Nitrosomonas eutropha C91 plasmid1, complete sequence NC_008341 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 114326558 Common - hypothetical protein Neut_2535 6 None None None 114326562 Common - Conjugal transfer TrbH family protein Neut_2540 3 None None None 114326601 Common - Relaxase/mobilization nuclease family protein Neut_2579 23 None None None 114326597 Common - DNA-directed DNA polymerase Neut_2575 174 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 114326567 Common - UvrD/REP helicase Neut_2545 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 114326606 Common - Cobyrinic acid a,c-diamide synthase Neut_2584 40 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 114326587 Common - MerE family protein Neut_2565 11 None None None 114326595 Common - protein of unknown function DUF159 Neut_2573 89 COG2135 COG2135, Uncharacterized conserved protein Function unknown 114326564 Common - Resolvase, N-terminal domain Neut_2542 134 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 114326604 Common - Lytic transglycosylase, catalytic Neut_2582 28 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 114326577 Common - type II secretion system protein E Neut_2555 150 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 114326585 Common - Resolvase, N-terminal domain Neut_2563 121 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 114326557 Common - Deoxyribonuclease I Neut_2534 26 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 114326593 Common - transcriptional regulator, MerR family Neut_2571 135 COG0789 SoxR, Predicted transcriptional regulators Transcription 114326602 Common - TRAG family protein Neut_2580 71 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 114326591 Common - mercuric transport protein periplasmic component Neut_2569 99 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 114326588 Common - transcriptional regulator, MerR family Neut_2566 11 COG0789 SoxR, Predicted transcriptional regulators Transcription 114326583 Common - type III restriction enzyme, res subunit Neut_2561 49 COG4889 COG4889, Predicted helicase General function prediction only 114326570 Common - mating pair formation protein TrbG Neut_2548 34 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 114326579 Common - TrfA family protein Neut_2557 15 None None None 114326610 Nonpathogen - hypothetical protein Neut_2588 1 None None None 114326560 Common - Resolvase, N-terminal domain Neut_2538 121 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 114326572 Common - trbL protein Neut_2550 36 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 114326609 Common - aldehyde dehydrogenase Neut_2587 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 114326569 Common - hypothetical protein Neut_2547 10 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 114326598 Nonpathogen - hypothetical protein Neut_2576 1 None None None 114326581 Common - transcriptional regulator/antitoxin, MazE Neut_2559 19 COG2336 MazE, Growth regulator Signal transduction mechanisms 114326586 Common - hypothetical protein Neut_2564 9 None None None 114326607 Nonpathogen - hypothetical protein Neut_2585 1 None None None 114326566 Common - AAA ATPase Neut_2544 27 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 114326584 Common - transposase Tn3 family protein Neut_2562 55 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 114326574 Common - CagE, TrbE, VirB component of type IV transporter system Neut_2552 58 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 114326563 Common - Conjugal transfer protein TrbG/VirB9/CagX Neut_2541 39 COG3504 VirB9, Type IV secretory pathway, VirB9 components Intracellular trafficking and secretion 114326600 Common - TraJ protein Neut_2578 15 None None None 114326559 Common - hypothetical protein Neut_2536 13 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 114326596 Common - putative prophage repressor Neut_2574 76 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 114326576 Common - Conjugal transfer protein TrbC Neut_2554 13 COG3838 VirB2, Type IV secretory pathway, VirB2 components (pilins) Intracellular trafficking and secretion 114326568 Common - DNA methylase N-4/N-6 domain protein Neut_2546 128 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 114326571 Common - Conjugal transfer protein Neut_2549 33 COG3701 TrbF, Type IV secretory pathway, TrbF components Intracellular trafficking and secretion 114326582 Common - death-on-curing family protein Neut_2560 66 COG3654 Doc, Prophage maintenance system killer protein General function prediction only 114326594 Common - helicase domain protein Neut_2572 21 COG4889 COG4889, Predicted helicase General function prediction only 114326565 Common - Integrase, catalytic region Neut_2543 22 None None None 114326580 Nonpathogen - hypothetical protein Neut_2558 2 None None None 114326589 Common - mercuric reductase Neut_2567 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 114326578 Common - transcriptional regulator, XRE family Neut_2556 7 COG1396 HipB, Predicted transcriptional regulators Transcription 114326592 Common - Mercuric transport protein MerT Neut_2570 21 None None None 114326605 Common - domain of unknown function DUF1738 Neut_2583 67 COG4227 COG4227, Antirestriction protein DNA replication, recombination, and repair 114326590 Common - MerC mercury resistance protein Neut_2568 9 None None None 114326599 Common - transfer origin protein, TraL Neut_2577 16 COG3640 CooC, CO dehydrogenase maturation factor Cell division and chromosome partitioning 114326575 Common - Conjugal transfer TrbD family protein Neut_2553 15 COG5268 TrbD, Type IV secretory pathway, TrbD component Cell motility and secretion / Intracellular trafficking and secretion 114326603 Common - Type IV secretory pathway protease TraF-like Neut_2581 30 COG4959 TraF, Type IV secretory pathway, protease TraF Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 114326556 Common - transposase Tn3 family protein Neut_2533 53 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 114326573 Common - TrbJ protein Neut_2551 33 COG5314 COG5314, Conjugal transfer/entry exclusion protein Intracellular trafficking and secretion 114326561 Common - conjugation TrbI family protein Neut_2539 58 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 114326608 Common - hypothetical protein Neut_2586 14 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair