Lactobacillus casei ATCC 334, complete genome NC_008526 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 116494839 Common - Predicted transposase LSEI_1352 36 None None None 116495636 Common - Transposase, IS30 family LSEI_2181 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493836 Common - ABC-type branched-chain amino acid transport system, ATPase component LSEI_0268 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 116493749 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID, with ABC-type ATPase domain LSEI_0178 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116493719 Nonpathogen - Transcriptional regulator LSEI_0147 2 COG1846 MarR, Transcriptional regulators Transcription 116494303 Nonpathogen - hypothetical protein LSEI_0759 1 None None None 116495761 Common - FAD/FMN-containing dehydrogenase LSEI_2309 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 116493635 Common - glycine betaine/carnitine/choline ABC transporter, ATP-binding protein LSEI_0063 159 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 116494822 Common - Transposase LSEI_1333 51 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495233 Common - Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component LSEI_1753 79 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 116495226 Common - Phosphoribosylamine-glycine ligase LSEI_1746 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 116495735 Common - hypothetical protein LSEI_2283 6 COG5646 COG5646, Uncharacterized conserved protein Function unknown 116495879 Nonpathogen - hypothetical protein LSEI_2435 1 None None None 116494798 Common - Transposase LSEI_1309 136 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496318 Nonpathogen - hypothetical protein LSEI_2902 1 None None None 116494658 Common - F0F1-type ATP synthase, subunit b LSEI_1162 168 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 116495503 Common - glycogen branching enzyme LSEI_2040 158 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 116494965 Common recU Holliday junction-specific endonuclease LSEI_1480 17 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 116495771 Common - Predicted transcriptional regulator LSEI_2319 122 COG1725 COG1725, Predicted transcriptional regulators Transcription 116496219 Common - ABC-type oligopeptide transport system, periplasmic component LSEI_2797 177 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 116495913 Common - hypothetical protein LSEI_2469 5 None None None 116496251 Common - Transposase, IS30 family LSEI_2831 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494866 Common engA GTP-binding protein EngA LSEI_1380 231 COG1160 COG1160, Predicted GTPases General function prediction only 116494212 Common - Galactokinase LSEI_0664 96 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 116494257 Common - 4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase of PMT family LSEI_0709 25 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 116495334 Common - RNA:NAD 2'-phosphotransferase LSEI_1867 43 COG1859 KptA, RNA:NAD 2'-phosphotransferase Translation, ribosomal structure and biogenesis 116495744 Common - Ribosomal protein L33 LSEI_2292 32 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 116494020 Common - hypothetical protein LSEI_0459 3 None None None 116495249 Common - Uncharacterized domain/protein associated with RNase G and E LSEI_1769 17 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 116493922 Common - CRISPR-associated protein LSEI_0355 44 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 116496237 Common - cellobiose-specific PTS system IIC component LSEI_2815 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 116495513 Common - Transcriptional regulator LSEI_2050 64 COG1316 LytR, Transcriptional regulator Transcription 116494221 Common - galactitol PTS, EIIC LSEI_0673 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 116493686 Common - ABC-type multidrug transport system, ATPase component LSEI_0114 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494072 Common - hypothetical protein LSEI_0514 2 None None None 116495884 Nonpathogen - hypothetical protein LSEI_2440 1 None None None 116496169 Common - aspartate aminotransferase LSEI_2747 105 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 116496203 Common - SAM-dependent methyltransferase LSEI_2781 13 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 116493876 Common - ABC-type sugar transport system, ATPase component LSEI_0308 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 116496206 Nonpathogen - Predicted acetyltransferase LSEI_2784 2 COG3393 COG3393, Predicted acetyltransferase General function prediction only 116495049 Common hrcA heat-inducible transcription repressor LSEI_1567 150 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 116494493 Common - ABC-type maltose transport system, permease component LSEI_0989 145 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 116495942 Common rplV 50S ribosomal protein L22 LSEI_2498 228 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 116496110 Nonpathogen - hypothetical protein LSEI_2683 2 None None None 116495075 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_1593 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116493612 Nonpathogen - hypothetical protein LSEI_0038 1 None None None 116494119 Common - Predicted membrane protein LSEI_0563 3 COG5446 COG5446, Predicted integral membrane protein Function unknown 116493740 Common - Endonuclease III related protein LSEI_0168 158 COG2231 COG2231, Uncharacterized protein related to Endonuclease III DNA replication, recombination, and repair 116494902 Nonpathogen - hypothetical protein LSEI_1416 1 None None None 116494182 Common - Na+/H+-dicarboxylate symporter LSEI_0632 153 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 116496124 Common - Phosphotransferase system IIA component LSEI_2700 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 116494804 Common - pyruvate carboxylase LSEI_1315 239 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 116494481 Common - Esterase/lipase LSEI_0975 36 COG1647 COG1647, Esterase/lipase General function prediction only 116495726 Common - permease of the major facilitator superfamily LSEI_2274 233 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494612 Nonpathogen - Growth regulator LSEI_1113 1 None None None 116495765 Common - Glutamyl- and glutaminyl-tRNA synthetase LSEI_2313 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 116495353 Common - ABC-type oligopeptide transport system, ATPase component LSEI_1886 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 116493716 Common - Methylated DNA-protein cysteine methyltransferase LSEI_0144 201 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 116494472 Common - central glycolytic genes regulator LSEI_0966 17 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 116494557 Common - NAD-dependent DNA ligase LSEI_1055 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 116495445 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein LSEI_1979 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 116494378 Common - Predicted integral membrane protein LSEI_0863 21 COG0392 COG0392, Predicted integral membrane protein Function unknown 116495905 Common - Transposase LSEI_2461 55 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116493629 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0057 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116494555 Common - Predicted membrane protein LSEI_1053 8 COG4269 COG4269, Predicted membrane protein Function unknown 116494577 Common - Predicted dehydrogenase related protein LSEI_1075 137 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 116493974 Common - Predicted membrane protein LSEI_0410 31 COG1511 COG1511, Predicted membrane protein Function unknown 116496120 Nonpathogen - hypothetical protein LSEI_2694 1 None None None 116494424 Common - Predicted Zn-dependent peptidase LSEI_0917 17 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 116496247 Common - hypothetical protein LSEI_2826 10 COG4687 COG4687, Uncharacterized protein conserved in bacteria Function unknown 116493860 Common - Phosphomannose isomerase LSEI_0292 52 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 116495674 Common - Predicted transcriptional regulator LSEI_2219 93 COG0789 SoxR, Predicted transcriptional regulators Transcription 116496127 Nonpathogen - Triosephosphate isomerase LSEI_2703 34 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 116495778 Common - Predicted acetyltransferase LSEI_2326 40 COG2388 COG2388, Predicted acetyltransferase General function prediction only 116494362 Common - Predicted phosphoesterase or phosphohydrolase LSEI_0818 21 COG4186 COG4186, Predicted phosphoesterase or phosphohydrolase General function prediction only 116496311 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_2895 172 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 116493673 Common - Aspartate-semialdehyde dehydrogenase LSEI_0101 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 116495170 Common - RNA-binding protein, KH domain LSEI_1689 65 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 116495926 Common - Adenylate kinase LSEI_2482 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 116494430 Common - RecA/RadA recombinase LSEI_0923 240 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 116493643 Common - Copper chaperone LSEI_0071 20 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 116495064 Common - Undecaprenyl pyrophosphate synthase LSEI_1582 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 116495598 Nonpathogen - hypothetical protein LSEI_2140 1 None None None 116494773 Common - ABC-type phosphate transport system, periplasmic component LSEI_1282 162 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 116493620 Nonpathogen - hypothetical protein LSEI_0047 1 None None None 116494518 Common - ABC-type multidrug transport system, permease component LSEI_1014 113 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 116495417 Nonpathogen - hypothetical protein LSEI_1951 2 None None None 116494893 Common - Predicted membrane protein LSEI_1407 170 COG0344 COG0344, Predicted membrane protein Function unknown 116494745 Common - Predicted sugar phosphatase of HAD family LSEI_1253 155 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 116496064 Common - Excinuclease ATPase subunit LSEI_2637 230 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 116495365 Common - hypothetical protein LSEI_1899 3 None None None 116495959 Common - DNA-directed RNA polymerase subunit beta' LSEI_2515 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 116496172 Common - Alpha-L-fucosidase LSEI_2750 32 COG3669 COG3669, Alpha-L-fucosidase Carbohydrate transport and metabolism 116495196 Nonpathogen - Predicted small secreted protein LSEI_1715 1 COG5584 COG5584, Predicted small secreted protein Function unknown 116494295 Nonpathogen - hypothetical protein LSEI_0751 1 None None None 116495093 Common - ABC-type oligopeptide transport system, ATPase component LSEI_1611 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 116495008 Common - methionine sulfoxide reductase B LSEI_1525 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 116494278 Common - Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family LSEI_0733 72 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 116495808 Common - Glutamate 5-kinase LSEI_2358 200 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 116495440 Nonpathogen - hypothetical protein LSEI_1974 1 None None None 116495011 Common - Inorganic pyrophosphatase LSEI_1528 7 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 116493721 Nonpathogen - Predicted membrane protein LSEI_0149 4 COG3759 COG3759, Predicted membrane protein Function unknown 116495562 Common - Sucrose-6-phosphate hydrolase LSEI_2104 51 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 116493636 Common - Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) LSEI_0064 83 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 116495684 Nonpathogen - hypothetical protein LSEI_2231 2 None None None 116494796 Common - dihydrolipoamide acetyltransferase LSEI_1307 197 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 116496036 Common - Predicted integral membrane protein LSEI_2608 25 COG3548 COG3548, Predicted integral membrane protein Function unknown 116495151 Common - Aminodeoxychorismate lyase family LSEI_1670 186 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 116496051 Common - hypothetical protein LSEI_2623 132 COG1704 LemA, Uncharacterized conserved protein Function unknown 116496025 Common - Phosphotransferase system galacitol-specific IIA domain (Ntr-type) LSEI_2596 11 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 116493728 Common - hypothetical protein LSEI_0156 4 None None None 116493846 Common - Deoxyribose-phosphate aldolase LSEI_0278 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 116494125 Common - Transposase, IS30 family LSEI_0571 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495681 Nonpathogen - hypothetical protein LSEI_2228 13 COG4295 COG4295, Uncharacterized protein conserved in bacteria Function unknown 116495327 Common - Citrate lyase synthetase LSEI_1860 27 COG3053 CitC, Citrate lyase synthetase Energy production and conversion 116493865 Common - Putative transcription activator LSEI_0297 76 COG0819 TenA, Putative transcription activator Transcription 116495699 Common - cellobiose-specific PTS system IIB component LSEI_2247 30 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 116495488 Common - Fe2+/Zn2+ uptake regulation protein LSEI_2025 139 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 116495855 Common - NADH:flavin oxidoreductase, Old Yellow Enzyme family LSEI_2409 176 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 116495240 Common - Phosphotransferase system, HPr-related protein LSEI_1760 105 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 116495252 Common - hypothetical protein LSEI_1772 4 None None None 116494086 Nonpathogen - hypothetical protein LSEI_0529 1 None None None 116495870 Common - hypothetical protein LSEI_2426 4 None None None 116493961 Common - Uncharacterized NAD(FAD)-dependent dehydrogenase LSEI_0397 220 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 116494503 Common - ABC-type uncharacterized transport system, ATPase component LSEI_0999 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 116496157 Common ulaD 3-keto-L-gulonate-6-phosphate decarboxylase LSEI_2735 56 COG0269 SgbH, 3-hexulose-6-phosphate synthase and related proteins Carbohydrate transport and metabolism 116494485 Common - Transcriptional regulator LSEI_0979 126 COG1609 PurR, Transcriptional regulators Transcription 116494695 Common - Phosphoglycerate mutase family protein LSEI_1201 36 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116495436 Common - hypothetical protein LSEI_1970 5 None None None 116493915 Nonpathogen - hypothetical protein LSEI_0348 1 None None None 116493811 Common - hypothetical protein LSEI_0240 6 None None None 116494993 Nonpathogen - hypothetical protein LSEI_1510 1 None None None 116495118 Common - Geranylgeranyl pyrophosphate synthase LSEI_1636 239 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 116495612 Common - Predicted membrane protein, putative toxin regulator LSEI_2155 20 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 116493988 Nonpathogen - hypothetical protein LSEI_0424 1 None None None 116495831 Common - lactococcin A ABC transporter permease protein LSEI_2381 33 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 116494271 Nonpathogen - hypothetical protein LSEI_0726 1 None None None 116494036 Common - permease of the major facilitator superfamily LSEI_0477 21 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494949 Common - Predicted oxidoreductase LSEI_1463 28 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 116495692 Common - Co-chaperonin GroES (HSP10) LSEI_2239 209 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 116496108 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_2681 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495834 Nonpathogen - hypothetical protein LSEI_2386 1 None None None 116494938 Common - Carbamoylphosphate synthase large subunit LSEI_1452 237 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 116494730 Nonpathogen - hypothetical protein LSEI_1236 1 None None None 116494568 Common - permease of the major facilitator superfamily LSEI_1066 194 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495295 Nonpathogen - Glutaredoxin related protein LSEI_1819 1 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 116496322 Common - Predicted RNA-binding protein LSEI_2906 69 COG1847 Jag, Predicted RNA-binding protein General function prediction only 116493582 Common - Single-stranded DNA-binding protein LSEI_0008 123 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 116495412 Nonpathogen - hypothetical protein LSEI_1946 1 None None None 116495303 Common - Seryl-tRNA synthetase LSEI_1836 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 116495584 Common - hypothetical protein LSEI_2126 6 COG4367 COG4367, Uncharacterized protein conserved in bacteria Function unknown 116493854 Common - hypothetical protein LSEI_0286 7 None None None 116494549 Nonpathogen - hypothetical protein LSEI_1047 1 None None None 116493929 Common - Transposase, IS30 family LSEI_0362 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494692 Common - hypothetical protein LSEI_1198 8 COG4493 COG4493, Uncharacterized protein conserved in bacteria Function unknown 116496145 Common - sorbitol PTS, EIIBC LSEI_2722 22 COG3732 SrlE, Phosphotransferase system sorbitol-specific component IIBC Carbohydrate transport and metabolism 116493609 Nonpathogen - hypothetical protein LSEI_0035 1 None None None 116496190 Common - ADP-ribose pyrophosphatase LSEI_2768 61 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495547 Common - Hydantoinase/oxoprolinase family enzume LSEI_2087 28 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116493692 Common murQ N-acetylmuramic acid-6-phosphate etherase LSEI_0120 83 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 116494143 Common - Transposase LSEI_0590 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496094 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB LSEI_2667 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 116494598 Common - hypothetical protein LSEI_1099 9 None None None 116495553 Common - Type I site-specific restriction-modification system, R (restriction) subunit related helicase LSEI_2095 140 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 116494523 Common - D-fructose-6-phosphate amidotransferase LSEI_1019 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 116495700 Common - Metal-dependent protease with possible chaperone activity LSEI_2248 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 116495707 Common - Predicted methyltransferase LSEI_2255 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 116494809 Nonpathogen - hypothetical protein LSEI_1320 1 None None None 116494922 Common - Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase LSEI_1436 238 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 116495658 Common - Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component LSEI_2203 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 116495519 Common - hypothetical protein LSEI_2058 6 None None None 116495931 Common - Ribosomal protein L18 LSEI_2487 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 116494914 Common - Phosphoribosyl-ATP pyrophosphohydrolase LSEI_1428 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 116496302 Common - Mannitol/fructose-specific phosphotransferase system, IIA domain LSEI_2886 70 COG4668 MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain Carbohydrate transport and metabolism 116495662 Common - Adenosine deaminase LSEI_2207 106 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 116495669 Nonpathogen - Transcriptional regulator, xre family LSEI_2214 1 COG1396 HipB, Predicted transcriptional regulators Transcription 116494152 Common - Cystathionine beta-lyase/cystathionine gamma-synthase LSEI_0600 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 116496187 Common - ABC-type sugar transport system, ATPase component LSEI_2765 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 116495588 Nonpathogen - Predicted membrane protein LSEI_2130 1 COG4640 COG4640, Predicted membrane protein Function unknown 116493995 Common - 3-methyladenine DNA glycosylase LSEI_0431 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 116495199 Common - Predicted ABC-type exoprotein transport system, permease component LSEI_1718 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 116495583 Common - alcohol-acetaldehyde dehydrogenase LSEI_2125 170 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 116494130 Nonpathogen - hypothetical protein LSEI_0577 2 None None None 116496006 Common - Lipoate-protein ligase A LSEI_2575 11 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 116495036 Common - N-formylglutamate amidohydrolase LSEI_1554 55 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 116493669 Common - Tetrahydrodipicolinate N-succinyltransferase LSEI_0097 103 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 116495981 Common - hypothetical protein LSEI_2550 21 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 116494767 Common - Cell division protein LSEI_1276 54 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 116494197 Common - ABC-type multidrug transport system, ATPase component LSEI_0648 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494231 Common - DNA repair exonuclease LSEI_0683 111 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 116494859 Common - Predicted membrane protein LSEI_1373 16 COG3601 COG3601, Predicted membrane protein Function unknown 116495993 Common - Superfamily II DNA and RNA helicase LSEI_2562 241 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 116493751 Nonpathogen - NUDIX family hydrolase LSEI_0180 1 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116494165 Nonpathogen - hypothetical protein LSEI_0615 1 None None None 116495536 Nonpathogen - hypothetical protein LSEI_2076 1 None None None 116495377 Nonpathogen - hypothetical protein LSEI_1911 1 None None None 116496287 Common - Response regulator of citrate/malate metabolism LSEI_2869 211 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 116496137 Common - hypothetical protein LSEI_2714 11 None None None 116494327 Nonpathogen - hypothetical protein LSEI_0783 1 None None None 116494116 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB LSEI_0560 25 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 116494205 Common - DNA-entry nuclease LSEI_0656 7 None None None 116494706 Common - fhu operon transcription regulator LSEI_1212 154 COG0583 LysR, Transcriptional regulator Transcription 116494238 Common - Esterase/lipase LSEI_0690 112 COG0657 Aes, Esterase/lipase Lipid metabolism 116494406 Common - Competence protein LSEI_0898 11 COG4469 CoiA, Competence protein General function prediction only 116495399 Common - Phage portal protein, SPP1 Gp6-like LSEI_1933 8 None None None 116495072 Common - Amino acid transporter LSEI_1590 190 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 116494337 Nonpathogen - D-Ala-teichoic acid biosynthesis protein (putative) LSEI_0793 1 None None None 116493821 Common - lactose transport regulator LSEI_0250 113 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 116494250 Nonpathogen - hypothetical protein LSEI_0702 1 None None None 116493798 Common - 6-phosphogluconate dehydrogenase-like protein LSEI_0227 187 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 116495006 Common - endonuclease IV LSEI_1523 100 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 116493904 Common - Predicted membrane protein LSEI_0336 164 COG1511 COG1511, Predicted membrane protein Function unknown 116494574 Common - Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LSEI_1072 27 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 116495461 Common - Transposase, IS30 family LSEI_1995 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495066 Common - Uridylate kinase LSEI_1584 244 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 116495190 Common - DNA polymerase I - 3'-5' exonuclease and polymerase domains LSEI_1709 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 116495815 Nonpathogen - hypothetical protein LSEI_2365 1 None None None 116494562 Common - putative lipid kinase LSEI_1060 116 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 116495486 Nonpathogen - hypothetical protein LSEI_2023 4 None None None 116495229 Common - Phosphoribosylaminoimidazole (AIR) synthetase LSEI_1749 226 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 116493783 Common - Chromosome partitioning ATPase LSEI_0212 213 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 116494759 Common - Protein required for the initiation of cell division LSEI_1268 2 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 116494175 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase LSEI_0625 135 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 116495914 Common - Predicted transcriptional regulator LSEI_2470 62 COG1695 COG1695, Predicted transcriptional regulators Transcription 116495975 Common - Septum formation initiator LSEI_2544 11 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 116494580 Nonpathogen - hypothetical protein LSEI_1078 2 None None None 116494685 Common - Transcriptional regulator, xre family LSEI_1190 5 COG1476 COG1476, Predicted transcriptional regulators Transcription 116496175 Common - permease of the major facilitator superfamily LSEI_2753 211 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495452 Nonpathogen - hypothetical protein LSEI_1986 1 None None None 116494657 Common - F0F1-type ATP synthase, subunit c LSEI_1161 25 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 116496147 Common - Glucitol operon activator LSEI_2724 15 COG4578 GutM, Glucitol operon activator Transcription 116495491 Common - Acetyltransferase, GNAT family LSEI_2028 44 COG0456 RimI, Acetyltransferases General function prediction only 116493998 Common - Beta-lactamase class C related penicillin binding protein LSEI_0435 99 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 116495211 Nonpathogen - hypothetical protein LSEI_1731 1 None None None 116493613 Nonpathogen - hypothetical protein LSEI_0039 1 None None None 116494957 Common - fhu operon transcription regulator LSEI_1471 188 COG0583 LysR, Transcriptional regulator Transcription 116494621 Nonpathogen - hypothetical protein LSEI_1122 1 None None None 116495111 Common - Guanylate kinase LSEI_1629 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 116495264 Common - 3-hydroxy-3-methylglutaryl CoA synthase LSEI_1785 70 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 116494380 Common - aromatic amino acid aminotransferase LSEI_0865 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 116495727 Nonpathogen - hypothetical protein LSEI_2275 2 None None None 116495629 Common - ABC-type Na+ efflux pump, permease component LSEI_2174 45 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 116494950 Common - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase related enzyme LSEI_1464 153 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 116495081 Common - RimM protein, required for 16S rRNA processing LSEI_1599 185 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 116494540 Nonpathogen - hypothetical protein LSEI_1037 1 None None None 116495468 Common - hypothetical protein LSEI_2003 6 None None None 116494358 Common - Glycerophosphoryl diester phosphodiesterase LSEI_0814 119 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 116493697 Common - Cation transport ATPase LSEI_0125 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116494461 Nonpathogen - hypothetical protein LSEI_0954 1 None None None 116495841 Nonpathogen - hypothetical protein LSEI_2394 1 None None None 116494310 Common - Transposase, IS30 family LSEI_0766 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493598 Common - Predicted hydrolase of the HAD superfamily LSEI_0024 104 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116494137 Common - hypothetical protein LSEI_0584 25 None None None 116495759 Common - Ribonuclease III family protein LSEI_2307 37 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 116494002 Common - Glutamine synthetase LSEI_0439 223 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 116495217 Nonpathogen - Monooxygenase LSEI_1737 1 None None None 116494912 Common - Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase LSEI_1426 240 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 116495627 Common - Acetate kinase LSEI_2172 161 COG0282 ackA, Acetate kinase Energy production and conversion 116494602 Common - Transposase LSEI_1103 51 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495882 Nonpathogen - hypothetical protein LSEI_2438 1 None None None 116494673 Common - ABC-type metal ion transport system, ATPase component LSEI_1178 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 116494988 Common glyQ glycyl-tRNA synthetase subunit alpha LSEI_1504 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 116494845 Common - BS_ykrK family protein LSEI_1359 6 None None None 116495651 Common - hypothetical protein LSEI_2196 11 COG5341 COG5341, Uncharacterized protein conserved in bacteria Function unknown 116493956 Nonpathogen - hypothetical protein LSEI_0392 1 None None None 116496007 Common - HD superfamily phosphohydrolase LSEI_2576 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 116494083 Nonpathogen - hypothetical protein LSEI_0526 1 None None None 116494831 Common - ABC-type amino acid transport system, permease and periplasmic component LSEI_1344 185 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116495784 Common - ABC-type multidrug transport system, ATPase component LSEI_2332 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494534 Common - Gamma-aminobutyrate permease related permease LSEI_1031 140 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 116493627 Common - hypothetical protein LSEI_0054 3 None None None 116494054 Common - hypothetical protein LSEI_0496 13 None None None 116494360 Common - Predicted multitransmembrane protein LSEI_0816 24 COG5438 COG5438, Predicted multitransmembrane protein Function unknown 116495510 Common - Transposase, IS30 family LSEI_2047 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116496298 Common - Phosphoribosylpyrophosphate synthetase LSEI_2882 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 116493679 Nonpathogen - Phospholipase A2 family enzyme LSEI_0107 1 None None None 116495319 Common - hypothetical protein of possible phage origin LSEI_1852 6 None None None 116495900 Common - ABC-type uncharacterized transport system, permease component LSEI_2456 28 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 116494266 Common - hypothetical protein LSEI_0721 6 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 116493703 Common - anaerobic ribonucleoside triphosphate reductase LSEI_0131 99 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 116495311 Common - Acetyltransferase, including N-acetylase of ribosomal protein LSEI_1844 21 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 116494814 Common - Predicted hydrolase (metallo-beta-lactamase superfamily) LSEI_1325 121 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 116495423 Common - hypothetical protein LSEI_1957 8 None None None 116495141 Common - hypothetical protein LSEI_1660 8 COG4483 COG4483, Uncharacterized protein conserved in bacteria Function unknown 116493886 Nonpathogen - hypothetical protein LSEI_0318 1 None None None 116493769 Common - Pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein LSEI_0198 17 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 116494015 Common - Transcriptional antiterminator LSEI_0453 26 COG3711 BglG, Transcriptional antiterminator Transcription 116495895 Common - Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II LSEI_2451 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116496056 Common - ABC-type proline/glycine betaine transport system, ATPase component LSEI_2628 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 116494975 Common - Mevalonate kinase LSEI_1491 64 COG1577 ERG12, Mevalonate kinase Lipid metabolism 116495521 Common - Phosphoglycerate mutase family protein LSEI_2060 137 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116494636 Common - Tryptophan-rich sensory protein LSEI_1138 55 COG3476 COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) Signal transduction mechanisms 116494641 Nonpathogen - hypothetical protein LSEI_1144 1 None None None 116495477 Common - dTDP-4-dehydrorhamnose 3,5-epimerase related enzyme LSEI_2014 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 116496048 Common - Sortase related acyltransferase LSEI_2620 82 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 116494782 Common - Excinuclease ATPase subunit LSEI_1291 243 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 116494113 Nonpathogen - hypothetical protein LSEI_0557 1 None None None 116495021 Common - D-Tyr-tRNAtyr deacylase LSEI_1538 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 116495868 Common - NAD-dependent aldehyde dehydrogenase LSEI_2424 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 116495605 Common - Predicted ATP-grasp enzyme LSEI_2148 18 COG3919 COG3919, Predicted ATP-grasp enzyme General function prediction only 116495146 Common - DNA-binding response regulator, CitB family (Rec-wHTH domains) LSEI_1665 215 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 116495154 Common - Predicted transcriptional regulator LSEI_1673 119 COG1733 COG1733, Predicted transcriptional regulators Transcription 116493591 Common - Predicted integral membrane protein LSEI_0017 35 COG3548 COG3548, Predicted integral membrane protein Function unknown 116495952 Common - elongation factor G LSEI_2508 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 116494095 Common - Type IV secretory pathway, VirB4 component LSEI_0538 13 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 116495535 Common - hypothetical protein LSEI_2075 4 None None None 116495964 Common - tRNA-dihydrouridine synthase LSEI_2533 211 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 116494715 Common - hypothetical protein LSEI_1221 53 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 116494872 Common - ATPase component of ABC transporter with duplicated ATPase domains LSEI_1386 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 116495664 Nonpathogen - hypothetical protein LSEI_2209 1 None None None 116495271 Common - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase LSEI_1792 205 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116495164 Common - Predicted metal-binding, possibly nucleic acid-binding protein LSEI_1683 12 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 116496307 Nonpathogen - hypothetical protein LSEI_2891 1 None None None 116494410 Common ppnK inorganic polyphosphate/ATP-NAD kinase LSEI_0902 236 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 116495047 Common - Molecular chaperone LSEI_1565 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 116494100 Nonpathogen - hypothetical protein LSEI_0543 1 None None None 116494328 Common - Alanyl-tRNA synthetase LSEI_0784 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116494319 Common - NAD-dependent alcohol-acetaldehyde dehydrogenase and iron-binding alcohol dehydrogenase LSEI_0775 213 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 116494074 Common - Transposase, IS30 family LSEI_0516 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493844 Common - cellobiose-specific PTS system IIC component LSEI_0276 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 116493651 Nonpathogen - hypothetical protein LSEI_0079 1 None None None 116493931 Common - hypothetical protein LSEI_0364 6 None None None 116494184 Common - L-lactate dehydrogenase LSEI_0634 175 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 116495285 Common - Transcriptional regulator LSEI_1807 144 COG2188 PhnF, Transcriptional regulators Transcription 116495391 Common - hypothetical protein LSEI_1925 6 None None None 116494939 Common - carbamoyl phosphate synthase small subunit LSEI_1453 233 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 116495801 Common - Sugar diacid utilization regulator LSEI_2351 41 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 116494948 Common - Ribonuclease HI LSEI_1462 10 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 116494107 Nonpathogen - Predicted holin-like toxin LSEI_0550 1 None None None 116495828 Nonpathogen - hypothetical protein LSEI_2378 1 None None None 116495134 Common - glutamine synthetase repressor LSEI_1653 30 COG0789 SoxR, Predicted transcriptional regulators Transcription 116496258 Common - ABC-type sugar transport system, periplasmic component LSEI_2840 118 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 116495425 Nonpathogen - hypothetical protein LSEI_1959 1 None None None 116494550 Nonpathogen - hypothetical protein LSEI_1048 2 None None None 116495305 Common - hypothetical protein LSEI_1838 6 None None None 116494793 Common def peptide deformylase LSEI_1303 209 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 116494682 Common - hypothetical protein LSEI_1187 6 COG5506 COG5506, Uncharacterized conserved protein Function unknown 116494505 Common - DNA polymerase III, epsilon subunit related 3'-5' exonuclease LSEI_1001 170 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 116495346 Common - alpha/beta hydrolase superfamily protein LSEI_1879 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 116496122 Common - Transcriptional antiterminator LSEI_2696 7 COG3711 BglG, Transcriptional antiterminator Transcription 116496226 Common - Metal-dependent hydrolase of the beta-lactamase superfamily I LSEI_2804 64 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 116494376 Common - Glycosyltransferase LSEI_0861 193 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 116494615 Common - N-acetylmuramidase LSEI_1116 66 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 116494421 Common - Predicted rRNA methylase (SpoU class) LSEI_0914 157 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 116495775 Common - Integral membrane protein, PIN and TRAM domains LSEI_2323 43 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 116494346 Common - CBS domain containing protein LSEI_0802 13 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 116493809 Common - Polysaccharide Transporter, PST family LSEI_0238 46 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 116493802 Nonpathogen - hypothetical protein LSEI_0231 1 None None None 116495179 Common - Ribosomal protein L35 LSEI_1698 145 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 116496234 Common - Argininosuccinate lyase LSEI_2812 228 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 116494891 Common hslU ATP-dependent protease ATP-binding subunit LSEI_1405 216 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 116495559 Common - sucrose PTS, EIIBCA LSEI_2101 61 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 116495363 Nonpathogen - hypothetical protein LSEI_1897 1 None None None 116494545 Nonpathogen - hypothetical protein LSEI_1043 1 None None None 116496214 Nonpathogen - hypothetical protein LSEI_2792 1 None None None 116494895 Common - DNA topoisomerase IV subunit A LSEI_1409 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 116494784 Common - Phosphoglycerate mutase family protein LSEI_1293 157 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116495714 Common - hypothetical protein LSEI_2262 85 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 116494775 Common - Tellurite resistance protein LSEI_1284 38 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 116493675 Nonpathogen - hypothetical protein LSEI_0103 1 None None None 116495619 Common - Asparagine synthase (glutamine-hydrolyzing) LSEI_2162 186 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 116496009 Common - hypothetical protein LSEI_2578 45 COG1434 COG1434, Uncharacterized conserved protein Function unknown 116495069 Common - URI-like endonuclease LSEI_1587 74 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 116494904 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_1418 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116494321 Common - Mn-dependent transcriptional regulator LSEI_0777 92 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 116495690 Nonpathogen - hypothetical protein LSEI_2237 1 None None None 116494925 Common - Fibronectin-binding protein LSEI_1439 70 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 116493959 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_0395 42 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 116496280 Common - Predicted hydrolase of the HAD superfamily LSEI_2862 117 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116493633 Common - Transcriptional regulator LSEI_0061 70 COG1309 AcrR, Transcriptional regulator Transcription 116495073 Common - Predicted membrane protein LSEI_1591 47 COG4420 COG4420, Predicted membrane protein Function unknown 116495231 Common - Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain LSEI_1751 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 116495336 Common - Predicted dinucleotide-binding enzyme LSEI_1869 54 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 116493640 Nonpathogen - hypothetical protein LSEI_0068 1 None None None 116495053 Common - hypothetical protein LSEI_1571 119 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 116493615 Common - hypothetical protein LSEI_0041 9 None None None 116495634 Nonpathogen - hypothetical protein LSEI_2179 2 None None None 116496081 Common - Phosphotransferase system fructose-specific component IIB LSEI_2654 140 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 116493848 Common - Purine-nucleoside phosphorylase LSEI_0280 98 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 116496119 Nonpathogen - hypothetical protein LSEI_2693 1 None None None 116493838 Common - 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme, amidase family LSEI_0270 26 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 116494572 Common - Membrane protease subunit, stomatin/prohibitin family LSEI_1070 217 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 116494967 Common - Predicted EndoIII-related endonuclease LSEI_1483 237 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 116494671 Common - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase LSEI_1175 214 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116493696 Common - Predicted transcriptional regulator LSEI_0124 152 COG0640 ArsR, Predicted transcriptional regulators Transcription 116495095 Common - Acyl carrier protein LSEI_1613 208 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116496282 Common - hypothetical protein LSEI_2864 12 None None None 116494746 Common - DNA repair protein LSEI_1254 177 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 116493935 Common - Sugar metabolism regulatory protein, HTH and periplasmic binding domains LSEI_0368 128 COG1609 PurR, Transcriptional regulators Transcription 116493852 Nonpathogen - hypothetical protein LSEI_0284 1 None None None 116494001 Common - Predicted glutamine amidotransferase LSEI_0438 123 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 116496316 Common - hypothetical protein LSEI_2900 31 COG3610 COG3610, Uncharacterized conserved protein Function unknown 116494223 Nonpathogen - hypothetical protein LSEI_0675 1 None None None 116495359 Common - ABC-type oligopeptide transport system, periplasmic component LSEI_1892 161 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 116493867 Common - Hydroxyethylthiazole kinase, sugar kinase family LSEI_0299 75 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 116496201 Common - Metal-dependent hydrolase LSEI_2779 11 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 116496167 Common - dipeptidase LSEI_2745 161 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116495889 Common - ABC-type phosphate/phosphonate transport system, periplasmic component LSEI_2445 81 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 116496087 Common - Subtilisin-like serine protease LSEI_2660 9 None None None 116493924 Common - hypothetical protein LSEI_0357 7 None None None 116495509 Common - Arsenate reductase related protein, glutaredoxin family LSEI_2046 46 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 116494837 Common obgE GTPase ObgE LSEI_1350 249 COG0536 Obg, Predicted GTPase General function prediction only 116495746 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase LSEI_2294 60 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 116493899 Common - hypothetical protein LSEI_0331 11 None None None 116495083 Common - Ribosomal protein S16 LSEI_1601 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 116495227 Common - AICAR transformylase/IMP cyclohydrolase PurH LSEI_1747 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 116496106 Common - Uncharacterized membrane-associated protein LSEI_2679 150 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 116493607 Common - Dipeptidase LSEI_0033 23 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 116494942 Common - Xanthine/uracil permease LSEI_1456 125 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 116495103 Common - Predicted GTPase LSEI_1621 163 COG1162 COG1162, Predicted GTPases General function prediction only 116494339 Common - D-alanyl transfer protein LSEI_0795 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 116496155 Common - putative L-xylulose 5-phosphate 3-epimerase LSEI_2733 28 COG3623 SgaU, Putative L-xylulose-5-phosphate 3-epimerase Carbohydrate transport and metabolism 116494630 Common - DNA-entry nuclease LSEI_1131 7 None None None 116493892 Common - Transcriptional antiterminator and PTS system component IIA LSEI_0324 44 COG3711 BglG, Transcriptional antiterminator Transcription 116494308 Common - hypothetical protein LSEI_0764 41 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 116494297 Common - Kef-type K+ transport system, membrane component LSEI_0753 186 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 116494732 Nonpathogen - hypothetical protein LSEI_1239 1 None None None 116494038 Common - Homoserine trans-succinylase LSEI_0479 63 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 116494885 Common - Rossmann fold nucleotide-binding protein for DNA uptake LSEI_1399 208 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 116493577 Common - S4-like RNA binding protein LSEI_0003 39 COG2501 COG2501, Uncharacterized conserved protein Function unknown 116493781 Common - Cell division SAM-dependent methyltransferase LSEI_0210 192 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 116493941 Common - Predicted sugar phosphatase of HAD family LSEI_0375 80 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 116495586 Nonpathogen - hypothetical protein LSEI_2128 1 None None None 116495245 Common - Hemolysins related protein with CBS domains LSEI_1765 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 116495247 Common - Acetyltransferase, GNAT family LSEI_1767 71 COG2153 ElaA, Predicted acyltransferase General function prediction only 116494483 Common smpB SsrA-binding protein LSEI_0977 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 116494103 Common - hypothetical protein LSEI_0546 8 None None None 116495205 Common - hypothetical protein LSEI_1724 4 COG3679 COG3679, Uncharacterized conserved protein Function unknown 116495375 Common - Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LSEI_1909 25 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 116494655 Common - Uracil phosphoribosyltransferase LSEI_1159 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 116494936 Common - Orotidine-5'-phosphate decarboxylase LSEI_1450 159 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 116496262 Common - hypothetical protein LSEI_2844 20 COG3402 COG3402, Uncharacterized conserved protein Function unknown 116496183 Common - Protein-tyrosine-phosphatase LSEI_2761 148 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 116495090 Common - ABC-type oligopeptide transport system, periplasmic component LSEI_1608 134 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 116493859 Common - lacto-N-biosidase LSEI_0291 8 COG3525 Chb, N-acetyl-beta-hexosaminidase Carbohydrate transport and metabolism 116495607 Common - threonine synthase LSEI_2150 130 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 116494019 Common - ABC-type uncharacterized transport system, ATPase component LSEI_0458 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494525 Common - hypothetical protein LSEI_1022 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 116495381 Common - hypothetical protein LSEI_1915 4 None None None 116495694 Common - Transcriptional regulator LSEI_2241 62 COG1316 LytR, Transcriptional regulator Transcription 116495702 Common - Metal-dependent protease-like protein, putative molecular chaperone LSEI_2250 161 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 116495545 Nonpathogen - hypothetical protein LSEI_2085 1 None None None 116495911 Nonpathogen - hypothetical protein LSEI_2467 3 None None None 116495410 Common - hypothetical protein LSEI_1944 8 None None None 116494623 Common - Glycopeptide antibiotics resistance protein LSEI_1124 9 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 116495070 Common - Predicted O-methyltransferase LSEI_1588 93 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 116496192 Nonpathogen - hypothetical protein LSEI_2770 1 None None None 116494371 Common - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family LSEI_0827 197 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 116493690 Nonpathogen - hypothetical protein LSEI_0118 1 None None None 116493813 Common - ABC-type Mn/Zn transport system, ATPase component LSEI_0242 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 116493917 Common - CRISPR-associated protein LSEI_0350 8 None None None 116495158 Common - Preprotein translocase subunit YidC LSEI_1677 107 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 116494141 Common - hypothetical protein LSEI_0588 4 COG3272 COG3272, Uncharacterized conserved protein Function unknown 116494547 Nonpathogen - hypothetical protein LSEI_1045 1 None None None 116494991 Nonpathogen - hypothetical protein LSEI_1508 1 None None None 116495709 Common - DNA replication ATPase LSEI_2257 217 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 116494010 Nonpathogen - Predicted membrane protein LSEI_0447 1 COG2364 COG2364, Predicted membrane protein Function unknown 116495306 Common - Amino acid transporter LSEI_1839 95 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 116494209 Common - Glycerol uptake facilitator related permease (Major Intrinsic Protein Family) LSEI_0660 132 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 116493767 Nonpathogen - hypothetical protein LSEI_0196 1 None None None 116495686 Common - Nucleotide-binding protein implicated in inhibition of septum formation LSEI_2233 197 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 116495153 Common - Phenylalanyl-tRNA synthetase alpha subunit LSEI_1672 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 116495524 Common - ABC-type dipeptide/oligopeptide/nickel transport system, permease component LSEI_2063 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 116494434 Common - Predicted amidophosphoribosyltransferase LSEI_0927 13 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 116493723 Common - Xanthine/uracil/vitamin C permease LSEI_0151 135 COG2252 COG2252, Permeases General function prediction only 116495449 Common - Dipeptidase LSEI_1983 23 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 116493649 Common - Indole-3-glycerol phosphate synthase LSEI_0077 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 116496053 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_2625 8 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 116495475 Common - dTDP-4-dehydrorhamnose reductase LSEI_2012 175 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 116495325 Common - Citrate lyase beta subunit LSEI_1858 111 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 116494301 Common - hypothetical protein LSEI_0757 30 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 116493989 Common - Transposase, IS30 family LSEI_0425 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494008 Common - Predicted transcriptional regulator LSEI_0445 136 COG1733 COG1733, Predicted transcriptional regulators Transcription 116493889 Nonpathogen - hypothetical protein LSEI_0321 1 None None None 116493662 Nonpathogen - hypothetical protein LSEI_0090 1 None None None 116495224 Nonpathogen - hypothetical protein LSEI_1744 1 None None None 116496066 Common - Predicted hydrolase of the HAD superfamily LSEI_2639 120 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116495121 Common - 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase LSEI_1639 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 116495126 Common rpmA 50S ribosomal protein L27 LSEI_1644 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 116495560 Common - alpha-glucosidase LSEI_2102 163 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 116495918 Common - ABC-type cobalt transport system, ATPase component LSEI_2474 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 116495254 Common - tRNA (uracil-5-)-methyltransferase related enzyme LSEI_1774 199 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 116493910 Common - Transposase LSEI_0343 35 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495872 Common - Saccharopine dehydrogenase related protein LSEI_2428 45 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 116495287 Common - Pyrroline-5-carboxylate reductase LSEI_1809 211 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 116494507 Common - UDP-N-acetylmuramate dehydrogenase LSEI_1003 209 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 116494412 Common - Thiamine biosynthesis membrane-associated lipoprotein LSEI_0904 132 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 116494060 Nonpathogen - hypothetical protein LSEI_0502 1 None None None 116495908 Common - Transcriptional regulator LSEI_2464 56 COG1309 AcrR, Transcriptional regulator Transcription 116494149 Common - Transposase LSEI_0597 132 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116493796 Common - Aldo/keto reductase of diketogulonate reductase family LSEI_0225 194 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 116494416 Common - 3-carboxymuconate cyclase LSEI_0908 56 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 116494728 Nonpathogen - hypothetical protein LSEI_1234 1 None None None 116496018 Common - ABC-type uncharacterized transport system, permease component LSEI_2589 70 COG0390 COG0390, ABC-type uncharacterized transport system, permease component General function prediction only 116496289 Common - hypothetical protein LSEI_2871 23 COG4283 COG4283, Uncharacterized conserved protein Function unknown 116496239 Common - cellobiose-specific PTS system IIB component LSEI_2817 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 116495132 Common - x-prolyl-dipeptidyl aminopeptidase LSEI_1651 13 COG2936 COG2936, Predicted acyl esterases General function prediction only 116495439 Nonpathogen - hypothetical protein LSEI_1973 1 None None None 116494497 Common - hypothetical protein LSEI_0993 6 COG4894 COG4894, Uncharacterized conserved protein Function unknown 116495447 Nonpathogen - hypothetical protein LSEI_1981 1 None None None 116494127 Common - Transposase, IS30 family LSEI_0573 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493747 Common - hypothetical protein LSEI_0176 2 None None None 116495280 Common - Beta-lactamase class C related penicillin binding protein LSEI_1802 83 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 116494276 Nonpathogen - hypothetical protein LSEI_0731 1 None None None 116494667 Common - hypothetical protein LSEI_1171 186 COG0759 COG0759, Uncharacterized conserved protein Function unknown 116495853 Nonpathogen - hypothetical protein LSEI_2406 1 None None None 116496245 Common - Cyanate permease LSEI_2824 116 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 116495123 Common - hypothetical protein LSEI_1641 39 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 116495924 Common - Ribosomal protein L36 LSEI_2480 142 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 116495861 Nonpathogen - hypothetical protein LSEI_2415 1 None None None 116494527 Common - Type II secretory pathway/competence component LSEI_1024 2 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 116495973 Common - tRNA(Ile)-lysidine synthetase, MesJ LSEI_2542 195 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 116496271 Common - MoxR-like ATPase LSEI_2853 175 COG0714 COG0714, MoxR-like ATPases General function prediction only 116494177 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0627 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116496240 Common - cellobiose-specific PTS system IIA component LSEI_2818 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 116495498 Common - amylopullulanase LSEI_2035 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 116496097 Common - Transcriptional regulator LSEI_2670 118 COG1414 IclR, Transcriptional regulator Transcription 116493873 Nonpathogen - hypothetical protein LSEI_0305 1 None None None 116494393 Nonpathogen - hypothetical protein LSEI_0884 1 None None None 116495813 Common - hypothetical protein LSEI_2363 8 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116496083 Common - Transcriptional regulator LSEI_2656 78 COG1737 RpiR, Transcriptional regulators Transcription 116496309 Common - hypothetical protein LSEI_2893 18 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 116494757 Common - hypothetical protein, MraZ LSEI_1266 140 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 116495757 Common - PIN domain containing protein LSEI_2305 28 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 116496068 Nonpathogen - hypothetical protein LSEI_2641 3 None None None 116493976 Common - Conjugated bile salt hydrolase related amidase LSEI_0412 32 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 116495949 Common - phosphate-starvation-inducible protein PsiE LSEI_2505 16 COG3223 COG3223, Predicted membrane protein Function unknown 116495192 Common murC UDP-N-acetylmuramate--L-alanine ligase LSEI_1711 209 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 116495034 Common - Putative NADPH-quinone reductase (modulator of drug activity B) LSEI_1552 55 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 116493680 Nonpathogen - hypothetical protein LSEI_0108 1 None None None 116493946 Common - Predicted metal-dependent hydrolase with the TIM-barrel fold LSEI_0380 35 COG1735 Php, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 116494317 Common - Transposase LSEI_0773 138 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494274 Nonpathogen - hypothetical protein LSEI_0729 1 None None None 116495729 Common - permease of the major facilitator superfamily LSEI_2277 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495450 Common - Acyl-CoA hydrolase LSEI_1984 77 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 116495459 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_1993 22 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 116494131 Common - Na+/xyloside symporter related transporter LSEI_0578 74 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 116495738 Common - hypothetical protein LSEI_2286 3 None None None 116494090 Nonpathogen - hypothetical protein LSEI_0533 1 None None None 116493948 Common - Predicted amino acid racemase LSEI_0382 13 COG3457 COG3457, Predicted amino acid racemase Amino acid transport and metabolism 116495676 Common - Saccharopine dehydrogenase related protein LSEI_2222 16 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 116494382 Nonpathogen - hypothetical protein LSEI_0867 1 None None None 116494356 Common - Biotin operon repressor LSEI_0812 192 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 116494479 Common - Chloride channel protein EriC LSEI_0973 145 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 116493979 Nonpathogen - hypothetical protein LSEI_0415 1 None None None 116496189 Common - Amidase LSEI_2767 90 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 116494167 Common - hypothetical protein LSEI_0617 2 None None None 116495592 Common - Phosphoglycerate mutase 1 LSEI_2134 159 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 116494986 Common - DNA primase (bacterial type) LSEI_1502 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 116494880 Common - hypothetical protein LSEI_1394 12 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 116495101 Common - Thiamine pyrophosphokinase LSEI_1619 40 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 116494248 Common - Beta-glucosidase-related glycosidase LSEI_0700 117 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 116496023 Common - Ribonuclease M5 (Toprim domain) LSEI_2594 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 116495983 Nonpathogen - hypothetical protein LSEI_2552 1 None None None 116496079 Nonpathogen - hypothetical protein LSEI_2652 1 None None None 116494828 Common - Predicted GTPase LSEI_1341 195 COG0218 COG0218, Predicted GTPase General function prediction only 116493667 Common - Dihydrodipicolinate synthase/N-acetylneuraminate lyase LSEI_0095 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 116494559 Common - Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase C subunit LSEI_1057 96 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 116495656 Common - hypothetical protein LSEI_2201 5 None None None 116494618 Common - Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) LSEI_1119 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 116493894 Common - ascorbate-specific PTS system enzyme IIC LSEI_0326 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 116494097 Nonpathogen - hypothetical protein LSEI_0540 1 None None None 116494340 Common - D-alanine--poly(phosphoribitol) ligase subunit 2 LSEI_0796 12 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116495517 Common - Predicted membrane protein LSEI_2056 19 COG4708 COG4708, Predicted membrane protein Function unknown 116494237 Common - A/G-specific DNA glycosylase LSEI_0689 214 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 116493616 Common - hypothetical protein LSEI_0042 8 None None None 116493758 Nonpathogen - hypothetical protein LSEI_0187 1 None None None 116495393 Common - Transposase LSEI_1927 132 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496092 Common - mannose-specific PTS system component IID LSEI_2665 39 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 116494887 Common - DNA topoisomerase I LSEI_1401 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 116496038 Nonpathogen - hypothetical protein LSEI_2610 1 None None None 116495995 Common - hypothetical protein LSEI_2564 5 None None None 116494203 Common - Predicted iron-dependent peroxidase LSEI_0654 52 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 116494924 Common - hypothetical protein LSEI_1438 54 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 116493778 Common - Predicted dinucleotide-binding enzyme LSEI_0207 58 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 116494538 Nonpathogen - 1-acyl-sn-glycerol-3-phosphate acyltransferase LSEI_1035 1 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 116496059 Common - Transcriptional regulator LSEI_2631 184 COG0583 LysR, Transcriptional regulator Transcription 116494408 Common - hypothetical protein LSEI_0900 9 COG4116 COG4116, Uncharacterized protein conserved in bacteria Function unknown 116494708 Common - Gamma-carboxymuconolactone decarboxylase subunit-like protein LSEI_1214 73 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 116495408 Nonpathogen - Predicted transcriptional regulator LSEI_1942 2 None None None 116495811 Nonpathogen - hypothetical protein LSEI_2361 1 None None None 116494032 Common - Transcriptional regulator LSEI_0473 189 COG0583 LysR, Transcriptional regulator Transcription 116495797 Common - Transposase LSEI_2345 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495933 Common - Ribosomal protein S8 LSEI_2489 249 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 116495014 Common - Transcriptional regulator, xre family LSEI_1531 7 COG1396 HipB, Predicted transcriptional regulators Transcription 116495308 Common - acetolactate synthase LSEI_1841 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 116494821 Common - elongation factor Tu LSEI_1332 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 116494857 Common - Predicted transcriptional regulator LSEI_1371 149 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 116495720 Nonpathogen - hypothetical protein LSEI_2268 1 None None None 116493765 Common - Flavodoxin LSEI_0194 19 COG0716 FldA, Flavodoxins Energy production and conversion 116496143 Common - Transaldolase LSEI_2720 102 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 116495591 Common - ADP-ribose pyrophosphatase LSEI_2133 98 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495239 Common - Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) LSEI_1759 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 116494264 Nonpathogen - Acetoacetate decarboxylase LSEI_0716 3 COG4689 Adc, Acetoacetate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 116494047 Nonpathogen - hypothetical protein LSEI_0489 1 None None None 116495504 Common - branched-chain amino acid aminotransferase LSEI_2041 202 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 116495040 Common - Single-stranded DNA-specific exonuclease LSEI_1558 196 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 116494347 Common - Predicted membrane protein LSEI_0803 47 COG2035 COG2035, Predicted membrane protein Function unknown 116495473 Common - hypothetical protein LSEI_2010 13 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 116495950 Common - Peroxiredoxin LSEI_2506 217 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 116495156 Common - rRNA methylase LSEI_1675 208 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 116494269 Nonpathogen - hypothetical protein LSEI_0724 1 None None None 116494608 Common - hypothetical protein LSEI_1109 7 None None None 116496001 Common - UDP-N-acetylglucosamine enolpyruvyl transferase LSEI_2570 213 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 116495550 Common - Integrase LSEI_2091 65 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 116496139 Nonpathogen - hypothetical protein LSEI_2716 1 None None None 116495148 Common - Predicted membrane protein LSEI_1667 5 COG4758 COG4758, Predicted membrane protein Function unknown 116494564 Common - permease of the major facilitator superfamily LSEI_1062 34 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495045 Common - DnaJ-class molecular chaperone with C-terminal Zn finger domain LSEI_1563 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 116494495 Common - ABC-type sugar transport system, ATPase component LSEI_0991 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 116496149 Nonpathogen - hypothetical protein LSEI_2726 1 None None None 116495278 Common - hypothetical protein LSEI_1800 5 None None None 116496074 Common - Transcriptional regulator LSEI_2647 192 COG0583 LysR, Transcriptional regulator Transcription 116495050 Common - coproporphyrinogen III oxidase LSEI_1568 213 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 116494155 Nonpathogen - hypothetical protein LSEI_0603 1 None None None 116495647 Common - Trehalose PTS trehalose component IIBC LSEI_2192 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 116494013 Common - Phosphotransferase system cellobiose-specific component IIC LSEI_0450 35 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 116494384 Common - Fe2+/Zn2+ uptake regulation protein LSEI_0869 124 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 116495666 Common - permease of the drug/metabolite transporter (DMT) superfamily LSEI_2211 73 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 116493655 Nonpathogen - hypothetical protein LSEI_0083 1 None None None 116495803 Nonpathogen - hypothetical protein LSEI_2353 1 None None None 116494454 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase LSEI_0947 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 116494876 Common - hypothetical protein LSEI_1390 52 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 116495957 Common - Transposase, IS30 family LSEI_2513 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493933 Common - Mannose-specific PTS system component IICD LSEI_0366 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 116494366 Common - Predicted membrane protein LSEI_0822 9 COG4478 COG4478, Predicted membrane protein Function unknown 116494582 Common - Superfamily II DNA helicase LSEI_1081 230 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 116495185 Common - DNA replication protein LSEI_1704 38 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 116495215 Common - Arsenate reductase related protein, glutaredoxin family LSEI_1735 51 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 116494713 Common - Acetyltransferase, GNAT family LSEI_1219 8 COG0456 RimI, Acetyltransferases General function prediction only 116496228 Common - hypothetical protein LSEI_2806 8 COG4863 COG4863, Uncharacterized protein conserved in bacteria Function unknown 116493593 Nonpathogen - hypothetical protein LSEI_0019 1 None None None 116494105 Common - hypothetical protein LSEI_0548 28 COG4227 COG4227, Antirestriction protein DNA replication, recombination, and repair 116494468 Common - hypothetical protein LSEI_0961 54 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 116496269 Common - Acetyltransferase, including N-acetylase of ribosomal protein LSEI_2851 39 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 116494185 Common - Cold shock protein LSEI_0636 181 COG1278 CspC, Cold shock proteins Transcription 116494870 Common - tRNA nucleotidyltransferase/poly(A) polymerase LSEI_1384 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 116494846 Common - 5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase LSEI_1360 132 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 116494604 Common - beta-glucosides PTS, EIIBCA LSEI_1105 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 116494403 Common - Predicted phosphohydrolase LSEI_0895 20 COG1409 Icc, Predicted phosphohydrolases General function prediction only 116495574 Common - (acyl-carrier-protein) S-malonyltransferase LSEI_2116 208 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 116495625 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase LSEI_2170 34 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 116493804 Common - Glycosyltransferase related enzyme LSEI_0233 175 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116494085 Nonpathogen - hypothetical protein LSEI_0528 1 None None None 116494214 Common - galactose-1-phosphate uridylyltransferase LSEI_0666 14 COG4468 GalT, Galactose-1-phosphate uridyltransferase Carbohydrate transport and metabolism 116493658 Nonpathogen - hypothetical protein LSEI_0086 1 None None None 116493739 Common - Diadenosine tetraphosphatase related serine/threonine protein phosphatase LSEI_0167 57 COG0622 COG0622, Predicted phosphoesterase General function prediction only 116496294 Common - Transposase, IS30 family LSEI_2877 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116496296 Nonpathogen - hypothetical protein LSEI_2879 3 None None None 116494812 Common - DNA uptake protein related DNA-binding protein LSEI_1323 115 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 116495969 Common - cell surface protein LSEI_2538 7 None None None 116494877 Common - Lysophospholipase L1 related esterase LSEI_1391 18 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 116494426 Common - 3-oxoacyl-acyl carrier protein reductase LSEI_0919 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116494330 Common - hypothetical protein LSEI_0786 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 116495388 Common - hypothetical protein LSEI_1922 4 None None None 116493954 Common - permease of the major facilitator superfamily LSEI_0390 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494154 Common - ABC-type amino acid transport system, permease component LSEI_0602 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116496030 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_2601 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 116494057 Nonpathogen - hypothetical protein LSEI_0499 2 None None None 116495266 Common - Acetyl-CoA acetyltransferase LSEI_1787 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 116495481 Common - Nucleoside-diphosphate-sugar epimerase LSEI_2018 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 116495782 Nonpathogen - hypothetical protein LSEI_2330 1 None None None 116495023 Nonpathogen - hypothetical protein LSEI_1540 2 None None None 116496212 Common - Acetyltransferase, GNAT family LSEI_2790 41 COG0456 RimI, Acetyltransferases General function prediction only 116495893 Nonpathogen - hypothetical protein LSEI_2449 1 None None None 116495523 Common - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component LSEI_2062 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 116494536 Common - Lipopolysaccharide biosynthesis glycosyltransferase LSEI_1033 12 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 116494111 Nonpathogen - hypothetical protein LSEI_0554 1 None None None 116496320 Common trmE tRNA modification GTPase TrmE LSEI_2904 221 COG0486 ThdF, Predicted GTPase General function prediction only 116493888 Nonpathogen - hypothetical protein LSEI_0320 1 None None None 116496221 Common - Cation transport ATPase LSEI_2799 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 116495293 Nonpathogen - hypothetical protein LSEI_1816 1 None None None 116495268 Nonpathogen - Sugar phosphate isomerase/epimerase LSEI_1789 1 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 116496116 Common - hypothetical protein LSEI_2690 2 None None None 116494791 Nonpathogen - hypothetical protein LSEI_1300 1 None None None 116494643 Common - Phosphoglycerate mutase family protein LSEI_1146 119 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116494040 Nonpathogen - hypothetical protein LSEI_0481 1 None None None 116493705 Common - hypothetical protein LSEI_0133 5 None None None 116494977 Common - isopentenyl pyrophosphate isomerase LSEI_1493 80 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 116496044 Common - polyphosphate kinase LSEI_2616 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 116495374 Nonpathogen - hypothetical protein LSEI_1908 1 None None None 116493830 Common - hypothetical protein LSEI_0262 34 COG2966 COG2966, Uncharacterized conserved protein Function unknown 116494025 Common - hypothetical protein LSEI_0464 2 None None None 116495909 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_2465 18 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 116495416 Nonpathogen - hypothetical protein LSEI_1950 1 None None None 116494140 Common - Transposase, IS30 family LSEI_0587 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495244 Common prfC peptide chain release factor 3 LSEI_1764 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 116494849 Common - DNA polymerase III, alpha subunit LSEI_1363 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 116495464 Common - Lipid kinase from diacylglycerol kinase family LSEI_1998 113 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 116495680 Common - GMP synthase - Glutamine amidotransferase domain LSEI_2227 112 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 116495433 Common - Transcriptional regulator, xre family LSEI_1967 19 COG1476 COG1476, Predicted transcriptional regulators Transcription 116494500 Common - Phosphotransacetylase LSEI_0996 160 COG0280 Pta, Phosphotransacetylase Energy production and conversion 116494677 Common - Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme LSEI_1182 237 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 116496284 Common - Malate oxidoreductase LSEI_2866 202 COG0281 SfcA, Malic enzyme Energy production and conversion 116493966 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC LSEI_0402 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 116494150 Common - hypothetical protein LSEI_0598 25 None None None 116495610 Common - Membrane protease subunit, stomatin/prohibitin family LSEI_2153 46 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 116493678 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0106 247 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116495326 Common - citrate lyase subunit gamma LSEI_1859 26 COG3052 CitD, Citrate lyase, gamma subunit Energy production and conversion 116493981 Nonpathogen - hypothetical protein LSEI_0417 1 None None None 116495852 Nonpathogen - hypothetical protein LSEI_2405 1 None None None 116495819 Common - hypothetical protein LSEI_2369 5 None None None 116494934 Common - Phosphotransacetylase LSEI_1448 154 COG0280 Pta, Phosphotransacetylase Energy production and conversion 116493842 Common - Predicted pyrophosphatase LSEI_0274 7 COG1694 MazG, Predicted pyrophosphatase General function prediction only 116494883 Common - Predicted GTPase LSEI_1397 138 COG1161 COG1161, Predicted GTPases General function prediction only 116495695 Nonpathogen - hypothetical protein LSEI_2242 1 None None None 116495655 Common - hypothetical protein LSEI_2200 6 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 116495097 Common - RecG-like helicase LSEI_1615 218 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 116493969 Common - Phosphotransferase system, mannose/fructose-specific component IIA LSEI_0405 14 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 116496314 Common - Glycerol dehydrogenase LSEI_2898 69 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 116494840 Common - Metal-dependent hydrolase of the beta-lactamase superfamily III LSEI_1353 133 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 116494066 Common - DNA replication protein LSEI_0508 20 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 116493617 Common - Transposase, IS30 family LSEI_0043 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493861 Common - Transposase, IS30 family LSEI_0293 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495859 Common - Mn2+ and Fe2+ transporter of the NRAMP family LSEI_2413 84 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 116494665 Common - Actin-like ATPase for cell morphogenesis LSEI_1169 226 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 116493792 Common - D-alanyl-D-alanine carboxypeptidase LSEI_0221 148 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 116493943 Nonpathogen - hypothetical protein LSEI_0377 1 None None None 116494363 Common - 5'-nucleotidase/2',3'-cyclic phosphodiesterase related esterase LSEI_0819 113 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 116495299 Common - Unchracterized domain and predicted acyltransferase LSEI_1824 16 None None None 116495161 Common - Transposase, IS30 family LSEI_1680 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495344 Common - Predicted permease LSEI_1877 74 COG0730 COG0730, Predicted permeases General function prediction only 116493849 Common - Cell wall-associated hydrolase LSEI_0281 124 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 116494436 Common secA preprotein translocase subunit SecA LSEI_0929 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 116496086 Nonpathogen - Predicted holin-like toxin LSEI_2659 1 None None None 116494698 Common - Nicotinamide mononucleotide transporter LSEI_1204 12 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 116494725 Nonpathogen - hypothetical protein LSEI_1231 1 None None None 116493975 Common - ABC-type metal ion transport system, periplasmic component/surface antigen LSEI_0411 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 116494062 Nonpathogen - hypothetical protein LSEI_0504 1 None None None 116494997 Common - Recombinational DNA repair protein (RecF pathway) LSEI_1514 25 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 116493911 Common - Site-specific recombinase, DNA invertase Pin related protein LSEI_0344 126 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 116494414 Common - undecaprenyl pyrophosphate phosphatase LSEI_0906 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 116496216 Common - Di- and tricarboxylate transporter LSEI_2794 80 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 116496254 Common - Transcriptional regulator, xre family LSEI_2835 3 None None None 116493605 Nonpathogen - hypothetical protein LSEI_0031 1 None None None 116494678 Common - Fe-S cluster formation protein, NifU-like LSEI_1183 162 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 116495768 Common - Transcriptional regulator LSEI_2316 93 COG1737 RpiR, Transcriptional regulators Transcription 116493794 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase LSEI_0223 207 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 116496152 Common - sorbitol-6-phosphate 2-dehydrogenase LSEI_2729 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116493815 Common - Diadenosine tetraphosphatase related serine/threonine protein phosphatase LSEI_0244 58 COG0622 COG0622, Predicted phosphoesterase General function prediction only 116496195 Common - Beta-lactamase class C related penicillin binding protein LSEI_2773 89 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 116494834 Common - Fusion of IIA, IIB and IIC component of mannitol/fructose-specific phosphotransferase system mannitol/fructose-specific LSEI_1347 137 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 116496244 Common - permease of the major facilitator superfamily LSEI_2823 201 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494306 Nonpathogen - hypothetical protein, LysM motif LSEI_0762 1 None None None 116495539 Common - Alpha-galactosidase LSEI_2079 49 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 116495600 Common - Diacylglycerol kinase family protein LSEI_2142 81 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 116494711 Common - hypothetical protein LSEI_1217 5 None None None 116494528 Nonpathogen - Competence protein ComGC LSEI_1025 1 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 116495438 Nonpathogen - hypothetical protein LSEI_1972 1 None None None 116494452 Common - HPr kinase/phosphorylase LSEI_0945 81 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 116495572 Common - 3-oxoacyl-(acyl-carrier-protein) synthase LSEI_2114 211 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116495292 Nonpathogen - hypothetical protein LSEI_1815 1 None None None 116495703 Nonpathogen - hypothetical protein LSEI_2251 1 None None None 116494488 Common - Predicted sugar phosphatase of HAD family LSEI_0983 119 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 116495687 Common mutL DNA mismatch repair protein LSEI_2234 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 116495742 Common - Transcription antiterminator LSEI_2290 215 COG0250 NusG, Transcription antiterminator Transcription 116494291 Common - carbonyl reductase LSEI_0747 235 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 116493858 Nonpathogen - hypothetical protein LSEI_0290 3 COG1754 COG1754, Uncharacterized C-terminal domain of topoisomerase IA General function prediction only 116495102 Common - Pentose-5-phosphate-3-epimerase LSEI_1620 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 116495609 Common - aspartate kinase LSEI_2152 233 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 116495917 Common - ABC-type cobalt transport system, ATPase component LSEI_2473 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 116494147 Common - Predicted flavoprotein LSEI_0594 123 COG0431 COG0431, Predicted flavoprotein General function prediction only 116495395 Common - hypothetical protein LSEI_1929 5 None None None 116493997 Common - pyruvate oxidase LSEI_0433 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 116494341 Common - D-alanyl transfer protein LSEI_0797 13 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 116494588 Common - Flavodoxin LSEI_1087 26 COG0716 FldA, Flavodoxins Energy production and conversion 116496104 Common - Glycosyltransferase related enzyme LSEI_2677 179 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116495079 Common rplS 50S ribosomal protein L19 LSEI_1597 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 116494224 Nonpathogen - hypothetical protein LSEI_0676 2 None None None 116495678 Common - SAM-dependent methyltransferase LSEI_2225 25 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 116493831 Common - hypothetical protein LSEI_0263 49 COG3610 COG3610, Uncharacterized conserved protein Function unknown 116495507 Nonpathogen - hypothetical protein LSEI_2044 1 None None None 116493587 Nonpathogen - hypothetical protein LSEI_0013 1 None None None 116494477 Common - permease of the major facilitator superfamily LSEI_0971 146 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 116495543 Nonpathogen - hypothetical protein LSEI_2083 1 None None None 116495946 Common rplD 50S ribosomal protein L4 LSEI_2502 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 116495719 Common - Lysyl-tRNA synthetase (class II) LSEI_2267 60 COG2898 COG2898, Uncharacterized conserved protein Function unknown 116495794 Common - permease of the major facilitator superfamily LSEI_2342 182 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116493647 Common - tryptophan synthase subunit beta LSEI_0075 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 116494687 Nonpathogen - hypothetical protein LSEI_1192 1 None None None 116494458 Common - Signal transduction histidine kinase LSEI_0951 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116494720 Common - ABC-type multidrug transport system, ATPase component LSEI_1226 244 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116493631 Nonpathogen - hypothetical protein LSEI_0059 2 None None None 116496268 Common - ABC-type amino acid transport/signal transduction system, periplasmic component/domain LSEI_2850 188 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116493624 Common - 2-keto-3-deoxy-6-phosphogluconate aldolase LSEI_0051 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 116494170 Common - ABC-type multidrug transport system, ATPase component LSEI_0620 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116493715 Common - D-alanine-D-alanine ligase related ATP-grasp enzyme LSEI_0143 215 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 116494112 Nonpathogen - hypothetical protein LSEI_0556 1 None None None 116495894 Common - ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component LSEI_2450 110 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 116495338 Nonpathogen - hypothetical protein LSEI_1871 4 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 116494969 Common - Aspartyl/asparaginyl-tRNA synthetase LSEI_1485 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 116494348 Common - Small-conductance mechanosensitive channel LSEI_0804 122 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 116495349 Nonpathogen - Uncharacterized ABC transporter, permease component LSEI_1882 2 None None None 116495289 Common - Predicted phosphohydrolase LSEI_1812 7 None None None 116494738 Common - GAF domain-containing protein LSEI_1245 80 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 116495888 Nonpathogen - hypothetical protein LSEI_2444 1 None None None 116496165 Common - Transcriptional regulator/sugar kinase LSEI_2743 149 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 116494253 Common - ABC-type uncharacterized transport system, ATPase component LSEI_0705 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 116495633 Common - hypothetical protein LSEI_2178 5 None None None 116495203 Common - Parvulin-like peptidyl-prolyl isomerase LSEI_1722 69 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 116495984 Common - hypothetical protein LSEI_2553 13 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 116495357 Common - ABC-type dipeptide/oligopeptide/nickel transport system, permease component LSEI_1890 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 116493826 Common - ADP-ribosylglycohydrolase LSEI_0255 20 COG1397 DraG, ADP-ribosylglycohydrolase Posttranslational modification, protein turnover, chaperones 116493681 Common - hypothetical protein LSEI_0109 24 None None None 116494509 Common - Double-stranded beta-helix related protein LSEI_1005 95 COG1396 HipB, Predicted transcriptional regulators Transcription 116496256 Common - ABC-type amino acid transport/signal transduction system, periplasmic component/domain LSEI_2837 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116494418 Common - Ribosomal protein S14 LSEI_0910 206 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 116495322 Common - oxaloacetate decarboxylase LSEI_1855 181 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 116496224 Common - Trypsin-like serine protease with PDZ domain LSEI_2802 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 116494982 Common - 4-oxalocrotonate tautomerase LSEI_1498 31 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 116494186 Nonpathogen - hypothetical protein LSEI_0637 1 None None None 116494776 Common - 5-bromo-4-chloroindolyl phosphate hydrolysis protein LSEI_1285 3 COG4915 XpaC, 5-bromo-4-chloroindolyl phosphate hydrolysis protein General function prediction only 116494552 Nonpathogen - hypothetical protein LSEI_1050 1 None None None 116495595 Common - Beta-lactamase class C related penicillin binding protein LSEI_2137 112 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 116494581 Nonpathogen - hypothetical protein LSEI_1080 5 None None None 116494778 Nonpathogen - Small membrane protein LSEI_1287 1 None None None 116494543 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_1041 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116493712 Common - Membrane-associated phospholipid phosphatase LSEI_0140 4 None None None 116496128 Common - Fructose/tagatose bisphosphate aldolase LSEI_2704 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 116495085 Common - hypothetical protein LSEI_1603 27 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 116496177 Common - Amidase LSEI_2755 51 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 116494906 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_1420 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495176 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_1695 169 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116494258 Nonpathogen - Conserved membrane protein, GtcA family LSEI_0710 1 COG2246 COG2246, Predicted membrane protein Function unknown 116494748 Common - Cell shape-determining protein LSEI_1256 155 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 116495122 Common nusB transcription antitermination protein NusB LSEI_1640 58 COG0781 NusB, Transcription termination factor Transcription 116496232 Common - ABC-type amino acid transport system, permease and periplasmic component LSEI_2810 195 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116494863 Nonpathogen - LysM domain LSEI_1377 3 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 116494511 Common - spermidine/putrescine ABC transporter permease protein LSEI_1007 185 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 116493694 Common - Adenylosuccinate synthase LSEI_0122 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 116494741 Nonpathogen - hypothetical protein LSEI_1249 1 None None None 116494786 Common - ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member LSEI_1295 140 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 116494962 Common - Predicted N6-adenine-specific DNA methylase LSEI_1476 131 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 116494035 Common - shikimate 5-dehydrogenase LSEI_0476 223 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 116495721 Common - Transcriptional regulator LSEI_2269 125 COG1609 PurR, Transcriptional regulators Transcription 116495209 Common - Arginyl-tRNA synthetase LSEI_1728 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116495067 Common - Translation elongation factor Ts LSEI_1585 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 116496159 Common ulaA ascorbate-specific PTS system enzyme IIC LSEI_2737 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 116493803 Common - Predicted glycosyltransferse LSEI_0232 6 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 116494246 Common - Putative NADH-flavin reductase LSEI_0698 53 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 116494583 Common - Leucyl aminopeptidase (aminopeptidase T) LSEI_1082 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 116495745 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase LSEI_2293 15 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 116495751 Common - Predicted membrane protein LSEI_2299 13 COG4769 COG4769, Predicted membrane protein Function unknown 116494606 Nonpathogen - hypothetical protein LSEI_1107 1 None None None 116494771 Common ileS isoleucyl-tRNA synthetase LSEI_1280 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116494916 Common - Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase LSEI_1430 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 116496021 Common - hypothetical protein LSEI_2592 17 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 116494818 Nonpathogen - hypothetical protein LSEI_1329 1 None None None 116496303 Common - Transcriptional antiterminator LSEI_2887 25 COG3711 BglG, Transcriptional antiterminator Transcription 116494638 Common - permease of the major facilitator superfamily LSEI_1140 43 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116493737 Common - recombination factor protein RarA LSEI_0165 241 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 116495483 Common - ABC-type amino acid transport system, permease component LSEI_2020 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116495755 Common - Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase related flavin-dependent oxidoreductase LSEI_2303 84 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 116494971 Common - hypothetical protein LSEI_1487 9 COG5353 COG5353, Uncharacterized protein conserved in bacteria Function unknown 116494162 Nonpathogen - hypothetical protein LSEI_0612 1 None None None 116493660 Nonpathogen - hypothetical protein LSEI_0088 1 None None None 116495848 Nonpathogen - Prebacteriocin LSEI_2401 1 None None None 116495622 Common - Transposase LSEI_2166 61 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494059 Nonpathogen - hypothetical protein LSEI_0501 1 None None None 116494792 Nonpathogen - hypothetical protein LSEI_1301 1 None None None 116493896 Common - Fructose/tagatose bisphosphate aldolase LSEI_0328 142 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 116495282 Common nadE NAD synthetase LSEI_1804 134 COG0171 NadE, NAD synthase Coenzyme metabolism 116495624 Nonpathogen - hypothetical protein LSEI_2168 1 None None None 116493951 Common - Amino acid transporter LSEI_0385 55 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116494211 Common glpK glycerol kinase LSEI_0662 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 116494531 Nonpathogen - hypothetical protein LSEI_1028 1 COG3322 COG3322, Predicted periplasmic ligand-binding sensor domain Signal transduction mechanisms 116495016 Common - ABC-type polar amino acid transport system, ATPase component LSEI_1533 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116496043 Common - Exopolyphosphatase LSEI_2615 182 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 116495788 Common - Phosphoglycerate mutase 1 LSEI_2336 150 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 116494157 Common - hypothetical protein LSEI_0605 6 None None None 116494591 Nonpathogen - Small conserved protein LSEI_1090 1 None None None 116495145 Common - hypothetical protein LSEI_1664 7 COG4841 COG4841, Uncharacterized protein conserved in bacteria Function unknown 116494445 Common - ABC-type phosphate transport system, permease component LSEI_0938 229 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 116494314 Common - S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) LSEI_0770 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 116494078 Nonpathogen - hypothetical protein LSEI_0520 1 None None None 116495232 Common - Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain LSEI_1752 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 116495865 Common - ABC-type metal ion transport system, periplasmic component/surface adhesin LSEI_2421 171 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 116495315 Common - Superoxide dismutase LSEI_1848 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 116495186 Common - Replication initiation/membrane attachment protein LSEI_1705 15 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 116494405 Common - hypothetical protein LSEI_0897 48 COG2848 COG2848, Uncharacterized conserved protein Function unknown 116493733 Nonpathogen - hypothetical protein LSEI_0161 1 None None None 116494632 Common - Transposase, IS30 family LSEI_1133 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493883 Common - permease of the major facilitator superfamily LSEI_0315 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495961 Common - ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones LSEI_2517 226 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 116494208 Common - Uracil-DNA glycosylase LSEI_0659 56 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 116496032 Common - Methyonyl-tRNA synthetase LSEI_2603 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116494984 Common - Predicted SAM-dependent methyltransferase LSEI_1500 33 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 116494028 Common - hypothetical protein LSEI_0469 2 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 116495571 Common - Biotin carboxyl carrier protein LSEI_2113 170 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 116494222 Nonpathogen - hypothetical protein LSEI_0674 1 None None None 116494386 Common - S-adenosylmethionine synthetase LSEI_0877 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 116493762 Nonpathogen - hypothetical protein LSEI_0191 1 None None None 116495382 Common - Transposase, IS30 family LSEI_1916 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495645 Common - Transposase, IS30 family LSEI_2190 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495025 Common - Ribosomal protein L11 methylase LSEI_1542 177 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 116493936 Common - mannose-6-phosphate isomerase LSEI_0369 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 116496101 Common - Predicted DNA alkylation repair enzyme LSEI_2674 18 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 116495274 Common - hypothetical protein LSEI_1796 12 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 116493828 Common - Methylase for ubiquinone/menaquinone biosynthesis LSEI_0257 6 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 116493840 Common - Transposase LSEI_0272 60 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496095 Common - Glucuronyl hydrolase LSEI_2668 21 COG4225 COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins General function prediction only 116494124 Common - Adenine specific DNA methylase Mod LSEI_0570 10 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 116495276 Common - Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component LSEI_1798 46 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 116494071 Nonpathogen - hypothetical protein LSEI_0513 1 None None None 116496015 Common - Glycopeptide antibiotics resistance protein LSEI_2586 9 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 116495837 Nonpathogen - hypothetical protein LSEI_2390 1 None None None 116495616 Nonpathogen - hypothetical protein LSEI_2159 1 None None None 116496278 Common - Glycosyltransferase LSEI_2860 175 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 116495043 Nonpathogen - hypothetical protein LSEI_1561 1 None None None 116494216 Common - aldose 1-epimerase LSEI_0668 90 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 116496138 Common - hypothetical protein LSEI_2715 11 None None None 116494645 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_1148 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116496292 Common - hypothetical protein LSEI_2874 12 None None None 116494050 Nonpathogen - hypothetical protein LSEI_0492 2 None None None 116494874 Common - Dihydrofolate reductase LSEI_1388 145 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 116494263 Common - Short-chain alcohol dehydrogenase LSEI_0715 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 116496213 Common - Acetyltransferase, GNAT family LSEI_2791 41 COG3153 COG3153, Predicted acetyltransferase General function prediction only 116494272 Nonpathogen - hypothetical protein LSEI_0727 1 None None None 116495968 Common - cell surface protein LSEI_2537 7 None None None 116494286 Common - Malate permease LSEI_0741 38 COG0679 COG0679, Predicted permeases General function prediction only 116493847 Common - phosphopentomutase LSEI_0279 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 116494951 Nonpathogen - hypothetical protein LSEI_1465 1 None None None 116494456 Common - Phosphomannomutase LSEI_0949 237 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 116493806 Common - Mannosyltransferase OCH1 related enzyme LSEI_0235 9 COG3774 OCH1, Mannosyltransferase OCH1 and related enzymes Cell envelope biogenesis, outer membrane 116494391 Common - Membrane-associated phospholipid phosphatase LSEI_0882 53 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 116493780 Nonpathogen - hypothetical protein LSEI_0209 1 None None None 116495793 Common - phosphopentomutase LSEI_2341 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 116495222 Common - Organic radical activating enzyme LSEI_1742 54 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 116495781 Common - Aminopeptidase C LSEI_2329 17 COG3579 PepC, Aminopeptidase C Amino acid transport and metabolism 116494179 Common - Transcriptional regulator LSEI_0629 93 COG2188 PhnF, Transcriptional regulators Transcription 116494232 Common - DNA repair ATPase LSEI_0684 112 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 116495133 Common - Glutamine synthetase LSEI_1652 231 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 116494249 Common - ABC-type uncharacterized transport system, periplasmic component LSEI_0701 54 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 116494235 Common - Molecular chaperone (small heat shock protein) LSEI_0687 140 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 116495495 Common - Predicted Co/Zn/Cd cation transporter LSEI_2032 207 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 116494855 Common - RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family LSEI_1369 6 None None None 116495990 Nonpathogen - hypothetical protein LSEI_2559 2 None None None 116495515 Common - dTDP-D-glucose 4,6-dehydratase LSEI_2054 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 116494229 Common - lactose transport regulator LSEI_0681 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 116493756 Common - Predicted FAD(NAD)-dependent oxidoreductase LSEI_0185 17 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 116494353 Common - catabolite control protein A LSEI_0809 129 COG1609 PurR, Transcriptional regulators Transcription 116494750 Common - Septum formation inhibitor LSEI_1258 12 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 116495997 Common - hypothetical protein LSEI_2566 11 None None None 116495406 Common - hypothetical protein LSEI_1940 3 None None None 116495580 Nonpathogen - hypothetical protein LSEI_2122 1 None None None 116496090 Nonpathogen - Preprotein translocase subunit YajC LSEI_2663 4 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 116494333 Common - Stimulator of FtsZ polymerization and component of cell-division Z-ring LSEI_0789 4 None None None 116494255 Common - Cation transport ATPase LSEI_0707 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116493708 Common - FAD/FMN-containing dehydrogenase LSEI_0136 38 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 116494702 Common - Signal transduction histidine kinase LSEI_1208 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116496077 Common - Uncharacterized membrane protein, possible Na+ channel or pump LSEI_2650 48 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 116494300 Common - hydrolase of the alpha/beta superfamily LSEI_0756 50 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 116494219 Common - Phosphotransferase system galacitol-specific IIA domain (Ntr-type) LSEI_0671 17 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 116493722 Common - hypothetical protein LSEI_0150 2 None None None 116495935 Common rplE 50S ribosomal protein L5 LSEI_2491 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 116494999 Common - Cytidine deaminase LSEI_1516 115 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 116493776 Common - Predicted membrane protein LSEI_0205 27 COG3817 COG3817, Predicted membrane protein Function unknown 116496133 Common - hypothetical protein LSEI_2710 56 COG1434 COG1434, Uncharacterized conserved protein Function unknown 116495472 Common - Transposase, IS30 family LSEI_2008 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495116 Common - Arginine repressor LSEI_1634 52 COG1438 ArgR, Arginine repressor Transcription 116495257 Common - Transcriptional regulator LSEI_1777 81 COG2188 PhnF, Transcriptional regulators Transcription 116495009 Common - Aspartyl-tRNA synthetase LSEI_1526 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116493789 Nonpathogen - hypothetical protein LSEI_0218 1 None None None 116493926 Nonpathogen - hypothetical protein LSEI_0359 1 None None None 116494171 Common - Predicted membrane protein LSEI_0621 4 COG4720 COG4720, Predicted membrane protein Function unknown 116494629 Nonpathogen - hypothetical protein LSEI_1130 1 None None None 116494049 Nonpathogen - hypothetical protein LSEI_0491 1 None None None 116495810 Nonpathogen - hypothetical protein LSEI_2360 1 None None None 116494928 Common - 2-dehydropantoate 2-reductase LSEI_1442 118 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 116494570 Common - Transposase LSEI_1068 57 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495301 Common - hypothetical protein LSEI_1828 2 None None None 116494398 Common - NUDIX family hydrolase LSEI_0889 8 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495261 Common - cellobiose-specific PTS system IIB component LSEI_1782 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 116496069 Nonpathogen - hypothetical protein LSEI_2642 1 None None None 116495002 Common - Phosphate starvation-inducible protein PhoH, predicted ATPase LSEI_1519 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 116494440 Common - Trypsin-like serine protease with PDZ domain LSEI_0933 5 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 116494763 Common - UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase LSEI_1272 209 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 116496072 Common - Predicted hydrolase of the HAD superfamily LSEI_2645 116 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116495166 Common - SAM-dependent methyltransferase LSEI_1685 56 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 116495822 Common - hypothetical protein LSEI_2372 4 None None None 116494992 Common - Transposase LSEI_1509 55 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494465 Common - hypothetical protein LSEI_0958 39 COG3247 HdeD, Uncharacterized conserved protein Function unknown 116496178 Common - hypothetical protein LSEI_2756 3 None None None 116494283 Common - Mg2+ and Co2+ transporter LSEI_0738 29 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 116493619 Common - Predicted membrane protein LSEI_0046 19 COG4392 COG4392, Predicted membrane protein Function unknown 116493787 Common - Uncharacterized membrane-bound protein conserved in bacteria LSEI_0216 7 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 116495458 Common - Phosphoglycerate mutase family protein LSEI_1992 139 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116496171 Common - permease of the major facilitator superfamily LSEI_2749 90 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116496041 Nonpathogen - hypothetical protein LSEI_2613 1 None None None 116495369 Nonpathogen - hypothetical protein LSEI_1903 1 None None None 116494691 Common - hypothetical protein LSEI_1197 8 COG5506 COG5506, Uncharacterized conserved protein Function unknown 116495501 Common - ADP-glucose pyrophosphorylase LSEI_2038 58 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 116494192 Nonpathogen - hypothetical protein LSEI_0643 1 None None None 116495062 Common - Predicted membrane-associated Zn-dependent protease 1 LSEI_1580 215 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 116496182 Common - Glycerophosphoryl diester phosphodiesterase LSEI_2760 167 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 116494242 Common - hypothetical protein LSEI_0694 4 COG4832 COG4832, Uncharacterized conserved protein Function unknown 116495456 Common - Mn2+ and Fe2+ transporter of the NRAMP family LSEI_1990 95 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 116494400 Common - Glycosyltransferase LSEI_0892 207 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 116494681 Nonpathogen - hypothetical protein LSEI_1186 1 None None None 116493970 Common - Trehalose-6-phosphate hydrolase LSEI_0406 165 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 116495724 Common - Ribosomal protein L7/L12 LSEI_2272 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 116494030 Common - Amino acid transporter LSEI_0471 35 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116494625 Common - Glucose-6-phosphate isomerase LSEI_1126 202 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 116495971 Common - ATP-dependent Zn protease LSEI_2540 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 116495107 Common - Methionyl-tRNA formyltransferase LSEI_1625 216 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 116495557 Common - hypothetical protein LSEI_2099 6 COG3371 COG3371, Predicted membrane protein Function unknown 116493610 Nonpathogen - hypothetical protein LSEI_0036 1 None None None 116495362 Nonpathogen - hypothetical protein LSEI_1895 1 None None None 116496060 Common - Tellurite resistance protein related permease LSEI_2632 34 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 116495055 Common - Translation initiation factor 2 (IF-2; GTPase) LSEI_1573 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 116495955 Common - Predicted outer membrane protein LSEI_2511 11 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116494134 Nonpathogen - hypothetical protein LSEI_0581 1 None None None 116495875 Common - Predicted outer membrane protein LSEI_2431 7 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116495863 Common - Putative multicopper oxidase LSEI_2417 108 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 116494768 Common - Cell division membrane protein LSEI_1277 43 COG0762 COG0762, Predicted integral membrane protein Function unknown 116494617 Common - Xanthine/uracil permease LSEI_1118 139 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 116494909 Common - Acetyltransferase, GNAT family LSEI_1423 20 COG0456 RimI, Acetyltransferases General function prediction only 116494995 Nonpathogen - hypothetical protein LSEI_1512 1 None None None 116495207 Common - Pseudouridylate synthase, 23S RNA-specific LSEI_1726 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 116493580 Common - DNA gyrase, A subunit LSEI_0006 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 116494145 Common - Thiamine biosynthesis membrane-associated lipoprotein LSEI_0592 122 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 116494723 Common - hypothetical protein LSEI_1229 4 None None None 116493710 Common - hypothetical protein LSEI_0138 5 None None None 116495386 Common - hypothetical protein LSEI_1920 6 None None None 116494093 Nonpathogen - hypothetical protein LSEI_0536 1 None None None 116494189 Common - Predicted nucleoside-diphosphate-sugar epimerase LSEI_0640 56 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 116494593 Common - Phosphomevalonate kinase LSEI_1092 45 COG1577 ERG12, Mevalonate kinase Lipid metabolism 116495195 Common - Thiol-disulfide isomerase and thioredoxin LSEI_1714 103 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 116493967 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID LSEI_0403 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 116494447 Common - ABC-type phosphate transport system, ATPase component LSEI_0940 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 116494802 Common - Stress response membrane GTPase LSEI_1313 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 116494304 Common - alpha/beta hydrolase superfamily protein LSEI_0760 9 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 116493977 Common - Transposase LSEI_0413 136 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494438 Common - Cell division ATPase LSEI_0931 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 116495614 Common - Aspartate/tyrosine/aromatic aminotransferase LSEI_2157 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 116496102 Common - ribose-5-phosphate isomerase A LSEI_2675 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 116494736 Common - Transcriptional regulator, xre family LSEI_1243 47 COG1395 COG1395, Predicted transcriptional regulator Transcription 116495017 Common - Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase LSEI_1534 15 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 116494251 Common - ABC-type uncharacterized transport system, periplasmic component LSEI_0703 53 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 116493584 Common - Single-stranded DNA-binding protein LSEI_0010 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 116496252 Common - Transcriptional regulator, xre family LSEI_2833 2 None None None 116493622 Common - Predicted metal-dependent membrane protease LSEI_0049 32 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 116495529 Common - Iron-binding oxidase subunit LSEI_2069 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 116495903 Nonpathogen - hypothetical protein LSEI_2459 3 None None None 116494964 Common - hypothetical protein LSEI_1479 11 COG4474 COG4474, Uncharacterized protein conserved in bacteria Function unknown 116496197 Common - Transcriptional regulator LSEI_2775 97 COG1737 RpiR, Transcriptional regulators Transcription 116493603 Common - Transcriptional regulator LSEI_0029 69 COG1309 AcrR, Transcriptional regulator Transcription 116494946 Common - Formyltetrahydrofolate synthetase LSEI_1460 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 116495596 Common - Predicted permease LSEI_2138 26 COG0628 PerM, Predicted permease General function prediction only 116494064 Nonpathogen - hypothetical protein LSEI_0506 1 None None None 116495124 Common - Translation elongation factor P LSEI_1642 218 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 116494521 Common - hypothetical protein LSEI_1017 20 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 116494433 Common - Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) LSEI_0926 74 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 116495155 Common - Predicted HD superfamily hydrolase LSEI_1674 11 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 116493913 Nonpathogen - hypothetical protein LSEI_0346 3 None None None 116494807 Common - Phosphopantetheine adenylyltransferase LSEI_1318 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 116495372 Common - Transposase LSEI_1906 35 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495485 Common - ABC-type polar amino acid transport system, ATPase component LSEI_2022 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 116495119 Common - Exonuclease VII small subunit LSEI_1637 89 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 116496062 Common - Predicted HD superfamily hydrolase LSEI_2635 61 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 116495443 Nonpathogen - hypothetical protein LSEI_1977 1 None None None 116495541 Common - DNA-binding response regulator, CitB family (Rec-wHTH domains) LSEI_2081 18 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 116495414 Nonpathogen - hypothetical protein LSEI_1948 1 None None None 116494513 Common - Spermidine/putrescine-binding periplasmic protein LSEI_1009 136 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 116493999 Common - L-alanine-DL-glutamate epimerase related enzyme of enolase superfamily LSEI_0436 129 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 116494450 Nonpathogen - hypothetical protein LSEI_0943 1 None None None 116496230 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_2808 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116496266 Common - ABC-type polar amino acid transport system, ATPase component LSEI_2848 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 116493817 Common - oligoendopeptidase F LSEI_0246 85 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 116495032 Common - Acetyltransferase, GNAT family LSEI_1549 5 None None None 116494369 Common - Phosphatidylglycerophosphatase A related protein LSEI_0825 14 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 116496198 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB LSEI_2776 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 116496242 Common - ADP-ribose pyrophosphatase LSEI_2820 62 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116493856 Common - Rad3-related DNA helicase LSEI_0288 100 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 116494023 Common - ABC-type metal ion transport system, ATPase component LSEI_0462 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494407 Common - Dithiol-disulfide isomerase LSEI_0899 6 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 116495230 Common - Glutamine phosphoribosylpyrophosphate amidotransferase LSEI_1750 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 116493727 Common - hypothetical protein LSEI_0155 5 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 116493638 Common - ABC-type proline/glycine betaine transport system, ATPase component LSEI_0066 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 116494940 Common - Dihydroorotase LSEI_1454 215 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 116496046 Common - Predicted oxidoreductase LSEI_2618 200 COG4989 COG4989, Predicted oxidoreductase General function prediction only 116494068 Common - hypothetical protein LSEI_0510 4 None None None 116494794 Common - acetoin dehydrogenase complex, E1 component, alpha subunit LSEI_1305 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 116495705 Common - L-asparaginase LSEI_2253 139 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 116494188 Common - ATPase component of ABC transporter with duplicated ATPase domains LSEI_0639 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 116494908 Common - Acetyltransferase, GNAT family LSEI_1422 14 COG0456 RimI, Acetyltransferases General function prediction only 116494014 Nonpathogen - hypothetical protein LSEI_0451 1 None None None 116496050 Common - Beta-propeller domains of methanol dehydrogenase type LSEI_2622 80 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 116494697 Common - Short-chain alcohol dehydrogenase LSEI_1203 217 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116495360 Common - Putative intracellular protease/amidase LSEI_1893 80 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 116495520 Common - Transcriptional regulator, xre family LSEI_2059 19 COG1396 HipB, Predicted transcriptional regulators Transcription 116495850 Nonpathogen - hypothetical protein LSEI_2403 1 None None None 116495220 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_1740 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495250 Nonpathogen - hypothetical protein LSEI_1770 1 None None None 116495857 Nonpathogen - hypothetical protein LSEI_2411 1 None None None 116496261 Nonpathogen - hypothetical protein LSEI_2843 1 None None None 116495915 Common truA tRNA pseudouridine synthase A LSEI_2471 236 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 116494151 Common - Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LSEI_0599 9 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 116494881 Common - Periplasmic protease LSEI_1395 183 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 116494502 Nonpathogen - hypothetical protein LSEI_0998 1 None None None 116495431 Nonpathogen - hypothetical protein LSEI_1965 1 None None None 116493983 Common - hypothetical protein LSEI_0419 26 COG3412 COG3412, Uncharacterized protein conserved in bacteria Function unknown 116495087 Common - Signal recognition particle GTPase LSEI_1605 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 116496112 Common - Alpha-glucosidase, family 31 of glycosyl hydrolase LSEI_2686 12 None None None 116495284 Common - nicotinate phosphoribosyltransferase LSEI_1806 123 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 116493790 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_0219 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116493863 Common - ABC-type cobalt transport system, ATPase component LSEI_0295 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 116495201 Common - Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase LSEI_1720 234 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 116493701 Common - ABC-type multidrug transport system, ATPase component LSEI_0129 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494554 Common - Lysophospholipase L1 related esterase LSEI_1052 9 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 116496218 Common - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase LSEI_2796 96 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116494980 Nonpathogen - Predicted SAM-dependent methyltransferase LSEI_1496 4 None None None 116493972 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0408 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116496274 Common - Transposase, IS30 family LSEI_2856 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495324 Common - Citrate lyase, alpha subunit LSEI_1857 29 COG3051 CitF, Citrate lyase, alpha subunit Energy production and conversion 116495027 Common - 3-methyladenine DNA glycosylase LSEI_1544 80 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 116493644 Nonpathogen - DNA-binding ferritin-like protein (oxidative damage protectant) LSEI_0072 5 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 116495844 Nonpathogen - hypothetical protein LSEI_2397 1 None None None 116495921 Common - DNA-directed RNA polymerase subunit alpha LSEI_2477 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 116493578 Common - Recombinational DNA repair ATPase (RecF pathway) LSEI_0004 166 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 116495928 Common - Ribosomal protein L15 LSEI_2484 215 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 116493986 Nonpathogen - hypothetical protein LSEI_0422 1 None None None 116494869 Common - hypothetical protein LSEI_1383 66 COG1284 COG1284, Uncharacterized conserved protein Function unknown 116493596 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_0022 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116495641 Common - Dipeptidase LSEI_2186 23 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 116493742 Common - Transcriptional regulator LSEI_0171 9 COG1309 AcrR, Transcriptional regulator Transcription 116496229 Common - Signal transduction histidine kinase LSEI_2807 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 116496324 Common - RNase P protein component LSEI_2908 47 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 116496011 Common - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase LSEI_2581 162 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116494443 Common - ABC-type phosphate transport system, periplasmic component LSEI_0936 159 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 116494889 Common - Integrase LSEI_1403 230 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 116496126 Common - hypothetical protein LSEI_2702 58 COG0432 COG0432, Uncharacterized conserved protein Function unknown 116494575 Common - hypothetical protein LSEI_1073 6 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 116494956 Nonpathogen - hypothetical protein LSEI_1470 1 None None None 116495877 Common - ABC-type metal ion transport system, periplasmic component/surface adhesin LSEI_2433 162 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 116494004 Common - Amino acid transporter LSEI_0441 162 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116495731 Common - Ribosomal protein L1 LSEI_2279 247 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 116494987 Common - Glycyl-tRNA synthetase, beta subunit LSEI_1503 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 116494788 Common - Diacylglycerol kinase family protein LSEI_1297 96 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 116495052 Common - Pseudouridine synthase LSEI_1570 244 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 116494662 Common - F0F1 ATP synthase subunit beta LSEI_1166 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 116494284 Common - malolactic fermentation system transcription activator LSEI_0739 185 COG0583 LysR, Transcriptional regulator Transcription 116495419 Nonpathogen - hypothetical protein LSEI_1953 1 None None None 116494372 Common - RNA binding protein (S1 domain) LSEI_0828 235 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 116495892 Common - ABC-type phosphate/phosphonate transport system, permease component LSEI_2448 116 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 116494861 Common - hypothetical protein LSEI_1375 4 COG4955 COG4955, Uncharacterized protein conserved in bacteria Function unknown 116494088 Common - hypothetical protein LSEI_0531 27 None None None 116495602 Common - ABC-type proline/glycine betaine transport system, ATPase component LSEI_2145 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 116494201 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_0652 156 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116494411 Common - Pseudouridylate synthase, 23S RNA-specific LSEI_0903 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 116494701 Common - ABC-type oligopeptide transport system, periplasmic component LSEI_1207 182 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 116495065 Common - Ribosome recycling factor LSEI_1583 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 116495174 Common - Lactoylglutathione lyase related lyase LSEI_1693 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 116496249 Common - mannose-specific PTS system component IIC LSEI_2828 33 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 116495899 Common - ABC-type uncharacterized transport system, permease component LSEI_2455 31 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 116495548 Nonpathogen - hypothetical protein LSEI_2088 1 None None None 116494486 Common - alpha-glucosidase LSEI_0980 171 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 116495259 Common - hypothetical protein LSEI_1780 3 None None None 116494669 Common - cell division membrane protein LSEI_1173 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 116496312 Common - Adhesion exoprotein LSEI_2896 51 None None None 116495638 Common - threonine dehydratase LSEI_2183 231 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 116494075 Common - hypothetical protein LSEI_0517 6 None None None 116495057 Common - Predicted nucleic-acid-binding protein implicated in transcription termination LSEI_1575 30 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 116495077 Common - hypothetical protein LSEI_1595 15 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 116495404 Nonpathogen - hypothetical protein LSEI_1938 1 None None None 116495886 Common - Integral membrane protein for chromosome condensation LSEI_2442 74 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 116494900 Common - Inorganic pyrophosphatase/exopolyphosphatase LSEI_1414 57 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 116494298 Common - Predicted phosphatase LSEI_0754 150 COG0546 Gph, Predicted phosphatases General function prediction only 116493833 Common - ABC-type branched-chain amino acid transport system, periplasmic component LSEI_0265 146 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 116494675 Common - Fe-S cluster assembly ABC-type transport system, ATPase component LSEI_1180 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 116494226 Common - tagatose 1,6-diphosphate aldolase LSEI_0678 26 COG3684 LacD, Tagatose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 116494042 Common - Transposase LSEI_0483 132 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494929 Common - acetoin/pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase LSEI_1443 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 116493964 Common - Sugar metabolism regulatory protein, HTH and periplasmic binding domains LSEI_0400 126 COG1609 PurR, Transcriptional regulators Transcription 116496115 Common - Transposase, IS30 family LSEI_2689 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493871 Common - Amino acid transporter LSEI_0303 62 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116495331 Nonpathogen - hypothetical protein LSEI_1864 1 None None None 116494293 Common - Cation transport ATPase LSEI_0749 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116495717 Nonpathogen - hypothetical protein LSEI_2265 1 None None None 116496150 Common - Transposase, IS30 family LSEI_2727 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494810 Common - Transposase LSEI_1321 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495355 Nonpathogen - hypothetical protein LSEI_1888 1 None None None 116494830 Nonpathogen - hypothetical protein LSEI_1343 1 None None None 116493824 Nonpathogen - hypothetical protein LSEI_0253 1 None None None 116494422 Common - hypothetical protein LSEI_0915 5 COG4835 COG4835, Uncharacterized protein conserved in bacteria Function unknown 116495631 Common - ABC-type multidrug transport system, ATPase component LSEI_2176 242 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116496180 Nonpathogen - hypothetical protein LSEI_2758 1 None None None 116495242 Common - ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones LSEI_1762 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 116495347 Common - Predicted transcriptional regulator LSEI_1880 119 COG1725 COG1725, Predicted transcriptional regulators Transcription 116496163 Common - Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) LSEI_2741 111 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 116496208 Common - Histidinol phosphatase related phosphatase LSEI_2786 114 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 116494560 Common - Asp-tRNA-Asn/Glu-tRNA-Gln amidotransferase A subunit LSEI_1058 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 116495342 Common - Transcriptional regulator LSEI_1875 38 COG1309 AcrR, Transcriptional regulator Transcription 116494824 Common - Transposase, IS30 family LSEI_1336 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495712 Nonpathogen - hypothetical protein LSEI_2260 1 None None None 116494832 Common - ABC-type polar amino acid transport system, ATPase component LSEI_1345 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 116493919 Common - CRISPR-associated protein LSEI_0352 42 None None None 116495697 Common - redox-sensing transcriptional repressor Rex LSEI_2245 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 116495986 Common gltD glutamate synthase subunit beta LSEI_2555 192 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 116494742 Common - redox-sensing transcriptional repressor Rex LSEI_1250 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 116495213 Common - Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase LSEI_1733 68 COG4781 COG4781, Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase Energy production and conversion 116495219 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_1739 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116493938 Common - Transcriptional regulator LSEI_0371 63 COG1737 RpiR, Transcriptional regulators Transcription 116493785 Common - hypothetical protein LSEI_0214 27 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 116494194 Common - hypothetical protein LSEI_0645 3 None None None 116495384 Nonpathogen - hypothetical protein LSEI_1918 2 None None None 116493621 Nonpathogen - hypothetical protein LSEI_0048 1 None None None 116494860 Common - Ferredoxin LSEI_1374 6 COG1141 Fer, Ferredoxin Energy production and conversion 116494173 Nonpathogen - hypothetical protein LSEI_0623 1 None None None 116495988 Common - Predicted membrane protein LSEI_2557 12 COG4708 COG4708, Predicted membrane protein Function unknown 116495526 Common - ABC-type oligopeptide transport system, periplasmic component LSEI_2065 187 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 116495272 Common - Predicted membrane protein LSEI_1793 9 COG4684 COG4684, Predicted membrane protein Function unknown 116495290 Common - Dipeptide/tripeptide permease LSEI_1813 82 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 116495181 Nonpathogen - hypothetical protein LSEI_1700 1 None None None 116495297 Nonpathogen - hypothetical protein LSEI_1821 1 None None None 116496264 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_2846 33 COG3910 COG3910, Predicted ATPase General function prediction only 116496184 Common - ABC-type sugar transport system, periplasmic component LSEI_2762 93 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 116495041 Nonpathogen - hypothetical protein LSEI_1559 1 None None None 116494122 Common - hypothetical protein LSEI_0568 13 None None None 116494752 Common - ABC-type polar amino acid transport system, ATPase component LSEI_1261 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 116493772 Nonpathogen - hypothetical protein LSEI_0201 1 None None None 116494647 Nonpathogen - Predicted flavoprotein LSEI_1150 3 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 116494989 Nonpathogen - Transcriptional regulator, xre family LSEI_1506 1 COG1709 COG1709, Predicted transcriptional regulator Transcription 116494081 Common - Transposase LSEI_0524 131 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494053 Nonpathogen - hypothetical protein LSEI_0495 1 None None None 116495620 Nonpathogen - hypothetical protein LSEI_2163 1 None None None 116495826 Nonpathogen - Xre-like reg LSEI_2376 2 None None None 116495428 Nonpathogen - hypothetical protein LSEI_1962 1 None None None 116496276 Nonpathogen - hypothetical protein LSEI_2858 1 None None None 116493808 Common - Transposase LSEI_0237 57 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494261 Nonpathogen - hypothetical protein LSEI_0713 2 COG4918 COG4918, Uncharacterized protein conserved in bacteria Function unknown 116495136 Common - Cystathionine beta-lyase family protein LSEI_1655 50 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 116494850 Common - 6-phosphofructokinase LSEI_1364 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 116494953 Common - Glutaredoxin related protein LSEI_1467 38 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 116495236 Common - Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase LSEI_1756 226 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 116494135 Common - Nitroreductase LSEI_0582 68 COG0778 NfnB, Nitroreductase Energy production and conversion 116495397 Nonpathogen - hypothetical protein LSEI_1931 1 None None None 116493654 Nonpathogen - hypothetical protein LSEI_0082 1 None None None 116496305 Common - Glucosamine-6-phosphate isomerase LSEI_2889 79 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 116496034 Common - ADP-ribose pyrophosphatase LSEI_2606 4 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495978 Common - Transcription-repair coupling factor (superfamily II helicase) LSEI_2547 232 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 116493671 Common - aspartate kinase LSEI_0099 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 116495660 Common - Cytochrome bd-type quinol oxidase, subunit 1 LSEI_2205 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 116496004 Common - DNA-directed RNA polymerase subunit delta LSEI_2573 14 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 116493666 Common - Dihydrodipicolinate reductase LSEI_0094 208 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 116494585 Common - Transcriptional regulator LSEI_1084 14 COG1309 AcrR, Transcriptional regulator Transcription 116494816 Common - Ribosomal protein S20 LSEI_1327 114 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 116495806 Common - permease of the major facilitator superfamily LSEI_2356 166 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495182 Nonpathogen - hypothetical protein LSEI_1701 1 None None None 116495906 Common - Ribosomal protein S9 LSEI_2462 247 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 116495188 Common - Dephospho-CoA kinase LSEI_1707 205 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 116495753 Nonpathogen - hypothetical protein LSEI_2301 1 None None None 116494898 Common - Pyruvate-formate lyase-activating enzyme LSEI_1412 87 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 116494918 Common hisB imidazoleglycerol-phosphate dehydratase LSEI_1432 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 116493735 Common - Predicted membrane protein LSEI_0163 4 COG3152 COG3152, Predicted membrane protein Function unknown 116496236 Common - hypothetical protein LSEI_2814 4 None None None 116494101 Nonpathogen - hypothetical protein LSEI_0544 1 None None None 116495786 Common - pyruvate phosphate dikinase LSEI_2334 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 116495479 Common - hypothetical protein LSEI_2016 2 None None None 116495143 Common - Cell division protein FtsI/penicillin-binding protein 2 LSEI_1662 196 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 116493958 Common - Transcriptional regulator LSEI_0394 14 COG1309 AcrR, Transcriptional regulator Transcription 116494076 Nonpathogen - hypothetical protein LSEI_0518 1 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 116495653 Nonpathogen - hypothetical protein LSEI_2198 1 None None None 116496058 Common - Superfamily I DNA and RNA helicase LSEI_2630 37 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 116495162 Common - 6-phosphogluconate dehydrogenase LSEI_1681 185 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 116496013 Common - hypothetical protein LSEI_2583 8 COG4043 COG4043, Uncharacterized conserved protein Function unknown 116494374 Common - Transposase LSEI_0858 61 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495421 Nonpathogen - hypothetical protein LSEI_1955 2 None None None 116495883 Nonpathogen - hypothetical protein LSEI_2439 1 None None None 116494109 Nonpathogen - hypothetical protein LSEI_0552 2 None None None 116495565 Common - Predicted nucleoside-diphosphate-sugar epimerase LSEI_2107 90 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 116494312 Common - Holliday junction resolvasome, DNA-binding subunit LSEI_0768 207 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 116495114 Nonpathogen - hypothetical protein LSEI_1632 1 None None None 116494973 Common - ATP-dependent exoDNAse (exonuclease V) beta subunit LSEI_1489 228 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 116496222 Common - Molecular chaperone (small heat shock protein) LSEI_2800 139 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 116494491 Common - Predicted hydrolase of the metallo-beta-lactamase superfamily LSEI_0987 60 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 116495569 Common - Biotin carboxylase LSEI_2111 233 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 116495890 Common - ABC-type phosphate/phosphonate transport system, ATPase component LSEI_2446 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 116495897 Common - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component LSEI_2453 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 116494017 Common - Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain LSEI_0455 10 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116494026 Common - Uncharacterized conserved membrane associated protein LSEI_0465 36 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 116496319 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA LSEI_2903 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 116494765 Common - ATPase for cell division LSEI_1274 180 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 116495748 Common - hypothetical protein LSEI_2296 10 COG4939 COG4939, Major membrane immunogen, membrane-anchored lipoprotein Function unknown 116494044 Common - Integrase LSEI_0486 108 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 116495817 Nonpathogen - hypothetical protein LSEI_2367 2 None None None 116496173 Common - Acetyltransferase, GNAT family LSEI_2751 62 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 116493853 Common - Uncharacterized NAD(FAD)-dependent dehydrogenase LSEI_0285 237 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 116495367 Common - hypothetical protein LSEI_1901 5 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 116495173 Common - Lactoylglutathione lyase related lyase LSEI_1692 36 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 116495263 Common - Pyruvate oxidase or other thiamine pyrophosphate-requiring enzyme LSEI_1784 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 116495846 Common - Predicted metal-dependent membrane protease LSEI_2399 18 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 116495734 Common - Amidase family enzyme LSEI_2282 217 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 116493601 Common - Predicted integral membrane protein LSEI_0027 32 COG3548 COG3548, Predicted integral membrane protein Function unknown 116494990 Nonpathogen - hypothetical protein LSEI_1507 1 None None None 116493908 Common - Mg2+ and Co2+ transporter LSEI_0340 61 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 116495454 Common - prolyl aminopeptidase LSEI_1988 68 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 116493898 Common - Predicted transcriptional regulator LSEI_0330 30 COG1378 COG1378, Predicted transcriptional regulators Transcription 116495317 Common - Esterase/lipase LSEI_1850 74 COG0657 Aes, Esterase/lipase Lipid metabolism 116494325 Common - Phosphoesterase, DHH family protein LSEI_0781 81 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 116495578 Common - Transcriptional regulator LSEI_2120 37 COG1846 MarR, Transcriptional regulators Transcription 116494718 Nonpathogen - hypothetical protein LSEI_1224 1 None None None 116495168 Common - NAD metabolism hydrolase of HD superfamily LSEI_1687 40 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 116494734 Common - Transposase LSEI_1241 60 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494270 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_0725 155 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116495105 Common - Serine/threonine protein phosphatase LSEI_1623 141 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 116495824 Nonpathogen - Prebacteriocin LSEI_2374 2 None None None 116494475 Common tpiA triosephosphate isomerase LSEI_0969 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 116494688 Nonpathogen - hypothetical protein LSEI_1193 1 None None None 116495493 Common - Transposase, IS30 family LSEI_2030 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493877 Common - Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component LSEI_0309 166 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 116495302 Nonpathogen - hypothetical protein LSEI_1829 1 None None None 116494611 Common - Predicted membrane protein LSEI_1112 9 COG4129 COG4129, Predicted membrane protein Function unknown 116494240 Nonpathogen - hypothetical protein LSEI_0692 1 None None None 116495533 Common - cellobiose-specific PTS system IIA component LSEI_2073 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 116494919 Common - Histidinol dehydrogenase LSEI_1433 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 116494281 Common - 5-formyltetrahydrofolate cyclo-ligase LSEI_0736 101 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 116495966 Nonpathogen - hypothetical protein LSEI_2535 1 None None None 116494463 Common - excinuclease ABC subunit B LSEI_0956 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 116495791 Common - L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase LSEI_2339 118 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 116496075 Common - HTH containing DNA-binding domain and MocR-like aminotransferase LSEI_2648 228 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 116495370 Common - lactose transport regulator LSEI_1904 114 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 116495038 Common - hypothetical protein LSEI_1556 106 COG2606 EbsC, Uncharacterized conserved protein Function unknown 116495992 Common - Phosphopantetheinyl transferase (holo-ACP synthase) LSEI_2561 114 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 116494244 Nonpathogen - hypothetical protein LSEI_0696 1 None None None 116494344 Common - Predicted phosphoesterase LSEI_0800 41 COG0622 COG0622, Predicted phosphoesterase General function prediction only 116495131 Nonpathogen - hypothetical protein LSEI_1649 1 None None None 116495470 Common - Transposase LSEI_2005 136 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495035 Common - Transcriptional regulator LSEI_1553 42 COG1309 AcrR, Transcriptional regulator Transcription 116496140 Common - hypothetical protein LSEI_2717 11 None None None 116494652 Common - Methylase of polypeptide chain release factor LSEI_1156 224 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 116494853 Common - RNA-binding protein, S1-like domain LSEI_1367 43 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 116495999 Nonpathogen - hypothetical protein LSEI_2568 1 None None None 116495466 Common - Predicted xylanase/chitin deacetylase LSEI_2000 81 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 116495667 Common - 3-methyladenine DNA glycosylase LSEI_2212 133 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 116494843 Nonpathogen - hypothetical protein LSEI_1356 1 None None None 116494627 Common - hypothetical protein LSEI_1128 3 None None None 116494166 Nonpathogen - hypothetical protein LSEI_0616 2 None None None 116495530 Common - Fe-S oxidoreductase LSEI_2070 170 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 116495798 Common - Transposase, IS30 family LSEI_2347 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493725 Common - Lactoylglutathione lyase related lyase LSEI_0153 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 116493901 Common - Transposase, IS30 family LSEI_0333 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494648 Common - Predicted ring-cleavage extradiol dioxygenase LSEI_1151 35 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 116494118 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID LSEI_0562 39 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 116494396 Common - Zn-ribbon nucleic-acid-binding protein LSEI_0887 12 COG3478 COG3478, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 116494704 Common - ABC-type multidrug transport system, ATPase component LSEI_1210 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116496144 Common - sorbitol PTS, EIIA LSEI_2721 20 COG3731 SrlB, Phosphotransferase system sorbitol-specific component IIA Carbohydrate transport and metabolism 116494351 Common - Small molecule binding protein, 3H domain LSEI_0807 15 COG1827 COG1827, Predicted small molecule binding protein (contains 3H domain) General function prediction only 116494335 Common - MutS family ATPase LSEI_0791 200 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 116494932 Common - acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase LSEI_1446 238 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 116493754 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0183 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116495100 Common - Ribosomal protein L28 LSEI_1618 32 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 116493760 Common - Predicted permease LSEI_0189 41 COG0730 COG0730, Predicted permeases General function prediction only 116496300 Common - Esterase/lipase LSEI_2884 120 COG0657 Aes, Esterase/lipase Lipid metabolism 116495409 Nonpathogen - hypothetical protein LSEI_1943 1 None None None 116495582 Common - Alpha/beta superfamily hydrolase LSEI_2124 67 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 116495197 Common - Predicted S-adenosylmethionine-dependent methyltransferase LSEI_1716 177 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 116493684 Nonpathogen - hypothetical protein LSEI_0112 1 None None None 116496135 Common - Selenocysteine synthase (seryl-tRNASer selenium transferase) LSEI_2712 58 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 116495004 Common - Ribosomal protein S21 LSEI_1521 122 None None None 116495937 Common rplN 50S ribosomal protein L14 LSEI_2493 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 116493902 Common - Transposase LSEI_0334 41 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495944 Common rplB 50S ribosomal protein L2 LSEI_2500 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 116494394 Common - Polysaccharide transport membrane protein LSEI_0885 31 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 116495643 Common - permease of the major facilitator superfamily LSEI_2188 206 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494230 Common - Predicted phosphatase LSEI_0682 66 COG0546 Gph, Predicted phosphatases General function prediction only 116494367 Nonpathogen - hypothetical protein LSEI_0823 1 None None None 116494471 Common - hypothetical protein LSEI_0965 11 None None None 116493774 Common - hypothetical protein LSEI_0203 36 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 116493990 Common - Transcriptional regulator, xre family LSEI_0426 3 None None None 116493752 Common - hypothetical protein LSEI_0181 19 None None None 116493779 Common - Predicted glutamine amidotransferase LSEI_0208 60 COG3442 COG3442, Predicted glutamine amidotransferase General function prediction only 116494336 Common - Thiol-disulfide isomerase and thioredoxin LSEI_0792 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 116493822 Common - Glycosyltransferase related enzyme LSEI_0251 209 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116494754 Common - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase related enzyme LSEI_1263 154 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 116493905 Common - Transcriptional regulator LSEI_0337 8 COG1309 AcrR, Transcriptional regulator Transcription 116494620 Nonpathogen - ABC family transporter LSEI_1121 1 None None None 116494656 Common - F0F1-type ATP synthase, subunit a LSEI_1160 168 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 116496134 Common - hypothetical protein LSEI_2711 15 None None None 116493939 Nonpathogen - hypothetical protein LSEI_0372 1 None None None 116494115 Common - Phosphotransferase system, mannose/fructose-specific component IIA LSEI_0559 16 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 116496093 Common - N-acetylgalactosamine PTS, EIIC LSEI_2666 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 116495953 Common - 30S ribosomal protein S7 LSEI_2509 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 116495033 Nonpathogen - hypothetical protein LSEI_1550 1 None None None 116495898 Common - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component LSEI_2454 178 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 116494239 Common - Putative NADPH-quinone reductase (modulator of drug activity B) LSEI_0691 50 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 116495537 Common - cellobiose-specific PTS system IIC component LSEI_2077 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 116495071 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase LSEI_1589 62 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 116495650 Common - Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component LSEI_2195 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 116494716 Common - DNA-binding response regulator, CitB family (Rec-wHTH domains) LSEI_1222 205 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 116493782 Common - Spo0J-like protein, ParB-like nuclease domain LSEI_0211 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 116495518 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase LSEI_2057 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116496070 Common - Predicted membrane protein LSEI_2643 12 COG3619 COG3619, Predicted membrane protein Function unknown 116494138 Common - hypothetical protein LSEI_0585 25 COG3421 COG3421, Uncharacterized protein conserved in bacteria Function unknown 116495930 Common - Ribosomal protein S5 LSEI_2486 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 116494635 Common - Cytosine/adenosine deaminase LSEI_1136 211 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 116494913 Common hisE phosphoribosyl-ATP pyrophosphatase LSEI_1427 182 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 116493766 Nonpathogen - hypothetical protein LSEI_0195 1 None None None 116495476 Common - dTDP-D-glucose 4,6-dehydratase LSEI_2013 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 116495499 Common - Glucan phosphorylase LSEI_2036 125 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 116493592 Common - Transposase, IS30 family LSEI_0018 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495005 Common - hypothetical protein LSEI_1522 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 116496186 Common - ABC-type sugar transport system, permease component LSEI_2764 151 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 116493916 Common - CRISPR-associated helicase LSEI_0349 67 COG1203 COG1203, Predicted helicases General function prediction only 116494921 Common - ATP phosphoribosyltransferase for histidine biosynthesis LSEI_1435 215 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 116493704 Common - Transcriptional regulator, xre family LSEI_0132 17 COG1476 COG1476, Predicted transcriptional regulators Transcription 116494388 Common - Predicted transcriptional regulator LSEI_0879 8 COG0789 SoxR, Predicted transcriptional regulators Transcription 116494176 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0626 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116493890 Common - fumarate reductase flavoprotein subunit LSEI_0322 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 116496162 Common - Phosphotransferase system, fructose-specific IIC component LSEI_2740 67 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 116493661 Nonpathogen - hypothetical protein LSEI_0089 1 None None None 116493652 Common - permease of the major facilitator superfamily LSEI_0080 181 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116493994 Common - Predicted transcriptional regulator LSEI_0430 35 None None None 116494153 Common - ABC-type amino acid transport/signal transduction system, periplasmic component/domain LSEI_0601 151 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 116495392 Common - Transposase LSEI_1926 26 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494460 Common - Lipoprotein release ABC-type transport system, permease component LSEI_0953 12 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 116495976 Common - Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) LSEI_2545 40 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 116494196 Common - ABC-type multidrug transport system, permease component LSEI_0647 10 COG1511 COG1511, Predicted membrane protein Function unknown 116494392 Common leuS leucyl-tRNA synthetase LSEI_0883 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116494236 Nonpathogen - hypothetical protein LSEI_0688 1 None None None 116495835 Common - Transposase, IS30 family LSEI_2387 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494958 Common - neutral endopeptidase LSEI_1472 63 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 116495140 Common - Transcriptional regulator/sugar kinase LSEI_1659 161 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 116494851 Common - Pyruvate kinase LSEI_1365 235 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 116495112 Common - Predicted esterase of the alpha-beta hydrolase superfamily LSEI_1630 70 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 116495467 Common - hypothetical protein LSEI_2001 10 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 116494311 Common - hypothetical protein LSEI_0767 16 COG0398 COG0398, Uncharacterized conserved protein Function unknown 116495842 Nonpathogen - hypothetical protein LSEI_2395 1 None None None 116494595 Nonpathogen - Predicted Zn-dependent protease LSEI_1094 1 None None None 116494381 Common - hypothetical protein LSEI_0866 8 COG4703 COG4703, Uncharacterized protein conserved in bacteria Function unknown 116493949 Common - putative mutase LSEI_0383 74 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 116495191 Common - Integral membrane protein, interacts with FtsH LSEI_1710 96 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 116493800 Common - H+/gluconate symporter related permease LSEI_0229 84 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 116496098 Common - 5-keto-4-deoxyuronate isomerase LSEI_2671 28 COG3717 KduI, 5-keto 4-deoxyuronate isomerase Carbohydrate transport and metabolism 116494096 Common - Cell wall-associated hydrolase LSEI_0539 93 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 116494858 Common - 16S rRNA uridine-516 pseudouridylate synthase related enzyme LSEI_1372 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 116494764 Common - Cell division septal protein LSEI_1273 12 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 116495939 Common - Ribosomal protein L29 LSEI_2495 147 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 116493807 Common - Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LSEI_0236 13 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 116495965 Common - Disulfide bond chaperones of the HSP33 family LSEI_2534 140 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 116494039 Common - Cysteine synthase LSEI_0480 221 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 116495661 Common - Thymidine phosphorylase LSEI_2206 122 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 116494563 Common - tRNA (uracil-5-)-methyltransferase related enzyme LSEI_1061 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 116493891 Nonpathogen - hypothetical protein LSEI_0323 1 None None None 116495816 Common - Predicted outer membrane protein LSEI_2366 8 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116495060 Common - DNA polymerase III, alpha subunit (gram-positive type) LSEI_1578 215 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 116494707 Common - Double-stranded beta-helix related protein LSEI_1213 68 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 116495989 Common - Toxin-antitoxin addiction module toxin component MazF (an endoRNAse) LSEI_2558 55 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 116496026 Common - tagatose 1,6-diphosphate aldolase LSEI_2597 26 COG3684 LacD, Tagatose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 116495469 Nonpathogen - hypothetical protein LSEI_2004 2 None None None 116495451 Common - Superfamily I DNA and RNA helicase LSEI_1985 38 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 116495830 Nonpathogen - hypothetical protein LSEI_2380 1 None None None 116496035 Common - Enzyme with possible activities of L-2-hydroxyisocaproate/malate/lactate dehydrogenase LSEI_2607 145 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 116495400 Common - Phage terminase large subunit LSEI_1934 12 COG1783 XtmB, Phage terminase large subunit General function prediction only 116494758 Common - SAM-dependent methyltransferase for cell envelope biogenesis LSEI_1267 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 116494985 Common - RNA polymerase sigma factor RpoD LSEI_1501 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 116494265 Common - Nitroreductase LSEI_0717 93 COG0778 NfnB, Nitroreductase Energy production and conversion 116496121 Nonpathogen - hypothetical protein LSEI_2695 1 None None None 116495310 Nonpathogen - hypothetical protein LSEI_1843 1 None None None 116493731 Common - cell surface protein LSEI_0159 7 None None None 116494558 Common - hypothetical protein LSEI_1056 9 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 116496308 Nonpathogen - hypothetical protein LSEI_2892 1 None None None 116495407 Nonpathogen - hypothetical protein LSEI_1941 1 None None None 116495424 Common - hypothetical protein LSEI_1958 4 None None None 116495059 Common - hypothetical protein LSEI_1577 155 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 116495522 Common - ABC-type oligopeptide transport system, ATPase component LSEI_2061 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 116496310 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_2894 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116494569 Common - Acetyltransferase LSEI_1067 70 COG0456 RimI, Acetyltransferases General function prediction only 116495599 Common - Conserved membrane protein, GtcA family LSEI_2141 14 COG2246 COG2246, Predicted membrane protein Function unknown 116494815 Common - DNA polymerase III, delta subunit LSEI_1326 47 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 116494976 Common - Mevalonate pyrophosphate decarboxylase LSEI_1492 31 COG3407 MVD1, Mevalonate pyrophosphate decarboxylase Lipid metabolism 116494012 Common - cellobiose-specific PTS system IIA component LSEI_0449 17 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 116493768 Common - Lactate dehydrogenase related enzyme LSEI_0197 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 116495478 Common - dTDP-glucose pyrophosphorylase LSEI_2015 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 116494878 Common - hypothetical protein LSEI_1392 11 COG4698 COG4698, Uncharacterized protein conserved in bacteria Function unknown 116496049 Common - Na+-driven multidrug efflux pump LSEI_2621 193 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 116494368 Common - Uncharacterized membrane-associated protein LSEI_0824 143 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 116495022 Common - Guanosine polyphosphate pyrophosphohydrolase/synthetase LSEI_1539 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 116495184 Common - Threonyl-tRNA synthetase LSEI_1703 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116495318 Nonpathogen - hypothetical protein LSEI_1851 1 None None None 116494492 Common - ABC-type sugar transport system, periplasmic component LSEI_0988 101 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 116495710 Common - hypothetical protein LSEI_2258 20 COG3870 COG3870, Uncharacterized protein conserved in bacteria Function unknown 116495785 Common - K+ transporter LSEI_2333 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 116494805 Common - hypothetical protein LSEI_1316 9 COG4471 COG4471, Uncharacterized protein conserved in bacteria Function unknown 116495575 Common - Dioxygenase LSEI_2117 141 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 116494350 Common - hypothetical protein LSEI_0806 2 None None None 116495881 Common - Possible cell surface protein LSEI_2437 2 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 116494601 Nonpathogen - hypothetical protein LSEI_1102 1 None None None 116494164 Common - hypothetical protein LSEI_0614 6 None None None 116494082 Nonpathogen - hypothetical protein LSEI_0525 1 None None None 116494469 Common - Transcriptional regulator LSEI_0962 100 COG1846 MarR, Transcriptional regulators Transcription 116495286 Common - N-acetylglucosamine-6-phosphate deacetylase LSEI_1808 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 116494357 Common - dipeptidase PepV LSEI_0813 187 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116496290 Nonpathogen - hypothetical protein LSEI_2872 1 None None None 116495652 Nonpathogen - hypothetical protein LSEI_2197 3 None None None 116495340 Common - ABC-type multidrug transport system, ATPase component LSEI_1873 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116493870 Nonpathogen - hypothetical protein LSEI_0302 1 None None None 116496317 Common - hypothetical protein LSEI_2901 49 COG2966 COG2966, Uncharacterized conserved protein Function unknown 116496299 Common - hydrolase of the alpha/beta superfamily LSEI_2883 68 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 116495429 Nonpathogen - hypothetical protein LSEI_1963 1 None None None 116495800 Common - Transposase, IS30 family LSEI_2350 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495648 Common - beta-glucoside operon antiterminator LSEI_2193 29 COG3711 BglG, Transcriptional antiterminator Transcription 116493880 Common - Sugar kinase, ribokinase family LSEI_0312 202 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 116495901 Common - ABC-type oligopeptide transport system, ATPase component LSEI_2457 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 116493932 Common - Transposase, IS30 family LSEI_0365 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494660 Common - F0F1 ATP synthase subunit alpha LSEI_1164 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 116495663 Nonpathogen - hypothetical protein LSEI_2208 2 None None None 116495279 Common - Cation transport ATPase LSEI_1801 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116494183 Common - Amino acid transporter LSEI_0633 178 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116494947 Nonpathogen - hypothetical protein LSEI_1461 1 None None None 116494871 Common - hypothetical protein LSEI_1385 2 None None None 116494190 Common - Aldo/keto reductase family enzyme LSEI_0641 200 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 116493829 Common - Thiol-disulfide isomerase and thioredoxin LSEI_0261 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 116495135 Common - Arginine/lysine/ornithine decarboxylase LSEI_1654 83 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 116494903 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_1417 17 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116495106 Common - tRNA and rRNA cytosine-C5-methylase LSEI_1624 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 116495270 Common - aldose 1-epimerase LSEI_1791 31 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 116495489 Nonpathogen - hypothetical protein LSEI_2026 1 None None None 116495827 Common - hypothetical protein LSEI_2377 13 COG2966 COG2966, Uncharacterized conserved protein Function unknown 116494781 Common - hypothetical protein LSEI_1290 7 None None None 116496000 Common - Ribosomal protein L31 LSEI_2569 162 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 116494640 Common - Dipeptidase LSEI_1142 22 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 116493599 Nonpathogen - hypothetical protein LSEI_0025 1 None None None 116494515 Nonpathogen - hypothetical protein LSEI_1011 1 None None None 116494320 Nonpathogen - hypothetical protein LSEI_0776 1 None None None 116494573 Nonpathogen - hypothetical protein LSEI_1071 1 None None None 116495216 Common - Metal-dependent hydrolase of the beta-lactamase superfamily III LSEI_1736 36 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 116493657 Nonpathogen - hypothetical protein LSEI_0085 1 None None None 116495368 Nonpathogen - Predicted Zn-dependent protease LSEI_1902 3 COG1913 COG1913, Predicted Zn-dependent proteases General function prediction only 116495165 Common - Predicted nucleotidyltransferase LSEI_1684 27 COG1323 COG1323, Predicted nucleotidyltransferase General function prediction only 116495867 Common - ABC-type Mn/Zn transport system, ATPase component LSEI_2423 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 116494838 Common - Predicted acyltransferase LSEI_1351 91 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 116495210 Nonpathogen - hypothetical protein LSEI_1730 1 None None None 116493761 Common - Predicted membrane protein LSEI_0190 6 COG4272 COG4272, Predicted membrane protein Function unknown 116495551 Common - Transposase, IS30 family LSEI_2092 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495048 Common - Molecular chaperone GrpE (heat shock protein) LSEI_1566 225 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 116494108 Nonpathogen - hypothetical protein LSEI_0551 1 None None None 116494533 Nonpathogen - hypothetical protein LSEI_1030 1 None None None 116494213 Common - UDP-glucose 4-epimerase LSEI_0665 233 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 116495029 Common - hypothetical protein LSEI_1546 4 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 116495157 Common - Acylphosphatase LSEI_1676 4 COG1254 AcyP, Acylphosphatases Energy production and conversion 116494329 Nonpathogen - hypothetical protein LSEI_0785 1 None None None 116493953 Common - Transposase, IS30 family LSEI_0388 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495387 Common - hypothetical protein LSEI_1921 5 None None None 116496118 Nonpathogen - hypothetical protein LSEI_2692 1 None None None 116493583 Common - Ribosomal protein S6 LSEI_0009 189 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 116496238 Common - Transcriptional regulator LSEI_2816 92 COG2188 PhnF, Transcriptional regulators Transcription 116493628 Nonpathogen - hypothetical protein LSEI_0055 1 None None None 116495333 Nonpathogen - hypothetical protein LSEI_1866 1 None None None 116496204 Common - Membrane transporter of cations and cationic drugs LSEI_2782 135 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 116493843 Common - alpha/beta hydrolase superfamily protein LSEI_0275 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 116494073 Nonpathogen - hypothetical protein LSEI_0515 1 None None None 116494642 Nonpathogen - hypothetical protein LSEI_1145 2 None None None 116493726 Nonpathogen - hypothetical protein LSEI_0154 1 None None None 116493921 Common - CRISPR-associated protein LSEI_0354 32 None None None 116494774 Common - permease of the major facilitator superfamily LSEI_1283 193 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495354 Common - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component LSEI_1887 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 116495304 Common - hypothetical protein LSEI_1837 4 None None None 116495241 Nonpathogen - hypothetical protein LSEI_1761 2 None None None 116495054 Common - Ribosome-binding factor A LSEI_1572 168 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 116494480 Common secG preprotein translocase subunit SecG LSEI_0974 17 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 116494650 Common - UDP-N-acetylmuramyl tripeptide synthase LSEI_1153 47 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 116496321 Nonpathogen - hypothetical protein LSEI_2905 1 None None None 116494867 Common - nucleoid DNA-binding protein LSEI_1381 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 116496168 Common - Transcriptional regulator LSEI_2746 121 COG2188 PhnF, Transcriptional regulators Transcription 116495715 Common - DNA polymerase III, gamma/tau subunit LSEI_2263 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 116493718 Nonpathogen - hypothetical protein LSEI_0146 1 None None None 116493835 Common - Predicted amino acid ABC-type transport system, permease component LSEI_0267 153 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 116495320 Common - Triphosphoribosyl-dephospho-CoA synthetase LSEI_1853 48 COG1767 CitG, Triphosphoribosyl-dephospho-CoA synthetase Coenzyme metabolism 116495345 Common - Transcriptional regulator, xre family LSEI_1878 17 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 116496125 Nonpathogen - Predicted holin-like toxin LSEI_2701 1 None None None 116495604 Common - Universal stress protein UspA related nucleotide-binding protein LSEI_2147 19 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 116496082 Common - Fructose-1-phosphate kinase related fructose-6-phosphate kinase (PfkB) LSEI_2655 92 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 116494571 Common - hypothetical protein LSEI_1069 50 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 116493812 Nonpathogen - hypothetical protein LSEI_0241 2 None None None 116495635 Common - glucose-1-dehydrogenase LSEI_2180 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116495178 Common rplT 50S ribosomal protein L20 LSEI_1697 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 116495502 Common glgC glucose-1-phosphate adenylyltransferase LSEI_2039 222 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 116494345 Common - Glycerol uptake facilitator related permease (Major Intrinsic Protein Family) LSEI_0801 131 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 116494659 Common - F0F1-type ATP synthase, delta subunit LSEI_1163 134 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 116494299 Common - Transcriptional regulator LSEI_0755 15 COG1846 MarR, Transcriptional regulators Transcription 116494799 Common - Malate/lactate dehydrogenase LSEI_1310 40 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 116494813 Common - Predicted membrane metal-binding protein LSEI_1324 8 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 116495799 Common - hypothetical protein LSEI_2349 4 None None None 116494535 Nonpathogen - 1-acyl-sn-glycerol-3-phosphate acyltransferase LSEI_1032 2 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 116496235 Common - hypothetical protein LSEI_2813 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 116495777 Common - dUTPase LSEI_2325 115 COG0756 Dut, dUTPase Nucleotide transport and metabolism 116493674 Nonpathogen - hypothetical protein LSEI_0102 1 None None None 116494431 Common - Predicted membrane-associated HD superfamily hydrolase LSEI_0924 76 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 116496246 Common - Aryl-alcohol dehydrogenase related enzyme LSEI_2825 205 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 116495860 Common - Cation transport ATPase LSEI_2414 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116494890 Common - ATP-dependent protease peptidase subunit LSEI_1404 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 116495597 Common - Sortase (surface protein transpeptidase) LSEI_2139 18 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 116493851 Nonpathogen - hypothetical protein LSEI_0283 1 None None None 116495171 Common - Predicted GTPase LSEI_1690 48 COG1161 COG1161, Predicted GTPases General function prediction only 116494613 Common - Cold shock protein LSEI_1114 182 COG1278 CspC, Cold shock proteins Transcription 116495554 Common - hypothetical protein LSEI_2096 2 None None None 116494894 Common - DNA topoisomerase IV subunit B LSEI_1408 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 116496008 Common - NUDIX family hydrolase LSEI_2577 5 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495012 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_1529 160 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116496111 Common - mannose-6-phosphate isomerase LSEI_2684 51 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 116495366 Nonpathogen - hypothetical protein LSEI_1900 1 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 116493770 Common - Predicted membrane protein LSEI_0199 33 COG2261 COG2261, Predicted membrane protein Function unknown 116494783 Common - Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, PP-loop ATPase LSEI_1292 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 116496272 Nonpathogen - hypothetical protein LSEI_2854 1 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 116495958 Nonpathogen - hypothetical protein LSEI_2514 1 None None None 116493973 Nonpathogen - Predicted holin-like toxin LSEI_0409 1 None None None 116495849 Common - Acetyltransferase (isoleucine patch superfamily) LSEI_2402 88 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 116495351 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_1884 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116494996 Nonpathogen - hypothetical protein LSEI_1513 1 None None None 116495613 Common - Lactate dehydrogenase related 2-hydroxyacid dehydrogenase LSEI_2156 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 116495776 Common - DNA repair protein RadA LSEI_2324 201 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 116494901 Common xerS site-specific tyrosine recombinase XerS LSEI_1415 188 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 116496227 Common - hypothetical protein LSEI_2805 8 COG4853 COG4853, Uncharacterized protein conserved in bacteria Function unknown 116493875 Common - ABC-type ribose transport system, auxiliary component LSEI_0307 44 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 116494473 Common - Glyceraldehyde-3-phosphate dehydrogenase LSEI_0967 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 116493741 Common - hypothetical protein LSEI_0169 13 COG0011 COG0011, Uncharacterized conserved protein Function unknown 116493985 Common - Dihydroxyacetone kinase LSEI_0421 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 116495063 Common - CDP-diglyceride synthetase LSEI_1581 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 116495736 Common - Cob(I)alamin adenosyltransferase family enzyme LSEI_2284 130 COG2096 COG2096, Uncharacterized conserved protein Function unknown 116494966 Common - Membrane carboxypeptidase (penicillin-binding protein) LSEI_1481 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 116495238 Common - D-xylose proton-symporter LSEI_1758 157 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494672 Common - ABC-type metal ion transport system, periplasmic component/surface antigen LSEI_1177 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 116494379 Nonpathogen - hypothetical protein LSEI_0864 1 None None None 116494541 Nonpathogen - hypothetical protein LSEI_1038 1 None None None 116495446 Common - pantothenate kinase LSEI_1980 76 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 116495878 Nonpathogen - hypothetical protein LSEI_2434 1 None None None 116494126 Nonpathogen - hypothetical protein LSEI_0572 1 None None None 116495127 Common - Predicted ribosomal protein LSEI_1645 14 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 116494941 Common - Aspartate carbamoyltransferase, catalytic chain LSEI_1455 238 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 116494597 Common - 4-diphosphocytidyl-2-methyl-D-erithritol synthase LSEI_1098 191 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 116493992 Common - Predicted transcriptional regulator LSEI_0428 38 COG0640 ArsR, Predicted transcriptional regulators Transcription 116494409 Common - Uncharacterized protein, RelA_SpoT domain LSEI_0901 78 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 116494204 Common - Putative Mg2+ Transporter-C (MgtC) Family LSEI_0655 117 COG1285 SapB, Uncharacterized membrane protein Function unknown 116495411 Nonpathogen - hypothetical protein LSEI_1945 1 None None None 116495328 Nonpathogen - hypothetical protein LSEI_1861 1 None None None 116494496 Common - Acetyltransferase, GNAT family LSEI_0992 18 COG0456 RimI, Acetyltransferases General function prediction only 116495708 Common - Regulator of replication initiation timing LSEI_2256 14 COG4467 COG4467, Uncharacterized protein conserved in bacteria Function unknown 116494517 Common - Transcriptional regulator LSEI_1013 43 COG1309 AcrR, Transcriptional regulator Transcription 116495402 Nonpathogen - hypothetical protein LSEI_1936 1 None None None 116495856 Common fumC fumarate hydratase LSEI_2410 235 COG0114 FumC, Fumarase Energy production and conversion 116494856 Common - hypothetical protein LSEI_1370 147 COG1354 COG1354, Uncharacterized conserved protein Function unknown 116494694 Common - L-serine deaminase LSEI_1200 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 116495549 Common - hypothetical protein LSEI_2089 70 COG1479 COG1479, Uncharacterized conserved protein Function unknown 116495749 Common - NADH dehydrogenase, FAD-containing subunit LSEI_2297 189 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 116494087 Nonpathogen - hypothetical protein LSEI_0530 1 None None None 116495430 Nonpathogen - hypothetical protein LSEI_1964 1 None None None 116496063 Common - Transcriptional regulator LSEI_2636 16 COG1846 MarR, Transcriptional regulators Transcription 116495487 Nonpathogen - hypothetical protein LSEI_2024 3 None None None 116495770 Common - Predicted membrane protein LSEI_2318 7 COG4194 COG4194, Predicted membrane protein General function prediction only 116493729 Nonpathogen - hypothetical protein LSEI_0157 1 None None None 116495390 Common - hypothetical protein LSEI_1924 4 None None None 116493691 Common - sucrose-specific PTS system IIBC component LSEI_0119 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 116494144 Common - Transposase LSEI_0591 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495760 Common - Cysteinyl-tRNA synthetase LSEI_2308 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116495589 Common - Transcriptional regulator LSEI_2131 81 COG1846 MarR, Transcriptional regulators Transcription 116494684 Common - Predicted sugar phosphatase of HAD family LSEI_1189 122 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 116494888 Common - tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme LSEI_1402 193 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 116495691 Common groEL chaperonin GroEL LSEI_2238 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 116495082 Common - RNA-binding protein, KH domain LSEI_1600 53 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 116494797 Common - dihydrolipoamide dehydrogenase LSEI_1308 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 116495563 Nonpathogen - hypothetical protein LSEI_2105 1 None None None 116495585 Common - Transcriptional regulator LSEI_2127 26 COG1846 MarR, Transcriptional regulators Transcription 116495682 Common - Hemolysins related protein with CBS domains LSEI_2229 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 116494578 Common - Superfamily II DNA and RNA helicase LSEI_1076 234 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 116495689 Common - Amino acid transporter LSEI_2236 63 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116495764 Nonpathogen - hypothetical protein LSEI_2312 1 None None None 116494729 Common - hypothetical protein LSEI_1235 24 None None None 116496263 Common - Predicted membrane protein LSEI_2845 16 COG3428 COG3428, Predicted membrane protein Function unknown 116494590 Common - Glycosyltransferase related enzyme LSEI_1089 219 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116493866 Common - Predicted membrane protein LSEI_0298 7 COG4732 COG4732, Predicted membrane protein Function unknown 116494808 Common - Lon-like protease with PDZ domain LSEI_1319 31 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 116495378 Nonpathogen - hypothetical protein LSEI_1912 1 None None None 116495980 Common - L-lactate dehydrogenase LSEI_2549 178 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 116493799 Common - gluconate kinase LSEI_0228 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 116496286 Common - Signal transduction histidine kinase regulating citrate/malate metabolism LSEI_2868 43 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 116495546 Common - Sugar kinase, ribokinase family LSEI_2086 79 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 116496019 Common - Co/Zn/Cd efflux system component LSEI_2590 172 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 116495288 Common - Dipeptidyl aminopeptidase/acylaminoacyl-peptidase LSEI_1810 109 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 116494963 Common - Cell division initiation protein LSEI_1478 17 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 116495671 Common - Uncharacterized Fe-S protein LSEI_2216 142 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 116494510 Common - ABC-type spermidine/putrescine transport system, ATPase component LSEI_1006 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 116494279 Nonpathogen - hypothetical protein LSEI_0734 1 None None None 116496028 Common - Response regulator of the LytR/AlgR family LSEI_2599 93 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 116496191 Common - Alpha-glucosidase, family 31 of glycosyl hydrolase LSEI_2769 81 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 116494524 Common - Predicted integral membrane protein LSEI_1021 3 COG5652 COG5652, Predicted integral membrane protein Function unknown 116495251 Common - hypothetical protein, RecX family LSEI_1771 37 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 116495298 Common - Fe2+ transport system protein B LSEI_1822 162 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 116495701 Common - Acetyltransferase LSEI_2249 173 COG0456 RimI, Acetyltransferases General function prediction only 116495030 Nonpathogen - hypothetical protein LSEI_1547 1 None None None 116495019 Common - N-acetylmuramoyl-L-alanine amidase LSEI_1536 187 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 116493819 Common - Branched-chain amino acid permease LSEI_0248 47 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 116494373 Common - Transposase LSEI_0857 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496210 Common - Protein tyrosine/serine phosphatase LSEI_2788 49 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 116494731 Nonpathogen - hypothetical protein LSEI_1238 1 None None None 116495117 Common - Predicted rRNA methylase LSEI_1635 131 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 116495076 Common - hypothetical protein LSEI_1594 15 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 116496156 Common - lactose transport regulator LSEI_2734 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 116493711 Common - hypothetical protein LSEI_0139 8 COG3877 COG3877, Uncharacterized protein conserved in bacteria Function unknown 116496217 Nonpathogen - hypothetical protein LSEI_2795 1 None None None 116493664 Common - Transposase, IS30 family LSEI_0092 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495809 Nonpathogen - hypothetical protein LSEI_2359 1 None None None 116493928 Common - Transposase LSEI_0361 57 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495099 Common - hypothetical protein LSEI_1617 33 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 116496012 Common - Predicted membrane protein LSEI_2582 7 None None None 116496109 Nonpathogen - Predicted holin-like toxin LSEI_2682 1 None None None 116495576 Common - Acyl carrier protein LSEI_2118 18 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116494937 Common - Dihydroorotate dehydrogenase LSEI_1451 120 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 116493962 Common - Predicted hydrolase of the HAD superfamily LSEI_0398 134 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116494484 Common - hypothetical protein LSEI_0978 24 None None None 116495206 Common - Membrane carboxypeptidase LSEI_1725 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 116494294 Common - prolyl aminopeptidase LSEI_0750 104 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 116494435 Common - Ribosome-associated protein Y (PSrp-1) LSEI_0928 167 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 116495225 Common - Predicted transcriptional regulator LSEI_1745 24 COG3682 COG3682, Predicted transcriptional regulator Transcription 116495833 Common - hypothetical protein LSEI_2385 25 None None None 116493945 Common - hypothetical protein LSEI_0379 11 None None None 116496279 Common - Tetrahydrodipicolinate N-succinyltransferase LSEI_2861 74 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 116494355 Common - Predicted hydrolase (HAD superfamily) LSEI_0811 70 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 116495109 Common - Phosphopantothenoylcysteine synthetase/decarboxylase LSEI_1627 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 116496067 Nonpathogen - hypothetical protein LSEI_2640 1 None None None 116495994 Common - UDP-N-acetylmuramyl pentapeptide synthase LSEI_2563 210 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 116496270 Common - Uncharacterized membrane protein LSEI_2852 7 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 116496174 Common - Predicted transcriptional regulator LSEI_2752 7 COG1695 COG1695, Predicted transcriptional regulators Transcription 116494033 Common - Sugar phosphate isomerase/epimerase LSEI_0474 10 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 116495728 Nonpathogen - hypothetical protein LSEI_2276 1 None None None 116495646 Common - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase LSEI_2191 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 116494009 Common - Transposase LSEI_0446 55 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116493746 Common - ABC-type oligopeptide transport system, periplasmic component LSEI_0175 170 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 116494467 Common - hypothetical protein LSEI_0960 93 COG0391 COG0391, Uncharacterized conserved protein Function unknown 116494091 Common - Type IV secretory pathway, VirD4 component LSEI_0534 75 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 116493706 Common - Transposase, IS30 family LSEI_0134 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494478 Nonpathogen - hypothetical protein LSEI_0972 1 None None None 116493827 Common - ATPase component of ABC transporter with duplicated ATPase domains LSEI_0256 234 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 116495193 Common - DNA segregation ATPase FtsK/SpoIIIE related protein LSEI_1712 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 116493947 Common - Cystathionine beta-lyase family protein LSEI_0381 10 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 116494277 Common - Auxin efflux carrier (AEC) family permease LSEI_0732 119 COG0679 COG0679, Predicted permeases General function prediction only 116495675 Common - Flavodoxin LSEI_2220 14 COG0716 FldA, Flavodoxins Energy production and conversion 116495138 Common - hypothetical protein LSEI_1657 4 None None None 116495628 Common - ABC-type uncharacterized transport system, ATPase component LSEI_2173 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 116495758 Common - rRNA methylase LSEI_2306 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 116493759 Common - Beta-propeller domains of methanol dehydrogenase type LSEI_0188 77 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 116495593 Nonpathogen - hypothetical protein LSEI_2135 1 None None None 116494714 Nonpathogen - hypothetical protein LSEI_1220 1 None None None 116495925 Common - Translation initiation factor 1 (IF-1) LSEI_2481 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 116495832 Common - ABC-type bacteriocin/lantibiotic exporter with double-glycine peptidase domain LSEI_2384 83 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 116496037 Common - NAD-dependent protein deacetylase, SIR2 family LSEI_2609 148 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 116494970 Common - Aspartate/tyrosine/aromatic aminotransferase LSEI_1486 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 116495873 Common - ADP-ribose pyrophosphatase LSEI_2429 26 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116496024 Common - Mg-dependent DNase LSEI_2595 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 116496091 Common - Phosphotransferase system, mannose/fructose-specific component IIA LSEI_2664 9 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 116493893 Common - Phosphotransferase system, galactitol-specific IIB component LSEI_0325 21 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 116496146 Common - sorbitol PTS, EIIC LSEI_2723 22 COG3730 SrlA, Phosphotransferase system sorbitol-specific component IIC Carbohydrate transport and metabolism 116494756 Nonpathogen - hypothetical protein LSEI_1265 1 None None None 116496241 Common - Acetyltransferase, including N-acetylase of ribosomal protein LSEI_2819 12 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 116494383 Common - Phosphoglycerol transferase related protein, alkaline phosphatase superfamily LSEI_0868 50 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 116495814 Common - hypothetical protein LSEI_2364 3 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116494766 Common - Cell division GTPase LSEI_1275 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 116493777 Common - pyrrolidone-carboxylate peptidase LSEI_0206 57 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 116493750 Nonpathogen - hypothetical protein LSEI_0179 1 None None None 116495460 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_1994 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116495255 Nonpathogen - hypothetical protein LSEI_1775 1 None None None 116495198 Common - Choline kinase-like enzyme LSEI_1717 10 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 116494654 Common - Glycine/serine hydroxymethyltransferase LSEI_1158 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 116495265 Common - Hydroxymethylglutaryl-CoA reductase LSEI_1786 36 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 116495505 Nonpathogen - hypothetical protein LSEI_2042 1 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 116495948 Common rpsJ 30S ribosomal protein S10 LSEI_2504 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 116495796 Common - Transposase LSEI_2344 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494139 Common - Adenine specific DNA methylase Mod LSEI_0586 102 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 116494709 Common - Saccharopine dehydrogenase related protein LSEI_1215 15 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 116494178 Common - permease of the major facilitator superfamily LSEI_0628 110 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 116494296 Common - Acetyltransferase, GNAT family LSEI_0752 16 None None None 116496142 Common - Transcriptional antiterminator LSEI_2719 26 COG3711 BglG, Transcriptional antiterminator Transcription 116495007 Common - hypothetical protein LSEI_1524 53 COG1284 COG1284, Uncharacterized conserved protein Function unknown 116495567 Common - Acetyl-CoA carboxylase alpha subunit LSEI_2109 180 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 116494622 Common - Phosphoglycerol transferase related protein, alkaline phosphatase superfamily LSEI_1123 55 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 116495896 Nonpathogen - Predicted acyltransferase LSEI_2452 6 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 116493906 Common - Acetyltransferase, GNAT family LSEI_0338 31 COG0456 RimI, Acetyltransferases General function prediction only 116493688 Common - Ribosomal protein L9 LSEI_0116 203 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 116494537 Common - Lipopolysaccharide biosynthesis glycosyltransferase LSEI_1034 34 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 116494338 Common - D-alanine-activating enzyme LSEI_0794 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 116496136 Common - dihydroorotase LSEI_2713 25 COG3964 COG3964, Predicted amidohydrolase General function prediction only 116494079 Nonpathogen - hypothetical protein LSEI_0521 1 None None None 116495474 Common - Transposase, IS30 family LSEI_2011 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494983 Common - hypothetical protein LSEI_1499 127 COG0327 COG0327, Uncharacterized conserved protein Function unknown 116495462 Common - Amino acid transporter LSEI_1996 46 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 116495110 Common - DNA-directed RNA polymerase, subunit K/omega LSEI_1628 19 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 116493764 Nonpathogen - hypothetical protein LSEI_0193 1 None None None 116495228 Common - Folate-dependent phosphoribosylglycinamide formyltransferase PurN LSEI_1748 222 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 116495089 Common - dsRNA-specific ribonuclease LSEI_1607 216 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 116495820 Common - Transcriptional regulator, xre family LSEI_2370 11 COG1396 HipB, Predicted transcriptional regulators Transcription 116494168 Common - permease of the drug/metabolite transporter (DMT) superfamily LSEI_0618 71 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 116494098 Nonpathogen - Thiol-disulfide isomerase and thioredoxin LSEI_0541 3 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 116495480 Common - Lipopolysaccharide synthesis sugar transferase LSEI_2017 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 116493820 Nonpathogen - Cell wall-associated hydrolase LSEI_0249 1 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 116494923 Common - NUDIX family hydrolase LSEI_1437 163 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 116496188 Common - nicotinate phosphoribosyltransferase LSEI_2766 106 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 116494370 Common - Thioredoxin reductase LSEI_0826 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 116495982 Common - CBS domain containing protein LSEI_2551 9 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 116494482 Common - Exoribonuclease R LSEI_0976 192 COG0557 VacB, Exoribonuclease R Transcription 116494132 Common - Site-specific recombinase, DNA invertase Pin related protein LSEI_0579 125 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 116494829 Common - Predicted pyrophosphatase LSEI_1342 16 COG1694 MazG, Predicted pyrophosphatase General function prediction only 116493668 Common - Metal-dependent amidase/aminoacylase/carboxypeptidase LSEI_0096 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 116495080 Common - tRNA-(guanine-N1)-methyltransferase LSEI_1598 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 116495490 Common - Gmk, Guanylate kinase LSEI_2027 178 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 116494234 Nonpathogen - hypothetical protein LSEI_0686 1 None None None 116493614 Nonpathogen - hypothetical protein LSEI_0040 1 None None None 116494198 Common - alpha/beta hydrolase superfamily protein LSEI_0649 8 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 116494899 Common - Transcriptional regulator LSEI_1413 185 COG0583 LysR, Transcriptional regulator Transcription 116496107 Common - Signal transduction histidine kinase LSEI_2680 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116495039 Common - adenine phosphoribosyltransferase LSEI_1557 181 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 116495394 Nonpathogen - hypothetical protein LSEI_1928 1 None None None 116495516 Common - Predicted acyltransferase LSEI_2055 16 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 116495941 Common - Ribosomal protein S3 LSEI_2497 241 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 116493650 Common - Anthranilate phosphoribosyltransferase LSEI_0078 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 116495618 Common - Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase LSEI_2161 221 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 116494365 Common - Predicted sugar phosphatase of the HAD superfamily LSEI_0821 103 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 116495277 Common - ABC-type uncharacterized transport system, periplasmic component LSEI_1799 56 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 116493656 Nonpathogen - hypothetical protein LSEI_0084 1 None None None 116494875 Common - Predicted membrane protein, hemolysin III related protein LSEI_1389 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 116493934 Common - putative translaldolase LSEI_0367 98 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 116494191 Common - Amino acid transporter LSEI_0642 153 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 116494322 Common - Glucose-6-phosphate 1-dehydrogenase LSEI_0778 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 116495802 Nonpathogen - hypothetical protein LSEI_2352 1 None None None 116496096 Common - hypothetical protein LSEI_2669 4 None None None 116495294 Common - Alpha-L-fucosidase LSEI_1818 28 COG3669 COG3669, Alpha-L-fucosidase Carbohydrate transport and metabolism 116495932 Common rplF 50S ribosomal protein L6 LSEI_2488 245 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 116493594 Common - Surface antigen LSEI_0020 21 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 116494106 Nonpathogen - hypothetical protein LSEI_0549 1 None None None 116494455 Common - Thioredoxin reductase LSEI_0948 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 116494847 Nonpathogen - hypothetical protein LSEI_1361 1 None None None 116494041 Common - Transposase LSEI_0482 26 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494215 Common - transcription regulator of beta-galactosidase gene LSEI_0667 124 COG1609 PurR, Transcriptional regulators Transcription 116494268 Common - Small conserved membrane protein LSEI_0723 10 None None None 116495380 Common - hypothetical protein LSEI_1914 22 None None None 116494968 Common - Putative primosome component related protein LSEI_1484 21 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 116495951 Common - Predicted transcriptional regulator LSEI_2507 4 COG2378 COG2378, Predicted transcriptional regulator Transcription 116495780 Common - Aminopeptidase C LSEI_2328 15 COG3579 PepC, Aminopeptidase C Amino acid transport and metabolism 116496002 Common - CTP synthetase LSEI_2571 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 116495020 Common - P-Ser-HPr phosphatase LSEI_1537 32 COG0546 Gph, Predicted phosphatases General function prediction only 116495013 Nonpathogen - hypothetical protein LSEI_1530 2 None None None 116495847 Nonpathogen - hypothetical protein LSEI_2400 1 None None None 116493738 Common - Acetate kinase LSEI_0166 161 COG0282 ackA, Acetate kinase Energy production and conversion 116494385 Nonpathogen - hypothetical protein LSEI_0876 1 None None None 116494751 Common - ABC-type amino acid transport system, permease component LSEI_1260 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116494930 Common - acetoin dehydrogenase complex, E1 component, beta subunit LSEI_1444 200 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 116495405 Nonpathogen - hypothetical protein LSEI_1939 1 None None None 116494565 Common - Predicted hydrolase of the HAD superfamily LSEI_1063 114 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116495511 Common - ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones LSEI_2048 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 116493816 Common - 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase LSEI_0245 182 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 116495046 Nonpathogen - hypothetical protein LSEI_1564 1 None None None 116495869 Common - Ribosomal protein S14 LSEI_2425 209 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 116495740 Common - Nucleoside 2-deoxyribosyltransferase LSEI_2288 12 COG3613 COG3613, Nucleoside 2-deoxyribosyltransferase Nucleotide transport and metabolism 116495482 Common - ABC-type amino acid transport system, permease component LSEI_2019 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116494056 Nonpathogen - hypothetical protein LSEI_0498 1 None None None 116494607 Common - Predicted membrane protein LSEI_1108 10 COG4485 COG4485, Predicted membrane protein Function unknown 116496211 Common - Acetyltransferase, GNAT family LSEI_2789 8 COG0456 RimI, Acetyltransferases General function prediction only 116494156 Common - Branched-chain amino acid permease LSEI_0604 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 116494318 Common - Transposase LSEI_0774 60 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495115 Common - DNA repair ATPase LSEI_1633 210 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 116493589 Nonpathogen - hypothetical protein LSEI_0015 1 None None None 116495267 Nonpathogen - hypothetical protein LSEI_1788 1 None None None 116494978 Common - tRNA and rRNA cytosine-C5-methylase LSEI_1494 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 116493634 Nonpathogen - hypothetical protein LSEI_0062 1 None None None 116494120 Common - Beta-fructosidase (levanase/invertase) LSEI_0564 54 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 116494402 Common - Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities LSEI_0894 229 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 116496047 Common - SAM-dependent methyltransferase LSEI_2619 7 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 116493887 Common - Transposase, IS30 family LSEI_0319 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116496220 Nonpathogen - hypothetical protein LSEI_2798 1 None None None 116495979 Common - peptidyl-tRNA hydrolase LSEI_2548 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 116495149 Common - Transcription elongation factor LSEI_1668 204 COG0782 GreA, Transcription elongation factor Transcription 116495426 Nonpathogen - hypothetical protein LSEI_1960 1 None None None 116495626 Common - Geranylgeranyl pyrophosphate synthase LSEI_2171 234 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 116494637 Nonpathogen - hypothetical protein LSEI_1139 1 None None None 116493925 Nonpathogen - hypothetical protein LSEI_0358 1 None None None 116494055 Common - Phage anti-repressor protein LSEI_0497 11 None None None 116495963 Common - Lysyl-tRNA synthetase (class II) LSEI_2532 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 116496301 Common - mannitol-1-phosphate 5-dehydrogenase LSEI_2885 87 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 116494390 Common - hypothetical protein LSEI_0881 6 None None None 116494603 Common - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase LSEI_1104 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 116495783 Nonpathogen - hypothetical protein LSEI_2331 1 None None None 116496297 Common - Predicted membrane protein LSEI_2880 11 COG2261 COG2261, Predicted membrane protein Function unknown 116494084 Nonpathogen - hypothetical protein LSEI_0527 1 None None None 116495024 Common - hypothetical protein LSEI_1541 192 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 116496295 Nonpathogen - hypothetical protein LSEI_2878 1 None None None 116494494 Common - ABC-type sugar transport system, permease component LSEI_0990 145 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 116494896 Common - Pyruvate-formate lyase LSEI_1410 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 116495234 Common - Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase LSEI_1754 182 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 116495665 Nonpathogen - hypothetical protein LSEI_2210 1 None None None 116495312 Common - cell surface protein LSEI_1845 8 None None None 116494427 Common - Xre-like DNA-binding protein LSEI_0920 75 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 116496084 Common glpK glycerol kinase LSEI_2657 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 116495497 Common - Thiamine biosynthesis membrane-associated lipoprotein LSEI_2034 122 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 116493685 Common - hypothetical protein LSEI_0113 4 None None None 116494429 Common - Predicted nucleotide-utilizing enzyme, CinA LSEI_0922 212 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 116496233 Common - Argininosuccinate synthase LSEI_2811 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 116495673 Common - hypothetical protein LSEI_2218 50 COG1268 BioY, Uncharacterized conserved protein General function prediction only 116493676 Common - ADP-ribose pyrophosphatase LSEI_0104 8 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495774 Common - ABC-type multidrug transport system, ATPase component LSEI_2322 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494785 Nonpathogen - TPR repeats containing protein LSEI_1294 1 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 116496088 Nonpathogen - hypothetical protein LSEI_2661 1 None None None 116495606 Common - Homoserine kinase LSEI_2149 122 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 116495364 Nonpathogen - hypothetical protein LSEI_1898 1 None None None 116494744 Common - Folylpolyglutamate synthase LSEI_1252 217 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 116496315 Common - Metal-dependent amidase/aminoacylase/carboxypeptidase LSEI_2899 166 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 116495253 Nonpathogen - hypothetical protein LSEI_1773 1 None None None 116496117 Common - Transposase, IS30 family LSEI_2691 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493575 Common - DNA replication ATPase initiation LSEI_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 116493801 Common - hypothetical protein LSEI_0230 24 None None None 116494666 Nonpathogen - hypothetical protein LSEI_1170 1 None None None 116496259 Common - Predicted integral membrane protein LSEI_2841 5 COG5523 COG5523, Predicted integral membrane protein Function unknown 116494790 Common - RNA binding protein, RRM domain LSEI_1299 11 COG5503 COG5503, Uncharacterized conserved small protein Function unknown 116496225 Nonpathogen - hypothetical protein LSEI_2803 1 None None None 116496010 Common - Large-conductance mechanosensitive channel LSEI_2579 143 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 116494519 Common - ABC-type multidrug transport system, ATPase component LSEI_1015 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116494420 Common - SAM-dependent methyltransferase LSEI_0913 74 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 116493857 Common - ABC-type sugar transport system, periplasmic component LSEI_0289 107 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 116495611 Nonpathogen - hypothetical protein LSEI_2154 2 None None None 116493641 Nonpathogen - hypothetical protein LSEI_0069 1 None None None 116494377 Common - Glycosyltransferase LSEI_0862 110 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 116495074 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_1592 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116494288 Common - hypothetical protein LSEI_0743 3 None None None 116493869 Common - Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase LSEI_0301 223 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 116493717 Common - Lactate dehydrogenase LSEI_0145 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 116494801 Common - Archaeal fructose-1,6-bisphosphatase related enzyme of inositol monophosphatase family LSEI_1312 122 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 116494892 Common - Galactose mutarotase related enzyme LSEI_1406 42 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 116493695 Common - Cation transport ATPase LSEI_0123 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 116495912 Common - Predicted transcriptional regulator LSEI_2468 62 COG0789 SoxR, Predicted transcriptional regulators Transcription 116494865 Common rpsA 30S ribosomal protein S1 LSEI_1379 225 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 116495061 Common - prolyl-tRNA synthetase LSEI_1579 246 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116494000 Common - SAM-dependent methyltransferase LSEI_0437 115 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 116496209 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_2787 196 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116494256 Common - Glycosyltransferase related enzyme LSEI_0708 203 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116494556 Common - Superfamily I DNA and RNA helicase LSEI_1054 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 116496202 Common - Exopolyphosphatase-related protein LSEI_2780 77 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 116494747 Common - Actin-like ATPase for cell morphogenesis LSEI_1255 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 116494453 Common - prolipoprotein diacylglyceryl transferase LSEI_0946 209 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 116495804 Nonpathogen - hypothetical protein LSEI_2354 2 None None None 116494459 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_0952 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116495129 Nonpathogen - hypothetical protein LSEI_1647 1 None None None 116495330 Common - Pyruvate carboxylase LSEI_1863 185 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 116495766 Common - Predicted dehydrogenase related protein LSEI_2314 166 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 116495508 Common - fructose-1,6-bisphosphatase LSEI_2045 18 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 116493642 Common - Cation transport ATPase LSEI_0070 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 116496131 Common - Phosphotransferase system galacitol-specific IIA domain (Ntr-type) LSEI_2707 25 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 116494679 Common - Fe-S cluster assembly ABC-type transport system, permease component LSEI_1184 187 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 116493923 Common - 3'-5' exonuclease and CRISPR-associated protein cas2 LSEI_0356 165 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 116495696 Common - Predicted transcriptional regulator LSEI_2244 126 COG1725 COG1725, Predicted transcriptional regulators Transcription 116494670 Common - Glycine cleavage system H protein (lipoate-binding) LSEI_1174 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 116494489 Nonpathogen - hypothetical protein LSEI_0985 1 None None None 116495204 Common - Predicted HD-superfamily hydrolase LSEI_1723 48 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 116494943 Common - pyrimidine regulatory protein PyrR LSEI_1457 112 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 116493720 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_0148 57 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116494836 Common - lactose transport regulator LSEI_1349 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 116496166 Common - Asparaginase LSEI_2744 84 COG1446 COG1446, Asparaginase Amino acid transport and metabolism 116496052 Common - tryptophanyl-tRNA synthetase II LSEI_2624 248 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116493632 Common - Predicted membrane protein LSEI_0060 153 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 116494683 Common - hypothetical protein LSEI_1188 10 None None None 116494114 Common - Transcriptional regulator containing an AAA-type ATPase domain and a DNA-binding domain LSEI_0558 14 COG3933 COG3933, Transcriptional antiterminator Transcription 116495343 Common - permease of the major facilitator superfamily LSEI_1876 194 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116495762 Nonpathogen - hypothetical protein LSEI_2310 1 None None None 116495713 Common - Recombinational DNA repair protein (RecF pathway) LSEI_2261 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 116495352 Common - Acetyltransferase, including N-acetylase of ribosomal protein LSEI_1885 69 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 116493626 Nonpathogen - hypothetical protein LSEI_0053 1 None None None 116494546 Common - Predicted acetyltransferase LSEI_1044 44 COG3153 COG3153, Predicted acetyltransferase General function prediction only 116495587 Common - Predicted esterase LSEI_2129 45 COG0627 COG0627, Predicted esterase General function prediction only 116493837 Common - ABC-type branched-chain amino acid transport system, ATPase component LSEI_0269 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 116495840 Nonpathogen - hypothetical protein LSEI_2393 1 None None None 116493965 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB LSEI_0401 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 116494926 Nonpathogen - Predicted pyrophosphatase LSEI_1440 3 COG1694 MazG, Predicted pyrophosphatase General function prediction only 116496153 Common araD L-ribulose-5-phosphate 4-epimerase LSEI_2731 122 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 116494548 Common - hypothetical protein LSEI_1046 14 COG4492 PheB, ACT domain-containing protein General function prediction only 116494727 Nonpathogen - hypothetical protein LSEI_1233 1 None None None 116494018 Common - Sortase (surface protein transpeptidase) LSEI_0457 15 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 116496194 Common - L-alanine-DL-glutamate epimerase related enzyme of enolase superfamily LSEI_2772 148 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 116495091 Common - ABC-type dipeptide/oligopeptide/nickel transport system, permease component LSEI_1609 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 116493839 Common - NUDIX family hydrolase LSEI_0271 11 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 116495693 Common - Predicted metal-dependent membrane protease LSEI_2240 11 None None None 116494061 Nonpathogen - hypothetical protein LSEI_0503 1 None None None 116493797 Common - Transcriptional regulator LSEI_0226 86 COG1737 RpiR, Transcriptional regulators Transcription 116493698 Common - fhu operon transcription regulator LSEI_0126 191 COG0583 LysR, Transcriptional regulator Transcription 116496288 Common - 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid dehydrogenase LSEI_2870 164 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 116495389 Common - hypothetical protein LSEI_1923 4 None None None 116493987 Common - Predicted redox protein, regulator of disulfide bond formation LSEI_0423 16 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 116495159 Common - Signal transduction histidine kinase LSEI_1678 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116496017 Common - ABC-type uncharacterized transport system, ATPase component LSEI_2588 249 COG4619 COG4619, ABC-type uncharacterized transport system, ATPase component General function prediction only 116495552 Common - Type I restriction-modification system methyltransferase subunit LSEI_2094 159 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 116494693 Common - L-serine deaminase LSEI_1199 139 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 116494820 Common - BS_ysoA related protein with TPR repeats LSEI_1331 4 None None None 116495335 Common - Acetyltransferase, GNAT family LSEI_1868 13 COG0456 RimI, Acetyltransferases General function prediction only 116495659 Common - Cytochrome bd-type quinol oxidase, subunit 2 LSEI_2204 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 116495307 Common - Alpha-acetolactate decarboxylase LSEI_1840 40 COG3527 AlsD, Alpha-acetolactate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 116493918 Common - CRISPR-associated protein LSEI_0351 4 None None None 116493980 Common - Predicted oxidoreductase; Myosin-crossreactive antigen ortholog LSEI_0416 25 COG4716 COG4716, Myosin-crossreactive antigen Function unknown 116494631 Nonpathogen - hypothetical protein LSEI_1132 3 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 116495590 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_2132 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116495923 Common rpsM 30S ribosomal protein S13 LSEI_2479 246 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 116494526 Common - Type II secretory pathway/competence component, ATPase LSEI_1023 218 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 116496193 Common - Beta-lactamase class A LSEI_2771 15 COG2367 PenP, Beta-lactamase class A Defense mechanisms 116495854 Common - Short-chain alcohol dehydrogenase of unknown specificity LSEI_2408 236 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 116494142 Common - Di- and tricarboxylate transporter LSEI_0589 32 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 116494835 Common - tagatose-6-phosphate kinase LSEI_1348 96 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 116496154 Common - Predicted hydrolase of the HAD superfamily LSEI_2732 134 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116495887 Nonpathogen - hypothetical protein LSEI_2443 1 None None None 116494733 Common - Transcriptional accessory protein LSEI_1240 195 COG2183 Tex, Transcriptional accessory protein Transcription 116495104 Common - Serine/threonine protein kinase with beta-lactam (PASTA) domains LSEI_1622 159 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 116494437 Common - Protein chain release factor B LSEI_0930 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 116494309 Common - S-ribosylhomocysteinase LSEI_0765 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 116496161 Common - putative L-ascorbate 6-phosphate lactonase LSEI_2739 31 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 116493608 Nonpathogen - Predicted membrane protein LSEI_0034 4 COG2364 COG2364, Predicted membrane protein Function unknown 116494504 Common - ABC-type Na+ efflux pump, permease component LSEI_1000 45 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 116494619 Common - Adenylosuccinate lyase LSEI_1120 236 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 116495435 Nonpathogen - hypothetical protein LSEI_1969 1 None None None 116493625 Common - Transcriptional regulator LSEI_0052 130 COG1802 GntR, Transcriptional regulators Transcription 116495120 Common xseA exodeoxyribonuclease VII large subunit LSEI_1638 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 116494567 Common - neutral endopeptidase LSEI_1065 63 COG3590 PepO, Predicted metalloendopeptidase Posttranslational modification, protein turnover, chaperones 116493940 Common - Phosphotransferase system IIA component LSEI_0374 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 116495812 Common - Sortase (surface protein transpeptidase) LSEI_2362 12 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 116493576 Common - DNA polymerase sliding clamp subunit LSEI_0002 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 116494935 Common - Orotate phosphoribosyltransferase LSEI_1449 109 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 116495223 Common - Cation transport ATPase LSEI_1743 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 116495248 Nonpathogen - hypothetical protein LSEI_1768 1 None None None 116495829 Nonpathogen - hypothetical protein LSEI_2379 1 None None None 116493868 Common - Thiamine monophosphate synthase LSEI_0300 180 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 116493960 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_0396 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116495246 Common - Predicted permease LSEI_1766 209 COG0628 PerM, Predicted permease General function prediction only 116495376 Nonpathogen - hypothetical protein LSEI_1910 1 None None None 116494007 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_0444 170 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116493744 Nonpathogen - hypothetical protein LSEI_0173 1 None None None 116495743 Common secE preprotein translocase subunit SecE LSEI_2291 7 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 116495544 Nonpathogen - hypothetical protein LSEI_2084 1 None None None 116494417 Common - glucitol/sorbitol PTS, EIIA LSEI_0909 8 COG3731 SrlB, Phosphotransferase system sorbitol-specific component IIA Carbohydrate transport and metabolism 116493881 Common - Antitoxin of toxin-antitoxin stability system LSEI_0313 11 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 116494827 Nonpathogen - hypothetical protein LSEI_1340 1 None None None 116494021 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_0460 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495871 Common - ABC-type metal ion transport system, periplasmic component/surface adhesin LSEI_2427 121 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 116494413 Common - Copper resistance protein LSEI_0905 56 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 116495448 Nonpathogen - hypothetical protein LSEI_1982 1 None None None 116495880 Nonpathogen - hypothetical protein LSEI_2436 1 None None None 116494599 Common - Transposase LSEI_1100 61 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116493845 Common - Dihydrodipicolinate synthase/N-acetylneuraminate lyase LSEI_0277 8 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 116494128 Nonpathogen - hypothetical protein LSEI_0574 3 None None None 116495084 Common - Signal recognition particle GTPase LSEI_1602 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 116495657 Common - Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component LSEI_2202 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 116495974 Common - RNA binding protein (S1 domain) LSEI_2543 162 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 116495094 Common - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component LSEI_1612 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 116493814 Common - ABC-type Mn2+/Zn2+ transport system, permease component LSEI_0243 182 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 116494994 Nonpathogen - hypothetical protein LSEI_1511 1 None None None 116494302 Common - Aldo/keto reductase related enzyme LSEI_0758 168 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 116494498 Common - Predicted hydrolase of the HAD superfamily LSEI_0994 110 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116496065 Common - Aryl-alcohol dehydrogenase related enzyme LSEI_2638 192 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 116494220 Common - Phosphotransferase system, galactitol-specific IIB component LSEI_0672 4 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 116495683 Common - permease of the major facilitator superfamily LSEI_2230 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494886 Nonpathogen - hypothetical protein LSEI_1400 1 None None None 116495561 Common - Transcriptional regulator LSEI_2103 129 COG1609 PurR, Transcriptional regulators Transcription 116495296 Common - Phosphoenolpyruvate carboxykinase (ATP) LSEI_1820 8 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 116495441 Common - Chromosome partitioning ATPase LSEI_1975 196 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 116495919 Nonpathogen - hypothetical protein LSEI_2475 1 None None None 116494449 Common - hypothetical protein LSEI_0942 9 COG3595 COG3595, Uncharacterized conserved protein Function unknown 116495150 Common - Uridine kinase LSEI_1669 84 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 116496250 Common - Phosphotransferase system, mannose/fructose-specific component IIA LSEI_2829 87 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 116496123 Common - Transposase, IS30 family LSEI_2698 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493874 Common - ribose operon repressor LSEI_0306 126 COG1609 PurR, Transcriptional regulators Transcription 116493832 Nonpathogen - hypothetical protein LSEI_0264 1 None None None 116494761 Common - UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase LSEI_1270 228 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 116494123 Nonpathogen - hypothetical protein LSEI_0569 1 None None None 116494207 Common - Mismatch repair ATPase (MutS family) LSEI_0658 197 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 116494592 Nonpathogen - hypothetical protein LSEI_1091 1 None None None 116494159 Nonpathogen - hypothetical protein LSEI_0607 1 None None None 116496031 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_2602 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116494446 Common - ABC-type phosphate transport system, ATPase component LSEI_0939 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 116494979 Common - hypothetical protein LSEI_1495 2 None None None 116493952 Common - Amino acid transporter LSEI_0386 147 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 116494811 Common - Transposase LSEI_1322 60 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494158 Common - cell surface protein LSEI_0606 8 None None None 116494316 Common - Preprotein translocase subunit YajC LSEI_0772 27 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 116496293 Nonpathogen - hypothetical protein LSEI_2876 1 None None None 116495314 Common - Ribosomal protein L33 LSEI_1847 27 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 116495269 Common - Predicted Mrr-like endonuclease LSEI_1790 24 COG1787 COG1787, Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes Defense mechanisms 116495962 Common - Transcriptional repressor of class III stress genes LSEI_2518 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 116494046 Nonpathogen - hypothetical protein LSEI_0488 1 None None None 116493732 Common - cell surface protein LSEI_0160 8 None None None 116494428 Common - Phosphatidylglycerophosphate synthase LSEI_0921 205 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 116494029 Common - aminopeptidase N LSEI_0470 163 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 116493957 Common - Lyzozyme M1 (1,4-beta-N-acetylmuramidase) LSEI_0393 13 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 116493882 Common - Cell division protein FtsI/penicillin-binding protein 2 LSEI_0314 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 116495313 Nonpathogen - hypothetical protein LSEI_1846 1 None None None 116496029 Common - Predicted signal transduction protein with a C-terminal HATPase domain LSEI_2600 14 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 116495152 Common pheT phenylalanyl-tRNA synthetase subunit beta LSEI_1671 245 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 116494915 Common - Imidazoleglycerol-phosphate synthase LSEI_1429 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 116496304 Common - Phosphotransferase system, mannitol-specific IIBC component LSEI_2888 41 COG2213 MtlA, Phosphotransferase system, mannitol-specific IIBC component Carbohydrate transport and metabolism 116495525 Common - ABC-type dipeptide/oligopeptide/nickel transport system, permease component LSEI_2064 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 116494282 Common - hypothetical protein LSEI_0737 76 COG3189 COG3189, Uncharacterized conserved protein Function unknown 116495752 Common - Geranylgeranyl pyrophosphate synthase LSEI_2300 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 116493937 Common - N-acetylglucosamine and glucose PTS, EIICBA LSEI_0370 51 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 116494770 Common - Cell division initiation protein LSEI_1279 52 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 116495309 Common - Transposase LSEI_1842 57 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494819 Common - Predicted hydrolase of the metallo-beta-lactamase superfamily LSEI_1330 160 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 116496089 Common - hypothetical protein LSEI_2662 10 None None None 116493736 Nonpathogen - hypothetical protein LSEI_0164 1 None None None 116494897 Nonpathogen - hypothetical protein LSEI_1411 1 None None None 116495484 Common - ABC-type amino acid transport/signal transduction system, periplasmic component/domain LSEI_2021 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 116495668 Common - Universal stress protein UspA related nucleotide-binding protein LSEI_2213 96 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 116494512 Common - spermidine/putrescine ABC transporter permease protein LSEI_1008 191 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 116495026 Common - hypothetical protein LSEI_1543 4 None None None 116495756 Nonpathogen - hypothetical protein LSEI_2304 1 None None None 116494043 Nonpathogen - hypothetical protein LSEI_0484 3 None None None 116494160 Common - Transposase LSEI_0609 25 None None None 116494605 Common - beta-glucoside operon antiterminator LSEI_1106 29 COG3711 BglG, Transcriptional antiterminator Transcription 116495579 Common - 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase LSEI_2121 184 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 116494161 Nonpathogen - hypothetical protein LSEI_0611 1 None None None 116494959 Common - Lipoate-protein ligase A LSEI_1473 69 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 116494680 Common - hypothetical protein LSEI_1185 25 None None None 116495789 Common - Predicted membrane protein LSEI_2337 19 COG4292 COG4292, Predicted membrane protein Function unknown 116494217 Nonpathogen - hypothetical protein LSEI_0669 1 None None None 116494354 Common - Membrane carboxypeptidase (penicillin-binding protein) LSEI_0810 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 116494952 Nonpathogen - hypothetical protein LSEI_1466 1 None None None 116494070 Nonpathogen - hypothetical protein LSEI_0512 1 None None None 116495615 Nonpathogen - hypothetical protein LSEI_2158 1 None None None 116494275 Common - Transcriptional regulator, xre family LSEI_0730 171 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 116495015 Nonpathogen - Uncharacterized ABC-type transport system, permease component LSEI_1532 2 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 116494262 Common - Regulator of polyketide synthase expression LSEI_0714 38 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 116494644 Common - Transcriptional regulator LSEI_1147 33 COG1309 AcrR, Transcriptional regulator Transcription 116495427 Nonpathogen - hypothetical protein LSEI_1961 1 None None None 116494315 Common - Queuine/archaeosine tRNA-ribosyltransferase LSEI_0771 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 116495532 Nonpathogen - hypothetical protein LSEI_2072 1 None None None 116494011 Common - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase LSEI_0448 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 116495839 Nonpathogen - hypothetical protein LSEI_2392 1 None None None 116495350 Common - hypothetical protein LSEI_1883 2 None None None 116494873 Common thyA thymidylate synthase LSEI_1387 143 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 116495396 Nonpathogen - hypothetical protein LSEI_1930 1 None None None 116493825 Common - Signal peptidase I LSEI_0254 182 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 116495891 Common - ABC-type phosphate/phosphonate transport system, permease component LSEI_2447 154 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 116494457 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_0950 213 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116494689 Common - Transposase, IS30 family LSEI_1195 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494289 Common - Oligoendopeptidase F LSEI_0745 83 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 116494016 Common - Site-specific recombinase, DNA invertase Pin related protein LSEI_0454 128 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 116494202 Common - Ammonia permease LSEI_0653 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 116494387 Common - permease of the major facilitator superfamily LSEI_0878 233 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116493586 Common - Cytochrome bd-type quinol oxidase, fusion of subunit 1 and subunit 2 LSEI_0012 163 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 116495570 Common - 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase LSEI_2112 188 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 116495542 Common - ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member LSEI_2082 132 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 116493653 Common - Transcriptional regulator LSEI_0081 14 COG1309 AcrR, Transcriptional regulator Transcription 116495383 Common - Minor tail protein gp26-like LSEI_1917 43 COG5412 COG5412, Phage-related protein Function unknown 116496275 Nonpathogen - hypothetical protein LSEI_2857 1 None None None 116496100 Common - 2-keto-3-deoxy-6-phosphogluconate aldolase and 2-dehydro-3-deoxygluconokinase LSEI_2673 142 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 116496148 Common - sorbitol operon transcription regulator LSEI_2725 11 COG3711 BglG, Transcriptional antiterminator Transcription 116495214 Common - adaptor protein LSEI_1734 14 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 116495773 Common - ABC-type transport system for multi-copper enzyme maturation, permease component LSEI_2321 6 None None None 116495862 Common - permease of the major facilitator superfamily LSEI_2416 176 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494058 Nonpathogen - hypothetical protein LSEI_0500 1 None None None 116495180 Common - Translation initiation factor 3 (IF-3) LSEI_1699 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 116496130 Common - galacitol PTS, EIIC LSEI_2706 19 COG3775 GatC, Phosphotransferase system, galactitol-specific IIC component Carbohydrate transport and metabolism 116493602 Common - Mg2+ and Co2+ transporter LSEI_0028 40 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 116495642 Common - Glutathione reductase LSEI_2187 240 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 116494609 Common - Glycosyltransferase related enzyme LSEI_1110 182 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116493950 Common ebgA cryptic beta-D-galactosidase subunit alpha LSEI_0384 74 COG3250 LacZ, Beta-galactosidase/beta-glucuronidase Carbohydrate transport and metabolism 116495275 Common - ABC-type uncharacterized transport system, ATPase component LSEI_1797 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 116494218 Nonpathogen - hypothetical protein LSEI_0670 1 None None None 116494324 Common - Transcriptional regulator with CBS domains LSEI_0780 28 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 116494104 Nonpathogen - hypothetical protein LSEI_0547 1 None None None 116495273 Common - Acetyltransferase, GNAT family LSEI_1795 20 COG0456 RimI, Acetyltransferases General function prediction only 116494944 Common - Pseudouridylate synthase, 23S RNA-specific LSEI_1458 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 116493757 Common - Uncharacterized NAD(FAD)-dependent dehydrogenase LSEI_0186 228 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 116496016 Common - purine operon repressor LSEI_2587 86 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 116495630 Common - Predicted transcriptional regulator LSEI_2175 116 COG1725 COG1725, Predicted transcriptional regulators Transcription 116495838 Nonpathogen - hypothetical protein LSEI_2391 1 None None None 116494927 Common - Predicted membrane protein, putative toxin regulator LSEI_1441 15 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 116494307 Nonpathogen - hypothetical protein LSEI_0763 1 None None None 116495300 Common - Putative NADH-flavin reductase LSEI_1827 55 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 116493775 Common - Predicted membrane protein LSEI_0204 28 COG3819 COG3819, Predicted membrane protein Function unknown 116493788 Common - IMP dehydrogenase/GMP reductase LSEI_0217 237 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 116494703 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_1209 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495258 Common - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase LSEI_1778 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 116496057 Common - ABC-type proline/glycine betaine transport system, permease and substrate binding protein LSEI_2629 157 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 116496160 Common - Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) LSEI_2738 41 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 116495945 Common - Ribosomal protein L23 LSEI_2501 192 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 116495564 Nonpathogen - hypothetical protein LSEI_2106 1 None None None 116495113 Nonpathogen - hypothetical protein LSEI_1631 1 None None None 116495821 Common - Predicted transcriptional regulator LSEI_2371 58 COG1695 COG1695, Predicted transcriptional regulators Transcription 116494172 Common - Pyridoxal/pyridoxine/pyridoxamine kinase LSEI_0622 60 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 116495001 Common - Predicted metal-dependent hydrolase LSEI_1518 206 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 116494712 Common - Transposase, IS30 family LSEI_1218 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493900 Common - ornithine cyclodeaminase LSEI_0332 100 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 116494539 Common - Alpha-galactosidase LSEI_1036 46 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 116493786 Common - translation-associated GTPase LSEI_0215 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 116494399 Common - Glycosyltransferase LSEI_0891 159 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 116494077 Nonpathogen - hypothetical protein LSEI_0519 1 None None None 116495977 Common - Polysaccharide transport membrane protein LSEI_2546 16 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 116494006 Common - Aldo/keto reductase of diketogulonate reductase family LSEI_0443 154 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 116494199 Common - Carbonic anhydrase LSEI_0650 52 COG3338 Cah, Carbonic anhydrase Inorganic ion transport and metabolism 116494726 Common - Chromosome segregation ATPase LSEI_1232 17 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 116495128 Common - Ribosomal protein L21 LSEI_1646 189 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 116494228 Common - galactose-6-phosphate isomerase subunit LacA LSEI_0680 120 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 116494826 Common - FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) LSEI_1338 211 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 116495037 Common - hypothetical protein LSEI_1555 4 None None None 116494331 Common - Holliday junction resolvase-like protein LSEI_0787 184 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 116496003 Common - Predicted integral membrane protein LSEI_2572 5 COG3548 COG3548, Predicted integral membrane protein Function unknown 116493665 Nonpathogen - hypothetical protein LSEI_0093 1 None None None 116494169 Common - hypothetical protein LSEI_0619 3 None None None 116495792 Common - hypothetical protein LSEI_2340 19 None None None 116495996 Nonpathogen - hypothetical protein LSEI_2565 1 None None None 116493907 Common - Transposase LSEI_0339 41 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495496 Common - Predicted transcriptional regulator LSEI_2033 55 COG0640 ArsR, Predicted transcriptional regulators Transcription 116495514 Common - Transposase, IS30 family LSEI_2053 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494854 Common - Integrase LSEI_1368 232 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 116493773 Common - hypothetical protein LSEI_0202 38 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 116494624 Common - Putative glucose uptake permease LSEI_1125 11 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 116493745 Common - putative phosphoketolase LSEI_0174 65 COG3957 COG3957, Phosphoketolase Carbohydrate transport and metabolism 116494254 Common - NADPH:quinone reductase related Zn-dependent oxidoreductase LSEI_0706 107 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 116494530 Nonpathogen - Competence protein ComGC LSEI_1027 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 116494401 Common - Glutathione peroxidase LSEI_0893 115 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 116495934 Common - Ribosomal protein S14 LSEI_2490 195 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 116495556 Common - hypothetical protein LSEI_2098 2 None None None 116495972 Common - Hypoxanthine-guanine phosphoribosyltransferase LSEI_2541 154 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 116495922 Common - 30S ribosomal protein S11 LSEI_2478 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 116495723 Common prsA peptidylprolyl isomerase LSEI_2271 97 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 116494753 Common - ABC-type amino acid transport/signal transduction system, periplasmic component/domain LSEI_1262 178 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 116495361 Common - Predicted transcriptional regulator LSEI_1894 71 COG0640 ArsR, Predicted transcriptional regulators Transcription 116495956 Common - Predicted outer membrane protein LSEI_2512 12 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 116494499 Common - uracil-DNA glycosylase LSEI_0995 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 116493709 Common - hypothetical protein LSEI_0137 25 None None None 116495581 Nonpathogen - hypothetical protein LSEI_2123 1 None None None 116495876 Nonpathogen - hypothetical protein LSEI_2432 1 None None None 116496243 Common - Amidase LSEI_2822 75 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 116494067 Common - DNA polymerase III, epsilon subunit related 3'-5' exonuclease LSEI_0509 4 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 116494769 Common - Cell division protein, S4-like domain LSEI_1278 33 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 116493930 Common - Pyridoxine 5'-phosphate oxidase V related favin-nucleotide-binding protein LSEI_0363 18 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 116494233 Nonpathogen - hypothetical protein LSEI_0685 1 None None None 116496277 Common - Transposase, IS30 family LSEI_2859 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495056 Common - Ribosomal protein HS6-type (S12/L30/L7a) LSEI_1574 23 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 116494092 Common - hypothetical protein LSEI_0535 3 None None None 116496022 Common - Dimethyladenosine transferase (rRNA methylation) LSEI_2593 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 116493855 Common - hypothetical protein LSEI_0287 5 None None None 116495644 Common - Transcriptional regulator LSEI_2189 61 COG1309 AcrR, Transcriptional regulator Transcription 116494653 Common - Putative translation factor (SUA5) LSEI_1157 240 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 116495187 Common - hypothetical protein LSEI_1706 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 116495260 Common - cellobiose-specific PTS system IIA component LSEI_1781 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 116494247 Nonpathogen - hypothetical protein LSEI_0699 1 None None None 116496039 Nonpathogen - hypothetical protein LSEI_2611 3 None None None 116494800 Common - hypothetical protein LSEI_1311 11 COG4476 COG4476, Uncharacterized protein conserved in bacteria Function unknown 116495845 Nonpathogen - hypothetical protein LSEI_2398 1 None None None 116496185 Common - ABC-type sugar transport system, permease component LSEI_2763 142 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 116496179 Common - hypothetical protein LSEI_2757 3 None None None 116493862 Common - ABC-type cobalt transport system, permease component LSEI_0294 24 COG4721 COG4721, Predicted membrane protein Function unknown 116494404 Common - hypothetical protein LSEI_0896 43 COG3830 COG3830, ACT domain-containing protein Signal transduction mechanisms 116495167 Common - Iojap family protein LSEI_1686 200 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 116495457 Common - Protoheme ferro-lyase (ferrochelatase) LSEI_1991 154 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 116494441 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_0934 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495092 Common - ABC-type dipeptide/oligopeptide/nickel transport system, permease component LSEI_1610 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 116494193 Common - NhaP-type Na+/H+ and K+/H+ antiporter LSEI_0644 81 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 116496073 Common - RNase H with double-stranded RNA/RNA-DNA hybrid binding domain LSEI_2646 168 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 116494031 Common - Predicted periplasmic/secreted protein LSEI_0472 14 COG3477 COG3477, Predicted periplasmic/secreted protein Function unknown 116495463 Nonpathogen - hypothetical protein LSEI_1997 1 None None None 116494243 Common - Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase LSEI_0695 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 116494972 Common - Rad3-related DNA helicase LSEI_1488 195 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 116495455 Common - hypothetical protein LSEI_1989 9 None None None 116494529 Nonpathogen - Competence protein ComGC LSEI_1026 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 116496042 Common - Predicted secreted protein LSEI_2614 10 COG4086 COG4086, Predicted secreted protein Function unknown 116493978 Nonpathogen - hypothetical protein LSEI_0414 1 None None None 116495018 Common - Transposase LSEI_1535 41 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 116493895 Nonpathogen - hypothetical protein LSEI_0327 1 None None None 116495874 Nonpathogen - hypothetical protein LSEI_2430 1 None None None 116496151 Common - sorbitol operon transcription regulator LSEI_2728 22 COG3711 BglG, Transcriptional antiterminator Transcription 116495851 Common - Transposase, IS30 family LSEI_2404 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493982 Common - Transcriptional regulator LSEI_0418 11 COG1309 AcrR, Transcriptional regulator Transcription 116494508 Common - NhaP-type Na+/H+ and K+/H+ antiporter LSEI_1004 114 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 116494099 Nonpathogen - hypothetical protein LSEI_0542 1 None None None 116494884 Common - Ribonuclease HII LSEI_1398 215 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 116495086 Common - hypothetical protein LSEI_1604 2 None None None 116495885 Nonpathogen - Integral membrane protein for chromosome condensation LSEI_2441 1 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 116495558 Nonpathogen - hypothetical protein LSEI_2100 1 None None None 116494520 Common - hypothetical protein LSEI_1016 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 116494825 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_1337 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116494945 Common - Lipoprotein signal peptidase LSEI_1459 174 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 116495442 Nonpathogen - hypothetical protein LSEI_1976 1 None None None 116495936 Common - Ribosomal protein L24 LSEI_2492 214 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 116494487 Common - maltosephosphorylase LSEI_0982 50 COG1554 ATH1, Trehalose and maltose hydrolases (possible phosphorylases) Carbohydrate transport and metabolism 116494587 Common - Ribonuclease BN-like family enzyme LSEI_1086 97 COG1295 Rbn, Predicted membrane protein Function unknown 116495698 Common - ATPase component of ABC transporter with duplicated ATPase domains LSEI_2246 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 116494419 Common - guanosine 5'-monophosphate oxidoreductase LSEI_0911 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 116494760 Common - Cell division protein FtsI/penicillin-binding protein 2 LSEI_1269 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 116493618 Nonpathogen - hypothetical protein LSEI_0044 1 None None None 116494451 Common - Predicted membrane protein LSEI_0944 51 COG1950 COG1950, Predicted membrane protein Function unknown 116495202 Nonpathogen - hypothetical protein LSEI_1721 1 COG4980 GvpP, Gas vesicle protein General function prediction only 116496045 Common - Exopolyphosphatase LSEI_2617 71 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 116494034 Common - Short-chain alcohol dehydrogenase LSEI_0475 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116496085 Common - Transposase LSEI_2658 73 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495256 Common - Nucleoside 2-deoxyribosyltransferase LSEI_1776 14 COG3613 COG3613, Nucleoside 2-deoxyribosyltransferase Nucleotide transport and metabolism 116494448 Common - Phosphate uptake regulator LSEI_0941 197 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 116495685 Nonpathogen - hypothetical protein LSEI_2232 1 None None None 116494690 Common - Glutathione biosynthesis bifunctional protein LSEI_1196 61 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 116495704 Common - hypothetical protein LSEI_2252 8 None None None 116495688 Common - Mismatch repair ATPase (MutS family) LSEI_2235 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 116494024 Common - hypothetical protein LSEI_0463 3 None None None 116495130 Nonpathogen - hypothetical protein LSEI_1648 1 None None None 116493648 Common - Phosphoribosylanthranilate isomerase LSEI_0076 195 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 116493963 Common - hypothetical protein LSEI_0399 2 COG3041 COG3041, Uncharacterized protein conserved in bacteria Function unknown 116494544 Common - Signal transduction histidine kinase LSEI_1042 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116494415 Common - Transposase, IS30 family LSEI_0907 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493707 Common - Diadenosine tetraphosphatase related serine/threonine protein phosphatase LSEI_0135 61 COG2129 COG2129, Predicted phosphoesterases, related to the Icc protein General function prediction only 116493834 Common - Branched-chain amino acid ABC-type transport system, permease component LSEI_0266 162 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 116494129 Common - Transposase LSEI_0575 42 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495434 Common - Transcriptional regulator, xre family LSEI_1968 36 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 116495169 Common - Nicotinic acid mononucleotide adenylyltransferase LSEI_1688 190 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 116494735 Common - Transposase LSEI_1242 138 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495415 Nonpathogen - hypothetical protein LSEI_1949 1 None None None 116495902 Nonpathogen - hypothetical protein LSEI_2458 1 None None None 116496132 Common - Transcriptional antiterminator LSEI_2709 28 COG3711 BglG, Transcriptional antiterminator Transcription 116495373 Common - Transposase LSEI_1907 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496260 Nonpathogen - hypothetical protein LSEI_2842 1 None None None 116493912 Common - Transposase LSEI_0345 76 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495538 Nonpathogen - hypothetical protein LSEI_2078 1 None None None 116495573 Common - 3-oxoacyl-acyl carrier protein reductase LSEI_2115 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116496078 Nonpathogen - hypothetical protein LSEI_2651 1 None None None 116495823 Common - hypothetical protein LSEI_2373 4 None None None 116496105 Common - Membrane-associated phospholipid phosphatase LSEI_2678 13 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 116496267 Common - ABC-type amino acid transport/signal transduction system, periplasmic component/domain LSEI_2849 187 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 116494628 Common - hypothetical protein LSEI_1129 36 COG1359 COG1359, Uncharacterized conserved protein Function unknown 116495208 Common - Arginine repressor LSEI_1727 73 COG1438 ArgR, Arginine repressor Transcription 116494710 Common - Acetyltransferase LSEI_1216 29 COG0456 RimI, Acetyltransferases General function prediction only 116496231 Common - Alpha/beta superfamily hydrolase LSEI_2809 130 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 116495125 Common - aminopeptidase P LSEI_1643 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 116494664 Common - Predicted membrane protein LSEI_1168 2 COG4836 COG4836, Predicted membrane protein Function unknown 116494148 Common - Transposase LSEI_0596 26 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495031 Nonpathogen - hypothetical protein LSEI_1548 1 None None None 116494290 Nonpathogen - hypothetical protein LSEI_0746 1 None None None 116495139 Common - Rhodanese-related sulfurtransferase LSEI_1658 111 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 116493682 Common - Transcriptional regulator LSEI_0110 34 COG1309 AcrR, Transcriptional regulator Transcription 116494803 Common - cell division membrane protein LSEI_1314 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 116494466 Common - hypothetical protein LSEI_0959 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 116493793 Common greA transcription elongation factor GreA LSEI_0222 204 COG0782 GreA, Transcription elongation factor Transcription 116494364 Common - hypothetical protein LSEI_0820 11 COG4470 COG4470, Uncharacterized protein conserved in bacteria Function unknown 116494187 Common - Predicted redox protein, regulator of disulfide bond formation LSEI_0638 37 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 116493942 Common - Transcriptional regulator LSEI_0376 12 COG1725 COG1725, Predicted transcriptional regulators Transcription 116493850 Nonpathogen - hypothetical protein LSEI_0282 1 None None None 116496255 Common - Transcriptional regulator, xre family LSEI_2836 5 None None None 116495767 Common - Ribose 5-phosphate isomerase LSEI_2315 133 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 116494933 Common - butyrate kinase LSEI_1447 83 COG3426 COG3426, Butyrate kinase Energy production and conversion 116493795 Common - Aspartate racemase LSEI_0224 61 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 116494724 Nonpathogen - hypothetical protein LSEI_1230 1 None None None 116494439 Common - Cell division protein LSEI_0932 108 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 116494332 Common - hypothetical protein LSEI_0788 15 COG3906 COG3906, Uncharacterized protein conserved in bacteria Function unknown 116494848 Nonpathogen - hypothetical protein LSEI_1362 1 None None None 116495929 Common rpmD 50S ribosomal protein L30 LSEI_2485 64 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 116495221 Common - Signal transduction histidine kinase LSEI_1741 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116494594 Common - UDP-glucose pyrophosphorylase LSEI_1093 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 116494614 Common - Acetyltransferase, GNAT family LSEI_1115 23 COG0456 RimI, Acetyltransferases General function prediction only 116493606 Nonpathogen - hypothetical protein LSEI_0032 1 None None None 116496325 Common rpmH 50S ribosomal protein L34 LSEI_2909 188 None None None 116494960 Nonpathogen - hypothetical protein LSEI_1474 1 None None None 162222713 Common murQ N-acetylmuramic acid-6-phosphate etherase LSEI_2774 85 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 116495051 Common - FAD synthase LSEI_1569 210 COG0196 RibF, FAD synthase Coenzyme metabolism 116494349 Common - Methyl-accepting chemotaxis-like protein LSEI_0805 10 COG4768 COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain General function prediction only 116493991 Nonpathogen - DNA polymerase III, alpha subunit (gram-positive type) LSEI_0427 1 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 116495632 Common - Transposase, IS30 family LSEI_2177 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495341 Common - Putative exporter of polyketide antibiotics LSEI_1874 18 COG3559 TnrB3, Putative exporter of polyketide antibiotics Cell envelope biogenesis, outer membrane 116494287 Common - Peroxiredoxin LSEI_0742 90 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 116495795 Common - Uridine phosphorylase LSEI_2343 89 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 116495358 Common - Transposase LSEI_1891 136 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494739 Common - septation ring formation regulator EzrA LSEI_1246 28 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 116495044 Common - GTP-binding protein LepA LSEI_1562 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 116495940 Common rplP 50S ribosomal protein L16 LSEI_2496 217 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 116495985 Nonpathogen - hypothetical protein LSEI_2554 1 None None None 116496313 Common - Adhesion exoprotein LSEI_2897 19 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 116495617 Common - hypothetical protein LSEI_2160 73 COG2013 COG2013, Uncharacterized conserved protein Function unknown 116495947 Common - Ribosomal protein L3 LSEI_2503 234 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 116496283 Common - hypothetical protein LSEI_2865 3 None None None 116495730 Common - NAD-dependent aldehyde dehydrogenase LSEI_2278 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 116496281 Common aspA aspartate ammonia-lyase LSEI_2863 220 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 116495058 Common nusA transcription elongation factor NusA LSEI_1576 225 COG0195 NusA, Transcription elongation factor Transcription 116493588 Nonpathogen - hypothetical protein LSEI_0014 1 None None None 116496207 Common - Acetyltransferase, GNAT family LSEI_2785 43 COG0456 RimI, Acetyltransferases General function prediction only 116494342 Common - Predicted hydrocarbon binding protein, V4R domain LSEI_0798 7 None None None 116494225 Common - tagatose-6-phosphate kinase LSEI_0677 98 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 116496114 Nonpathogen - hypothetical protein LSEI_2688 1 None None None 116495291 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_1814 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116493639 Common - Predicted metal-dependent membrane protease LSEI_0067 14 None None None 116493687 Common - Signaling protein (consists of PAS, a modified GGDEF and a DHH family phosphatase domains) LSEI_0115 89 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 116494063 Common - Transposase, IS30 family LSEI_0505 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116493872 Nonpathogen - hypothetical protein LSEI_0304 1 None None None 116494749 Common - Cell shape-determining protein LSEI_1257 8 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 116495718 Common - 16S RNA G1207 methylase RsmC LSEI_2266 146 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 116493630 Common - permease of the major facilitator superfamily LSEI_0058 179 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116494721 Nonpathogen - hypothetical protein LSEI_1227 1 None None None 116495096 Common - Fatty acid/phospholipid biosynthesis enzyme LSEI_1614 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 116496129 Common - Phosphotransferase system, galactitol-specific IIB component LSEI_2705 15 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 116493714 Nonpathogen - hypothetical protein LSEI_0142 1 None None None 116495506 Common - hypothetical protein LSEI_2043 43 COG1284 COG1284, Uncharacterized conserved protein Function unknown 116494864 Common - Cytidylate kinase LSEI_1378 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 116495177 Common - Predicted Rossmann fold nucleotide-binding protein LSEI_1696 127 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 116494005 Common - Predicted transcriptional regulator LSEI_0442 84 COG0789 SoxR, Predicted transcriptional regulators Transcription 116494833 Common uvrC excinuclease ABC subunit C LSEI_1346 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 116495737 Common - Predicted membrane protein LSEI_2285 10 None None None 116494423 Common - DNA segregation ATPase FtsK/SpoIIIE related protein LSEI_0916 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 116496176 Common - Acetyltransferase, GNAT family LSEI_2754 8 COG3153 COG3153, Predicted acetyltransferase General function prediction only 116495608 Common - Homoserine dehydrogenase LSEI_2151 216 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 116496164 Common - sorbitol operon transcription regulator LSEI_2742 6 COG3711 BglG, Transcriptional antiterminator Transcription 116494787 Common - Acetyltransferase LSEI_1296 29 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 116493693 Common - Transcriptional regulator LSEI_0121 80 COG1737 RpiR, Transcriptional regulators Transcription 116495144 Common - Predicted membrane protein LSEI_1663 13 COG4485 COG4485, Predicted membrane protein Function unknown 116495337 Common - Predicted transcriptional regulator LSEI_1870 57 COG1695 COG1695, Predicted transcriptional regulators Transcription 116496158 Common - Phosphotransferase system, galactitol-specific IIB component LSEI_2736 8 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 116494566 Common - hypothetical protein LSEI_1064 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 116493670 Common - Diaminopimelate decarboxylase LSEI_0098 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 116494584 Nonpathogen - hypothetical protein LSEI_1083 1 None None None 116494506 Common - Exonuclease III LSEI_1002 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 116494981 Common - Predicted metal-sulfur cluster biosynthetic enzyme LSEI_1497 151 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 116496257 Common - ABC-type polar amino acid transport system, ATPase component LSEI_2838 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 116495722 Common - Subtilisin-like serine protease LSEI_2270 103 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 116494905 Common - Signal transduction histidine kinase LSEI_1419 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116494323 Common - Nucleotidyltransferase/DNA polymerase for DNA repair LSEI_0779 184 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 116494777 Common - NUDIX family hydrolase LSEI_1286 142 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 116494551 Common - Nucleotidyltransferase/DNA polymerase for DNA repair LSEI_1049 169 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 116496054 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_2626 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116494676 Common - Fe-S cluster assembly ABC-type transport system, permease component LSEI_1181 167 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 116495332 Common - H+/citrate symporter LSEI_1865 43 COG2851 CitM, H+/citrate symporter Energy production and conversion 116494779 Common - Nucleoside phosphorylase LSEI_1288 98 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 116494444 Common - ABC-type phosphate transport system, permease component LSEI_0937 230 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 116495594 Nonpathogen - Predicted membrane protein LSEI_2136 1 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 116495321 Common - Transcriptional regulator LSEI_1854 114 COG1802 GntR, Transcriptional regulators Transcription 116495910 Common - ABC-type antimicrobial peptide transport system, ATPase component LSEI_2466 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 116496200 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC LSEI_2778 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 116493623 Common - Transposase, IS30 family LSEI_0050 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494051 Common - Transcriptional regulator, xre family LSEI_0493 11 COG1396 HipB, Predicted transcriptional regulators Transcription 116495163 Common - hypothetical protein LSEI_1682 2 None None None 116493771 Nonpathogen - hypothetical protein LSEI_0200 2 None None None 116494102 Nonpathogen - hypothetical protein LSEI_0545 1 None None None 116495866 Common - ABC-type Mn2+/Zn2+ transport system, permease component LSEI_2422 193 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 116495142 Common - Membrane-associated serine protease LSEI_1661 139 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 116494080 Common - Transposase LSEI_0523 26 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494352 Common - proline dipeptidase LSEI_0808 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 116494852 Common - Predicted membrane protein LSEI_1366 28 COG2707 COG2707, Predicted membrane protein Function unknown 116496223 Nonpathogen - hypothetical protein LSEI_2801 2 None None None 116495108 Common - Primosomal protein N' (replication factor Y) - superfamily II helicase LSEI_1626 212 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 116494326 Common - Superfamily II DNA and RNA helicase LSEI_0782 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 116494780 Common - Cysteine sulfinate desulfinase/cysteine desulfurase related enzyme LSEI_1289 238 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 116494514 Nonpathogen - hypothetical protein LSEI_1010 1 None None None 116495967 Nonpathogen - hypothetical protein LSEI_2536 1 None None None 116495189 Common - Formamidopyrimidine-DNA glycosylase LSEI_1708 181 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 116495954 Common rpsL 30S ribosomal protein S12 LSEI_2510 238 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 116494561 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B LSEI_1059 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 116494579 Common - cellobiose-specific PTS system IIA component LSEI_1077 30 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 116494260 Common - Signal transduction histidine kinase LSEI_0712 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116494646 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_1149 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116495577 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III LSEI_2119 202 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 116495237 Common - Predicted membrane protein LSEI_1757 13 COG3859 COG3859, Predicted membrane protein Function unknown 116495137 Common - tRNA delta(2)-isopentenylpyrophosphate transferase LSEI_1656 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 116495398 Common - Phage Mu protein F like protein LSEI_1932 7 None None None 116493597 Common - Transcriptional regulator LSEI_0023 17 COG1309 AcrR, Transcriptional regulator Transcription 116494954 Common - ribonucleotide-diphosphate reductase subunit alpha LSEI_1468 215 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 116495825 Common - Prebacteriocin LSEI_2375 3 None None None 116495420 Common - DNA replication protein LSEI_1954 30 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 116494200 Common - hypothetical protein LSEI_0651 106 COG0393 COG0393, Uncharacterized conserved protein Function unknown 116496071 Common - Phosphoglycerate mutase family protein LSEI_2644 160 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116495987 Common - Glutamate synthase domain 3 LSEI_2556 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 116494121 Nonpathogen - hypothetical protein LSEI_0566 1 None None None 116494974 Common - ATP-dependent nuclease, subunit B LSEI_1490 26 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 116495640 Common - hypothetical protein LSEI_2185 3 None None None 116495672 Nonpathogen - hypothetical protein LSEI_2217 1 None None None 116493600 Common - Predicted permease LSEI_0026 66 COG0730 COG0730, Predicted permeases General function prediction only 116495603 Common - DNA-binding protein, stimulates sugar fermentation LSEI_2146 108 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 116494879 Common - Peptide methionine sulfoxide reductase LSEI_1393 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 116494600 Common - Transposase LSEI_1101 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116496265 Common - Fructosamine-3-kinase LSEI_2847 66 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 116496273 Common - Membrane associated transglutaminase-like enzyme LSEI_2855 74 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 116494052 Nonpathogen - hypothetical protein LSEI_0494 1 None None None 116494663 Common - F0F1-type ATP synthase, epsilon subunit LSEI_1167 145 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 116494532 Common - Adenine-specific DNA methylase LSEI_1029 11 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 116494375 Common - ComX LSEI_0859 6 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 116495042 Common - hypothetical protein LSEI_1560 34 COG4405 COG4405, Uncharacterized protein conserved in bacteria Function unknown 116496014 Common - Phosphoribosylpyrophosphate synthetase LSEI_2584 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 116494206 Common - ATPase component of ABC transporter with duplicated ATPase domains LSEI_0657 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 116496291 Common - Amino acid transporter LSEI_2873 152 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 116494048 Nonpathogen - hypothetical protein LSEI_0490 1 None None None 116495422 Common - hypothetical protein LSEI_1956 2 None None None 116494490 Common - Predicted transcriptional regulator LSEI_0986 58 COG1476 COG1476, Predicted transcriptional regulators Transcription 116494817 Common - Ribosomal protein S15P/S13E LSEI_1328 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 116493590 Nonpathogen - hypothetical protein LSEI_0016 1 None None None 116494633 Common - Glycosyltransferase LSEI_1134 14 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 116494045 Nonpathogen - hypothetical protein LSEI_0487 1 None None None 116493955 Nonpathogen - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like LSEI_0391 1 None None None 116495471 Common - Transposase, IS30 family LSEI_2007 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495568 Common - Acetyl-CoA carboxylase beta subunit LSEI_2110 202 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 116494210 Common - Glycerol-3-phosphate dehydrogenase LSEI_0661 141 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 116493884 Common - Transcriptional regulator LSEI_0316 32 COG1846 MarR, Transcriptional regulators Transcription 116493763 Nonpathogen - Membrane protein LSEI_0192 1 None None None 116494772 Common - Cold shock protein LSEI_1281 171 COG1278 CspC, Cold shock proteins Transcription 116493730 Common - cell surface protein LSEI_0158 7 None None None 116495527 Common - Translation elongation factor P LSEI_2067 219 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 116494586 Common - hypothetical protein LSEI_1085 28 COG4320 COG4320, Uncharacterized protein conserved in bacteria Function unknown 116496306 Common - Predicted hydrolase of the HAD superfamily LSEI_2890 97 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 116495747 Common - Thiamine biosynthesis membrane-associated lipoprotein LSEI_2295 131 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 116494639 Common - Predicted integral membrane protein LSEI_1141 24 COG3548 COG3548, Predicted integral membrane protein Function unknown 116494917 Common hisH imidazole glycerol phosphate synthase subunit HisH LSEI_1431 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 116495183 Common - Phosphoglycerate mutase family protein LSEI_1702 14 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 116495401 Common - Phage terminase, small subunit LSEI_1935 19 COG3728 XtmA, Phage terminase, small subunit DNA replication, recombination, and repair 116495750 Common - hypothetical protein LSEI_2298 10 COG5341 COG5341, Uncharacterized protein conserved in bacteria Function unknown 116495754 Common - Predicted dinucleotide-binding enzyme LSEI_2302 40 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 116495028 Nonpathogen - hypothetical protein LSEI_1545 1 None None None 116495805 Nonpathogen - hypothetical protein LSEI_2355 1 None None None 116495281 Common - Transposase, IS30 family LSEI_1803 63 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494163 Common - Transposase, IS30 family LSEI_0613 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494868 Common - TPR repeats containing protein LSEI_1382 89 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 116495907 Common rplM 50S ribosomal protein L13 LSEI_2463 218 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 116493734 Common - hypothetical protein LSEI_0162 3 None None None 116495621 Nonpathogen - hypothetical protein LSEI_2165 1 None None None 116493659 Nonpathogen - hypothetical protein LSEI_0087 1 None None None 116496005 Common - hypothetical protein LSEI_2574 9 COG4506 COG4506, Uncharacterized protein conserved in bacteria Function unknown 116495316 Common - Pseudouridylate synthase, 23S RNA-specific LSEI_1849 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 116495623 Common - Transposase LSEI_2167 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495725 Common - Ribosomal protein L10 LSEI_2273 212 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 116495654 Nonpathogen - hypothetical protein LSEI_2199 1 None None None 116494501 Common - Predicted ATPase or kinase LSEI_0997 120 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 116496076 Common - RecA/RadA recombinase LSEI_2649 231 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 116493702 Common - ABC-type transport system, permease component LSEI_0130 7 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 116494474 Common pgk phosphoglycerate kinase LSEI_0968 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 116493927 Nonpathogen - hypothetical protein LSEI_0360 6 None None None 116495465 Common - GTPase LSEI_1999 210 COG2262 HflX, GTPases General function prediction only 116495262 Nonpathogen - hypothetical protein LSEI_1783 1 None None None 116495494 Common - Tyrosyl-tRNA synthetase LSEI_2031 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116493878 Common - ABC-type sugar transport system, periplasmic component LSEI_0310 114 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 116494245 Nonpathogen - hypothetical protein LSEI_0697 2 None None None 116494110 Common - hypothetical protein LSEI_0553 4 None None None 116493996 Common - Fructose/tagatose bisphosphate aldolase LSEI_0432 177 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 116494273 Common - Predicted permease LSEI_0728 205 COG0628 PerM, Predicted permease General function prediction only 116494094 Common - hypothetical protein LSEI_0537 2 None None None 116494280 Nonpathogen - hypothetical protein LSEI_0735 1 None None None 116495970 Common - hypothetical protein LSEI_2539 3 None None None 116495916 Common - ABC-type cobalt transport system, permease component CbiQ related transporter LSEI_2472 90 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 116494133 Common - hypothetical protein LSEI_0580 25 None None None 116495160 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_1679 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116495733 Common - Cation transport ATPase LSEI_2281 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116496170 Nonpathogen - hypothetical protein LSEI_2748 1 None None None 116494027 Common - Membrane associated subtilisin-like serine protease LSEI_0468 54 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 116495818 Common - hypothetical protein LSEI_2368 17 COG3410 COG3410, Uncharacterized conserved protein Function unknown 116493805 Common - Glycosyltransferase related enzyme LSEI_0234 201 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 116494241 Common - hypothetical protein LSEI_0693 2 COG1269 NtpI, Archaeal/vacuolar-type H+-ATPase subunit I Energy production and conversion 116495649 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_2194 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116493699 Common - Transcriptional regulator, xre family LSEI_0127 12 COG1396 HipB, Predicted transcriptional regulators Transcription 116495172 Common - Predicted hydrolase of the HAD superfamily LSEI_1691 44 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 116494755 Nonpathogen - hypothetical protein LSEI_1264 1 None None None 116494762 Common - UDP-N-acetylmuramoylalanine-D-glutamate ligase LSEI_1271 209 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 116496040 Common - Phospholipid-binding protein LSEI_2612 92 COG1881 COG1881, Phospholipid-binding protein General function prediction only 116496141 Common - hypothetical protein LSEI_2718 11 None None None 116495555 Common - Transposase, IS30 family LSEI_2097 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495212 Common - dihydroorotate dehydrogenase 1A LSEI_1732 191 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 116494998 Common - GTPase LSEI_1515 231 COG1159 Era, GTPase General function prediction only 116495960 Common rpoB DNA-directed RNA polymerase subunit beta LSEI_2516 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 116495218 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_1738 7 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 116495453 Common - Kef-type K+ transport system, membrane component LSEI_1987 166 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 116495679 Nonpathogen - Cell wall-associated hydrolase LSEI_2226 1 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 116493897 Nonpathogen - Predicted kinase LSEI_0329 1 COG0645 COG0645, Predicted kinase General function prediction only 116494910 Nonpathogen - hypothetical protein LSEI_1424 1 None None None 116494117 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC LSEI_0561 7 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 116494334 Common - Predicted membrane ancor connecting MutS2 with cell-division Z-ring LSEI_0790 6 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 116494522 Common - Phosphomannomutase LSEI_1018 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 116494705 Nonpathogen - hypothetical protein LSEI_1211 1 None None None 116494267 Common - Predicted transcriptional regulator LSEI_0722 50 COG1695 COG1695, Predicted transcriptional regulators Transcription 116494397 Common - Predicted sugar kinase LSEI_0888 201 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 116495864 Nonpathogen - hypothetical protein LSEI_2418 2 None None None 116493909 Nonpathogen - Transposase LSEI_0342 1 None None None 116493755 Common - Transcriptional regulator, xre family LSEI_0184 6 None None None 116493724 Common - hypothetical protein LSEI_0152 9 COG1416 COG1416, Uncharacterized conserved protein Function unknown 116494719 Common - ABC-type multidrug transport system, permease component LSEI_1225 17 None None None 116494920 Common - ATP phosphoribosyltransferase LSEI_1434 213 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 116493611 Common - Transposase, IS30 family LSEI_0037 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116494722 Common - Predicted transcriptional regulator LSEI_1228 112 COG0789 SoxR, Predicted transcriptional regulators Transcription 116493993 Common - permease of the major facilitator superfamily LSEI_0429 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116493663 Common - ABC-type multidrug transport system, ATPase component LSEI_0091 4 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116493683 Common - hypothetical protein LSEI_0111 4 None None None 116495566 Common - Cyclopropane fatty acid synthase related methyltransferase LSEI_2108 132 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 116495003 Common - GatB/YqeY domain protein LSEI_1520 150 COG1610 COG1610, Uncharacterized conserved protein Function unknown 116495943 Common - Ribosomal protein S19 LSEI_2499 240 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 116496055 Common - Glutathione reductase LSEI_2627 240 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 116494395 Common - 16S rRNA uridine-516 pseudouridylate synthase related pseudouridylate synthase LSEI_0886 184 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 116495763 Nonpathogen - hypothetical protein LSEI_2311 1 None None None 116493753 Nonpathogen - hypothetical protein LSEI_0182 1 None None None 116493903 Nonpathogen - hypothetical protein LSEI_0335 1 None None None 116494470 Common clpP ATP-dependent Clp protease proteolytic subunit LSEI_0963 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 116494462 Common - Predicted hydrolase of HD superfamily LSEI_0955 31 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 116494136 Nonpathogen - hypothetical protein LSEI_0583 1 None None None 116494359 Nonpathogen - hypothetical protein LSEI_0815 4 None None None 116493784 Common - Spo0J-like protein, ParB-like nuclease domain LSEI_0213 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 116495790 Common - hypothetical protein LSEI_2338 2 None None None 116493920 Common - CRISPR-associated protein LSEI_0353 40 None None None 116496099 Common - 2-deoxy-D-gluconate 3-dehydrogenase LSEI_2672 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116495534 Common - hypothetical protein LSEI_2074 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 116494844 Common - Ribosomal protein L32 LSEI_1358 9 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 116494542 Nonpathogen - Predicted integral membrane protein LSEI_1040 1 None None None 116494610 Nonpathogen - hypothetical protein LSEI_1111 1 None None None 116494343 Common - Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1 family LSEI_0799 238 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 116494174 Common - 5,10-methylenetetrahydrofolate reductase LSEI_0624 163 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 116495998 Nonpathogen - hypothetical protein LSEI_2567 1 None None None 116496020 Common - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase LSEI_2591 186 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 116496027 Common - Galactose mutarotase related enzyme LSEI_2598 48 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 116495512 Common - Capsular polysaccharide biosynthesis protein LSEI_2049 40 COG4464 CapC, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 116495991 Common - Alanine racemase LSEI_2560 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 116494626 Common - hypothetical protein LSEI_1127 4 None None None 116494651 Common - Protein chain release factor A LSEI_1155 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 116495500 Common - Glycogen synthase LSEI_2037 138 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 116494717 Common - Signal transduction histidine kinase LSEI_1223 139 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 116493914 Common - Transposase LSEI_0347 43 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 116494649 Common - Beta-lactamase class C related penicillin binding protein LSEI_1152 76 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 116495200 Common - ABC-type multidrug transport system, ATPase component LSEI_1719 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116495437 Common - hypothetical protein LSEI_1971 7 None None None 116495769 Common - Predicted membrane protein LSEI_2317 10 COG4377 COG4377, Predicted membrane protein Function unknown 116495927 Common secY preprotein translocase subunit SecY LSEI_2483 218 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 116494432 Common - hypothetical protein LSEI_0925 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 116495371 Nonpathogen - hypothetical protein LSEI_1905 1 None None None 116494931 Common - acetoin dehydrogenase complex, E1 component, alpha subunit LSEI_1445 157 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 116494576 Common - hypothetical protein LSEI_1074 3 None None None 116494361 Common - Predicted multitransmembrane protein LSEI_0817 9 COG5438 COG5438, Predicted multitransmembrane protein Function unknown 116494806 Common - N6-adenine-specific methylase LSEI_1317 206 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 116494069 Common - hypothetical protein LSEI_0511 5 None None None 116494464 Common - Excinuclease ATPase subunit LSEI_0957 231 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 116494699 Common - Deoxynucleoside kinase LSEI_1205 35 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 116495418 Nonpathogen - hypothetical protein LSEI_1952 1 None None None 116493864 Common - ABC-type cobalt transport system, permease component CbiQ related transporter LSEI_0296 5 None None None 116493944 Common - hypothetical protein LSEI_0378 11 COG4019 COG4019, Uncharacterized protein conserved in archaea Function unknown 116495836 Common - Response regulator of the LytR/AlgR family LSEI_2389 12 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 116493818 Common - Transcriptional regulator LSEI_0247 63 COG1316 LytR, Transcriptional regulator Transcription 116494737 Common - Ribosomal protein S4 LSEI_1244 245 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 116495147 Common - Signal transduction histidine kinase LSEI_1666 150 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 116494181 Common - beta-glucoside-specific PTS system IIABC component LSEI_0631 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 116494292 Common - Nucleoside diphosphate kinase LSEI_0748 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 116495194 Common - EMAP domain LSEI_1713 205 COG0073 ARC1, EMAP domain General function prediction only 116493581 Common - Deoxyribose-phosphate aldolase LSEI_0007 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 116493748 Nonpathogen - hypothetical protein LSEI_0177 1 None None None 116495413 Nonpathogen - hypothetical protein LSEI_1947 1 None None None 116494661 Common - F0F1-type ATP synthase, gamma subunit LSEI_1165 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 116494389 Common - permease of the major facilitator superfamily LSEI_0880 183 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116496253 Common - Transcriptional regulator, xre family LSEI_2834 3 None None None 116495385 Common - hypothetical protein LSEI_1919 7 None None None 116494305 Common - Predicted membrane protein LSEI_0761 37 COG2323 COG2323, Predicted membrane protein Function unknown 116493810 Common - Predicted glycosyltransferase LSEI_0239 67 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 116495531 Nonpathogen - hypothetical protein LSEI_2071 1 None None None 116494842 Nonpathogen - Uncharacterized integral membrane protein LSEI_1355 1 COG5416 COG5416, Uncharacterized integral membrane protein Function unknown 116494616 Common - xanthine phosphoribosyltransferase LSEI_1117 56 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 116493604 Common - Mn2+ and Fe2+ transporter of the NRAMP family LSEI_0030 94 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 116496199 Common - Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID LSEI_2777 40 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 116493585 Common - Ribosomal protein S18 LSEI_0011 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 116493841 Common - Transposase LSEI_0273 138 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 116495444 Common - Integrase LSEI_1978 51 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 116494882 Nonpathogen - hypothetical protein LSEI_1396 1 None None None 116495379 Nonpathogen - hypothetical protein LSEI_1913 1 None None None 116495858 Nonpathogen - hypothetical protein LSEI_2412 1 None None None 116493984 Common - Dihydroxyacetone kinase LSEI_0420 76 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 116495088 Common - Chromosome segregation ATPase LSEI_1606 202 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 116493700 Common - hypothetical protein LSEI_0128 7 None None None 116494089 Nonpathogen - Single-strand binding protein family LSEI_0532 1 None None None 116493968 Common - Alpha-glucosidase, family 31 of glycosyl hydrolase LSEI_0404 82 COG1501 COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases Carbohydrate transport and metabolism 116495432 Nonpathogen - hypothetical protein LSEI_1966 1 None None None 116496061 Common - Predicted metal-dependent membrane protease LSEI_2633 21 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 116494696 Common - Peptide methionine sulfoxide reductase LSEI_1202 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 116495741 Common - alpha/beta hydrolase superfamily protein LSEI_2289 10 COG4814 COG4814, Uncharacterized protein with an alpha/beta hydrolase fold General function prediction only 116493791 Common - Signal transduction histidine kinase LSEI_0220 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 116494022 Common - Signal transduction histidine kinase LSEI_0461 193 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 116494841 Common - Short-chain dehydrogenase of various substrate specificities LSEI_1354 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 116494589 Common - methionine aminopeptidase LSEI_1088 238 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 116495098 Common - Dihydroxyacetone kinase related enzyme LSEI_1616 53 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 116494795 Common - acetoin dehydrogenase complex, E1 component, beta subunit LSEI_1306 193 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 116495329 Common - Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit LSEI_1862 56 COG1883 OadB, Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Energy production and conversion 116495243 Common - hypothetical protein LSEI_1763 3 None None None 116495787 Common - CBS domain containing protein LSEI_2335 54 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 116496080 Nonpathogen - hypothetical protein LSEI_2653 1 None None None 116495772 Common - hypothetical protein LSEI_2320 8 None None None 116495938 Common - Ribosomal protein S17 LSEI_2494 225 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 116493885 Common - hypothetical protein LSEI_0317 2 None None None 116496285 Common - Na+/malate symporter LSEI_2867 30 COG3493 CitS, Na+/citrate symporter Energy production and conversion 116494065 Common - hypothetical protein LSEI_0507 10 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 116493579 Common - DNA gyrase, B subunit LSEI_0005 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 116494674 Common - ABC-type metal ion transport system, permease component LSEI_1179 103 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 116495175 Common - Predicted esterase LSEI_1694 42 COG0400 COG0400, Predicted esterase General function prediction only 116494700 Common - hypothetical protein LSEI_1206 22 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 116495732 Common rplK 50S ribosomal protein L11 LSEI_2280 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 116494907 Common - permease of the major facilitator superfamily LSEI_1421 133 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 116495904 Common - hypothetical protein LSEI_2460 3 None None None 116494442 Common - Signal transduction histidine kinase LSEI_0935 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 116494596 Nonpathogen - hypothetical protein LSEI_1095 1 None None None 116495639 Common - Predicted membrane protein LSEI_2184 34 COG1297 COG1297, Predicted membrane protein Function unknown 116494961 Common - Phosphoglycerate dehydrogenase related enzyme LSEI_1475 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 116493823 Common - Predicted integral membrane protein LSEI_0252 8 COG5523 COG5523, Predicted integral membrane protein Function unknown 116495779 Common - Predicted membrane protein LSEI_2327 60 COG3152 COG3152, Predicted membrane protein Function unknown 116494740 Common - Thiamine biosynthesis ATP pyrophosphatase LSEI_1248 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 116494789 Common - mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme LSEI_1298 154 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 116496113 Common - hypothetical protein LSEI_2687 11 None None None 116494313 Common ruvB Holliday junction DNA helicase B LSEI_0769 223 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 116494862 Common - Superfamily II DNA helicase LSEI_1376 235 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 116494003 Common - Predicted metal-dependent hydrolase of the TIM-barrel fold LSEI_0440 7 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 116496248 Common - mannose-specific PTS system component IID LSEI_2827 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 116495739 Common - Ribonucleotide reductase, alpha subunit LSEI_2287 35 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 116494911 Common - Nitroreductase LSEI_1425 50 COG0778 NfnB, Nitroreductase Energy production and conversion 116493672 Common dapF diaminopimelate epimerase LSEI_0100 199 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 116493971 Common - ABC-type multidrug transport system, ATPase and permease component LSEI_0407 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116494553 Common - Predicted membrane protein LSEI_1051 2 COG4640 COG4640, Predicted membrane protein Function unknown 116493713 Common - Microcin C7 resistance MccF related protein LSEI_0141 52 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 116493879 Common - Transposase, IS30 family LSEI_0311 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 116495078 Nonpathogen - hypothetical protein LSEI_1596 1 None None None 116493645 Common - Crp-like transcriptional regulator LSEI_0073 158 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 116494037 Common aroE shikimate 5-dehydrogenase LSEI_0478 222 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 116495283 Common - Beta-lactamase class C related penicillin binding protein LSEI_1805 123 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 116496033 Common - hypothetical protein LSEI_2605 79 COG1801 COG1801, Uncharacterized conserved protein Function unknown 116494425 Common - Predicted Zn-dependent peptidase LSEI_0918 109 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 116495540 Common - hypothetical protein LSEI_2080 77 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 116493743 Common - permease of the major facilitator superfamily LSEI_0172 224 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 116493595 Common - ABC-type antimicrobial peptide transport system, permease component LSEI_0021 81 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 116495492 Common - Surface antigen LSEI_2029 162 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 116494180 Common - alpha, alpha-phosphotrehalase LSEI_0630 164 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 116495010 Common - Histidyl-tRNA synthetase LSEI_1527 248 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116495807 Common - Gamma-glutamyl phosphate reductase LSEI_2357 193 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 116495528 Common - hypothetical protein LSEI_2068 44 COG1556 COG1556, Uncharacterized conserved protein Function unknown 116496215 Common - hypothetical protein LSEI_2793 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 116495323 Common citX 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase LSEI_1856 22 COG3697 CitX, Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) Coenzyme metabolism / Lipid metabolism 116495356 Common - ABC-type dipeptide/oligopeptide/nickel transport system, permease component LSEI_1889 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 116494259 Common - DNA-binding response regulator, OmpR family (Rec-wHTH domains) LSEI_0711 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 116494823 Nonpathogen - hypothetical protein LSEI_1334 1 None None None 116494955 Common nrdF ribonucleotide-diphosphate reductase subunit beta LSEI_1469 142 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 116495348 Common - Uncharacterized ABC transporter, ATPase component LSEI_1881 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 116495843 Nonpathogen - immunity protein PlnI, membrane-bound protease CAAX family LSEI_2396 1 None None None 116495920 Common rplQ 50S ribosomal protein L17 LSEI_2476 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 116494146 Common - Predicted flavoprotein LSEI_0593 100 COG0431 COG0431, Predicted flavoprotein General function prediction only 116494195 Common - Response regulator of the LytR/AlgR family LSEI_0646 22 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 116494252 Common - ABC-type uncharacterized transport system, permease component LSEI_0704 46 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 116493677 Common - permease of the drug/metabolite transporter (DMT) superfamily LSEI_0105 11 COG2510 COG2510, Predicted membrane protein Function unknown 116495711 Common - Thymidylate kinase LSEI_2259 232 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 116496181 Common - Transcriptional regulator, xre family LSEI_2759 33 COG1476 COG1476, Predicted transcriptional regulators Transcription 116494516 Common - Cation transport ATPase LSEI_1012 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 116494743 Common - Valyl-tRNA synthetase LSEI_1251 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116495677 Nonpathogen - hypothetical protein LSEI_2223 1 None None None 116495706 Common - Acyl-ACP thioesterase LSEI_2254 22 COG3884 FatA, Acyl-ACP thioesterase Lipid metabolism 116494476 Common - Enolase LSEI_0970 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 116494285 Common - Malolactic enzyme LSEI_0740 201 COG0281 SfcA, Malic enzyme Energy production and conversion 116494227 Common - galactose-6-phosphate isomerase subunit LacB LSEI_0679 127 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 116493689 Common - Replicative DNA helicase LSEI_0117 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 116494668 Nonpathogen - hypothetical protein LSEI_1172 1 None None None 116495000 Common - Diacylglycerol kinase LSEI_1517 8 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 116495637 Common - Alanine dehydrogenase LSEI_2182 167 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 116495716 Common - Cytosine/adenosine deaminase LSEI_2264 215 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 116495403 Nonpathogen - hypothetical protein LSEI_1937 3 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 116496205 Nonpathogen - hypothetical protein LSEI_2783 1 None None None 116495068 Common rpsB 30S ribosomal protein S2 LSEI_1586 247 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 116495339 Common - Nitroreductase LSEI_1872 71 COG0778 NfnB, Nitroreductase Energy production and conversion 116493637 Common - glycine betaine/carnitine/choline ABC transporter, permease protein LSEI_0065 191 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 116493646 Common trpA tryptophan synthase subunit alpha LSEI_0074 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 116494686 Common - Universal stress protein UspA related nucleotide-binding protein LSEI_1191 125 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 116495601 Common - Pyruvate oxidase LSEI_2143 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 116496323 Common - Preprotein translocase subunit YidC LSEI_2907 208 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 116495670 Common - Protein tyrosine/serine phosphatase LSEI_2215 51 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 116496103 Common - hypothetical protein LSEI_2676 5 None None None 116494634 Common - Predicted dehydrogenase related protein LSEI_1135 150 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 116495235 Common - Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) LSEI_1755 195 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism