N-acetyltransferase PsycPRwf_0012 39 COG0456 RimI, Acetyltransferases General function prediction only 148652664 Common - protein of unknown function DUF395, YeeE/YedE PsycPRwf_0855 75 COG2391 COG2391, Predicted transporter component General function prediction only 148652820 Common - hypothetical protein PsycPRwf_1013 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 148652637 Common - phosphomethylpyrimidine kinase PsycPRwf_0828 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 148652984 Common - membrane protein-like protein PsycPRwf_1178 28 COG4852 COG4852, Predicted membrane protein Function unknown 148654018 Common - tyrosyl-tRNA synthetase PsycPRwf_2221 241 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148653832 Common - DNA-directed RNA polymerase subunit beta' PsycPRwf_2035 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 148653115 Common - hypothetical protein PsycPRwf_1313 25 None None None 148652060 Common - NAD-dependent epimerase/dehydratase PsycPRwf_0248 234 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 148651898 Common - hypothetical protein PsycPRwf_0081 13 None None None 148652390 Common - hydroxymethylbutenyl pyrophosphate reductase PsycPRwf_0578 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 148652747 Common secF preprotein translocase subunit SecF PsycPRwf_0940 215 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 148651900 Common - hypothetical protein PsycPRwf_0083 14 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 148652916 Common - Uncharacterized protein-like protein PsycPRwf_1109 43 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 148651942 Common - aminodeoxychorismate lyase PsycPRwf_0125 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 148652213 Common - 3-dehydroquinate synthase PsycPRwf_0401 207 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 148653700 Common - Uncharacterized protein-like protein PsycPRwf_1903 88 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 148652537 Nonpathogen - hypothetical protein PsycPRwf_0727 1 None None None 148654148 Nonpathogen - hypothetical protein PsycPRwf_2351 1 None None None 148653378 Common - 2-alkenal reductase PsycPRwf_1580 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 148652697 Common - Polyprenyl synthetase PsycPRwf_0890 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 148652341 Common - cell division protein FtsZ PsycPRwf_0529 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 148654182 Common - riboflavin biosynthesis protein RibD PsycPRwf_2385 224 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 148651959 Nonpathogen - hypothetical protein PsycPRwf_0142 1 None None None 148652156 Common - nicotinate (nicotinamide) nucleotide adenylyltransferase PsycPRwf_0344 152 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 148652768 Common - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PsycPRwf_0961 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 148653207 Nonpathogen - hypothetical protein PsycPRwf_1405 4 COG4719 COG4719, Uncharacterized protein conserved in bacteria Function unknown 148654107 Common rho transcription termination factor Rho PsycPRwf_2310 204 COG1158 Rho, Transcription termination factor Transcription 148653152 Nonpathogen - hypothetical protein PsycPRwf_1350 2 None None None 148653041 Common - hypothetical protein PsycPRwf_1237 12 None None None 148654170 Nonpathogen - hypothetical protein PsycPRwf_2373 2 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 148653361 Common - Delta 1-pyrroline-5-carboxylate dehydrogenase-like protein PsycPRwf_1563 45 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 148653775 Common - Na+/H+ antiporter NhaC PsycPRwf_1978 30 COG2056 COG2056, Predicted permease General function prediction only 148652970 Common - adenosylmethionine-8-amino-7-oxononanoate aminotransferase PsycPRwf_1164 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 148652829 Common - peptidase U32 PsycPRwf_1022 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 148652650 Nonpathogen - hypothetical protein PsycPRwf_0841 1 None None None 148652017 Common - 16S rRNA processing protein RimM PsycPRwf_0201 172 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 148651947 Common - protein of unknown function DUF45 PsycPRwf_0130 38 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 148653383 Common - protein of unknown function DUF21 PsycPRwf_1585 206 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 148653461 Common - Phosphopyruvate hydratase PsycPRwf_1664 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 148652379 Common - BLUF domain protein PsycPRwf_0567 29 None None None 148653467 Common - CTP synthetase PsycPRwf_1670 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 148653585 Common - hypothetical protein PsycPRwf_1788 30 None None None 148653238 Common - Peroxidase PsycPRwf_1436 217 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 148653069 Common - hypothetical protein PsycPRwf_1265 22 COG5373 COG5373, Predicted membrane protein Function unknown 148652469 Common - small multidrug resistance protein PsycPRwf_0657 131 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 148651860 Common - Transglycosylase-associated protein PsycPRwf_0043 38 COG2261 COG2261, Predicted membrane protein Function unknown 148653031 Common - hypothetical protein PsycPRwf_1226 3 None None None 148652574 Common - NnrS family protein PsycPRwf_0765 56 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 148651869 Common - DNA polymerase III chi subunit, HolC PsycPRwf_0052 20 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 148651874 Common - phosphoglycolate phosphatase PsycPRwf_0057 199 COG0546 Gph, Predicted phosphatases General function prediction only 148653535 Common - ComEC/Rec2-related protein PsycPRwf_1738 141 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 148651909 Common - ApbE family lipoprotein PsycPRwf_0092 126 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 148651861 Common - UDP-N-acetylmuramate PsycPRwf_0044 204 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 148652602 Common - Glutathione S-transferase, N-terminal domain PsycPRwf_0793 75 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148653819 Common - hypothetical protein PsycPRwf_2022 3 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 148653350 Common - nitrite reductase (NAD(P)H), large subunit PsycPRwf_1552 182 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 148653049 Nonpathogen - hypothetical protein PsycPRwf_1245 1 None None None 148653903 Common - 50S ribosomal protein L25/general stress protein Ctc PsycPRwf_2106 194 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 148653359 Common - hypothetical protein PsycPRwf_1561 2 None None None 148652987 Common - transcriptional regulator, LysR family PsycPRwf_1181 152 COG0583 LysR, Transcriptional regulator Transcription 148654113 Common - phenylalanyl-tRNA synthetase, alpha subunit PsycPRwf_2316 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 148653528 Common - 6-phosphogluconate dehydrogenase, NAD-binding PsycPRwf_1731 192 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 148652309 Common - protein of unknown function UPF0102 PsycPRwf_0497 119 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 148652300 Common - cytochrome c, class I PsycPRwf_0488 56 COG3474 COG3474, Cytochrome c2 Energy production and conversion 148652626 Common - 6-pyruvoyl-tetrahydropterin synthase-like protein PsycPRwf_0817 22 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 148652621 Common - UDP-2,3-diacylglucosamine hydrolase PsycPRwf_0812 69 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 148653114 Common - hypothetical protein PsycPRwf_1312 2 None None None 148653969 Common - protein of unknown function DUF454 PsycPRwf_2172 88 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 148653388 Common - uracil-DNA glycosylase PsycPRwf_1590 130 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 148651956 Common - tyrosine recombinase XerD PsycPRwf_0139 229 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 148653106 Nonpathogen - hypothetical protein PsycPRwf_1304 1 None None None 148652706 Common - lipoyl synthase PsycPRwf_0899 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 148654166 Common - OmpA domain protein transmembrane region-containing protein PsycPRwf_2369 6 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 148653856 Common - methionine biosynthesis protein MetW PsycPRwf_2059 67 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 148654005 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding PsycPRwf_2208 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 148653762 Common - L-aspartate oxidase PsycPRwf_1965 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 148652181 Common - Na+/H+ antiporter NhaA PsycPRwf_0369 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 148653470 Common - tRNA--hydroxylase PsycPRwf_1673 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 148652145 Common - putative cold-shock DNA-binding domain protein PsycPRwf_0333 176 COG1278 CspC, Cold shock proteins Transcription 148654054 Common - protein of unknown function DUF1289 PsycPRwf_2257 24 COG3313 COG3313, Predicted Fe-S protein General function prediction only 148651866 Common - heat shock protein DnaJ domain protein PsycPRwf_0049 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 148652760 Common - putative TIM-barrel protein, nifR3 family PsycPRwf_0953 205 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 148653458 Common - ribonuclease T PsycPRwf_1661 86 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 148652924 Common - transposase IS3/IS911 family protein PsycPRwf_1117 53 None None None 148654027 Common anmK anhydro-N-acetylmuramic acid kinase PsycPRwf_2230 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 148652748 Common secD preprotein translocase subunit SecD PsycPRwf_0941 212 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 148653798 Common - protein of unknown function DUF368 PsycPRwf_2001 50 COG2035 COG2035, Predicted membrane protein Function unknown 148653853 Nonpathogen - hypothetical protein PsycPRwf_2056 1 None None None 148653877 Common - sodium/glutamate symporter PsycPRwf_2080 53 COG0786 GltS, Na+/glutamate symporter Amino acid transport and metabolism 148653518 Common - protein of unknown function DUF709 PsycPRwf_1721 26 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 148653566 Common - dihydrolipoamide dehydrogenase PsycPRwf_1769 235 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 148651936 Common - shikimate 5-dehydrogenase PsycPRwf_0119 223 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 148652346 Common - ribosomal RNA methyltransferase RrmJ/FtsJ PsycPRwf_0534 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 148653127 Common - type III restriction enzyme, res subunit PsycPRwf_1325 129 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 148652105 Nonpathogen - hypothetical protein PsycPRwf_0293 1 None None None 148653769 Common - lytic murein transglycosylase PsycPRwf_1972 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 148651988 Common - Rh family protein/ammonium transporter PsycPRwf_0172 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 148652531 Common - transcriptional regulator, AraC family PsycPRwf_0720 146 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 148653627 Common - leucyl-tRNA synthetase PsycPRwf_1830 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652875 Common - hypothetical protein PsycPRwf_1068 4 None None None 148652240 Common rplW 50S ribosomal protein L23 PsycPRwf_0428 213 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 148652501 Common - Oxidoreductase FAD-binding domain protein PsycPRwf_0690 70 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 148652361 Common - N-acetylmuramoyl-L-alanine amidase, family 2 PsycPRwf_0549 107 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 148652074 Common - Succinate dehydrogenase, hydrophobic membrane anchor PsycPRwf_0262 52 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 148652663 Common - regulatory protein, ArsR PsycPRwf_0854 122 COG0640 ArsR, Predicted transcriptional regulators Transcription 148653424 Common - histone family protein DNA-binding protein PsycPRwf_1626 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 148652079 Common - 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase PsycPRwf_0267 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 148653187 Common - sodium/hydrogen exchanger PsycPRwf_1385 31 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 148653438 Common rpsR 30S ribosomal protein S18 PsycPRwf_1641 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 148653940 Common - periplasmic lipoprotein-like protein PsycPRwf_2143 13 COG3489 COG3489, Predicted periplasmic lipoprotein General function prediction only 148651899 Common - hypothetical protein PsycPRwf_0082 24 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 148651833 Nonpathogen - hypothetical protein PsycPRwf_0016 1 None None None 148653303 Common - TonB-dependent siderophore receptor PsycPRwf_1503 109 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 148652771 Nonpathogen - hypothetical protein PsycPRwf_0964 1 None None None 148652188 Common - DNA repair protein RecO PsycPRwf_0376 58 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 148652117 Common clpX ATP-dependent protease ATP-binding subunit PsycPRwf_0305 231 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 148653381 Common - Lytic transglycosylase, catalytic PsycPRwf_1583 161 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 148653777 Common - superoxide dismutase, copper/zinc binding PsycPRwf_1980 84 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 148653892 Common - phosphatidylserine decarboxylase PsycPRwf_2095 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 148652440 Common - GCN5-related N-acetyltransferase PsycPRwf_0628 89 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 148651822 Common - DNA gyrase, B subunit PsycPRwf_0005 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 148652427 Common - Electron transfer flavoprotein, alpha subunit-like protein PsycPRwf_0615 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 148653097 Nonpathogen - hypothetical protein PsycPRwf_1294 1 None None None 148651892 Common - stress protein PsycPRwf_0075 31 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 148652842 Common - aminoacyl-histidine dipeptidase PsycPRwf_1035 58 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 148651976 Common - ThiJ/PfpI domain protein PsycPRwf_0160 167 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 148652215 Common gltB glutamate synthase subunit alpha PsycPRwf_0403 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 148651914 Common - Na(+)-translocating NADH-quinone reductase subunit D PsycPRwf_0097 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 148653578 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA PsycPRwf_1781 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 148653446 Common - Smr protein/MutS2 PsycPRwf_1649 81 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 148653504 Common - Citrate transporter PsycPRwf_1707 56 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 148653085 Common - hypothetical protein PsycPRwf_1282 3 None None None 148653862 Common - glutathione-dependent formaldehyde-activating, GFA PsycPRwf_2065 36 COG3791 COG3791, Uncharacterized conserved protein Function unknown 148652917 Common - nitrite and sulphite reductase 4Fe-4S region PsycPRwf_1110 168 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 148653789 Common - single-strand binding protein PsycPRwf_1992 212 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 148652280 Common - ZipA, C-terminal FtsZ-binding region PsycPRwf_0468 32 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 148653273 Common - Integrase, catalytic region PsycPRwf_1472 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652178 Common - sodium:dicarboxylate symporter PsycPRwf_0366 164 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 148652423 Common - ketol-acid reductoisomerase PsycPRwf_0611 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 148652065 Common - polysaccharide export protein PsycPRwf_0253 110 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 148653791 Nonpathogen - hypothetical protein PsycPRwf_1994 1 None None None 148653950 Nonpathogen - hypothetical protein PsycPRwf_2153 1 None None None 148651991 Common - sulphate transporter PsycPRwf_0175 169 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 148652163 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PsycPRwf_0351 141 COG0388 COG0388, Predicted amidohydrolase General function prediction only 148653635 Common - Peptidoglycan-binding LysM PsycPRwf_1838 78 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 148653047 Common - RNA methyltransferase, TrmH family, group 1 PsycPRwf_1243 155 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 148653499 Common - ATPase involved in chromosome partitioning-like protein PsycPRwf_1702 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 148653034 Common - transposase IS3/IS911 family protein PsycPRwf_1229 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652686 Common - choline/carnitine/betaine transporter PsycPRwf_0877 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 148652515 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_0704 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148652070 Common - hypothetical protein PsycPRwf_0258 12 None None None 148652577 Common - 3-dehydroquinate dehydratase PsycPRwf_0768 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 148653180 Common - aldehyde dehydrogenase PsycPRwf_1378 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652910 Common - periplasmic binding protein PsycPRwf_1103 36 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 148652492 Common - polar amino acid ABC transporter, inner membrane subunit PsycPRwf_0681 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 148653991 Common - DNA topoisomerase IV subunit A PsycPRwf_2194 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 148654088 Common - SEC-C motif domain protein PsycPRwf_2291 71 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 148653249 Common - transcriptional regulator, LysR family PsycPRwf_1447 102 COG0583 LysR, Transcriptional regulator Transcription 148652877 Common - transposase, IS605 OrfB family PsycPRwf_1070 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653553 Common - peptidase M23B PsycPRwf_1756 187 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 148652051 Nonpathogen - hypothetical protein PsycPRwf_0236 1 None None None 148652823 Common - protein of unknown function DUF1275 PsycPRwf_1016 26 COG3619 COG3619, Predicted membrane protein Function unknown 148652397 Nonpathogen - hypothetical protein PsycPRwf_0585 1 None None None 148654024 Common - branched-chain amino acid transport system II carrier protein PsycPRwf_2227 59 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 148653090 Common - hypothetical protein PsycPRwf_1287 2 None None None 148652993 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_1187 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148652734 Common - ErfK/YbiS/YcfS/YnhG family protein PsycPRwf_0927 30 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 148653397 Common - uroporphyrinogen decarboxylase PsycPRwf_1599 179 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 148653196 Common - tetraacyldisaccharide 4'-kinase PsycPRwf_1394 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 148652548 Common - maleylacetoacetate isomerase PsycPRwf_0739 111 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652150 Common - protein of unknown function YGGT PsycPRwf_0338 23 COG0762 COG0762, Predicted integral membrane protein Function unknown 148652193 Common - large conductance mechanosensitive channel protein PsycPRwf_0381 136 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148653693 Common - conserved hypothetical protein 730 PsycPRwf_1896 136 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 148652055 Common - polysaccharide biosynthesis protein PsycPRwf_0243 69 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 148653333 Common - L-carnitine dehydratase/bile acid-inducible protein F PsycPRwf_1535 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 148651962 Common - DNA repair protein RecN PsycPRwf_0145 202 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 148653237 Common - Glutathione S-transferase, N-terminal domain PsycPRwf_1435 53 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148652080 Common - dihydrolipoamide dehydrogenase PsycPRwf_0268 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 148653019 Common - Exonuclease V gamma subunit-like protein PsycPRwf_1213 61 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 148653809 Common - PRC-barrel domain protein PsycPRwf_2012 18 COG3861 COG3861, Uncharacterized protein conserved in bacteria Function unknown 148652590 Common - ornithine carbamoyltransferase PsycPRwf_0781 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 148653703 Common - Nucleoside-diphosphate kinase PsycPRwf_1906 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 148652700 Common - outer membrane lipoprotein carrier protein LolA PsycPRwf_0893 80 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 148652529 Nonpathogen - hypothetical protein PsycPRwf_0718 1 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 148652741 Common - dihydroorotate dehydrogenase 2 PsycPRwf_0934 235 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 148652847 Common - 4-hydroxyphenylpyruvate dioxygenase PsycPRwf_1040 78 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 148651967 Common - type II secretion system protein PsycPRwf_0150 143 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 148653746 Common - hypothetical protein PsycPRwf_1949 6 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 148652719 Common - acyl-CoA dehydrogenase domain protein PsycPRwf_0912 148 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 148653242 Common - phosphoribosylaminoimidazole synthetase PsycPRwf_1440 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 148653507 Common - transposase, IS605 OrfB family PsycPRwf_1710 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654095 Common - DoxX family protein PsycPRwf_2298 63 COG2259 COG2259, Predicted membrane protein Function unknown 148653735 Common - IS1 transposase PsycPRwf_1938 21 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 148654154 Common - L-amino-acid oxidase PsycPRwf_2357 29 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 148652828 Common - protein of unknown function DUF218 PsycPRwf_1021 73 COG1434 COG1434, Uncharacterized conserved protein Function unknown 148652089 Common - competence protein ComEA helix-hairpin-helix repeat protein PsycPRwf_0277 91 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 148654047 Common - N-acetylglutamate synthase PsycPRwf_2250 198 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 148652296 Nonpathogen - hypothetical protein PsycPRwf_0484 1 None None None 148652260 Common - 30S ribosomal protein S11 PsycPRwf_0448 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 148653921 Common - dihydrodipicolinate synthase PsycPRwf_2124 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 148652121 Common - Superoxide dismutase PsycPRwf_0309 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 148652133 Common - aminomethyltransferase related to GcvT-like protein PsycPRwf_0321 77 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 148654130 Common - phospholipase D/Transphosphatidylase PsycPRwf_2333 143 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 148652457 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase PsycPRwf_0645 147 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 148653414 Common - protein of unknown function DUF1315 PsycPRwf_1616 25 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 148651948 Common gltX glutamyl-tRNA synthetase PsycPRwf_0131 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 148653379 Common - protein of unknown function DUF34 PsycPRwf_1581 109 COG0327 COG0327, Uncharacterized conserved protein Function unknown 148652267 Common rpmF 50S ribosomal protein L32 PsycPRwf_0455 17 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 148652289 Common - von Willebrand factor, type A PsycPRwf_0477 65 COG2304 COG2304, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 148653240 Common - ATPase involved in DNA replication initiation-like protein PsycPRwf_1438 71 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 148653633 Common - Catalase PsycPRwf_1836 126 COG0753 KatE, Catalase Inorganic ion transport and metabolism 148652155 Common - iojap-like protein PsycPRwf_0343 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 148653444 Common trpD anthranilate phosphoribosyltransferase PsycPRwf_1647 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 148653289 Common - isochorismatase hydrolase PsycPRwf_1488 108 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 148653671 Common - Lytic transglycosylase, catalytic PsycPRwf_1874 155 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 148652858 Common - hypothetical protein PsycPRwf_1051 73 None None None 148652015 Common - integral membrane sensor signal transduction histidine kinase PsycPRwf_0199 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 148653922 Common - hypothetical protein PsycPRwf_2125 2 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 148653600 Common - MiaB-like tRNA modifying enzyme YliG PsycPRwf_1803 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 148652090 Common - hypothetical protein PsycPRwf_0278 10 None None None 148653153 Common - hypothetical protein PsycPRwf_1351 4 None None None 148654109 Common - protein of unknown function, zinc metallopeptidase putative PsycPRwf_2312 86 COG2321 COG2321, Predicted metalloprotease General function prediction only 148653406 Common - major facilitator superfamily MFS_1 PsycPRwf_1608 85 None None None 148652413 Common - Silent information regulator protein Sir2 PsycPRwf_0601 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 148652864 Common - transposase IS3/IS911 family protein PsycPRwf_1057 9 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652815 Common - molybdopterin dehydrogenase, FAD-binding PsycPRwf_1008 78 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 148652681 Common - Methyltransferase type 11 PsycPRwf_0872 29 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 148653675 Common - Uncharacterized protein-like protein PsycPRwf_1878 4 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 148654180 Common - methionyl-tRNA formyltransferase PsycPRwf_2383 221 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 148652657 Common - imidazolonepropionase PsycPRwf_0848 106 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 148653984 Common - biotin synthase PsycPRwf_2187 176 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 148652266 Nonpathogen - protein of unknown function DUF177 PsycPRwf_0454 1 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 148653117 Common - Integrase, catalytic region PsycPRwf_1315 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652506 Nonpathogen - hypothetical protein PsycPRwf_0695 1 None None None 148652791 Common - Capsular polysaccharide synthesis PsycPRwf_0984 5 COG3774 OCH1, Mannosyltransferase OCH1 and related enzymes Cell envelope biogenesis, outer membrane 148652222 Common - GTP cyclohydrolase II PsycPRwf_0410 179 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 148652119 Common tig trigger factor PsycPRwf_0307 216 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 148653533 Common - hypothetical protein PsycPRwf_1736 27 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653619 Common - delta-aminolevulinic acid dehydratase PsycPRwf_1822 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 148654093 Common - iron-containing alcohol dehydrogenase PsycPRwf_2296 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 148652581 Common - cytochrome oxidase maturation protein, cbb3-type PsycPRwf_0772 11 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 148653293 Common - transposase IS3/IS911 family protein PsycPRwf_1493 53 None None None 148652798 Common aspS aspartyl-tRNA synthetase PsycPRwf_0991 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148653008 Common - GCN5-related N-acetyltransferase PsycPRwf_1202 89 COG2153 ElaA, Predicted acyltransferase General function prediction only 148652690 Common - electron transport complex, RnfABCDGE type, B subunit PsycPRwf_0881 105 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 148652660 Common - nucleoside recognition domain protein PsycPRwf_0851 23 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 148652350 Nonpathogen - hypothetical protein PsycPRwf_0538 1 None None None 148654036 Common - hypothetical protein PsycPRwf_2239 26 None None None 148654016 Common - protein of unknown function DUF1653 PsycPRwf_2219 35 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 148652031 Common - cytoplasmic chaperone TorD family protein PsycPRwf_0215 23 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 148653158 Common - Integrase, catalytic region PsycPRwf_1356 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653595 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase PsycPRwf_1798 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 148652882 Common - phosphoesterase, PA-phosphatase related PsycPRwf_1075 99 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 148652333 Common pyrE orotate phosphoribosyltransferase PsycPRwf_0521 139 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 148651848 Common - MATE efflux family protein PsycPRwf_0031 174 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 148652619 Common - ribosome small subunit-dependent GTPase A PsycPRwf_0810 163 COG1162 COG1162, Predicted GTPases General function prediction only 148652477 Common - nitrite transporter PsycPRwf_0665 88 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 148651840 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_0023 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 148652231 Common - glutamyl-tRNA(Gln) amidotransferase, C subunit PsycPRwf_0419 102 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 148653953 Common - methyl-accepting chemotaxis sensory transducer PsycPRwf_2156 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 148653062 Common - exonuclease III PsycPRwf_1258 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 148652588 Common - ribose-5-phosphate isomerase A PsycPRwf_0779 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 148653887 Common - peptidase M61 domain protein PsycPRwf_2090 56 COG3975 COG3975, Predicted protease with the C-terminal PDZ domain General function prediction only 148652932 Common - phage integrase family protein PsycPRwf_1126 87 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 148652634 Common - Cell envelope biogenesis YhbN PsycPRwf_0825 58 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 148652599 Common - single-stranded-DNA-specific exonuclease RecJ PsycPRwf_0790 195 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 148653978 Common - hypothetical protein PsycPRwf_2181 6 None None None 148653971 Common - branched-chain amino acid transport system II carrier protein PsycPRwf_2174 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 148652570 Common - type I secretion membrane fusion protein, HlyD family PsycPRwf_0761 139 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 148653377 Common - ferredoxin PsycPRwf_1579 30 COG0633 Fdx, Ferredoxin Energy production and conversion 148653003 Common prpB 2-methylisocitrate lyase PsycPRwf_1197 135 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 148652408 Common - beta-Ig-H3/fasciclin PsycPRwf_0596 56 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 148653331 Common - succinic semialdehyde dehydrogenase PsycPRwf_1533 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652973 Common - putative outer membrane adhesin like proteiin PsycPRwf_1167 133 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 148652327 Nonpathogen - hypothetical protein PsycPRwf_0515 1 None None None 148652443 Common - flavodoxin/nitric oxide synthase PsycPRwf_0631 92 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 148653992 Common - protein of unknown function DUF1311 PsycPRwf_2195 34 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 148653686 Common - cytochrome c, class I PsycPRwf_1889 61 COG2863 COG2863, Cytochrome c553 Energy production and conversion 148653422 Common - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PsycPRwf_1624 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 148653650 Common - lipolytic enzyme, G-D-S-L family PsycPRwf_1853 26 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 148651872 Common - permease YjgP/YjgQ family protein PsycPRwf_0055 69 COG0795 COG0795, Predicted permeases General function prediction only 148652912 Common - major facilitator superfamily MFS_1 PsycPRwf_1105 185 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148652254 Common rplR 50S ribosomal protein L18 PsycPRwf_0442 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 148652525 Common - twin-arginine translocation protein, TatA/E family subunit PsycPRwf_0714 58 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 148653910 Common - bacterioferritin PsycPRwf_2113 101 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 148651919 Common - MscS Mechanosensitive ion channel PsycPRwf_0102 164 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 148651945 Common - protease Do PsycPRwf_0128 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 148652020 Common - hypothetical protein PsycPRwf_0204 9 None None None 148652373 Common - Phosphoenolpyruvate carboxylase PsycPRwf_0561 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 148652782 Nonpathogen - hypothetical protein PsycPRwf_0975 1 None None None 148652906 Common - SMC domain protein PsycPRwf_1099 115 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 148652944 Common - regulatory protein, ArsR PsycPRwf_1138 140 COG0640 ArsR, Predicted transcriptional regulators Transcription 148652461 Common - protein of unknown function DUF938 PsycPRwf_0649 49 None None None 148652033 Common moaA molybdenum cofactor biosynthesis protein A PsycPRwf_0217 196 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 148652756 Common - phosphoenolpyruvate synthase PsycPRwf_0949 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 148652385 Common - primosomal protein N' PsycPRwf_0573 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 148653583 Common - rod shape-determining protein RodA PsycPRwf_1786 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 148651912 Common - Na(+)-translocating NADH-quinone reductase subunit F PsycPRwf_0095 157 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 148653173 Common - Gluconate transporter PsycPRwf_1371 79 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 148653894 Common - isochorismatase hydrolase PsycPRwf_2097 55 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 148652837 Common - conserved hypothetical protein 698 PsycPRwf_1030 118 COG2855 COG2855, Predicted membrane protein Function unknown 148653502 Common - 3-oxoacid CoA-transferase, B subunit PsycPRwf_1705 94 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 148652317 Common - Anthranilate synthase component I and chorismate binding protein PsycPRwf_0505 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 148653216 Nonpathogen - hypothetical protein PsycPRwf_1414 1 None None None 148651928 Nonpathogen - hypothetical protein PsycPRwf_0111 1 None None None 148652610 Common - hypothetical protein PsycPRwf_0801 15 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 148651903 Common - ABC transporter related PsycPRwf_0086 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 148652996 Nonpathogen - hypothetical protein PsycPRwf_1190 1 None None None 148653270 Common - transposase IS3/IS911 family protein PsycPRwf_1469 69 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653021 Common - PpiC-type peptidyl-prolyl cis-trans isomerase PsycPRwf_1215 134 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 148652551 Common - aldehyde dehydrogenase PsycPRwf_0742 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652568 Common - outer membrane efflux protein PsycPRwf_0759 48 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 148652604 Common - Cytochrome b/b6, N-terminal domain PsycPRwf_0795 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 148652099 Common - Aldose 1-epimerase PsycPRwf_0287 53 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 148653826 Nonpathogen - hypothetical protein PsycPRwf_2029 1 None None None 148653648 Common - nicotinamide-nucleotide adenylyltransferase PsycPRwf_1851 120 COG1056 NadR, Nicotinamide mononucleotide adenylyltransferase Coenzyme metabolism 148652359 Common - hypothetical protein PsycPRwf_0547 14 None None None 148653143 Nonpathogen - hypothetical protein PsycPRwf_1341 2 None None None 148652451 Common groES co-chaperonin GroES PsycPRwf_0639 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 148652110 Common - Enoyl-CoA hydratase/isomerase PsycPRwf_0298 129 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148652561 Nonpathogen - hypothetical protein PsycPRwf_0752 6 None None None 148652981 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_1175 216 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 148653258 Common lysS lysyl-tRNA synthetase PsycPRwf_1456 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 148653617 Nonpathogen - hypothetical protein PsycPRwf_1820 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 148653260 Common - 3-oxoacyl-(acyl carrier protein) synthase III PsycPRwf_1458 197 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 148653236 Common - hypothetical protein PsycPRwf_1434 7 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 148652538 Nonpathogen - hypothetical protein PsycPRwf_0728 1 None None None 148653476 Common - monofunctional biosynthetic peptidoglycan transglycosylase PsycPRwf_1679 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 148652954 Common - DSBA oxidoreductase PsycPRwf_1148 84 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 148651970 Nonpathogen secG preprotein translocase subunit SecG PsycPRwf_0153 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 148652956 Common - extracellular solute-binding protein, family 3 PsycPRwf_1150 173 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 148653684 Common - protein of unknown function UPF0125 PsycPRwf_1887 11 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 148652644 Common - phosphoesterase, PA-phosphatase related PsycPRwf_0835 30 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 148653205 Common - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase PsycPRwf_1403 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 148653807 Common - homoserine dehydrogenase PsycPRwf_2010 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 148652722 Common - S-adenosyl-L-homocysteine hydrolase PsycPRwf_0915 178 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 148653874 Common - ABC transporter related PsycPRwf_2077 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 148653858 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PsycPRwf_2061 205 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 148652433 Common - Pirin domain protein domain protein PsycPRwf_0621 143 COG1741 COG1741, Pirin-related protein General function prediction only 148651902 Common - Citrate lyase beta subunit-like protein PsycPRwf_0085 24 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 148651921 Nonpathogen - hypothetical protein PsycPRwf_0104 1 None None None 148652896 Common - IS66 Orf2 family protein PsycPRwf_1089 23 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653492 Common - NADH-quinone oxidoreductase, F subunit PsycPRwf_1695 159 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 148653938 Common - protein of unknown function DUF45 PsycPRwf_2141 132 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 148653433 Common - histidine triad (HIT) protein PsycPRwf_1635 65 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 148653486 Common - NADH dehydrogenase subunit L PsycPRwf_1689 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 148653949 Common - cytochrome B561 PsycPRwf_2152 91 COG3038 CybB, Cytochrome B561 Energy production and conversion 148652348 Common - dihydropteroate synthase PsycPRwf_0536 219 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 148653881 Common - Chorismate lyase PsycPRwf_2084 24 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 148651964 Common - RNA methyltransferase, TrmH family, group 3 PsycPRwf_0147 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 148652291 Common - ribonuclease, Rne/Rng family PsycPRwf_0479 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 148652338 Common - D-alanine--D-alanine ligase PsycPRwf_0526 211 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 148653919 Common - RNA binding S1 domain protein PsycPRwf_2122 208 COG2183 Tex, Transcriptional accessory protein Transcription 148652200 Common - enoyl-CoA hydratase PsycPRwf_0388 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148652368 Common - metal dependent phosphohydrolase PsycPRwf_0556 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 148652321 Common - hypothetical protein PsycPRwf_0509 43 None None None 148652873 Common - Exonuclease, RNase T and DNA polymerase III PsycPRwf_1066 21 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 148653095 Common - hypothetical protein PsycPRwf_1292 2 None None None 148654020 Common - acetyl-CoA carboxylase, biotin carboxylase PsycPRwf_2223 237 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 148653839 Common secE preprotein translocase subunit SecE PsycPRwf_2042 55 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 148653189 Common - hypothetical protein PsycPRwf_1387 10 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 148653539 Nonpathogen - hypothetical protein PsycPRwf_1742 1 None None None 148651938 Common - Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein PsycPRwf_0121 61 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 148653267 Common - hypothetical protein PsycPRwf_1466 8 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 148653182 Common - lipoate-protein ligase B PsycPRwf_1380 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 148652242 Common rpsS 30S ribosomal protein S19 PsycPRwf_0430 246 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 148653319 Common - TonB-dependent heme/hemoglobin receptor family protein PsycPRwf_1519 100 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 148652845 Common - fumarylacetoacetase PsycPRwf_1038 52 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 148652855 Common - sulfatase PsycPRwf_1048 62 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 148652077 Common - IS1 transposase PsycPRwf_0265 21 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 148653516 Common - AAA ATPase, central domain protein PsycPRwf_1719 100 COG0714 COG0714, MoxR-like ATPases General function prediction only 148651915 Common - Na(+)-translocating NADH-quinone reductase subunit C PsycPRwf_0098 45 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 148652962 Nonpathogen - hypothetical protein PsycPRwf_1156 1 None None None 148653530 Common - major facilitator superfamily MFS_1 PsycPRwf_1733 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148652840 Common - transcriptional regulator, LysR family PsycPRwf_1033 182 COG0583 LysR, Transcriptional regulator Transcription 148653509 Common - protein of unknown function DUF534 PsycPRwf_1712 58 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 148652344 Common - hypothetical protein PsycPRwf_0532 8 None None None 148652115 Common - major facilitator superfamily MFS_1 PsycPRwf_0303 183 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148653488 Common - NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 PsycPRwf_1691 152 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 148653427 Common - cysteine desulfurase IscS PsycPRwf_1629 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 148653056 Common - adenine phosphoribosyltransferase PsycPRwf_1252 165 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 148653931 Common - Rhomboid family protein PsycPRwf_2134 32 None None None 148653526 Common - conserved hypothetical protein 103 PsycPRwf_1729 37 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 148652307 Common - HhH-GPD family protein PsycPRwf_0495 104 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 148653010 Common - Sterol desaturase-like protein PsycPRwf_1204 74 COG3000 ERG3, Sterol desaturase Lipid metabolism 148652107 Common - Sporulation domain protein PsycPRwf_0295 10 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 148651824 Common - putative SAM-dependent methyltransferase PsycPRwf_0007 28 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 148651997 Common - Calcineurin phosphoesterase C-terminal domain protein PsycPRwf_0181 64 COG1409 Icc, Predicted phosphohydrolases General function prediction only 148653448 Common - TonB-dependent receptor PsycPRwf_1651 128 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 148653864 Common - Propionyl-CoA carboxylase PsycPRwf_2067 145 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 148652926 Common - transposase IS3/IS911 family protein PsycPRwf_1119 56 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653112 Nonpathogen - hypothetical protein PsycPRwf_1310 1 None None None 148653579 Common - peptidase M16 domain protein PsycPRwf_1782 200 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 148652765 Common - Cupin 4 family protein PsycPRwf_0958 57 COG2850 COG2850, Uncharacterized conserved protein Function unknown 148652597 Common - phosphate transporter PsycPRwf_0788 170 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 148654111 Common - histone family protein DNA-binding protein PsycPRwf_2314 207 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 148653352 Common - excinuclease ABC subunit B PsycPRwf_1554 228 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 148653160 Common - Integrase, catalytic region PsycPRwf_1358 141 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654029 Common - sulphate transporter PsycPRwf_2232 156 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 148652803 Nonpathogen - hypothetical protein PsycPRwf_0996 1 None None None 148653932 Common - 5'-nucleotidase PsycPRwf_2135 30 None None None 148651958 Common - transposase, IS605 OrfB family PsycPRwf_0141 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148654110 Nonpathogen - hypothetical protein PsycPRwf_2313 1 None None None 148652942 Common - sulfate ABC transporter, ATPase subunit PsycPRwf_1136 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 148652716 Common - short-chain dehydrogenase/reductase SDR PsycPRwf_0909 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148651886 Common - Cholesterol oxidase PsycPRwf_0069 33 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 148652283 Common - aminoglycoside phosphotransferase PsycPRwf_0471 59 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 148653317 Common - protein of unknown function DUF305 PsycPRwf_1517 51 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 148653905 Common - aspartate alpha-decarboxylase PsycPRwf_2108 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 148653472 Common - transposase, IS4 family protein PsycPRwf_1675 77 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653108 Nonpathogen - hypothetical protein PsycPRwf_1306 1 None None None 148654000 Common - metallophosphoesterase PsycPRwf_2203 25 None None None 148654152 Common - Formate--tetrahydrofolate ligase PsycPRwf_2355 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 148653363 Common - Xanthine/uracil/vitamin C permease PsycPRwf_1565 139 COG2252 COG2252, Permeases General function prediction only 148654003 Common - protein of unknown function DUF188 PsycPRwf_2206 96 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 148652931 Common - phage integrase family protein PsycPRwf_1125 16 None None None 148653778 Common recA recombinase A PsycPRwf_1981 227 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 148653847 Common - transposase, mutator type PsycPRwf_2050 89 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652513 Common - transposase, IS4 family protein PsycPRwf_0702 26 None None None 148653749 Common - Triacylglycerol lipase PsycPRwf_1952 91 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 148653823 Common - Phospholipase A(1) PsycPRwf_2026 52 COG2829 PldA, Outer membrane phospholipase A Cell envelope biogenesis, outer membrane 148653386 Common - cytidylate kinase PsycPRwf_1588 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 148653727 Common - Asparaginase/glutaminase PsycPRwf_1930 49 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 148653224 Common - protein of unknown function DUF329 PsycPRwf_1422 61 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 148652331 Common - NAD-dependent epimerase/dehydratase PsycPRwf_0519 58 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 148653145 Common - Na+/H+ antiporter NhaC PsycPRwf_1343 30 COG2056 COG2056, Predicted permease General function prediction only 148653728 Common truA tRNA pseudouridine synthase A PsycPRwf_1931 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 148652808 Common - signal recognition particle-docking protein FtsY PsycPRwf_1001 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 148651943 Common - dTMP kinase PsycPRwf_0126 224 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 148653599 Common - uridylate kinase PsycPRwf_1802 237 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 148652673 Common - Topoisomerase IB-like protein PsycPRwf_0864 45 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 148653169 Common - putative outer membrane adhesin like proteiin PsycPRwf_1367 130 None None None 148653810 Nonpathogen - hypothetical protein PsycPRwf_2013 1 None None None 148653705 Common - periplasmic protein-like protein PsycPRwf_1908 22 COG3698 COG3698, Predicted periplasmic protein Function unknown 148653620 Common - OmpW family protein PsycPRwf_1823 70 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 148652186 Common - Ribonuclease III PsycPRwf_0374 215 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 148652177 Common - transcriptional regulator, LysR family PsycPRwf_0365 159 COG0583 LysR, Transcriptional regulator Transcription 148653737 Common - hypothetical protein PsycPRwf_1940 14 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 148652919 Nonpathogen - hypothetical protein PsycPRwf_1112 1 None None None 148652893 Common - OmpA/MotB domain protein PsycPRwf_1086 169 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148652294 Common ubiA prenyltransferase PsycPRwf_0482 180 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 148653544 Common - cytochrome c, class I PsycPRwf_1747 76 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 148653754 Common - RNA-binding S4 domain protein PsycPRwf_1957 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 148654097 Common - protein of unknown function DUF1275 PsycPRwf_2300 21 COG3619 COG3619, Predicted membrane protein Function unknown 148653738 Common - hypothetical protein PsycPRwf_1941 3 None None None 148651969 Common - Triose-phosphate isomerase PsycPRwf_0152 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 148653841 Common - FHA domain containing protein PsycPRwf_2044 24 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 148653622 Common - magnesium transporter PsycPRwf_1825 163 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 148652146 Common - oxidoreductase alpha (molybdopterin) subunit PsycPRwf_0334 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 148653338 Common - hypothetical protein PsycPRwf_1540 2 None None None 148652131 Common - two component transcriptional regulator, winged helix family PsycPRwf_0319 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148653960 Nonpathogen - hypothetical protein PsycPRwf_2163 1 None None None 148653029 Nonpathogen - hypothetical protein PsycPRwf_1224 1 None None None 148652262 Common - DNA-directed RNA polymerase subunit alpha PsycPRwf_0450 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 148653190 Common - MaoC domain protein dehydratase PsycPRwf_1388 25 COG2030 MaoC, Acyl dehydratase Lipid metabolism 148653401 Common - Lipocalin family protein PsycPRwf_1603 73 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 148653967 Common - putative cold-shock DNA-binding domain protein PsycPRwf_2170 176 COG1278 CspC, Cold shock proteins Transcription 148654049 Common - Conserved TM helix repeat-containing protein PsycPRwf_2252 29 None None None 148652123 Common - Glutamyl-tRNA reductase PsycPRwf_0311 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 148653148 Nonpathogen - hypothetical protein PsycPRwf_1346 1 None None None 148653957 Common - two component transcriptional regulator, winged helix family PsycPRwf_2160 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 148654131 Common - peptidase M24 PsycPRwf_2334 173 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 148653345 Common - uroporphyrin-III C-methyltransferase PsycPRwf_1547 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 148653606 Common - MaoC domain protein dehydratase PsycPRwf_1809 68 COG2030 MaoC, Acyl dehydratase Lipid metabolism 148652436 Common - acetate--CoA ligase PsycPRwf_0624 216 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 148653866 Common - Hsp33 protein PsycPRwf_2069 130 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 148652455 Common - 2OG-Fe(II) oxygenase PsycPRwf_0643 30 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 148653800 Common - hypothetical protein PsycPRwf_2003 26 COG3610 COG3610, Uncharacterized conserved protein Function unknown 148654041 Common - transcriptional coactivator/pterin dehydratase PsycPRwf_2244 93 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 148652063 Common - Non-specific protein-tyrosine kinase PsycPRwf_0251 134 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 148652995 Common - phage integrase family protein PsycPRwf_1189 97 COG0582 XerC, Integrase DNA replication, recombination, and repair 148653328 Common dppF dipeptide transporter ATP-binding subunit PsycPRwf_1530 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 148653275 Nonpathogen - hypothetical protein PsycPRwf_1474 1 None None None 148654128 Common thyA thymidylate synthase PsycPRwf_2331 141 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 148653087 Nonpathogen - hypothetical protein PsycPRwf_1284 1 None None None 148653395 Common - hypothetical protein PsycPRwf_1597 2 None None None 148653982 Common - hypothetical protein PsycPRwf_2185 2 None None None 148652277 Common - biotin/lipoate A/B protein ligase PsycPRwf_0465 56 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 148653132 Nonpathogen - hypothetical protein PsycPRwf_1330 1 None None None 148653898 Common - Polyprenyl synthetase PsycPRwf_2101 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 148651978 Nonpathogen - hypothetical protein PsycPRwf_0162 1 None None None 148653321 Common - 2OG-Fe(II) oxygenase PsycPRwf_1523 44 COG3128 PiuC, Uncharacterized iron-regulated protein Function unknown 148652688 Common - S-adenosylmethionine synthetase PsycPRwf_0879 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 148653032 Common - hypothetical protein PsycPRwf_1227 4 None None None 148653740 Common - transposase IS3/IS911 family protein PsycPRwf_1943 53 None None None 148653666 Common - hypothetical protein PsycPRwf_1869 2 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 148652128 Common - CsbD family protein PsycPRwf_0316 55 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 148653975 Common valS valyl-tRNA synthetase PsycPRwf_2178 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 148653247 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_1445 137 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 148652936 Common - hypothetical protein PsycPRwf_1130 9 None None None 148652732 Common - hypothetical protein PsycPRwf_0925 3 None None None 148653568 Common - putative RNA methylase PsycPRwf_1771 163 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 148653551 Common - Organic solvent tolerance protein PsycPRwf_1754 120 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 148651859 Common - peptide deformylase PsycPRwf_0042 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 148652399 Common - hypothetical protein PsycPRwf_0587 2 None None None 148653337 Common - seryl-tRNA synthetase PsycPRwf_1539 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 148652270 Common - acyl carrier protein PsycPRwf_0458 207 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 148653198 Common - parB-like partition protein PsycPRwf_1396 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 148654064 Common - phosphate ABC transporter, ATPase subunit PsycPRwf_2267 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 148653017 Common - exodeoxyribonuclease V, alpha subunit PsycPRwf_1211 120 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 148653441 Common - protein of unknown function DUF541 PsycPRwf_1644 23 COG3471 COG3471, Predicted periplasmic/secreted protein Function unknown 148652161 Common - Diaminopimelate epimerase PsycPRwf_0349 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 148652699 Common rpmA 50S ribosomal protein L27 PsycPRwf_0892 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 148652511 Common - IS1 transposase PsycPRwf_0700 21 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 148652692 Nonpathogen - hypothetical protein PsycPRwf_0885 1 None None None 148652465 Common - secretion protein HlyD family protein PsycPRwf_0653 135 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 148653868 Common - phosphatase-like protein PsycPRwf_2071 30 COG3211 PhoX, Predicted phosphatase General function prediction only 148653943 Common - OmpA/MotB domain protein PsycPRwf_2146 168 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148652975 Common - hypothetical protein PsycPRwf_1169 5 None None None 148651879 Nonpathogen - hypothetical protein PsycPRwf_0062 2 None None None 148652232 Common - cell shape determining protein, MreB/Mrl family PsycPRwf_0420 231 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 148651846 Common - 2-nitropropane dioxygenase, NPD PsycPRwf_0029 106 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 148652647 Common - peptide chain release factor 2 PsycPRwf_0838 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 148653284 Nonpathogen - hypothetical protein PsycPRwf_1483 1 None None None 148652669 Common - ABC transporter related PsycPRwf_0860 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 148654031 Common - protein of unknown function DUF442 PsycPRwf_2234 31 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 148653203 Common - Uncharacterized protein involved in stress response PsycPRwf_1401 22 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 148651894 Common - stress protein PsycPRwf_0077 31 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 148653885 Common - Ion transport 2 domain protein PsycPRwf_2088 2 None None None 148653156 Nonpathogen - hypothetical protein PsycPRwf_1354 7 None None None 148652880 Nonpathogen - hypothetical protein PsycPRwf_1073 1 None None None 148654090 Common - hypothetical protein PsycPRwf_2293 30 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 148652682 Common - DNA gyrase, A subunit PsycPRwf_0873 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 148654014 Common - YceI family protein PsycPRwf_2217 115 COG2353 COG2353, Uncharacterized conserved protein Function unknown 148652934 Nonpathogen - hypothetical protein PsycPRwf_1128 1 None None None 148652579 Common - DEAD/DEAH box helicase domain protein PsycPRwf_0770 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 148652889 Common - Enoyl-CoA hydratase/isomerase PsycPRwf_1082 84 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 148653375 Common - ribonucleotide-diphosphate reductase subunit alpha PsycPRwf_1577 211 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 148653323 Common - IS1 transposase PsycPRwf_1525 21 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 148651932 Nonpathogen - hypothetical protein PsycPRwf_0115 1 None None None 148653001 Nonpathogen - hypothetical protein PsycPRwf_1195 1 None None None 148652898 Common - Integrase, catalytic region PsycPRwf_1091 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652204 Common - hypothetical protein PsycPRwf_0392 2 None None None 148654100 Common - Pirin domain protein domain protein PsycPRwf_2303 144 COG1741 COG1741, Pirin-related protein General function prediction only 148653304 Common - Integrase, catalytic region PsycPRwf_1504 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653464 Nonpathogen - hypothetical protein PsycPRwf_1667 1 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 148652533 Common - Zn-dependent hydrolase of the beta-lactamase fold-like protein PsycPRwf_0722 27 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 148652082 Common - succinyl-CoA synthetase, alpha subunit PsycPRwf_0270 215 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 148653255 Common - transcriptional regulator, LysR family PsycPRwf_1453 184 COG0583 LysR, Transcriptional regulator Transcription 148653211 Common - binding-protein-dependent transport systems inner membrane component PsycPRwf_1409 219 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 148654135 Common - ATP-dependent DNA helicase RecG PsycPRwf_2338 230 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 148652138 Common - ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD PsycPRwf_0326 235 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 148651870 Common - Leucyl aminopeptidase PsycPRwf_0053 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 148653311 Common - Uncharacterized iron-regulated membrane protein-like protein PsycPRwf_1511 63 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 148653959 Common - histone deacetylase superfamily PsycPRwf_2162 150 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 148652488 Common - fumarylacetoacetate (FAA) hydrolase PsycPRwf_0677 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 148653045 Common - Endoribonuclease L-PSP PsycPRwf_1241 166 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 148652470 Common - ABC transporter related PsycPRwf_0658 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 148652013 Common - transposase, IS605 OrfB family PsycPRwf_0197 70 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653673 Common - Lysine exporter protein (LYSE/YGGA) PsycPRwf_1876 79 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 148652856 Common - Outer membrane protein and related peptidoglycan-associated (lipo)protein-like protein PsycPRwf_1049 10 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 148653065 Common - inosine-5'-monophosphate dehydrogenase PsycPRwf_1261 236 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 148654060 Common - porphobilinogen deaminase PsycPRwf_2263 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 148652216 Common gltD glutamate synthase subunit beta PsycPRwf_0404 190 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 148652707 Common - Carboxymuconolactone decarboxylase PsycPRwf_0900 64 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 148653151 Nonpathogen - hypothetical protein PsycPRwf_1349 1 None None None 148653631 Common - ABC transporter related PsycPRwf_1834 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 148652247 Common - ribosomal protein S17 PsycPRwf_0435 219 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 148653365 Common - Biopolymer transport protein ExbD/TolR PsycPRwf_1567 138 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 148653879 Nonpathogen - hypothetical protein PsycPRwf_2082 2 COG5460 COG5460, Uncharacterized conserved protein Function unknown 148652655 Common - HPP family protein+B94 PsycPRwf_0846 70 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 148653677 Nonpathogen - protein of unknown function DUF710 PsycPRwf_1880 3 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 148653691 Common - protein of unknown function DUF1294 PsycPRwf_1894 55 COG3326 COG3326, Predicted membrane protein Function unknown 148653175 Common - gamma-glutamyltransferase PsycPRwf_1373 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 148653924 Common - Uncharacterized protein-like protein PsycPRwf_2127 53 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 148652357 Common - phosphoribosylformylglycinamidine synthase PsycPRwf_0545 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 148652220 Common - cytochrome c, class II PsycPRwf_0408 19 COG3909 COG3909, Cytochrome c556 Energy production and conversion 148653408 Common - conserved hypothetical protein 341 PsycPRwf_1610 45 COG1808 COG1808, Predicted membrane protein Function unknown 148652813 Common - short chain dehydrogenase PsycPRwf_1006 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 148652998 Common - aldehyde dehydrogenase PsycPRwf_1192 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 148652518 Nonpathogen - hypothetical protein PsycPRwf_0707 1 None None None 148652632 Common - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family PsycPRwf_0823 102 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 148654117 Common - twin-arginine translocation protein, TatA/E family subunit PsycPRwf_2320 28 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 148652678 Common - extracellular solute-binding protein, family 1 PsycPRwf_0869 129 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 148652617 Common - glutaredoxin 3 PsycPRwf_0808 128 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 148652763 Common - Enoyl-(acyl-carrier-protein)-like protein PsycPRwf_0956 214 COG0623 FabI, Enoyl- acyl-carrier-protein 148652475 Common - two component transcriptional regulator, LuxR family PsycPRwf_0663 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 148652336 Common - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase PsycPRwf_0524 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 148652671 Common - AMP-dependent synthetase and ligase PsycPRwf_0862 218 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 148653883 Common - isocitrate dehydrogenase, NADP-dependent PsycPRwf_2086 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 148653058 Common - alpha/beta hydrolase fold PsycPRwf_1254 96 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 148653850 Common - Alkane 1-monooxygenase PsycPRwf_2053 26 None None None 148652583 Common - UDP-N-acetylenolpyruvoylglucosamine reductase PsycPRwf_0774 140 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 148652983 Common - Cyclopropane-fatty-acyl-phospholipid synthase PsycPRwf_1177 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 148654066 Common - phosphate ABC transporter, inner membrane subunit PstC PsycPRwf_2269 223 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 148654163 Nonpathogen - hypothetical protein PsycPRwf_2366 2 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 148651888 Nonpathogen - hypothetical protein PsycPRwf_0071 1 None None None 148653291 Common - nucleoside recognition domain protein PsycPRwf_1490 22 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 148653646 Common - RarD protein, DMT superfamily transporter PsycPRwf_1849 99 COG2962 RarD, Predicted permeases General function prediction only 148652642 Common - carbamoyl-phosphate synthase, large subunit PsycPRwf_0833 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 148652276 Common - NUDIX hydrolase PsycPRwf_0464 119 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 148653262 Common - tryptophan synthase subunit beta PsycPRwf_1460 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 148653480 Common - Rhomboid family protein PsycPRwf_1683 86 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 148652256 Common rpmD 50S ribosomal protein L30 PsycPRwf_0444 121 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 148653490 Common - NADH dehydrogenase subunit H PsycPRwf_1693 186 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 148652314 Common hisG ATP phosphoribosyltransferase catalytic subunit PsycPRwf_0502 193 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 148653269 Common - drug resistance transporter, EmrB/QacA subfamily PsycPRwf_1468 175 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 148652008 Common - F0F1 ATP synthase subunit gamma PsycPRwf_0192 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 148653214 Common - extracellular solute-binding protein, family 5 PsycPRwf_1412 139 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 148653431 Common hscA chaperone protein HscA PsycPRwf_1633 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 148652572 Common - transcriptional regulator, BadM/Rrf2 family PsycPRwf_0763 144 COG1959 COG1959, Predicted transcriptional regulator Transcription 148652048 Common - hypothetical protein PsycPRwf_0233 10 None None None 148652723 Common - hypothetical protein PsycPRwf_0916 3 None None None 148654052 Common - DNA topoisomerase IV subunit B PsycPRwf_2255 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 148652952 Common - putative glutathione S-transferase YghU PsycPRwf_1146 94 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 148653582 Common - hypothetical protein PsycPRwf_1785 5 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 148652553 Common - transport system permease protein PsycPRwf_0744 189 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 148653976 Common - protein of unknown function DUF74 PsycPRwf_2179 23 COG0393 COG0393, Uncharacterized conserved protein Function unknown 148652527 Common - Sec-independent protein translocase, TatC subunit PsycPRwf_0716 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 148652788 Common - branched-chain amino acid aminotransferase PsycPRwf_0981 218 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 148653496 Common - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PsycPRwf_1699 160 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 148652375 Common - protein of unknown function DUF6, transmembrane PsycPRwf_0563 23 COG2962 RarD, Predicted permeases General function prediction only 148653994 Nonpathogen - Hemerythrin HHE cation binding domain protein PsycPRwf_2197 1 None None None 148653119 Common - Zn-ribbon-containing possibly nucleic-acid-binding protein-like protein PsycPRwf_1317 13 COG5595 COG5595, Zn-ribbon-containing, possibly nucleic-acid-binding protein General function prediction only 148653845 Common - DNA polymerase I PsycPRwf_2048 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 148652743 Common - amidophosphoribosyltransferase PsycPRwf_0936 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 148652441 Common - sodium/hydrogen exchanger PsycPRwf_0629 119 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 148653124 Common - LrgB family protein PsycPRwf_1322 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 148653135 Nonpathogen - hypothetical protein PsycPRwf_1333 1 None None None 148653282 Common - IS66 Orf2 family protein PsycPRwf_1481 23 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653202 Common - hypothetical protein PsycPRwf_1400 23 COG2378 COG2378, Predicted transcriptional regulator Transcription 148652904 Common - transcriptional regulator, TetR family PsycPRwf_1097 73 COG1309 AcrR, Transcriptional regulator Transcription 148653597 Common - undecaprenyl diphosphate synthase PsycPRwf_1800 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 148654078 Common - UDP-N-acetylglucosamine pyrophosphorylase PsycPRwf_2281 235 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 148653657 Common - elongation factor Tu PsycPRwf_1860 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 148653612 Common - Methenyltetrahydrofolate cyclohydrolase PsycPRwf_1815 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 148653644 Common - HesB/YadR/YfhF-family protein PsycPRwf_1847 55 COG0316 IscA, Uncharacterized conserved protein Function unknown 148652463 Common - ABC-2 type transporter PsycPRwf_0651 37 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 148654043 Common - hypothetical protein PsycPRwf_2246 16 None None None 148651905 Common - GCN5-related N-acetyltransferase PsycPRwf_0088 96 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 148653513 Common - carboxynorspermidine decarboxylase PsycPRwf_1716 69 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 148653295 Common - Integrase, catalytic region PsycPRwf_1495 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653272 Common - Integrase, catalytic region PsycPRwf_1471 140 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 148653226 Common - Holliday junction DNA helicase RuvA PsycPRwf_1424 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 148652839 Common - Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase PsycPRwf_1032 188 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 148652406 Common - Na+-dependent transporter-like protein PsycPRwf_0594 51 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 148651881 Common acnA aconitate hydratase PsycPRwf_0064 222 COG1048 AcnA, Aconitase A Energy production and conversion 148653716 Common - choline/carnitine/betaine transporter PsycPRwf_1919 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 148652780 Common - tRNA/rRNA methyltransferase (SpoU) PsycPRwf_0973 166 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 148653167 Common - IS66 Orf2 family protein PsycPRwf_1365 23 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 148652097 Nonpathogen - hypothetical protein PsycPRwf_0285 1 None None None 148652566 Common - acetyl-CoA carboxylase, carboxyl transferase, beta subunit PsycPRwf_0757 217 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 148652026 Nonpathogen - hypothetical protein PsycPRwf_0210 1 COG3094 COG3094, Uncharacterized protein conserved in bacteria Function unknown 148652229 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B PsycPRwf_0417 210 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 148652329 Nonpathogen - hypothetical protein PsycPRwf_0517 6 None None None 148652891 Common - FAD linked oxidase domain protein PsycPRwf_1084 45 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 148653129 Common - restriction modification system DNA specificity domain PsycPRwf_1327 67 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 148653610 Common - magnesium and cobalt transport protein CorA PsycPRwf_1813 172 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism