Buchnera aphidicola str. Cc (Cinara cedri), complete genome NC_008513 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 116515109 Nonpathogen yciC YciC BCc_173 1 None None None 116515047 Common nuoK NADH dehydrogenase I chain K BCc_106 40 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 116515029 Common rplY 50S ribosomal protein L25 BCc_088 33 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 116514984 Common lig DNA ligase BCc_039 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 116515113 Common hisS HisS BCc_177 238 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515050 Common nuoN NADH dehydrogenase I chain N BCc_109 88 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 116515040 Common nuoCD bifunctional NADH:ubiquinone oxidoreductase subunit C/D BCc_099 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 116515062 Common rnt ribonuclease T BCc_122 55 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 116515274 Common ssb Ssb BCc_357 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 116515221 Common mdlB ATP-binding component of a transport system, (ABC superfamily, subfamily C) BCc_298 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116515179 Common rimM 16s rRNA processing protein BCc_247 41 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 116515020 Common infC InfC BCc_079 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 116515059 Common ung Ung BCc_118 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 116515184 Common rluD RluD BCc_253 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 116515121 Common sucB 2-oxoglutarate dehydrogenase E2 component BCc_185 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 116514952 Common gyrB DNA gyrase subunit B BCc_002 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 116515038 Common nuoA NADH dehydrogenase I chain A BCc_097 134 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 116514971 Common rplA 50S ribosomal protein L1 BCc_022 247 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 116515125 Common himD HimD BCc_189 198 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 116515003 Common aroC chorismate synthase BCc_061 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 116515194 Common ygfZ YgfZ BCc_268 38 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 116515170 Nonpathogen yrbA YrbA BCc_238 4 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 116515234 Common rpoA DNA-directed RNA polymerase subunit alpha BCc_316 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 116514976 Common argB ArgB BCc_031 80 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 116515011 Common hisF imidazole glycerol phosphate synthase subunit HisF BCc_069 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 116515146 Common flgI FlgI BCc_213 104 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 116515205 Common fba fructose-bisphosphate aldolase BCc_279 87 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 116515162 Common truB TruB BCc_229 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 116515096 Common tadA TadA BCc_160 209 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 116515072 Common aceF AceF BCc_132 186 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 116515256 Common rplB 50S ribosomal protein L2 BCc_338 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 116515200 Common leuS LeuS BCc_274 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515033 Common dapB DapB BCc_092 215 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 116515018 Common aroH phospho-2-dehydro-3-heoxyheptonate aldolase BCc_077 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 116514967 Common rpoC RNA polymerase, b' subunit BCc_018 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 116515116 Common mfd Mfd BCc_180 213 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 116514957 Common yidC YidC BCc_007 177 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 116515088 Common dnaE DNA polymerase III, a subunit BCc_148 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 116515306 Common engA EngA BCc_396 225 COG1160 COG1160, Predicted GTPases General function prediction only 116515103 Common fabI FabI BCc_167 181 COG0623 FabI, Enoyl- acyl-carrier-protein 116515164 Common infB InfB BCc_231 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 116515283 Common rplI 50S ribosomal protein L9 BCc_368 209 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 116515135 Common zwf Zwf BCc_199 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 116515210 Common nusB NusB BCc_285 143 COG0781 NusB, Transcription termination factor Transcription 116515261 Common tuf elongation factor Tu BCc_343 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 116515130 Common trxB TrxB BCc_194 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 116515246 Common rpsN 30S ribosomal protein S14 BCc_328 207 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 116515217 Common clpP ClpP BCc_293 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 116514962 Common dnaC DNA replication protein DnaC BCc_013 74 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 116515094 Common grpE1 GrpE1 BCc_158 35 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 116515257 Common rplW 50S ribosomal protein L23 BCc_339 153 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 116515177 Common ffh Ffh BCc_245 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 116515060 Nonpathogen grpE GrpE BCc_119 1 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 116515045 Common nuoI NADH dehydrogenase I chain I BCc_104 193 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 116515057 Common gyrA DNA gyrase, A subunit BCc_116 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 116515260 Common rpsJ 30S ribosomal protein S10 BCc_342 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 116515192 Common engB EngB BCc_266 175 COG0218 COG0218, Predicted GTPase General function prediction only 116515022 Common rplT 50S ribosomal protein L20 BCc_081 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 116515223 Common ybaB YbaB BCc_301 134 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 116515076 Common ftsA ATP-binding cell division protein BCc_136 173 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 116515105 Common lipB LipB BCc_169 168 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 116515069 Common truA TruA BCc_129 232 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 116515226 Common folD 5,10-methylene-tetrahydrofolate dehydrogenase BCc_305 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 116515005 Common hisG ATP phosphoribosyltransferase BCc_063 204 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 116515203 Common asd aspartate-semialdehyde dehydrogenase BCc_277 193 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 116515175 Common rplM 50S ribosomal protein L13 BCc_243 226 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 116515160 Common pnp polynucleotide phosphorylase/polyadenylase BCc_227 240 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 116514991 Common fliP flagellar biosynthesis protein FliP BCc_048 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 116515144 Common flgF FlgF BCc_211 12 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 116515236 Common rpsK 30S ribosomal protein S11 BCc_318 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 116515169 Common greA GreA BCc_237 204 COG0782 GreA, Transcription elongation factor Transcription 116514960 Common groEL chaperonin GroEL BCc_011 246 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 116515154 Common asnC asparaginyl-tRNA synthetase BCc_221 175 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 116515281 Common sbcB SbcB BCc_364 51 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 116515290 Common hslV ATP-dependent protease peptidase subunit BCc_376 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 116515074 Common yadR YadR BCc_134 153 COG0316 IscA, Uncharacterized conserved protein Function unknown 116515133 Common yebC YebC BCc_197 184 COG0217 COG0217, Uncharacterized conserved protein Function unknown 116515182 Common aroQ 3-dehydroquinate dehydratase BCc_251 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 116515243 Common rplR 50S ribosomal protein L18 BCc_325 212 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 116515297 Common trxA TrxA BCc_386 213 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 116515303 Nonpathogen hscB HscB BCc_393 1 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 116515118 Common fldA FldA BCc_182 64 COG0716 FldA, Flavodoxins Energy production and conversion 116515036 Common dnaJ DnaJ BCc_095 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 116515086 Common yaeT YaeT BCc_146 27 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 116514969 Common rplL 50S ribosomal protein L12 BCc_020 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 116515031 Common carB CarB BCc_090 235 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 116515115 Common pgl 6-phosphogluconolactonase, cycloisomerase 2 family BCc_179 34 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 116515301 Common iscS IscS BCc_391 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 116515153 Common ycfH YcfH BCc_220 236 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 116515122 Common gpmA GpmA BCc_186 133 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 116514993 Nonpathogen fliR FliR BCc_050 1 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 116515188 Common rpiA RpiA BCc_259 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 116515168 Common ftsJ FtsJ BCc_236 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 116514980 Common danG DNA primase BCc_035 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 116515238 Nonpathogen rpmJ 50S ribosomal protein L36 BCc_320 1 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 116514975 Common metF 5,10-methylenetetrahydrofolate reductase BCc_030 140 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 116515263 Common rpsG 30S ribosomal protein S7 BCc_345 236 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 116515067 Common thrA ThrA BCc_127 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 116515199 Common ybeY YbeY BCc_273 99 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 116515241 Common rpmD 50S ribosomal subunit protein L30 BCc_323 104 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 116515128 Common serC phosphoserine aminotransferase BCc_192 96 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 116515149 Common fabD FabD BCc_216 176 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 116515015 Common mesJ MesJ BCc_073 133 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 116515025 Common himA HimA BCc_084 201 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 116515250 Common rpsQ 30S ribosomal protein S17 BCc_332 233 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 116515043 Common nuoG NADH dehydrogenase I chain G BCc_102 179 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 116515107 Common sppA SppA BCc_171 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 116515289 Common rpmE 50S ribosomal protein L31 BCc_375 153 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 116515084 Common pyrH PyrH BCc_144 225 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 116514987 Nonpathogen fliG FliG BCc_044 1 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 116515288 Common orn oligoribonuclease BCc_373 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 116515132 Common aspS AspS BCc_196 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515091 Common flhA FlhA BCc_151 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 116515142 Common rsmC 16S RNA m2G1207 methylase BCc_206 69 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 116515266 Common yheM YheM BCc_348 35 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 116515230 Common aroE AroE BCc_312 181 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 116515056 Common pta Pta BCc_115 166 COG0280 Pta, Phosphotransacetylase Energy production and conversion 116514965 Common rpoH RNA polymerase sigma-32 factor BCc_016 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 116515158 Common yhaR YhaR BCc_225 57 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 116515279 Common mutY A/G-specific adenine glycosylase BCc_362 229 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 116515204 Common pgk Pgk BCc_278 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 116515089 Common proS prolyl-tRNA synthetase BCc_149 195 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515296 Common rho transcription termination factor Rho BCc_385 201 COG1158 Rho, Transcription termination factor Transcription 116515216 Nonpathogen bolA BolA BCc_292 1 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 116515270 Common aroB 3-dehydroquinate synthase BCc_352 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 116515209 Common recD RecD BCc_283 66 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 116515197 Common lysA diaminopimelate decarboxylase BCc_271 210 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 116515052 Common prfA PrfA BCc_111 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 116515126 Common rpsA 30S ribosomal protein S1 BCc_190 214 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 116515227 Common cysS CysS BCc_306 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515007 Common hisC HisC BCc_065 222 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 116515140 Common minD MinD BCc_204 134 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 116515065 Common thrC threonine synthase BCc_125 163 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 116515211 Common cyoE CyoE BCc_287 46 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 116514958 Common thdF GTP-binding protein BCc_008 213 COG0486 ThdF, Predicted GTPase General function prediction only 116515220 Common mdlA ATP-binding component of a transport system, (ABC superfamily, subfamily B) BCc_297 246 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 116515151 Nonpathogen acpP AcpP BCc_218 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116515000 Common tktB TktB BCc_058 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 116514982 Common gcp Gcp BCc_037 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 116515291 Common hslU ATP-dependent protease ATP-binding subunit BCc_377 212 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 116514973 Common nusG NusG BCc_024 214 COG0250 NusG, Transcription antiterminator Transcription 116515071 Common aceE pyruvate dehydrogenase subunit E1 BCc_131 135 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 116515048 Common nuoL NADH dehydrogenase I chain L BCc_107 206 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 116515098 Common era Era BCc_162 113 COG1159 Era, GTPase General function prediction only 116515137 Common yoaE YoaE BCc_201 122 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 116515254 Common rplV 50S ribosomal protein L22 BCc_336 204 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 116514989 Common fliI FliI BCc_046 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 116515173 Common yhbZ GTP-binding protein, Obg family BCc_241 238 COG0536 Obg, Predicted GTPase General function prediction only 116515041 Common nuoE NADH dehydrogenase I chain E BCc_100 156 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 116514978 Common argH ArgH BCc_033 219 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 116515027 Common glyQ glycyl-tRNA synthetase subunit alpha BCc_086 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 116515240 Common rplO 50S ribosomal protein L15 BCc_322 58 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 116514997 Common yraL YraL BCc_055 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 116515277 Nonpathogen yqgF YggF BCc_360 1 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 116515166 Nonpathogen secG SecG BCc_234 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 116515078 Common ilvH IlvH BCc_138 190 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 116515082 Common rpsB 30S ribosomal protein S2 BCc_142 220 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 116515111 Common suhB SuhB BCc_175 173 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 116515035 Common rpsT 30S ribosomal protein S20 BCc_094 37 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 116515013 Common gnsD 6-phosphogluconate dehydrogenase, decarboxylating BCc_071 167 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 116515304 Common hscA HscA BCc_394 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 116515186 Common csrA CsrA BCc_255 79 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 116515139 Common minE MinE BCc_203 19 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 116514955 Common rpmH 50S ribosomal protein L34 BCc_005 186 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 116515286 Common miaA MiaA BCc_371 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 116515002 Common dapA DapA BCc_060 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 116515214 Common cyoB CyoB BCc_290 167 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 116515156 Common valS ValS BCc_223 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515294 Common dapF DapF BCc_380 199 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 116515207 Common recC RecC BCc_281 29 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 116515202 Common yhhP YhhP BCc_276 28 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 116515276 Common dnaB DnaB BCc_359 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 116515268 Common trpS TrpS BCc_350 219 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515171 Common rplU 50S ribosomal protein L21 BCc_239 83 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 116514995 Common rpmB 50S ribosomal protein L28 BCc_052 50 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 116515232 Common fmt Fmt BCc_314 222 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 116515054 Common ychA YchA BCc_113 35 COG2912 COG2912, Uncharacterized conserved protein Function unknown 116515147 Common rluC RluC BCc_214 214 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 116514961 Common efp Efp BCc_012 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 116514977 Common argG ArgG BCc_032 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 116515012 Common hisI HisI BCc_070 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 116515090 Common flhB FlhB BCc_150 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 116515097 Common acpS AcpS BCc_161 7 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 116515247 Common rplE 50S ribosomal protein L5 BCc_329 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 116515285 Common rpsF 30S ribosomal protein S6 BCc_370 97 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 116515208 Common recB RecB BCc_282 62 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 116515080 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase BCc_140 138 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 116515009 Common hisH HisH BCc_067 215 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 116515233 Common rplQ 50S ribosomal protein L17 BCc_315 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 116515134 Common pykA PykA BCc_198 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 116515102 Common trmU TrmU BCc_166 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 116515284 Common rpsR 30S ribosomal protein S18 BCc_369 213 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 116514999 Common talA transaldolase B BCc_057 119 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 116515275 Common dusA tRNA-dihydrouridine synthase A BCc_358 130 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 116515030 Common ksgA KsgA BCc_089 244 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 116515019 Common thrS ThrS BCc_078 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116514966 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase BCc_017 140 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 116515087 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase BCc_147 185 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 116514956 Common rnpA RnpA BCc_006 20 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 116515183 Common fis DNA-bending protein BCc_252 61 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 116515073 Common lpdA LpdA BCc_133 238 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 116515119 Common ybgI YbgI BCc_183 78 COG0327 COG0327, Uncharacterized conserved protein Function unknown 116515165 Common nusA NusA BCc_232 217 COG0195 NusA, Transcription elongation factor Transcription 116515112 Common yfgB YfgB BCc_176 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 116515100 Common lepB LepB BCc_164 136 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 116515046 Nonpathogen nuoJ NADH dehydrogenase I chain J BCc_105 1 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 116515028 Common nfo Nfo BCc_087 100 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 116515023 Common pheS PheS BCc_082 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 116515178 Common rpsP 30S ribosomal protein S16 BCc_246 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 116515244 Common rplF 50S ribosomal protein L6 BCc_326 217 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 116514983 Common cca tRNA CCA-pyrophosphorylase BCc_038 202 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 116515039 Common nuoB NADH dehydrogenase subunit B BCc_098 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 116515051 Common prsA PrsA BCc_110 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 116515273 Common bioH BioH BCc_356 24 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 116515163 Common rbfA RbfA BCc_230 150 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 116515120 Common sucA 2-oxoglutarate dehydrogenase E1 component BCc_184 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 116515185 Common alaS AlaS BCc_254 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116514953 Common dnaN DNA polymerase III, b subunit BCc_003 107 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 116514970 Common rplJ 50S ribosomal protein L10 BCc_021 64 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 116515004 Common yfcN YfcN BCc_062 46 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 116515224 Common htpG heat shock protein 90 BCc_302 147 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 116515136 Common htpX HtpX BCc_200 180 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 116515063 Common pth Pth BCc_123 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 116514979 Common rpoD RNA polymerase major s factor BCc_034 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 116515195 Common prfB PrfB BCc_269 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 116515161 Common rpsO 30S ribosomal protein S15 BCc_228 213 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 116515095 Common smpB SsrA-binding protein BCc_159 207 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 116515218 Common clpX ATP-dependent protease ATP-binding subunit BCc_294 232 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 116515191 Common polA 5'-3' exonuclease domain of DNA polymerase I BCc_265 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 116515295 Common cyaA CyaA BCc_381 13 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 116515155 Common yceA YceA BCc_222 108 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 116514990 Common fliN FliN BCc_047 110 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 116515206 Common yggB YggB BCc_280 189 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 116515181 Common rplS 50S ribosomal protein L19 BCc_249 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 116515282 Common dut Dut BCc_367 55 COG0756 Dut, dUTPase Nucleotide transport and metabolism 116515262 Common fusA FusA BCc_344 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 116515145 Nonpathogen flgH FlgH BCc_212 1 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 116515114 Common glyA GlyA BCc_178 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 116515300 Common ilvD IlvD BCc_389 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 116514968 Common rpoB RNA polymerase, b subunit BCc_019 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 116515245 Common rpsH 30S ribosomal protein S8 BCc_327 224 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 116515037 Common dnaK DnaK BCc_096 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 116515269 Common rpe Rpe BCc_351 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 116515298 Common rep ATP-dependent DNA helicase BCc_387 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 116515302 Common iscU scaffold protein BCc_392 144 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 116515010 Common hisA HisA BCc_068 213 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 116515085 Common frr Frr BCc_145 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 116515058 Common ahpC AhpC BCc_117 218 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 116515176 Common pheA PheA BCc_244 148 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 116515242 Common rpsE 30S ribosomal protein S5 BCc_324 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 116515272 Common yhgI GNT I transport systemmembrane-bound protein BCc_355 102 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 116515258 Common rplD 50S ribosomal protein L4 BCc_340 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 116515108 Common yciA YciA BCc_172 82 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 116514985 Common gltX GltX BCc_042 248 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 116515044 Common nuoH NADH dehydrogenase I chain H BCc_103 185 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 116515252 Common rplP 50S ribosomal protein L16 BCc_334 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 116514963 Common yhhF YhhF BCc_014 163 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 116515193 Common typA GTP-binding elongation factor family protein BCc_267 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 116515061 Common ydhD YdhD BCc_121 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 116515235 Common rpsD 30S ribosomal protein S4 BCc_317 222 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 116515017 Common sufA FeS assembly scaffold protein BCc_076 65 COG0316 IscA, Uncharacterized conserved protein Function unknown 116515093 Common dnaQ DNA polymerase III, e subunit BCc_156 152 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 116515225 Common adk Adk BCc_303 187 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 116515124 Common tpiA TpiA BCc_188 217 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 116514951 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA BCc_001 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 116515075 Common ftsZ FtsZ BCc_135 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 116515305 Common fdx Fdx BCc_395 81 COG0633 Fdx, Ferredoxin Energy production and conversion 116515083 Common tsf Tsf BCc_143 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 116515034 Common ileS IleS BCc_093 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515077 Common yabC S-adenosyl-dependent methyl transferase BCc_137 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 116515251 Nonpathogen rpmC 50S ribosomal protein L29 BCc_333 1 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 116515271 Common aroK AroK BCc_353 200 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 116514964 Common ftsY FtsY BCc_015 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 116515187 Common zapA ZapA BCc_258 25 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 116515280 Common yggX hypothetical protein BCc_363 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 116515055 Common ackA AckA BCc_114 162 COG0282 ackA, Acetate kinase Energy production and conversion 116515159 Common deaD ATP-dependent RNA helicase BCc_226 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 116515143 Nonpathogen ompA OmpA BCc_210 1 None None None 116515016 Common tyrS TyrS BCc_075 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515215 Common cyoA CyoA BCc_291 111 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 116515099 Common rnc Rnc BCc_163 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 116515293 Nonpathogen yba3 Yba3 BCc_379 1 None None None 116515237 Common rpsM 30S ribosomal protein S13 BCc_319 240 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 116515259 Common rplC 50S ribosomal protein L3 BCc_341 217 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 116515092 Common argS ArgS BCc_152 173 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116514992 Common fliQ FliQ BCc_049 76 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 116515180 Common trmD TrmD BCc_248 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 116515006 Common hisD HisD BCc_064 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 116514974 Nonpathogen secE SecE BCc_025 3 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 116515189 Common glnS glutaminyl-tRNA synthetase BCc_263 231 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 116515152 Common holB DNA polymerase III, d' subunit BCc_219 111 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 116515148 Common rpmF 50S ribosomal protein L32 BCc_215 47 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 116515068 Common pcnB PcnB BCc_128 122 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 116515198 Common miaB MiaB BCc_272 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 116515228 Common ybeD hypothetical protein BCc_307 41 COG2921 COG2921, Uncharacterized conserved protein Function unknown 116515190 Common eno Eno BCc_264 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 116515129 Common serS SerS BCc_193 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515014 Common metG MetG BCc_072 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 116515213 Common cyoC CyoC BCc_289 86 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 116515264 Common rpsL 30S ribosomal protein S12 BCc_346 244 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 116515024 Common pheT PheT BCc_083 226 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 116515104 Common rnb exoribonuclease II BCc_168 188 COG4776 Rnb, Exoribonuclease II Transcription 116514986 Common fliF FliF BCc_043 123 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 116515253 Common rpsC 30S ribosomal protein S3 BCc_335 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 116515042 Common nuoF NADH dehydrogenase I chain F BCc_101 164 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 116515174 Common rpsI 30S ribosomal protein S9 BCc_242 242 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 116514996 Common ppa Ppa BCc_053 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 116515265 Nonpathogen yheL YheL BCc_347 1 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 116515167 Common hflB ATP-dependent protease BCc_235 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 116515110 Common yciL YciL BCc_174 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 116515131 Common infA InfA BCc_195 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 116515231 Common def Def BCc_313 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 116515081 Common map Map BCc_141 222 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 116515138 Common yeaZ YeaZ BCc_202 47 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 116515070 Common secA SecA BCc_130 216 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 116514954 Common dnaA DnaA BCc_004 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 116515292 Common fpr Fpr BCc_378 90 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 116515032 Common carA CarA BCc_091 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 116515307 Nonpathogen yfgM YfgM BCc_397 1 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 116515299 Common ilvC ketol-acid reductoisomerase BCc_388 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 116515101 Common lepA GTP-binding protein LepA BCc_165 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 116514994 Nonpathogen rpmG 50S ribosomal protein L33 BCc_051 1 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 116515064 Common ychF GTP-binding protein BCc_124 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 116515249 Common rplN 50S ribosomal protein L14 BCc_331 236 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 116515157 Common argF ArgF BCc_224 232 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 116515201 Nonpathogen holA DNA polymerase III, d subunit BCc_275 1 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 116515141 Common minC MinC BCc_205 89 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 116515278 Common yggW YggW BCc_361 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 116515267 Common yheN YheN BCc_349 39 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 116515239 Common secY SecY BCc_321 216 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 116515117 Common gapA GapA BCc_181 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 116515021 Common rpmI 50S ribosomal protein L35 BCc_080 134 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 116515106 Common lipA lipoyl synthase BCc_170 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 116515066 Common thrB homoserine kinase BCc_126 103 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 116514981 Common rpsU 30S ribosomal protein S21 BCc_036 150 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 116515127 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase BCc_191 234 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 116515248 Common rplX 50S ribosomal protein L24 BCc_330 157 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 116515219 Common lon DNA-binding ATP-dependent protease La BCc_295 205 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 116515053 Common hemK HemK BCc_112 224 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 116515079 Common ilvI IlvI BCc_139 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 116515229 Common cspE cold shock protein E BCc_308 180 COG1278 CspC, Cold shock proteins Transcription 116514998 Common fabB 3-oxoacyl-(acyl-carrier-protein) synthase I BCc_056 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 116514959 Common groES GroES BCc_010 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 116515212 Nonpathogen cyoD CyoD BCc_288 1 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 116515008 Common hisB imidazole glycerol-phosphate dehydratase/histidinol phosphatase BCc_066 217 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 116515196 Common lysS LysS BCc_270 248 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 116515150 Common fabG 3-oxoacyl-(acyl-carrier protein) reductase BCc_217 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 116515001 Common dapE succinyl-diaminopimelate desuccinylase BCc_059 210 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 116514972 Common rplK 50S ribosomal protein L11 BCc_023 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 116515123 Common pfkA 6-phosphofructokinase BCc_187 160 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 116514988 Common fliH FliH BCc_045 5 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 116515255 Common rpsS 30S ribosomal protein S19 BCc_337 247 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 116515172 Common rpmA 50S ribosomal protein L27 BCc_240 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 116515222 Common dnaX DNA polymerase III, g and t subunits BCc_300 226 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 116515287 Common pgi Pgi BCc_372 171 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 116515049 Common nuoM NADH dehydrogenase I chain M BCc_108 181 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 116515026 Common glyS GlyS BCc_085 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis