Pseudomonas entomophila L48, complete genome NC_008027 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 104779477 Common - transcritpional regulator, LysR family PSEEN0184 23 COG0583 LysR, Transcriptional regulator Transcription 104783893 Common - hypothetical protein PSEEN4967 50 COG3577 COG3577, Predicted aspartyl protease General function prediction only 104784318 Common - oxidoreductase; D-amino acid dehydrogenase PSEEN5419 125 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104784078 Common - hypothetical protein PSEEN5165 5 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 104780158 Common - hypothetical protein PSEEN0936 19 None None None 104782604 Common - probable amino acid permease PSEEN3580 180 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104780641 Common - hypothetical protein PSEEN1458 3 None None None 104782517 Common - probable sulfate transproter, MFS family PSEEN3479 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 104783213 Common - lipoprotein PSEEN4238 31 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 104782882 Common aotM-1 arginine/ornithine transport membrane protein AotM PSEEN3885 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 104783197 Common glnD PII uridylyl-transferase PSEEN4222 124 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 104780921 Common ligA NAD-dependent DNA ligase LigA PSEEN1769 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 104782790 Common - hypothetical protein PSEEN3785 2 None None None 104782123 Common nfxB transcriptional regulator NfxB PSEEN3061 10 None None None 104784134 Pathogen - hypothetical protein PSEEN5224 1 None None None 104781171 Common - aldehyde dehydrogenase PSEEN2032 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104780992 Common - acyltransferase, GNAT family PSEEN1845 54 COG0456 RimI, Acetyltransferases General function prediction only 104781405 Common modA molybdate ABC transporter, periplasmic molybdate-binding protein PSEEN2286 142 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 104782479 Common - ABC transporter, permease protein PSEEN3439 180 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104780093 Pathogen - hypothetical protein PSEEN0866 1 None None None 104780648 Common - hypothetical protein PSEEN1465 21 COG3089 COG3089, Uncharacterized protein conserved in bacteria Function unknown 104783070 Common tolQ biopolymer transport protein TolQ PSEEN4090 145 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 104780814 Common asd aspartate-semialdehyde dehydrogenase PSEEN1653 201 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 104780078 Common - hypothetical protein PSEEN0850 3 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 104780018 Common - hypothetical protein PSEEN0784 1 None None None 104781024 Common - deoxyribonuclease, TatD family PSEEN1879 225 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 104780843 Common - polysaccharide deacetylase PSEEN1685 90 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 104780885 Common - ATPase, MoxR-like protein PSEEN1730 180 COG0714 COG0714, MoxR-like ATPases General function prediction only 104782467 Common - ABC transporter; ATP-binding and memebrane protein PSEEN3426 234 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104784153 Common rpiA ribose-5-phosphate isomerase A PSEEN5243 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 104782080 Common - hypothetical protein PSEEN3017 58 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 104780684 Common wbpV UDP-glucose 4-epimerase PSEEN1504 214 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104781113 Common - transcriptional regulator, MerR family PSEEN1970 101 COG0789 SoxR, Predicted transcriptional regulators Transcription 104783078 Common - hypothetical protein PSEEN4098 21 COG4321 COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis General function prediction only 104780834 Common - hypothetical protein PSEEN1676 61 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 104782187 Common - oxidoreductase, aldo/keto reductase family PSEEN3127 203 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 104780853 Common purF amidophosphoribosyltransferase PSEEN1695 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 104784364 Common - response regulator PSEEN5468 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104783543 Pathogen - hypothetical protein PSEEN4577 1 None None None 104782568 Common - hypothetical protein PSEEN3540 1 None None None 104783685 Common - ring-cleaving dioxygenase PSEEN4741 21 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104783830 Common - hypothetical protein PSEEN4895 7 None None None 104781164 Common - transporter, LysE family PSEEN2025 107 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104780984 Common - heme oxygenase BphO PSEEN1837 18 COG3230 HemO, Heme oxygenase Inorganic ion transport and metabolism 104781717 Common - hypothetical protein PSEEN2619 41 COG4949 COG4949, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 104781433 Pathogen - hypothetical protein PSEEN2318 1 None None None 104782130 Common - Fe uptake ABC transporter, permease protein PSEEN3068 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 104779576 Common - thiosulfate sulfurtransferase (Rhodanese-like protein) PSEEN0295 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 104780066 Common - hypothetical protein PSEEN0836 2 None None None 104781505 Common - hypothetical protein PSEEN2392 25 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104780486 Common - lipoprotein PSEEN1281 2 COG3650 COG3650, Predicted membrane protein Function unknown 104783265 Common lepA GTP-binding protein LepA PSEEN4292 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 104780792 Common - hypothetical protein PSEEN1628 222 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 104781514 Common - hypothetical protein PSEEN2401 93 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104782081 Common ampC beta-lactamase PSEEN3018 48 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 104781527 Common dnaE2 error-prone DNA polymerase PSEEN2415 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 104779758 Common rplB 50S ribosomal protein L2 PSEEN0493 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 104782092 Common - chromate transporter PSEEN3029 114 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 104783580 Common - hypothetical protein PSEEN4621 2 None None None 104782387 Common - transporter, NCS1 family PSEEN3342 33 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 104782815 Common - sensor histidine kinase/response regulator (hybrid) PSEEN3810 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104782621 Common - amidohydrolase PSEEN3598 78 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 104784166 Common - acetyltransferase PSEEN5256 153 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 104781104 Common capA cold shock protein CapA PSEEN1961 179 COG1278 CspC, Cold shock proteins Transcription 104779852 Common nusB transcription antitermination protein NusB PSEEN0592 183 COG0781 NusB, Transcription termination factor Transcription 104780483 Common - hypothetical protein PSEEN1278 1 None None None 104780953 Common ccoN-2 cytochrome c oxidase, cbb3-type, subunit I PSEEN1802 144 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 104779875 Common - hypothetical protein PSEEN0617 38 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 104782124 Common - transcriptional regulator, LysR family PSEEN3062 134 COG0583 LysR, Transcriptional regulator Transcription 104782459 Common - sigma-54 dependent transcriptional regulator PSEEN3417 170 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104783037 Common - transcriptional regulator, ArsR family PSEEN4055 34 COG0640 ArsR, Predicted transcriptional regulators Transcription 104783623 Common pilD type IV pili prepilin peptidase PilD/XcpA PSEEN4668 142 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 104783554 Pathogen - hypothetical protein PSEEN4591 2 None None None 104779902 Common - Type II/IV secretion system protein E PSEEN0648 226 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 104783589 Common - carbon-nitrogen hydrolase PSEEN4630 195 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104783970 Common pilJ type IV pili methyl-accepting chemotaxis transducer PilJ PSEEN5052 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104781503 Pathogen - hypothetical protein PSEEN2390 1 None None None 104783220 Common - CAIB/BAIF family protein PSEEN4246 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 104781649 Common - transporter, MFS family PSEEN2545 146 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780284 Common - 4-carboxymuconolactone decarboxylase pcaC PSEEN1068 89 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 104781444 Common - type II secretion system protein K XcpX-2; signal peptide PSEEN2329 17 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 104781905 Common - hypothetical protein PSEEN2830 13 None None None 104783564 Common - hypothetical protein PSEEN4603 24 COG3223 COG3223, Predicted membrane protein Function unknown 104782438 Common csuD type 1 pili usher protein CsuD PSEEN3395 38 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 104781198 Common - hypothetical protein PSEEN2061 2 None None None 104781159 Common - shikimate 5-dehydrogenase PSEEN2020 212 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 104780070 Common fsr fosmidomycin/multidrug transport protein (MFS superfamily) PSEEN0841 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781300 Common - hypothetical protein PSEEN2169 115 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 104782338 Common - transcriptional regulator, MerR family PSEEN3290 38 COG0789 SoxR, Predicted transcriptional regulators Transcription 104781217 Common - hypothetical protein PSEEN2082 1 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 104780799 Common tyrB aromatic amino acid aminotransferase PSEEN1635 72 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104780021 Common ftsH ATP-dependent metalloprotease FtsH PSEEN0787 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 104784317 Common - hypothetical protein PSEEN5418 9 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 104780410 Common - oxidoreductase molybdopterin-binding PSEEN1202 181 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 104779836 Common - hypothetical protein PSEEN0576 133 COG1733 COG1733, Predicted transcriptional regulators Transcription 104783984 Common phaC1 poly(3-hydroxyalkanoate) polymerase 1 PSEEN5066 72 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 104784444 Common gidB glucose-inhibited division protein B PSEEN5553 204 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 104782163 Common - hypothetical protein PSEEN3102 5 None None None 104780878 Common sbcD exonuclease SbcD PSEEN1722 87 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 104782697 Pathogen - hypothetical protein PSEEN3684 1 None None None 104781234 Common ureF urease accessory protein UreF PSEEN2099 73 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 104783281 Common - ammonia monooxygenase PSEEN4308 54 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 104781344 Common - hypothetical protein PSEEN2219 160 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 104781631 Common - hypothetical protein PSEEN2525 2 None None None 104783941 Common pgk phosphoglycerate kinase PSEEN5022 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 104780463 Common - hypothetical protein PSEEN1258 16 COG3930 COG3930, Uncharacterized protein conserved in bacteria Function unknown 104779849 Common ribC riboflavin synthase subunit alpha PSEEN0589 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 104779473 Common - alkyl sulfate ester ABC transporter AstC, ATP-binding protein PSEEN0180 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 104783571 Common hmgA homogentisate 1,2-dioxygenase PSEEN4612 45 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104780612 Common - hypothetical protein PSEEN1429 2 None None None 104784008 Common pip proline iminopeptidase PSEEN5092 128 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104783714 Common mscL large-conductance mechanosensitive channel PSEEN4771 143 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104781291 Common - transcriptional activator, LysR family PSEEN2159 148 COG0583 LysR, Transcriptional regulator Transcription 104780614 Common - carboxy-terminal protease for penicillin-binding protein 3 Prc PSEEN1431 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 104780032 Common pnp polynucleotide phosphorylase/polyadenylase PSEEN0799 245 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 104782056 Common - drug resistance transporter, EmrB/QacA family PSEEN2992 192 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104784231 Common - alcohol dehydrogenase, zinc-containing PSEEN5326 152 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104783149 Pathogen - hypothetical protein PSEEN4174 1 None None None 104779893 Common mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase PSEEN0636 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 104781150 Common - putative glutathione S-transferase YghU PSEEN2011 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104781421 Common - transporter, LysE family PSEEN2303 76 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104780381 Common - hypothetical protein PSEEN1172 12 None None None 104779555 Common folA dihydrofolate reductase type I, trimethoprim resistance PSEEN0273 147 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 104780972 Common - hypothetical protein PSEEN1823 1 COG5463 COG5463, Predicted integral membrane protein Function unknown 104783249 Common - type II secretion system protein I PSEEN4276 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104783938 Common fda fructose-1,6-bisphosphate aldolase PSEEN5019 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 104779985 Common - phage Tail Collar PSEEN0745 37 COG4675 MdpB, Microcystin-dependent protein Function unknown 104784436 Common atpA F0F1 ATP synthase subunit alpha PSEEN5544 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 104784052 Common - heptose kinase WapP PSEEN5139 5 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 104780258 Common - glycine betaine/carnitine/choline ABC transporter, permease protein PSEEN1041 133 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 104783138 Common gpV pyocin R2_PP, tail spike protein PSEEN4163 18 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 104781473 Common - hypothetical protein PSEEN2359 40 COG1359 COG1359, Uncharacterized conserved protein Function unknown 104783055 Common - methyl-accepting chemotaxis transducer PSEEN4075 138 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780455 Common - sensor histidine kinase/response regulator hybrid PSEEN1249 220 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 104779466 Common - hypothetical protein PSEEN0173 11 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 104782265 Common - hypothetical protein PSEEN3213 1 None None None 104781748 Common kdgD 5-dehydro-4-deoxyglucarate dehydratase PSEEN2658 227 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 104781415 Common ahpF alkyl hydroperoxide reductase subunit F PSEEN2297 247 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 104781923 Common - type II secretion system protein E. PSEEN2848 216 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 104784213 Common gcvH-1 glycine cleavage system protein H PSEEN5308 185 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 104781775 Common - hypothetical protein PSEEN2687 4 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 104779921 Common - transcription regulator heavy metal-dependent MerE family PSEEN0668 149 COG0789 SoxR, Predicted transcriptional regulators Transcription 104783426 Common colS sensor histidine kinase ColS PSEEN4457 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780871 Common - hypothetical protein PSEEN1714 44 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 104784059 Common aceF dihydrolipoamide acetyltransferase PSEEN5146 200 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 104783690 Common - protein farnesyltransferase PSEEN4746 2 COG5029 CAL1, Prenyltransferase, beta subunit Posttranslational modification, protein turnover, chaperones 104780575 Common - alpha-ribazole-5'-phosphate phosphatase CobC PSEEN1386 124 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 104783522 Common - universal stress protein family PSEEN4556 2 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 104780419 Common - hypothetical protein PSEEN1211 1 None None None 104783957 Common metF 5,10-methylenetetrahydrofolate reductase PSEEN5038 146 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 104784359 Common - hypothetical protein PSEEN5463 37 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 104779611 Common - type IV pili biogenesis protein pilP PSEEN0332 5 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 104783680 Common panC pantoate--beta-alanine ligase PSEEN4736 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 104782431 Common - gamma-carboxygeranoyl-CoA hydratase PSEEN3388 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104783424 Common - Lipopolysaccharide kinase InaA PSEEN4455 7 None None None 104782001 Common uppP undecaprenyl pyrophosphate phosphatase PSEEN2933 199 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 104781696 Common mhbM salicylate hydroxylase PSEEN2596 68 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 104780475 Common - hypothetical protein PSEEN1270 1 None None None 104782205 Common aroF-2 phospho-2-dehydro-3-deoxyheptonate aldolase PSEEN3146 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 104782175 Common crtZ beta-carotene hydroxylase PSEEN3115 14 None None None 104782868 Common phnN ATP-binding protein PhnN PSEEN3864 103 COG3709 COG3709, Uncharacterized component of phosphonate metabolism Inorganic ion transport and metabolism 104780204 Common - hypothetical protein PSEEN0983 7 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 104780860 Common fadH 2,4-dienoyl-CoA reductase PSEEN1703 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104782628 Common kdpE transcriptional regulator of kdp operon PSEEN3605 209 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781628 Common - hypothetical protein PSEEN2522 45 COG2236 COG2236, Predicted phosphoribosyltransferases General function prediction only 104780528 Common nrdA ribonucleotide-diphosphate reductase subunit alpha PSEEN1337 228 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 104780375 Common pcaT dicarboxylic acid transport protein; alpha-ketoglutarate permease (MFS superfamily) PSEEN1166 131 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780340 Common - transcriptional regulator (ArsR family) PSEEN1128 48 COG0640 ArsR, Predicted transcriptional regulators Transcription 104783307 Common - hypothetical protein PSEEN4334 13 COG3311 AlpA, Predicted transcriptional regulator Transcription 104780869 Common - hypothetical protein PSEEN1712 20 None None None 104782348 Common - non-ribosomal peptide synthetase PSEEN3301 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104779409 Common - hypothetical protein PSEEN0099 12 None None None 104782530 Common nuoK NADH dehydrogenase subunit K PSEEN3493 165 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 104781741 Common - acetylornithine deacetylase PSEEN2650 209 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 104783165 Common - Peptidase M23B PSEEN4190 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 104779400 Common - hypothetical protein PSEEN0089 1 None None None 104783018 Common - hypothetical protein PSEEN4034 35 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 104783493 Common estB carboxylesterase PSEEN4526 83 COG0400 COG0400, Predicted esterase General function prediction only 104780011 Common grpE heat shock protein GrpE PSEEN0777 230 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 104783756 Common holA DNA polymerase III subunit delta PSEEN4815 116 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 104784259 Common - hypothetical protein PSEEN5357 6 None None None 104780150 Common - inner membrane protein AmpE PSEEN0928 4 COG3725 AmpE, Membrane protein required for beta-lactamase induction Defense mechanisms 104783544 Pathogen - hypothetical protein PSEEN4578 1 None None None 104779998 Common - hypothetical protein PSEEN0763 1 None None None 104783380 Common - glucose ABC transporter, permease protein PSEEN4410 142 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 104780736 Common efp elongation factor P PSEEN1562 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 104783130 Common - pyocin R2_PP, tail sheath protein gpFI PSEEN4155 53 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 104783578 Common - transcriptional regulator, LysR family PSEEN4619 183 COG0583 LysR, Transcriptional regulator Transcription 104784376 Common purE phosphoribosylaminoimidazole carboxylase, mutase subunit PSEEN5480 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 104781098 Common - ribose operon repressor RbsR PSEEN1955 128 COG1609 PurR, Transcriptional regulators Transcription 104780296 Common - hydrolase, carbon-nitrogen hydrolase family PSEEN1080 190 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104782139 Common - clp protease (protease subunit) PSEEN3077 4 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 104781830 Common - oxidoreductase; flavin reductase domain protein PSEEN2748 119 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104781994 Common - hypothetical protein PSEEN2926 16 None None None 104783232 Common rimM 16S rRNA-processing protein PSEEN4259 182 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 104779779 Common rpsD 30S ribosomal protein S4 PSEEN0513 219 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 104780279 Common - response regulator, RegA/PrrA/ActR type PSEEN1063 191 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 104782590 Common - membrane-bound lytic murein transglycosylase D MltD PSEEN3562 149 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 104784414 Common hcnC hydrogen cyanide synthase HcnC PSEEN5520 157 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104782408 Common - hypothetical protein PSEEN3364 11 None None None 104782692 Common - hypothetical protein PSEEN3675 1 None None None 104783766 Common rodA rod shape-determining protein PSEEN4825 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 104779809 Common - hypothetical protein PSEEN0545 2 None None None 104779937 Common recD exonuclease V, alpha subunit PSEEN0693 119 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 104779378 Common - electron transport protein, Sco1/SenC family PSEEN0065 110 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 104781824 Common - photolyase PSEEN2739 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 104783815 Common - hypothetical protein PSEEN4878 213 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104780293 Common - Maf-like protein PSEEN1077 197 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 104784209 Common - hypothetical protein PSEEN5304 2 None None None 104781697 Common - hypothetical protein PSEEN2597 2 None None None 104781935 Pathogen - hypothetical protein PSEEN2862 1 None None None 104779431 Common - hypothetical protein PSEEN0136 13 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 104782518 Common - type II secretion system protein D; signal peptide PSEEN3480 11 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 104784333 Common pyrE orotate phosphoribosyltransferase PSEEN5436 105 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 104780825 Common - cation transporter, VIC family PSEEN1666 104 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 104779933 Common - beta alanine--pyruvate transaminase PSEEN0681 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 104780315 Common ttg2A toluene tolerance ABC efflux transporter, ATP-binding protein PSEEN1099 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 104781582 Pathogen - hypothetical protein PSEEN2472 1 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 104781943 Common - hypothetical protein PSEEN2871 109 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 104784083 Common - hypothetical protein PSEEN5170 51 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 104780303 Common sodM superoxide dismutase PSEEN1087 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 104782398 Common - hypothetical protein PSEEN3354 11 COG3219 COG3219, Uncharacterized protein conserved in bacteria Function unknown 104783964 Common - hypothetical protein PSEEN5046 1 None None None 104782164 Common - amino acid permease PSEEN3103 115 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104781784 Pathogen - hypothetical protein PSEEN2696 1 None None None 104782331 Common - hypothetical protein PSEEN3283 23 COG3608 COG3608, Predicted deacylase General function prediction only 104779663 Common - RNA methyltransferase, TrmH family, group 2 PSEEN0384 162 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 104780494 Common - 3-hydroxyisobutyrate dehydrogenase PSEEN1291 165 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 104780773 Common - low molecular weight phosphotyrosine protein phosphatase PSEEN1606 140 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 104781802 Pathogen - hypothetical protein PSEEN2715 1 None None None 104779444 Common - transcriptional factor-related protein PSEEN0150 11 COG1438 ArgR, Arginine repressor Transcription 104781039 Common - hypothetical protein PSEEN1894 38 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 104783402 Common - Subtilisin-like serine protease PSEEN4433 54 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 104781351 Common - site-specific recombinase, integrase family PSEEN2226 23 None None None 104779330 Common glyS glycyl-tRNA synthetase subunit beta PSEEN0016 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 104781950 Common - glycerate kinase PSEEN2878 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 104782761 Common acnA aconitate hydratase PSEEN3756 222 COG1048 AcnA, Aconitase A Energy production and conversion 104783819 Common oprC outer membrane copper receptor OprC PSEEN4883 96 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104783888 Common psd phosphatidylserine decarboxylase PSEEN4961 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 104781054 Common - 6-pyruvoyl tetrahydrobiopterin synthase SscR PSEEN1910 130 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 104779966 Common - acetyltransferase, GNAT family PSEEN0723 104 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 104780693 Common - MFS transporter PSEEN1514 35 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780679 Common - glycosyltransferase PSEEN1499 84 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104781556 Common - serine O-acetyltransferase PSEEN2446 157 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 104779323 Common - hypothetical protein PSEEN0008 88 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 104781383 Pathogen - hypothetical protein PSEEN2263 1 None None None 104781373 Common - acetyltransferase, GNAT family PSEEN2252 11 COG0456 RimI, Acetyltransferases General function prediction only 104784445 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA PSEEN5554 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 104783996 Common tatA twin argininte translocase protein A PSEEN5078 24 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 104779782 Common katA catalase (hydroperoxidase II)KatA PSEEN0517 128 COG0753 KatE, Catalase Inorganic ion transport and metabolism 104784385 Common - ABC transporter, periplasmic polyamine-binding protein PSEEN5489 132 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104781534 Common - transcriptional regulator, LacI family PSEEN2422 123 COG1609 PurR, Transcriptional regulators Transcription 104780531 Common - phosphopantetheinyl transferase component of siderophore synthetase PSEEN1341 37 COG2977 EntD, Phosphopantetheinyl transferase component of siderophore synthetase Secondary metabolites biosynthesis, transport, and catabolism 104781394 Pathogen - hypothetical protein PSEEN2274 1 None None None 104780129 Common - ribosomal RNA small subunit methyltransferase C PSEEN0906 115 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 104781768 Common - hypothetical protein PSEEN2680 5 None None None 104779484 Common - fatty acid desaturase PSEEN0196 66 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 104781034 Common oprI outer membrane lipoprotein OprI PSEEN1889 1 None None None 104784200 Common potF-1 putrescine ABC transporter, periplasmic putrescine-binding protein PSEEN5294 133 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104779670 Common typA Regulatory protein TypA PSEEN0392 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 104781205 Common - cytochrome b561 PSEEN2068 10 COG3038 CybB, Cytochrome B561 Energy production and conversion 104779425 Common gcdH glutaryl-CoA dehydrogenase PSEEN0120 161 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104782145 Common - hypothetical protein PSEEN3084 64 COG2170 COG2170, Uncharacterized conserved protein Function unknown 104780221 Common yajC preprotein translocase subunit YajC PSEEN1001 174 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 104779956 Common - hypothetical protein PSEEN0713 44 COG1359 COG1359, Uncharacterized conserved protein Function unknown 104783048 Common - hypothetical protein PSEEN4067 215 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 104781761 Common mdtA multidrug resistance efflux pump; membrane fusion protein PSEEN2673 159 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104779417 Common - hypothetical protein PSEEN0110 3 None None None 104779898 Pathogen - hypothetical protein PSEEN0642 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 104780574 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase PSEEN1385 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 104782715 Common - heavy metal sensor histidine kinase PSEEN3705 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780959 Common - hypothetical protein PSEEN1810 52 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 104779864 Common - hypothetical protein PSEEN0604 26 COG2845 COG2845, Uncharacterized protein conserved in bacteria Function unknown 104781845 Common - methyltransferase PSEEN2763 22 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 104780512 Common - Zinc-dependent hydrolase PSEEN1309 94 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 104780672 Common cmk cytidylate kinase PSEEN1491 205 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 104779860 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase PSEEN0600 216 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 104780203 Common - Methionine--tRNA ligase PSEEN0982 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104782904 Common - two-component response regulator PSEEN3908 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104783933 Common - hypothetical protein PSEEN5013 192 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 104783142 Common - phage tail fiber assembly protein PSEEN4167 10 None None None 104779566 Common - hypothetical protein PSEEN0284 129 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 104780103 Common murI glutamate racemase PSEEN0879 191 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 104780971 Common - hypothetical protein PSEEN1822 24 COG3766 COG3766, Predicted membrane protein Function unknown 104783100 Common - hypothetical protein PSEEN4124 1 None None None 104783787 Common - transferase; LpxA family PSEEN4849 212 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 104781358 Common - hypothetical protein PSEEN2234 1 None None None 104781856 Common - transcription regulator, AraC family PSEEN2775 126 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104780237 Common - radical SAM enzyme, Cfr family PSEEN1018 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 104783780 Common pbpC penicillin-binding protein 1C PSEEN4842 200 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 104779842 Common - hypothetical protein PSEEN0582 13 None None None 104780122 Common - hypothetical protein PSEEN0898 17 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 104783455 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase PSEEN4487 210 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 104783277 Common - porin, OprD family PSEEN4304 10 None None None 104781803 Common - non-ribosomal peptide synthetase PSEEN2716 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783500 Common - hypothetical protein PSEEN4534 86 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 104782908 Common - potassium uptake protein, TrkH family PSEEN3912 163 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 104781130 Common mltG mannitol ABC transporter, permease protein PSEEN1991 151 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 104784353 Common - hypothetical protein PSEEN5457 7 None None None 104781900 Common alkB oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, repair of alkylated DNA PSEEN2825 56 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 104780446 Common - ABC transporter, permease protein PSEEN1239 179 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 104784308 Common - diguanylate cyclase (GGDEF domain) PSEEN5409 175 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104782918 Common recQ ATP-dependent DNA helicase PSEEN3922 220 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 104780900 Common - hypothetical protein PSEEN1748 12 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104783365 Common - hypothetical protein PSEEN4395 20 COG0730 COG0730, Predicted permeases General function prediction only 104782314 Common - metallo-dependent hydrolase PSEEN3265 113 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 104779453 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSEEN0160 130 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 104782636 Common - hydrolase, alpha/beta fold family PSEEN3613 144 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104780930 Pathogen - hypothetical protein PSEEN1779 1 None None None 104783665 Common - hypothetical protein PSEEN4719 36 COG3016 PhuW, Uncharacterized iron-regulated protein Function unknown 104780913 Common aqpZ aquaporin Z PSEEN1761 122 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 104783175 Common eno phosphopyruvate hydratase PSEEN4200 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 104779534 Common rmlD dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) PSEEN0250 169 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 104782799 Common cheZ chemotactic response, CheY protein phophatase PSEEN3794 45 COG3143 CheZ, Chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780566 Common - hypothetical protein PSEEN1377 2 None None None 104780145 Common - putative sulfate transport protein CysZ PSEEN0923 42 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 104783860 Common rpsF 30S ribosomal protein S6 PSEEN4930 196 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 104780897 Common rraA ribonuclease activity regulator protein RraA PSEEN1744 89 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 104781399 Common - signal transduction protein PSEEN2280 64 COG0467 RAD55, RecA-superfamily ATPases implicated in signal transduction Signal transduction mechanisms 104782511 Common gabP-1 gamma-aminobutyrate permease PSEEN3473 113 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104780349 Common - hypothetical protein PSEEN1138 4 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104780262 Common - hypothetical protein PSEEN1045 15 COG4683 COG4683, Uncharacterized protein conserved in bacteria Function unknown 104783829 Common - acetyl transferase, GNAT family PSEEN4894 33 COG0456 RimI, Acetyltransferases General function prediction only 104782685 Common - siderophore interacting protein PSEEN3668 63 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 104781126 Common mtlZ Fructokinase PSEEN1987 100 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 104781055 Common - hypothetical protein PSEEN1911 14 None None None 104781297 Common - hypothetical protein PSEEN2166 1 None None None 104782932 Common - hypothetical protein PSEEN3937 50 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104779873 Common - hypothetical protein PSEEN0615 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 104782863 Common - benzoate membrane transport protein, MFS superfamily PSEEN3859 60 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 104780395 Common glpM membrane protein required for efficient alginate biosynthesis PSEEN1187 14 COG3136 GlpM, Uncharacterized membrane protein required for alginate biosynthesis General function prediction only 104783871 Common - hypothetical protein PSEEN4942 226 COG2262 HflX, GTPases General function prediction only 104784286 Common - magnesium chelatase subunit D PSEEN5385 187 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 104781306 Common - activation/secretion protein, TPS family PSEEN2176 39 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 104783858 Common - hypothetical protein PSEEN4928 9 None None None 104782181 Common - acetyltransferase, GNAT family PSEEN3121 28 COG3153 COG3153, Predicted acetyltransferase General function prediction only 104780460 Common lysS lysyl-tRNA synthetase PSEEN1255 246 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 104781963 Common - hypothetical protein PSEEN2892 3 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 104781616 Common - hypothetical protein PSEEN2508 1 None None None 104782037 Common - multidrug efflux RND membrane fusion protein PSEEN2970 159 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104781877 Common paaK ring-hydroxylation complex protein 4 PSEEN2802 155 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 104784175 Common - hypothetical protein PSEEN5265 1 None None None 104783740 Common rluE pseudouridylate synthase PSEEN4798 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 104783897 Common - metallo-phosphoesterase PSEEN4971 81 COG1409 Icc, Predicted phosphohydrolases General function prediction only 104782922 Common - Type I secretion outer membrane protein, TolC PSEEN3927 129 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104781455 Common - porin, OprD family PSEEN2340 9 None None None 104783480 Common - hypothetical protein PSEEN4512 78 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 104781465 Pathogen - hypothetical protein PSEEN2351 2 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 104779854 Common pgpA phosphatidylglycerophosphatase A PSEEN0594 105 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 104783122 Common - Mu-like phage protein gp38 PSEEN4147 5 None None None 104782972 Common - hypothetical protein PSEEN3981 13 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 104782805 Common flhB flagellar biosynthesis protein FlhB PSEEN3800 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 104780465 Common - hypothetical protein PSEEN1260 2 None None None 104780338 Common - hypothetical protein PSEEN1126 1 None None None 104781115 Pathogen - hypothetical protein PSEEN1973 1 None None None 104780179 Common cyoC cytochrome o ubiquinol oxidase subunit III PSEEN0958 158 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 104782809 Common fliO flagellar assembly protein FliO PSEEN3804 17 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 104780758 Common - hypothetical protein PSEEN1587 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 104781892 Common - hypothetical protein PSEEN2817 24 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 104783292 Common phaG (R)-3-hydroxydecanoyl-ACP:CoA transacylase (3-hydroxyacyl-CoA-acyl carrier protein transferase) PSEEN4319 9 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104781280 Pathogen - hypothetical protein PSEEN2148 1 None None None 104783723 Common trmA tRNA (uracil-5-)-methyltransferase PSEEN4780 187 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 104782522 Common nuoB NADH dehydrogenase subunit B PSEEN3485 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 104780130 Common - glycerate dehydrogenase PSEEN0907 230 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 104782109 Common - transcriptional regulator, LysR family PSEEN3046 175 COG0583 LysR, Transcriptional regulator Transcription 104780720 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC PSEEN1546 174 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104782945 Common - transporter with mechanosensitive ion channel. PSEEN3952 57 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104782953 Common - hypothetical protein PSEEN3960 1 None None None 104784291 Common - hypothetical protein PSEEN5391 1 None None None 104782817 Common fliJ flagellar biosynthesis chaperone PSEEN3812 41 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 104783106 Common - phage protein PSEEN4130 1 None None None 104783201 Common - hypothetical protein PSEEN4226 106 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 104780596 Common hscC chaperone protein HscC PSEEN1412 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 104782896 Common rluB ribosomal large subunit pseudouridine synthase B PSEEN3900 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 104780401 Common gltI glutamate/aspartate ABC transporter, periplasmic binding protein PSEEN1193 140 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104779522 Common - DNA-binding response regulator, LuxR family PSEEN0237 197 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104779826 Common fdnI formate dehydrogenase-O, cytochrome B556 (FDO) subunit PSEEN0566 70 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 104784390 Common oadA pyruvate carboxylase subunit B PSEEN5495 196 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 104779819 Common - hypothetical protein PSEEN0558 2 None None None 104783398 Common argF ornithine carbamoyltransferase PSEEN4429 239 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 104783367 Common xseA exodeoxyribonuclease VII large subunit PSEEN4397 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 104783605 Common - carbon-nitrogen hydrolase PSEEN4647 21 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104782986 Common - hypothetical protein PSEEN4001 1 None None None 104783801 Common purD phosphoribosylamine--glycine ligase PSEEN4864 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 104783305 Common - FecR-like transmembrane sensor PSEEN4332 44 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104780858 Common - transcriptional regulator, AraC family PSEEN1701 72 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104782930 Pathogen - hypothetical protein PSEEN3935 1 None None None 104779637 Common - glycosyl transferase, group 2 family PSEEN0358 93 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104783355 Pathogen - hypothetical protein PSEEN4384 1 None None None 104782969 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN3978 41 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 104781275 Common - multidrug efflux protein, MatE family PSEEN2142 114 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 104783391 Common - TonB-dependent outer membrane heme receptor PSEEN4422 127 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104782304 Common dht dihydropyrimidinase PSEEN3253 199 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 104783393 Common - hypothetical protein PSEEN4424 83 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 104783738 Common - transcriptional regulator, AsnC family PSEEN4796 148 COG1522 Lrp, Transcriptional regulators Transcription 104782810 Common fliN flagellar motor switch protein PSEEN3805 122 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 104782917 Common - transcriptional regulator, MarR family PSEEN3921 99 COG1846 MarR, Transcriptional regulators Transcription 104780444 Common hicA-1 hypothetical protein PSEEN1237 23 None None None 104781661 Common - cytochrome c PSEEN2557 50 COG2863 COG2863, Cytochrome c553 Energy production and conversion 104782117 Common hpd 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase) PSEEN3054 78 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 104783488 Common algW HtrA-like serine protease AlgW PSEEN4521 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 162139699 Common - hypothetical protein PSEEN4018 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 104782278 Common - hypothetical protein PSEEN3227 29 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 104779871 Common rtcR sigma-54 dependent transcriptional regulator RtcR PSEEN0613 164 COG4650 RtcR, Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 104784307 Common - multidrug efflux protein NorA PSEEN5408 179 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 104783287 Common - Lipoprotein PSEEN4314 1 None None None 104783648 Common - virulence factor MviN family PSEEN4694 194 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 104783016 Common - nitroreductase PSEEN4032 69 COG0778 NfnB, Nitroreductase Energy production and conversion 104781385 Common - sensor box protein PSEEN2265 150 COG2202 AtoS, FOG: PAS/PAC domain Signal transduction mechanisms 104780355 Common - hypothetical protein PSEEN1144 19 None None None 104784296 Common - hypothetical protein PSEEN5396 24 COG3224 COG3224, Uncharacterized protein conserved in bacteria Function unknown 104779459 Common - hypothetical protein PSEEN0166 195 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104779689 Common rpsU 30S ribosomal protein S21 PSEEN0416 90 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 104779752 Common fusA-1 elongation factor G PSEEN0486 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 104783192 Common frr ribosome recycling factor PSEEN4217 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 104779320 Common gyrB DNA gyrase subunit B PSEEN0004 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 104780890 Common - hypothetical protein PSEEN1736 120 COG0579 COG0579, Predicted dehydrogenase General function prediction only 104784277 Common - ammonium transporter PSEEN5375 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 104783310 Common - hypothetical protein PSEEN4338 36 COG3762 COG3762, Predicted membrane protein Function unknown 104781210 Common - oxidoreductase, short chain dehydrogenase/reductase family PSEEN2074 179 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783467 Common - lipoprotein PSEEN4499 70 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 104781730 Common - hydrolase, TatD family PSEEN2638 27 COG1099 COG1099, Predicted metal-dependent hydrolases with the TIM-barrel fold General function prediction only 104779532 Common - sigma-54 dependent response regulator PSEEN0248 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104779743 Common nusG transcription antitermination protein NusG PSEEN0477 215 COG0250 NusG, Transcription antiterminator Transcription 104781760 Common tpx thiol peroxidase PSEEN2672 97 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 104781601 Common bauA TonB-dependent siderophore receptor BauA PSEEN2492 90 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104781338 Common lolA outer-membrane lipoprotein carrier protein PSEEN2213 84 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 104779907 Common - DNA-binding response regulator, LuxR family PSEEN0653 211 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104781682 Common - Zinc-dependent hydroxylase PSEEN2582 76 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 104782078 Common - hydrolase, haloacid dehalogenase-like family PSEEN3015 107 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 104780137 Common - hydrolase; metallo-beta-lactamase family protein PSEEN0914 216 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 104780546 Common - hypothetical protein PSEEN1357 1 None None None 104782845 Common flgC flagellar basal body rod protein FlgC PSEEN3841 124 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 104779517 Common hslR heat shock protein 15, ribosome associated PSEEN0231 103 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 104780311 Common - hypothetical protein PSEEN1095 58 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 104779711 Common - polyamine ABC transporter, ATP-binding protein PSEEN0438 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104783334 Common - porin, OprD family PSEEN4363 7 None None None 104781914 Common - curli assembly protein CsgE PSEEN2839 8 None None None 104782246 Common - hypothetical protein PSEEN3191 1 None None None 104783084 Common proS prolyl-tRNA synthetase PSEEN4105 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104781493 Common - dihydrodipicolinate synthase PSEEN2380 232 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 104779625 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSEEN0346 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779988 Common cycC-2 adenosine 5'-phosphosulfate kinase PSEEN0748 141 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 104781710 Common - transcriptional regulator, AraC family PSEEN2611 140 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104782448 Common - periplasmic sugar-binding protein PSEEN3405 54 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 104779326 Common - oxidoreductase, GMC family PSEEN0012 93 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 104782662 Common sdhB succinate dehydrogenase iron-sulfur subunit PSEEN3641 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 104780662 Common - hypothetical protein PSEEN1481 6 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 104782351 Common - hypothetical protein PSEEN3304 23 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 104779946 Pathogen - hypothetical protein PSEEN0703 1 None None None 104781065 Common - transcriptional regulator, AraC family PSEEN1921 109 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783377 Common - hypothetical protein PSEEN4407 51 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 104783634 Common rluD 23S rRNA pseudouridine synthase PSEEN4680 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 104779843 Common - hypothetical protein PSEEN0583 1 None None None 104782358 Common - hypothetical protein PSEEN3311 19 COG4702 COG4702, Uncharacterized conserved protein Function unknown 104784426 Common - acyl carrier protein PSEEN5533 23 None None None 104784243 Common - hypothetical protein PSEEN5341 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 104780721 Common - enoyl-CoA hydratase PSEEN1547 75 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104780305 Common - phosphocarrier protein (HPr-like) NPr PSEEN1089 146 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 104779830 Common - L-asparaginase, type I PSEEN0570 87 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 104782839 Common flgH flagellar basal body L-ring protein PSEEN3835 101 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 104783617 Common - hypothetical protein PSEEN4662 25 COG4933 COG4933, Uncharacterized conserved protein Function unknown 104781644 Pathogen - hypothetical protein PSEEN2540 1 None None None 104782273 Common - aminotransferase, class V PSEEN3221 178 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 104783430 Common groES co-chaperonin GroES PSEEN4461 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 104784282 Common mgtA P-type ATPase, Mg2+ ATPase transporter PSEEN5381 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 104781567 Common - amino acid transporter, periplasmic amino acid-binding protein PSEEN2457 58 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 104782598 Common - hypothetical protein PSEEN3573 1 None None None 104779706 Common - nucleotidyltransferase PSEEN0433 228 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 104783840 Common - hypothetical protein PSEEN4906 50 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 104782489 Common gacA response regulator GacA (Global antibiotic and cyanide control protein, LuxR/UhpA family) PSEEN3450 211 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104780184 Common - hydrolase; predicted phosphatase PSEEN0963 175 COG0546 Gph, Predicted phosphatases General function prediction only 104781011 Common - hypothetical protein PSEEN1866 1 None None None 104784387 Common - transcriptional regulator PSEEN5492 60 COG2808 PaiB, Transcriptional regulator Transcription 104784202 Common - putative aminotransferase PSEEN5296 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 104781325 Common purB adenylosuccinate lyase PSEEN2198 224 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 104781352 Common - hypothetical protein PSEEN2227 2 None None None 104781364 Common - LuxR family DNA binding protein PSEEN2243 1 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104781061 Common - transcriptional regulator, LysR family PSEEN1917 175 COG0583 LysR, Transcriptional regulator Transcription 104781040 Common cysB transcriptional regulator CysB PSEEN1895 189 COG0583 LysR, Transcriptional regulator Transcription 104779381 Common - D-methionine ABC transporter MetN, ATP-binding protein PSEEN0068 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 104784374 Common - hypothetical protein PSEEN5478 41 COG2261 COG2261, Predicted membrane protein Function unknown 104780192 Pathogen - hypothetical protein PSEEN0971 1 None None None 104782377 Common - transporter, LysE family PSEEN3330 104 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104784035 Common bioB biotin synthetase PSEEN5121 182 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 104782234 Pathogen - hypothetical protein PSEEN3178 1 None None None 104780669 Common serC phosphoserine aminotransferase PSEEN1488 114 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 104782222 Common - serine/threonine protein phosphatase PSEEN3165 83 COG3855 Fbp, Uncharacterized protein conserved in bacteria Carbohydrate transport and metabolism 104782248 Common - transporter, MFS family PSEEN3193 69 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 104780491 Common livK branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN1286 141 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 104783093 Common - hypothetical protein PSEEN4117 31 COG4807 COG4807, Uncharacterized protein conserved in bacteria Function unknown 104780336 Common - chromosome replication initiation inhibitor protein PSEEN1124 90 COG0583 LysR, Transcriptional regulator Transcription 104782898 Common - hypothetical protein PSEEN3902 146 COG1354 COG1354, Uncharacterized conserved protein Function unknown 104780706 Common aroC chorismate synthase PSEEN1529 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 104780072 Common - DNA-3-methyladenine glycosylase PSEEN0843 112 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 104780701 Common - hypothetical protein PSEEN1523 1 None None None 104782198 Common catB muconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE) PSEEN3138 137 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 104782414 Common - transporter, LysE family PSEEN3370 24 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104779654 Common betT Choline transporter BetT PSEEN0375 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 104782426 Common metH B12-dependent methionine synthase PSEEN3382 179 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 104781047 Common prpB 2-methylisocitrate lyase PSEEN1902 116 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 104783319 Common - hypothetical protein PSEEN4347 1 None None None 104782258 Common - chemotaxis protein methyltransferase, CheR-like PSEEN3204 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 104779546 Common - TonB-dependent siderophore receptor PSEEN0263 119 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 104779529 Common nudE ADP-ribose diphosphatase NudE PSEEN0245 141 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104779640 Common - acyl carrier protein PSEEN0361 42 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104783979 Common pyrB aspartate carbamoyltransferase catalytic subunit PSEEN5061 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 104779796 Common - hypothetical protein PSEEN0531 23 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 104782320 Common - hypothetical protein PSEEN3271 19 COG4944 COG4944, Uncharacterized protein conserved in bacteria Function unknown 104780086 Common ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase PSEEN0858 183 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 104782023 Common - NAD-dependent aldehyde dehydrogenase PSEEN2956 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104780503 Common - efflux transporter, membrane fusion protein PSEEN1300 151 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104780366 Common - hypothetical protein PSEEN1155 76 COG0433 COG0433, Predicted ATPase General function prediction only 104781867 Common phaA enoyl-CoA hydratase-isomerase PSEEN2791 188 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104779887 Common - acetyltransferase, GNAT family PSEEN0630 25 COG0456 RimI, Acetyltransferases General function prediction only 104784327 Common - periplasmic binding protein PSEEN5430 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 104782155 Common hpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (CHMS dehydrogenase) PSEEN3094 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104782757 Common - hypothetical protein PSEEN3752 1 None None None 104781865 Common paaX transcriptional repressor for phenylacetic acid degradation PSEEN2789 33 COG3327 PaaX, Phenylacetic acid-responsive transcriptional repressor Transcription 104780471 Common - glycoprotein endopeptidase metalloprotease PSEEN1266 180 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 104779439 Common - type I toxin efflux membrane fusion protein PSEEN0145 132 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104780716 Common - hypothetical protein PSEEN1542 1 None None None 104779767 Common rplE 50S ribosomal protein L5 PSEEN0502 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 104781814 Common - lipoprotein PSEEN2728 1 None None None 104781798 Common - hypothetical protein PSEEN2711 49 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104784091 Common - hypothetical protein PSEEN5179 1 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 104783004 Common - transporter, MFS family PSEEN4019 214 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104779760 Common rplV 50S ribosomal protein L22 PSEEN0495 224 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 104780960 Common - exonuclease PSEEN1811 14 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 104783847 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSEEN4914 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 104783675 Common crbA sensory box histidine kinase CrbA PSEEN4729 223 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 104781574 Common lpsI acetoacetyl-CoA transferase, alpha subunit PSEEN2464 100 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 104784045 Common - RNA polymerase sigma factor PSEEN5131 77 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104782017 Common - hypothetical protein PSEEN2950 1 None None None 104781312 Common - enoyl-CoA hydratase PSEEN2183 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104782291 Common - cation ABC transporter, ATP-binding protein PSEEN3240 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 104783747 Common - hypothetical protein PSEEN4805 83 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 104782366 Common - ammonia monooxygenase PSEEN3319 24 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 104782296 Common - NAD(P)H quinone oxidoreductase PSEEN3245 94 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 104783180 Common dnaE DNA polymerase III subunit alpha PSEEN4205 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 104782327 Common - hypothetical protein PSEEN3279 4 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 104781610 Common basC L-lysine 6-monooxygenase (NADPH) PSEEN2502 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 104781020 Common - hypothetical protein PSEEN1875 1 COG5607 COG5607, Uncharacterized conserved protein Function unknown 104780765 Common - ABC transporter, ATP-binding protein PSEEN1596 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 104780321 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase PSEEN1105 212 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 104782540 Common - hypothetical protein PSEEN3503 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 104779925 Common - multidrug resistance transporter, Bcr/CflA family PSEEN0672 227 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781286 Common - non-ribosomal peptide synthetase PSEEN2154 217 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783447 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PSEEN4479 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 104779657 Common ctpA Carboxy-terminal processing protease precursor PSEEN0378 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 104780746 Common - ATP-dependent RNA helicase, DEAD box family PSEEN1572 230 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 104783471 Common petC ubiquinol--cytochrome c reductase, cytochrome c1 PSEEN4503 44 COG2857 CYT1, Cytochrome c1 Energy production and conversion 104780767 Common - hypothetical protein PSEEN1598 47 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 104779344 Common aroE shikimate 5-dehydrogenase PSEEN0031 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 104782679 Common - hypothetical protein PSEEN3662 1 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 104780686 Common - dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase WbpM PSEEN1506 147 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104783915 Common - hypothetical protein PSEEN4991 4 None None None 104784187 Common - TonB-like protein PSEEN5280 24 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 104779397 Common - signal transduction protein; EAL domain protein PSEEN0085 163 COG4943 COG4943, Predicted signal transduction protein containing sensor and EAL domains Signal transduction mechanisms 104779504 Common ssuA sulfonate ABC transporter, periplasmic sulfonate-binding protein SsuA PSEEN0218 112 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104780604 Common - hypothetical protein PSEEN1420 72 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104781068 Common - ABC transporter, ATP-binding protein PSEEN1924 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 104779367 Common - sulfate transporter PSEEN0054 153 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 104779382 Common - lipoprotein PSEEN0069 1 None None None 104781092 Common endA DNA-specific endonuclease I PSEEN1949 30 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 104783462 Common - hypothetical protein PSEEN4494 137 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 104782784 Common ccmD cytochrome c-type biogenesis protein CcmD PSEEN3779 2 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 104782994 Common aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein PSEEN4009 29 COG4579 COG4579, Isocitrate dehydrogenase kinase/phosphatase Signal transduction mechanisms 104780276 Common dppA-3 dipeptide ABC transporter, periplasmic peptide-binding protein PSEEN1060 209 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 104782647 Common - methyl-accepting chemotaxis transducer PSEEN3624 119 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104783824 Common - branched-chain amino acid ABC transporter, permease protein PSEEN4889 108 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 104782954 Common - transcriptional regulator, LysR family PSEEN3961 162 COG0583 LysR, Transcriptional regulator Transcription 104783955 Pathogen - hypothetical protein PSEEN5036 1 None None None 104782966 Common fadD2 acyl-CoA synthetase PSEEN3975 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104783778 Common - hypothetical protein PSEEN4840 34 COG4642 COG4642, Uncharacterized protein conserved in bacteria Function unknown 104780735 Common - hypothetical protein PSEEN1561 23 COG4394 COG4394, Uncharacterized protein conserved in bacteria Function unknown 104781224 Common - DNA-binding response regulator PSEEN2089 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781485 Common katG catalase; hydroperoxidase HPI(I) PSEEN2372 98 COG0376 KatG, Catalase (peroxidase I) Inorganic ion transport and metabolism 104783081 Common - hypothetical protein PSEEN4101 23 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 104784025 Common - acetylornithine aminotransferase PSEEN5110 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 104781793 Common - hypothetical protein PSEEN2706 26 None None None 104783998 Common tatC twin aqrginine translocase protein subunit C PSEEN5080 203 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 104784407 Common - cobalamin synthesis protein/P47K family protein PSEEN5513 129 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 104781001 Common - transcriptional regulator, AsnC family PSEEN1854 135 COG1522 Lrp, Transcriptional regulators Transcription 104780927 Common - hypothetical protein PSEEN1776 1 None None None 104782549 Common - lipoprotein PSEEN3512 13 COG5608 COG5608, Conserved secreted protein Function unknown 104783532 Common - FecR-like transmembrane sensor PSEEN4566 49 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104780941 Common recR recombination protein RecR PSEEN1790 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 104780197 Common - hydrolase PSEEN0976 5 COG0546 Gph, Predicted phosphatases General function prediction only 104782777 Common - D-isomer specific 2-hydroxyacid dehydrogenase PSEEN3772 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 104783358 Common - periplasmic binding domain/transglycosylase SLT domain fusion protein PSEEN4388 134 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 104781255 Pathogen - hypothetical protein PSEEN2120 4 None None None 104781547 Common - hypothetical protein PSEEN2436 1 None None None 104779475 Common - aryl sulfate ester ABC transporter AstR, periplasmic binding protein PSEEN0182 77 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104783330 Common ttgR transcriptional regulator TtgR for multidrug efflux pump (TetR/AcrR family) PSEEN4359 113 COG1309 AcrR, Transcriptional regulator Transcription 104783303 Common - hypothetical protein PSEEN4330 14 None None None 104780555 Common - hypothetical protein PSEEN1366 30 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 104783560 Common - hypothetical protein PSEEN4597 57 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104783242 Common - hydrolase, MutT/nudix family protein PSEEN4269 119 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 104780095 Pathogen - hypothetical protein PSEEN0870 1 None None None 104779814 Pathogen - hypothetical protein PSEEN0552 1 None None None 104781890 Common - Dyp-type peroxidase PSEEN2815 54 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 104784068 Common - hypothetical protein PSEEN5155 5 None None None 104782855 Common - glutamine synthetase PSEEN3851 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104783116 Common - Mu-like phage DNA circulation protein PSEEN4141 21 COG4228 COG4228, Mu-like prophage DNA circulation protein General function prediction only 104780646 Common - short chain dehydrogenase PSEEN1463 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 104780113 Common - hypoxanthine-guanine phosphoribosyltransferase PSEEN0889 84 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 104780841 Common allA ureidoglycolate hydrolase PSEEN1683 35 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 104784400 Common - hypothetical protein PSEEN5506 6 None None None 104782361 Common - hypothetical protein PSEEN3314 27 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 104782332 Common aotP-2 arginine/ornithine transport protein AotP PSEEN3284 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 104782374 Pathogen - hypothetical protein PSEEN3327 1 None None None 104781617 Common - hypothetical protein PSEEN2509 3 None None None 104783717 Common - nucleotide methyltransferase PSEEN4774 83 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 104779718 Common estA Esterase estA precursor PSEEN0445 41 COG3240 COG3240, Phospholipase/lecithinase/hemolysin Lipid metabolism / General function prediction only 104781658 Common - methylamine utilization protein MauD PSEEN2554 21 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 104784121 Common - amino acid ABC transporter, permease protein PSEEN5210 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 104782506 Common - acetyltransferase, GNAT family PSEEN3468 36 COG0456 RimI, Acetyltransferases General function prediction only 104780783 Common fabD malonyl-CoA-[acyl-carrier-protein] transacylase PSEEN1617 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 104779976 Common - magnesium/cobalt transporter, CorA family PSEEN0735 34 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 104782746 Common - sensor histidine kinase PSEEN3739 149 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 104780052 Common fklB FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) PSEEN0821 139 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 104780212 Common selD selenophosphate synthetase PSEEN0991 134 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 104783705 Common hasF heme acquisition outer membrane efflux protein HasF PSEEN4762 104 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104782574 Common fadFx acyl-CoA dehydrogenase protein FadFx PSEEN3546 166 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104779797 Common - hypothetical protein PSEEN0532 30 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 104781331 Common cspD cold-shock protein CspD PSEEN2205 180 COG1278 CspC, Cold shock proteins Transcription 104781822 Common - hypothetical protein PSEEN2737 25 None None None 104784272 Common - glycosyl transferase, family 2 PSEEN5370 154 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104782500 Common algL poly(beta-D-mannuronate) lyase PSEEN3462 3 None None None 104779377 Common - protoheme IX farnesyltransferase PSEEN0064 165 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 104781703 Common hutH-2 histidine ammonia-lyase PSEEN2604 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 104782100 Common ribB/A-2 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein PSEEN3037 225 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 104781726 Common - hypothetical protein PSEEN2634 2 None None None 104783556 Pathogen - hypothetical protein PSEEN4593 1 None None None 104782066 Common aspC aspartate aminotransferase PSEEN3003 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104782754 Common mqo-4 malate:quinone oxidoreductase PSEEN3748 55 COG0579 COG0579, Predicted dehydrogenase General function prediction only 104784182 Common - hypothetical protein PSEEN5274 70 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104782741 Common - lytic murein transglycosylase, soluble PSEEN3733 166 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 104783153 Common - prophage LambdaSo, minor tail protein M PSEEN4178 12 COG4718 COG4718, Phage-related protein Function unknown 104783792 Common dipZ thiol:disulfide interchange protein precursor PSEEN4854 72 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 104781597 Common - hypothetical protein PSEEN2488 6 None None None 104779646 Common - hypothetical protein PSEEN0367 32 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 104780933 Common - integrase PSEEN1782 56 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 104781080 Common - hypothetical protein PSEEN1937 26 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 104779556 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN0274 124 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104779751 Common rpsG 30S ribosomal protein S7 PSEEN0485 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 104784397 Common - sensory box protein PSEEN5503 186 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104784311 Common - hypothetical protein PSEEN5412 72 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 104781157 Common - carbamoyltransferase, NodU family PSEEN2018 53 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 104780417 Common - outer membrane protein, OmpA/MotB family PSEEN1209 29 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104782877 Common aruG arginine succinyltransferase PSEEN3880 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 104783682 Common acs-2 acetyl-CoA synthetase PSEEN4738 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 104779820 Common - hypothetical protein PSEEN0559 2 None None None 104782695 Common - hypothetical protein PSEEN3682 174 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104783709 Common hasR heme acquisition TonB-dependent receptor protein HasR PSEEN4766 74 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104783520 Common - multidrug efflux MFS transporter PSEEN4554 164 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783943 Common tktA transketolase PSEEN5024 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 104784144 Common thyA thymidylate synthase (TS) (TSase) PSEEN5234 135 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 104783986 Common phaC2 poly(3-hydroxyalkanoate) polymerase 2 PSEEN5068 73 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 104780695 Common - methyl-accepting chemotaxis transducer PSEEN1517 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780872 Common - hypothetical protein PSEEN1715 55 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 104779348 Common - transcriptional regulator, LysR family PSEEN0035 156 COG0583 LysR, Transcriptional regulator Transcription 104781483 Common - tyrosine decarboxylase PSEEN2370 87 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 104779834 Common - dTDP-4-rhamnose reductase-related protein PSEEN0574 146 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 104780525 Pathogen - hypothetical protein PSEEN1331 1 None None None 104783119 Common - phage protein PSEEN4144 6 None None None 104781185 Common - outer membrane, autotransporter barrel domain protein PSEEN2047 21 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783751 Common lnt apolipoprotein N-acyltransferase PSEEN4810 163 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 104781977 Common - hypothetical protein PSEEN2906 5 None None None 104784189 Common cysW sulfate/thiosulfate import ABC transporter, membrane protein PSEEN5282 227 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 104781392 Common - hypothetical protein PSEEN2272 6 None None None 104779433 Common - hypothetical protein PSEEN0138 37 COG3672 COG3672, Predicted periplasmic protein Function unknown 104782462 Common - alkanesulfonate monooxygenase PSEEN3421 70 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104779891 Common aldB NAD+ dependent aldehyde dehydrogenase PSEEN0634 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104780023 Common glmM phosphoglucosamine mutase PSEEN0789 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 104780616 Common - hydrolase, haloacid dehalogenase-like family PSEEN1433 77 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 104783672 Common dskA RNA polymerase-binding protein DksA PSEEN4726 119 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 104781512 Common - transcriptional regulator, LysR family PSEEN2399 192 COG0583 LysR, Transcriptional regulator Transcription 104783884 Common motB flagellar motor protein MotB PSEEN4957 87 COG1360 MotB, Flagellar motor protein Cell motility and secretion 104784006 Common mdoG glucan biosynthesis protein G PSEEN5090 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 104783696 Common - chorismate lyase PSEEN4753 36 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 104782566 Common - putative monovalent cation/H+ antiporter subunit G PSEEN3538 48 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 104780702 Common - isochorismatase PSEEN1524 106 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104779336 Common sun Ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase) PSEEN0023 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 104781248 Common - hypothetical protein PSEEN2113 68 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104784338 Common - amino acid transporter PSEEN5442 63 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104784389 Common - acetyltransferase, GNAT family PSEEN5494 79 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 104780978 Common - formate dehydrogenase, delta subunit PSEEN1829 23 None None None 104783530 Common - transcriptional regulator, AraC family PSEEN4564 149 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783573 Common - hypothetical protein PSEEN4614 1 None None None 104781810 Common - acetyltransferase, GNAT family PSEEN2723 47 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 104781356 Common - hypothetical protein PSEEN2231 17 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 104780915 Common - xanthine dehydrogenase accessory factor XdhC PSEEN1763 76 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 104782421 Common - hypothetical protein PSEEN3377 80 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 104781299 Common - hypothetical protein PSEEN2168 9 None None None 104784015 Common hutC histidine utilization repressor PSEEN5099 126 COG2188 PhnF, Transcriptional regulators Transcription 104779693 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase PSEEN0420 118 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 104779464 Common - hypothetical protein PSEEN0171 191 COG0517 COG0517, FOG: CBS domain General function prediction only 104781837 Common - short chain dehydrogenase PSEEN2755 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 104781410 Common - cytochrome c PSEEN2292 61 COG2863 COG2863, Cytochrome c553 Energy production and conversion 104782586 Common dnaQ DNA polymerase III subunit epsilon PSEEN3558 185 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 104780848 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase PSEEN1690 196 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 104782254 Common - transcriptional regulator, TetR family PSEEN3199 24 COG1309 AcrR, Transcriptional regulator Transcription 104782021 Common - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) PSEEN2954 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104783217 Common - transcriptional regulator, TetR family PSEEN4243 91 COG1309 AcrR, Transcriptional regulator Transcription 104783901 Common - transporter, NCS1 nucleoside transporter family PSEEN4976 34 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 104783595 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN4636 40 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 104781920 Common - hypothetical protein PSEEN2845 8 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 104781139 Pathogen - hypothetical protein PSEEN2000 1 None None None 104784297 Common - isochorismatase PSEEN5397 60 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104781510 Common - hypothetical protein PSEEN2397 15 None None None 104779613 Common aroK shikimate kinase PSEEN0334 200 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 104780423 Common - hypothetical protein PSEEN1215 1 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 104783918 Common - hypothetical protein PSEEN4994 5 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 104781101 Common - inosine-uridine preferring nucleoside hydrolase PSEEN1958 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 104784054 Common rfaG glucosyltransferase I PSEEN5141 82 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104782465 Common - hypothetical protein PSEEN3424 9 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104782667 Common - hypothetical protein PSEEN3647 15 None None None 104782232 Common - ABC transporte, ATP binding protein PSEEN3176 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 104783414 Common - hypothetical protein PSEEN4445 1 None None None 104780534 Common phoP transcriptional regulatory protein PhoP PSEEN1345 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104782003 Common - hypothetical protein PSEEN2936 4 None None None 104780216 Common - phosphonate ABC transporter, permease protein PSEEN0995 76 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 104780893 Common gdhB NAD-specific glutamate dehydrogenase; arginine inducible PSEEN1740 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 104781302 Common - isoquinoline 1-oxidoreductase, beta subunit PSEEN2171 111 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 104783034 Common - ketoglutarate semialdehyde dehydrogenase PSEEN4052 184 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104780435 Common - hypothetical protein PSEEN1228 1 COG5608 COG5608, Conserved secreted protein Function unknown 104780862 Common - cytochrome b(561) PSEEN1705 58 COG3038 CybB, Cytochrome B561 Energy production and conversion 104783732 Common - hypothetical protein PSEEN4790 4 COG3416 COG3416, Uncharacterized protein conserved in bacteria Function unknown 104784132 Common - hypothetical protein PSEEN5222 8 None None None 104781173 Common - hypothetical protein PSEEN2034 23 None None None 104783892 Common parC DNA topoisomerase IV subunit A PSEEN4966 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 104781655 Common - hypothetical protein PSEEN2551 40 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 104780257 Common - glycine betaine/carnitine/choline ABC transporter, ATP-binding protein PSEEN1040 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 104780887 Common - hypothetical protein PSEEN1732 6 None None None 104780481 Common - outer membrane protein, OmpA family PSEEN1276 123 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104781873 Common paaG ring-hydroxylation complex protein 1 PSEEN2798 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 104782121 Common - hypothetical protein PSEEN3059 215 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 104782705 Common - hypothetical protein PSEEN3694 22 None None None 104780373 Common catJ 3-oxoadipate:succinyl-CoA transferase, subunit B PSEEN1164 104 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 104782263 Common mvaV transcriptional regulator MvaT, P16 subunit PSEEN3211 4 None None None 104780955 Common ccoQ-1 cytochrome c oxidase, cbb3-type, CcoQ subunit PSEEN1805 5 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 104784249 Common - hypothetical protein PSEEN5347 1 None None None 104780590 Common - major facilitator family transporter PSEEN1406 42 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 104782177 Common - magnesium transporter, MgtC family PSEEN3117 110 COG1285 SapB, Uncharacterized membrane protein Function unknown 104783195 Common rpsB 30S ribosomal protein S2 PSEEN4220 229 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 104782336 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN3288 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783072 Common ruvB Holliday junction DNA helicase B PSEEN4092 213 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 104784160 Common - periplasmic binding protein from ABC-type transporter PSEEN5250 72 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104779697 Common - serine protein kinase PSEEN0424 69 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 104784199 Common potG puttaive putrescine ABC transporter, ATP-binding protein PSEEN5293 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104780990 Common - hypothetical protein PSEEN1843 41 COG4125 COG4125, Predicted membrane protein Function unknown 104783528 Common - D-isomer specific 2-hydroxyacid dehydrogenase PSEEN4562 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 104783113 Common - Mu-like phage protein gp46 PSEEN4138 18 COG4381 COG4381, Mu-like prophage protein gp46 Function unknown 104784366 Common pstB phosphate ABC transporter, ATP-binding protein PSEEN5470 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 104781584 Common - 3-dehydroquinate synthase PSEEN2474 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 104780998 Common aer-1 aerotaxis receptor Aer-1 PSEEN1851 134 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782389 Common - transcriptional regulator, LysR family PSEEN3344 130 COG0583 LysR, Transcriptional regulator Transcription 104780832 Common - hypothetical protein PSEEN1674 43 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 104781471 Common mqo-3 malate:quinone oxidoreductase PSEEN2357 56 COG0579 COG0579, Predicted dehydrogenase General function prediction only 104782094 Common - sensor histidine kinase PSEEN3031 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781982 Common - transporter, LysE family PSEEN2911 119 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104780944 Common hemN coproporphyrinogen III oxidase PSEEN1793 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 104780812 Common leuD isopropylmalate isomerase small subunit PSEEN1651 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 104781672 Common - DNA-3-methyladenine glycosylase II PSEEN2569 136 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 104781440 Pathogen - hypothetical protein PSEEN2325 3 None None None 104783351 Common nagA N-acetylglucosamine-6-phosphate deacetylase PSEEN4380 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 104780223 Common secF preprotein translocase subunit SecF PSEEN1003 206 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 104780387 Common - membrane carboxypeptidase (penicillin-binding protein) PSEEN1178 15 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 104782880 Common argR transcriptional regulator ArgR, AraC family PSEEN3883 148 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104779575 Common - transcriptional regulator, TetR family PSEEN0294 46 COG1309 AcrR, Transcriptional regulator Transcription 104781026 Common - hypothetical protein PSEEN1881 25 COG2259 COG2259, Predicted membrane protein Function unknown 104783977 Common - Holliday junction resolvase-like protein PSEEN5059 175 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 104779595 Common metX homoserine O-acetyltransferase PSEEN0315 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 104784168 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN5258 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104782095 Common - DNA-binding response regulator, OmpR family PSEEN3032 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104780473 Common - hypothetical protein PSEEN1268 90 COG1801 COG1801, Uncharacterized conserved protein Function unknown 104781446 Common - type II secretion system protein M (XcpZ-2); signal peptide PSEEN2331 6 COG3149 PulM, Type II secretory pathway, component PulM Intracellular trafficking and secretion 104783410 Common - hypothetical protein PSEEN4441 108 COG0795 COG0795, Predicted permeases General function prediction only 104779342 Common qor quinone oxidoreductase, NADPH-dependent PSEEN0029 187 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104781439 Common - hypothetical protein PSEEN2324 1 None None None 104784096 Common - hypothetical protein PSEEN5184 30 COG0824 FcbC, Predicted thioesterase General function prediction only 104780823 Common - hypothetical protein PSEEN1664 137 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 104781525 Common - hypothetical protein PSEEN2413 26 COG4544 COG4544, Uncharacterized conserved protein Function unknown 104780819 Common - hydantoin racemase PSEEN1659 43 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 104781508 Common - gamma-aminobutyrate permease GabP-like PSEEN2395 162 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104782048 Common - hypothetical protein PSEEN2981 45 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104784442 Common spoOJ Chromosomal partitioning protein ParB PSEEN5551 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 104780006 Common - hypothetical protein PSEEN0771 102 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 104781106 Common thrS threonyl-tRNA synthetase PSEEN1963 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104783832 Common - heat-shock protein, Hsp70 family PSEEN4897 233 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 104780794 Common - molybdenum cofactor biosynthesis protein A PSEEN1630 199 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 104780174 Common hmp nitric oxide dioxygenase PSEEN0952 123 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 104781501 Common - porin, OprD family PSEEN2388 7 None None None 104780496 Common hepA ATP-dependent helicase HepA PSEEN1293 119 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 104781638 Common - hypothetical protein PSEEN2533 1 None None None 104780344 Pathogen - hypothetical protein PSEEN1132 1 None None None 104783683 Common - hypothetical protein PSEEN4739 27 COG3662 COG3662, Uncharacterized protein conserved in bacteria Function unknown 104781022 Common - hypothetical protein PSEEN1877 5 COG3728 XtmA, Phage terminase, small subunit DNA replication, recombination, and repair 104781147 Common - L-serine dehydratase PSEEN2008 169 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 104781137 Common - membrane protease, Abi family PSEEN1998 11 None None None 104784190 Common cysT sulfate/thiosulfate import ABC transporter, membrane protein PSEEN5283 236 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 104783625 Common - zinc-binding protein PSEEN4670 62 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 104783632 Common clpB ATP-dependent Clp protease, ATP-binding subunit ClpB PSEEN4678 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 104783785 Common speA arginine decarboxylase PSEEN4847 70 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 104779784 Common uvrA excinuclease ABC subunit A PSEEN0519 244 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 104781436 Pathogen - hypothetical protein PSEEN2321 3 None None None 104780195 Pathogen - hypothetical protein PSEEN0974 1 None None None 104781930 Common - hypothetical protein PSEEN2855 1 None None None 104781826 Common - Serine-pyruvate transaminase PSEEN2741 124 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 104779501 Common - outer membrane porin OprE PSEEN0214 9 None None None 104782606 Common - carbon-nitrogen hydrolase PSEEN3582 206 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104783039 Common - hypothetical protein PSEEN4057 6 None None None 104780161 Common - hypothetical protein PSEEN0939 1 None None None 104780181 Common cyoE protoheme IX farnesyltransferase PSEEN0960 169 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 104783436 Common - multidrug efflux MFS transporter PSEEN4467 137 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104784131 Common - hypothetical protein PSEEN5221 7 None None None 104784179 Common - transposase, IS4 family PSEEN5270 21 None None None 104784066 Common - hypothetical protein PSEEN5153 33 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 104780510 Common - sensory box-containing diguanylate cyclase PSEEN1307 181 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104780406 Common glpF glycerol uptake facilitator protein PSEEN1198 135 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 104784106 Common hisH imidazole glycerol phosphate synthase subunit HisH PSEEN5194 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 104782774 Common - hypothetical protein PSEEN3769 28 COG3171 COG3171, Uncharacterized protein conserved in bacteria Function unknown 104783382 Common - glucose ABC transporter, periplasmic sugar-binding protein PSEEN4412 62 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 104781815 Common - hypothetical protein PSEEN2729 3 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 104783344 Common - methyltransferase PSEEN4373 57 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 104781739 Common - oxidoreductase, PNDR family (class II) PSEEN2648 67 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 104779605 Common rpmE 50S ribosomal protein L31 PSEEN0325 204 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 104781118 Pathogen - DNA/RNA helicases, SNF2 family PSEEN1978 1 None None None 104779950 Common - hypothetical protein PSEEN0707 1 None None None 104784369 Common pstS phosphate ABC transporter, periplasmic phosphate-binding protein PSEEN5473 121 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 104779918 Common - acetyl-CoA acetyltransferase PSEEN0664 171 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104782906 Common - sensor histidine kinase PSEEN3910 204 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780243 Common - hypothetical protein PSEEN1024 114 COG1520 COG1520, FOG: WD40-like repeat Function unknown 104781215 Common - hypothetical protein PSEEN2080 4 COG5566 COG5566, Uncharacterized conserved protein Function unknown 104782342 Common - hypothetical protein PSEEN3294 48 COG1944 COG1944, Uncharacterized conserved protein Function unknown 104782875 Common aruB succinylarginine dihydrolase PSEEN3878 34 COG3724 AstB, Succinylarginine dihydrolase Amino acid transport and metabolism 104780323 Common hisD histidinol dehydrogenase PSEEN1107 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 104783559 Common - hypothetical protein PSEEN4596 72 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104784433 Common atpC F0F1 ATP synthase subunit epsilon PSEEN5541 163 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 104779866 Pathogen - hypothetical protein PSEEN0607 1 None None None 104780300 Common - hypothetical protein PSEEN1084 2 None None None 104781555 Common - glycosyl transferase PSEEN2445 119 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 104779941 Common - transcriptional regulator, LysR family PSEEN0698 109 COG0583 LysR, Transcriptional regulator Transcription 104782634 Common - hypothetical protein PSEEN3611 91 COG0628 PerM, Predicted permease General function prediction only 104783790 Common - diguanylate cyclase (GGDEF domain)/response regulator PSEEN4852 218 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104782219 Common - transporter, LysE family PSEEN3162 109 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104783697 Common - transcriptional regulator, ArsR family PSEEN4754 34 COG0640 ArsR, Predicted transcriptional regulators Transcription 104780313 Common - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC PSEEN1097 105 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 104781843 Common - Ku protein PSEEN2761 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 104782793 Common - hypothetical protein PSEEN3788 14 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104780899 Common - hypothetical protein PSEEN1747 1 None None None 104781459 Common - hypothetical protein PSEEN2344 11 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 104779371 Common - cytochrome C oxidase assembly protein PSEEN0058 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 104783434 Common - methylated DNA-protein cysteine methyltransferase PSEEN4465 20 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 104784351 Common recG ATP-dependent DNA helicase PSEEN5455 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 104781576 Common - phospho-sugar nucleotidyltransferase PSEEN2466 220 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 104780637 Common - hypothetical protein PSEEN1454 52 COG3162 COG3162, Predicted membrane protein Function unknown 104781766 Common - hypothetical protein PSEEN2678 74 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783712 Common - hypothetical protein PSEEN4769 5 None None None 104779549 Common - ABC transporter, ATP-binding protein PSEEN0267 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104783262 Common era GTP-binding protein Era PSEEN4289 241 COG1159 Era, GTPase General function prediction only 104782428 Common - acyl-CoA synthetase PSEEN3384 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104780723 Common - hypothetical protein PSEEN1549 1 None None None 104780568 Common - cobyrinic acid a,c-diamide synthase PSEEN1379 137 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 104783288 Common - diguanylate cyclase (GGDEF domain) PSEEN4315 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104780232 Common hscB co-chaperone HscB PSEEN1013 55 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 104782555 Common - lipoprotein PSEEN3527 2 None None None 104781208 Common prtR transmembrane regulator PrtR PSEEN2072 24 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 104782312 Common - hypothetical protein PSEEN3262 13 None None None 104779704 Common - organic solvent tolerance protein precursor OstA PSEEN0431 125 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 104781897 Common - hypothetical protein PSEEN2822 18 None None None 104783102 Common - hypothetical protein PSEEN4126 102 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 104779770 Common rplF 50S ribosomal protein L6 PSEEN0505 239 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 104783550 Pathogen - hypothetical protein PSEEN4584 1 None None None 104783385 Common gltR two-component response regulator GltR PSEEN4415 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104779983 Common - acetyltransferase, GNAT family PSEEN0743 30 COG0456 RimI, Acetyltransferases General function prediction only 104782826 Common - flagellar protein, FliT PSEEN3822 1 None None None 104781128 Common mltD mannitol dehydrogenase PSEEN1989 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 104782490 Common - transcriptional regulator, Cro/CI family PSEEN3451 4 COG1396 HipB, Predicted transcriptional regulators Transcription 104782200 Common benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase PSEEN3140 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779402 Common - hypothetical protein PSEEN0091 6 None None None 104783275 Common - sensor histidine kinase TctE PSEEN4302 215 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104779862 Common - exodeoxyribonuclease VII small subunit PSEEN0602 9 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 104780713 Pathogen - hypothetical protein PSEEN1538 1 None None None 104780270 Common dppD dipeptide ABC transporter, ATP-binding protein PSEEN1054 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 104780549 Common - DNA-binding response regulator PSEEN1360 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104780533 Common oprH outer membrane protein H1 PSEEN1343 3 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 104781447 Common - type II secretion system protein XcpQ-2; signal peptide PSEEN2332 141 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 104779540 Common - carbamoyl-phosphate synthase L chain, ATP-binding PSEEN0256 20 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 104779672 Common pqqE pyrroloquinoline quinone biosynthesis protein PqqE PSEEN0394 157 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 104783234 Common ffh 4.5S-RNP protein, GTP binding export factor, part of signal recognition particle with 4.5 RNA PSEEN4261 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 104780572 Common - cobyric acid synthase PSEEN1383 153 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 104781773 Common - cation transporter, CorA family PSEEN2685 49 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 104779800 Common - hypothetical protein PSEEN0535 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 104781042 Common - para-aminodeoxychorismate synthase subunit I PabB PSEEN1897 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 104781079 Common - 5'-nucleotidase PSEEN1936 31 None None None 104783509 Common algI alginate O-acetylation protein AlgI PSEEN4543 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 104779415 Common - hypothetical protein PSEEN0107 8 None None None 104783862 Common - RNA methyltransferase, TrmH family, group 3 PSEEN4932 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 104780143 Common - glycosyl transferase, group 1 PSEEN0921 175 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104782528 Common nuoI NADH dehydrogenase subunit I PSEEN3491 191 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 104783651 Common - paraquat-inducible protein A PSEEN4697 55 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 104782513 Common - 4-aminobutyrate aminotransferase, PLP-dependent PSEEN3475 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 104782670 Common - transcriptional regulator, GntR family PSEEN3650 222 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104782147 Common - hypothetical protein PSEEN3086 9 None None None 104781207 Common prtI ECF sigma factor PrtI PSEEN2071 85 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104779889 Common eutB ethanolamine ammonia-lyase, heavy chain PSEEN0632 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 104779486 Common metI D-methionine ABC transporter, permease protein PSEEN0198 182 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 104784123 Common mdtI multidrug efflux system protein MdtI PSEEN5212 107 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 104783408 Common tapB cold shock protein PSEEN4439 178 COG1278 CspC, Cold shock proteins Transcription 104780909 Common - methylase PSEEN1757 162 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 104782452 Common - transcriptional regulator, AraC family PSEEN3410 133 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 104783163 Common fdxA ferredoxin PSEEN4188 135 COG1146 COG1146, Ferredoxin Energy production and conversion 104784331 Common algC phosphomannomutase PSEEN5434 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 104781629 Common - hypothetical protein PSEEN2523 117 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 104780235 Common - hypothetical protein PSEEN1016 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 104780342 Common - hypothetical protein PSEEN1130 1 None None None 104779665 Common ntrC two-component response regulator NtrC PSEEN0386 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104784222 Common - hypothetical protein PSEEN5317 9 None None None 104784252 Common - hemY protein PSEEN5350 51 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 104784273 Common - hypothetical protein PSEEN5371 7 COG2246 COG2246, Predicted membrane protein Function unknown 104781238 Common - transcriptional regulator, LysR family PSEEN2103 191 COG0583 LysR, Transcriptional regulator Transcription 104782393 Common iscS-2 cysteine desulfurase PSEEN3349 237 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 104783731 Common - hypothetical protein PSEEN4789 57 COG1432 COG1432, Uncharacterized conserved protein Function unknown 104783546 Pathogen - hypothetical protein PSEEN4580 1 None None None 104783177 Common pyrG CTP synthetase PSEEN4202 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 104780519 Common - transcriptional regulator, GntR family PSEEN1325 176 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104781162 Common - cobalt-zinc-cadmium resistance protein CzcB PSEEN2023 145 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104784215 Common - iron ABC transporter, permease protein PSEEN5310 151 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 104782030 Common wecB UDP-N-acetyl glucosamine-2-epimerase PSEEN2963 156 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 104781859 Pathogen - hypothetical protein PSEEN2780 1 None None None 104783211 Common plsB glycerol-3-phosphate acyltransferase PSEEN4236 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 104782607 Common - hypothetical protein PSEEN3583 46 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104779939 Common - hypothetical protein PSEEN0696 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104781267 Common - acetyltransferase, GNAT family PSEEN2134 35 COG0456 RimI, Acetyltransferases General function prediction only 104781970 Common - glutamine synthetase PSEEN2899 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104780761 Common - hypothetical protein PSEEN1591 2 COG2203 FhlA, FOG: GAF domain Signal transduction mechanisms 104782207 Pathogen - hypothetical protein PSEEN3148 1 None None None 104781497 Common - hypothetical protein PSEEN2384 30 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 104783869 Common hflC HflC protein PSEEN4940 183 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104784342 Common rpoZ DNA-directed RNA polymerase subunit omega PSEEN5446 116 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 104783132 Pathogen - phage protein PSEEN4157 1 None None None 104781532 Common - gluconate permease (GntP family) PSEEN2420 76 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 104780168 Common - chemotaxis sensory transducer PSEEN0946 162 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780152 Common - deoxyribonuclease, TatD family (metal-dependent) PSEEN0930 229 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 104783042 Pathogen - hypothetical protein PSEEN4060 1 None None None 104780039 Common glyA serine hydroxymethyltransferase PSEEN0806 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 104783155 Common - phage protein PSEEN4180 2 None None None 104781778 Common - hypothetical protein PSEEN2690 9 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104784257 Common argH argininosuccinate lyase PSEEN5355 233 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 104783582 Common - short chain dehydrogenase PSEEN4623 175 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781933 Common - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) PSEEN2858 177 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104783921 Common - hypothetical protein PSEEN4997 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 104783758 Common - membrane-bound lytic murein transglycosylase PSEEN4817 104 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 104784379 Common - lipase PSEEN5483 18 COG3675 COG3675, Predicted lipase Lipid metabolism 104781346 Common - hypothetical protein PSEEN2221 19 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 104779661 Common grxC glutaredoxin PSEEN0382 127 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 104780776 Common rluC 23S rRNA pseudouridylate synthase PSEEN1609 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 104782220 Common - transcriptional regulator, AraC family PSEEN3163 122 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104780208 Common - hypothetical protein PSEEN0987 1 None None None 104781640 Common - hypothetical protein PSEEN2536 2 None None None 104779935 Common recC exonuclease V, gamma subunit PSEEN0691 66 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 104783098 Common - DNA-binding response regulator, LuxR family PSEEN4122 198 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104782592 Common - ABC transporter, periplamic binding protein PSEEN3565 182 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 104779388 Common - hypothetical protein PSEEN0075 12 None None None 104783659 Common - hypothetical protein PSEEN4713 31 COG3098 COG3098, Uncharacterized protein conserved in bacteria Function unknown 104781074 Common - 4-oxalocrotonate tautomerase PSEEN1931 39 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 104781375 Common - hydrolase, isochorismatase family PSEEN2254 97 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104779738 Common - biotin--protein ligase PSEEN0471 215 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 104782193 Common - membrane bound hydrolase PSEEN3133 23 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 104781699 Common - transcriptional regulator, LysR family PSEEN2599 182 COG0583 LysR, Transcriptional regulator Transcription 104784412 Common - cyclopropane-fatty-acyl-phospholipid synthase PSEEN5518 153 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 104779341 Common - hypothetical protein PSEEN0028 1 None None None 104782664 Common sdhD succinate dehydrogenase, hydrophobic membrane anchor protein PSEEN3643 52 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 104782495 Common - alginate specific ion channel AlgE-like PSEEN3457 2 None None None 104782166 Common C2-hpah P-hydroxyphenylacetate hydroxylase C2:oxygenase component PSEEN3105 64 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104784081 Common - oxidoreductase, FAD-binding PSEEN5168 159 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 104783519 Common - multidrug efflux MFS membrane fusion protein PSEEN4553 165 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104782939 Common - filamentous hemagglutinin PSEEN3946 75 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 104784207 Common - adenylate cyclase PSEEN5302 30 COG3025 COG3025, Uncharacterized conserved protein Function unknown 104779756 Common rplD 50S ribosomal protein L4 PSEEN0491 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 104781470 Common - hypothetical protein PSEEN2356 55 COG4277 COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif General function prediction only 104781680 Common - hypothetical protein PSEEN2578 39 COG3411 COG3411, Ferredoxin Energy production and conversion 104782079 Common - hypothetical protein PSEEN3016 28 COG4312 COG4312, Uncharacterized protein conserved in bacteria Function unknown 104779964 Common - hypothetical protein PSEEN0721 44 COG2510 COG2510, Predicted membrane protein Function unknown 104780664 Common - phosphoglycolate phosphatase PSEEN1483 200 COG0546 Gph, Predicted phosphatases General function prediction only 104782832 Common - glycosyltransferase PSEEN3828 37 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 104784212 Common gcvP-1 glycine dehydrogenase PSEEN5307 173 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 104782502 Common - acetyltransferase, GNAT family PSEEN3464 18 COG0456 RimI, Acetyltransferases General function prediction only 104780034 Common - Xanthine/uracil permease PSEEN0801 124 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 104783225 Common hom homoserine dehydrogenase PSEEN4252 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 104783590 Common - periplasmic polyamine-binding protein PSEEN4631 129 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104784071 Common soxG sarcosine oxidase, gamma subunit PSEEN5158 29 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 104779699 Common apaH diadenosine tetraphosphatase PSEEN0426 86 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 104783867 Common purA adenylosuccinate synthetase PSEEN4938 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 104783465 Common - hypothetical protein PSEEN4497 149 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 104782580 Common - transcriptional regulator, LysR family PSEEN3552 192 COG0583 LysR, Transcriptional regulator Transcription 104780670 Common pheA bifunctional chorismate mutase/prephenate dehydratase PheA PSEEN1489 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 104780653 Common - hypothetical protein PSEEN1471 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 104780139 Common pta phosphate acetyltransferase PSEEN0916 171 COG0280 Pta, Phosphotransacetylase Energy production and conversion 104780431 Common - hypothetical protein PSEEN1224 1 None None None 104780041 Common - hypothetical protein PSEEN0809 1 None None None 104780040 Common - sensory box protein(GGDEF domain/EAL domain) PSEEN0807 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104782244 Common - hypothetical protein PSEEN3189 70 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 104779352 Common trpI transcriptional regulator TrpI PSEEN0039 161 COG0583 LysR, Transcriptional regulator Transcription 104781063 Common - acetyl-CoA synthetase PSEEN1919 218 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 104782837 Common flgJ peptidoglycan hydrolase PSEEN3833 72 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 104781491 Common - hypothetical protein PSEEN2378 1 None None None 104780450 Common - hypothetical protein PSEEN1243 38 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 104783187 Common - outer membrane protein, bacterial surface antigen family PSEEN4212 160 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 104781477 Common - prolipoprotein signal peptidase (Signal peptidase II.) PSEEN2363 109 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783945 Common metK S-adenosylmethionine synthetase PSEEN5026 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 104782589 Common - hydroxyacylglutathione hydrolase GloB PSEEN3561 174 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 104782843 Common flgE flagellar hook protein FlgE PSEEN3839 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 104781732 Common - hypothetical protein PSEEN2640 1 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 104779832 Common - transcriptional regulator, Cro/CI family PSEEN0572 11 None None None 104779627 Common - 3-oxoacyl-(acyl carrier protein) synthase I PSEEN0348 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104782183 Common oprJ Outer membrane protein oprJ precursor PSEEN3123 120 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104780548 Common gacS GacS sensor kinase protein PSEEN1359 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781232 Common ureE urease accessory protein UreE PSEEN2097 60 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 104779724 Common vfr cAMP-regulatory protein PSEEN0451 150 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 104781992 Common - hypothetical protein PSEEN2922 5 None None None 104781712 Common adhC-1 glutathione-dependent formaldehyde dehydrogenase (alcohol dehydrogenase class III) PSEEN2613 208 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 104780457 Common - response regulator/GGDEF domain protein PSEEN1251 214 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104781072 Common - N-acetyl-gamma-glutamyl-phosphate reductase PSEEN1929 213 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 104780526 Common - hypothetical protein PSEEN1333 3 COG3617 COG3617, Prophage antirepressor Transcription 104782487 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PSEEN3448 192 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 104780403 Common glpD glycerol-3-phosphate dehydrogenase PSEEN1195 148 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 104779806 Pathogen - hypothetical protein PSEEN0542 2 None None None 104781482 Common - transcriptional regulator, LysR family PSEEN2369 147 COG0583 LysR, Transcriptional regulator Transcription 104784261 Common cyaA adenylate cyclase PSEEN5359 25 COG3072 CyaA, Adenylate cyclase Nucleotide transport and metabolism 104781968 Common - bifunctional: transcriptional regulator (MocR family) (N-terminal); amino transferase (C-terminal) PSEEN2897 158 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104780016 Common carB carbamoyl phosphate synthase large subunit PSEEN0782 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 104779720 Common trpG anthranilate synthase component II PSEEN0447 236 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 104780084 Common rplY 50S ribosomal protein L25/general stress protein Ctc PSEEN0856 194 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 104781998 Common - transcriptional regulator, LysR family PSEEN2930 125 COG0583 LysR, Transcriptional regulator Transcription 104783619 Common - hypothetical protein PSEEN4664 3 COG2019 AdkA, Archaeal adenylate kinase Nucleotide transport and metabolism 104784280 Common - molybdenum-pterin binding protein PSEEN5378 75 COG3585 MopI, Molybdopterin-binding protein Coenzyme metabolism 104779434 Common - signal transduction protein; GGDEF/EAL domain PSEEN0139 165 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 104780190 Pathogen - hypothetical protein PSEEN0969 1 None None None 104783575 Common - hydrolase, alpha/beta fold family PSEEN4616 93 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104780420 Common - response regulator, LuxR family PSEEN1212 223 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104783379 Common - glucose ABC transporter, ATP-binding subunit PSEEN4409 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 104780697 Common - glutathione S-transferase PSEEN1519 104 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104784356 Common rubA rubredoxin PSEEN5460 116 COG1773 COG1773, Rubredoxin Energy production and conversion 104781805 Common - Polyketide Synthase (terminal component) PSEEN2718 236 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783432 Common - hypothetical protein PSEEN4463 32 COG0748 HugZ, Putative heme iron utilization protein Inorganic ion transport and metabolism 104781059 Common - sensor histidine kinase PSEEN1915 163 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780708 Common - oxidase PSEEN1531 28 COG1791 COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 104781565 Common - transcriptional regulator, LysR family PSEEN2455 191 COG0583 LysR, Transcriptional regulator Transcription 104781463 Common - hypothetical protein PSEEN2349 4 None None None 104783040 Common - hypothetical protein PSEEN4058 1 None None None 104783776 Common - hypothetical protein PSEEN4836 1 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 104779799 Common - hypothetical protein PSEEN0534 47 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 104779588 Common thiG thiazole synthase PSEEN0307 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 104784177 Pathogen - hypothetical protein PSEEN5268 1 None None None 104784151 Common - hypothetical protein PSEEN5241 1 COG5528 COG5528, Predicted integral membrane protein Function unknown 104781366 Pathogen - hypothetical protein PSEEN2245 1 None None None 104781608 Common - RNA polymerase sigma-70 factor PSEEN2499 28 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104784043 Common - nucleotidyltransferase, CBS domain/cAMP binding PSEEN5129 112 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 104783611 Pathogen - hypothetical protein PSEEN4655 1 None None None 104782035 Common - sensor histidine kinase PSEEN2968 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782068 Common - hypothetical protein PSEEN3005 22 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104784033 Common bioH biotin biosynthesis BioH PSEEN5119 52 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104784284 Common - hypothetical protein PSEEN5383 6 None None None 104784146 Common - hypothetical protein PSEEN5236 157 COG0730 COG0730, Predicted permeases General function prediction only 104781668 Common - Ribonuclease PSEEN2564 35 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 104779620 Common - transporter, MFS superfamily PSEEN0341 119 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104779810 Common - hypothetical protein PSEEN0546 6 None None None 104779581 Common ftsY cell division protein FtsY PSEEN0300 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 104781397 Common - hypothetical protein PSEEN2278 1 None None None 104783927 Common - drug resistance transporter, EmrB/QacA family PSEEN5007 196 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104782970 Common - hypothetical protein PSEEN3979 55 COG3832 COG3832, Uncharacterized conserved protein Function unknown 104780069 Common - FecR-like transmembrane sensor PSEEN0840 45 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104781049 Common - aconitate hydratase PSEEN1905 223 COG1048 AcnA, Aconitase A Energy production and conversion 104780260 Common - glycine betaine/carnitine/choline ABC transporter, permease protein PSEEN1043 175 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 104783336 Common - transcriptional regulator with cyclic nucleotide-binding domain PSEEN4365 99 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 104781721 Common - hypothetical protein PSEEN2628 87 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 104783328 Common - carboxyphosphonoenolpyruvate phosphonomutase PSEEN4356 113 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 104782492 Common alg8-2 Glycosyl transferase Alg8 PSEEN3454 5 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104781646 Common - PAS domain containing response regulator, LuxR family PSEEN2542 99 COG4566 TtrR, Response regulator Signal transduction mechanisms 104781013 Common clpP ATP-dependent Clp protease proteolytic subunit PSEEN1868 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 104783190 Common cdsA phosphatidate cytidylyltransferase PSEEN4215 213 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 104781282 Common - non-ribosomal peptide synthetase PSEEN2150 215 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104779603 Common argS arginyl-tRNA synthetase PSEEN0323 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104781614 Common pmsA histidine decarboxylase PSEEN2506 78 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 104782151 Common hpaR Homoprotocatechuate degradative operon repressor PSEEN3090 98 COG1846 MarR, Transcriptional regulators Transcription 104780097 Common - hypothetical protein PSEEN0872 1 None None None 104782803 Common flhF flagellar biosynthesis regulator FlhF PSEEN3798 244 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 104779856 Common ribA GTP cyclohydrolase II PSEEN0596 197 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 104780778 Common - peptidase SppA PSEEN1611 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 162139697 Common rph ribonuclease PH PSEEN5439 198 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 104782807 Common fliQ flagellar biosynthesis protein FliQ PSEEN3802 86 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 104781961 Common - universal stress protein PSEEN2890 36 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 104782356 Pathogen - hypothetical protein PSEEN3309 1 None None None 104782539 Common pcoB copper resistance protein B PSEEN3502 42 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 104783856 Common dnaB replicative DNA helicase PSEEN4926 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 104779514 Common envZ Osmolarity sensor protein EnvZ PSEEN0228 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783725 Pathogen - hypothetical protein PSEEN4782 1 COG3435 COG3435, Gentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104780807 Common - tRNA-dihydrouridine synthase C PSEEN1646 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 104784399 Common - hypothetical protein PSEEN5505 31 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 104782948 Common - hypothetical protein PSEEN3955 2 None None None 104781284 Common - Cysteine synthase PSEEN2152 217 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 104779489 Common - monooxygenase PSEEN0201 73 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104780442 Common - oxidireductase PSEEN1235 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104782115 Common ccd Cytosine deaminase PSEEN3052 208 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 104782828 Common fliD flagellar cap protein FliD PSEEN3824 89 COG1345 FliD, Flagellar capping protein Cell motility and secretion 104781454 Common - signal transduction protein, GGDEF domain PSEEN2339 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104784301 Common - oxidoreductase, FAD-binding PSEEN5401 129 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104780132 Common - hypothetical protein PSEEN0909 18 None None None 104780635 Common - beta (1-6) glucans synthase PSEEN1452 15 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 104782728 Common - hypothetical protein PSEEN3719 50 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 104782158 Common hpaH 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (OHED hydratase) PSEEN3097 64 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 104781387 Common - short chain dehydrogenase PSEEN2267 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779520 Common pck phosphoenolpyruvate carboxykinase PSEEN0234 98 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 104783486 Common cysD sulfate adenylyltransferase subunit 2 PSEEN4518 142 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 104779701 Common ksgA dimethyladenosine transferase PSEEN0428 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 104782457 Common - hypothetical protein PSEEN3415 33 COG4185 COG4185, Uncharacterized protein conserved in bacteria Function unknown 104782302 Common - dihydropyrimidine dehydrogenase PSEEN3251 141 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 104780598 Common - hypothetical protein PSEEN1414 5 None None None 104782027 Common ilvA-1 threonine dehydratase PSEEN2960 209 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 104782690 Common - hypothetical protein PSEEN3673 18 COG3575 COG3575, Uncharacterized protein conserved in bacteria Function unknown 104781719 Common mdh malate dehydrogenase PSEEN2621 191 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 104782738 Common - hypothetical protein PSEEN3730 2 None None None 104779635 Common - phenylalanine/histidine ammonia-lyase PSEEN0356 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 104784337 Common gmk guanylate kinase PSEEN5441 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 104782936 Common - transposase, IS3 family (orf 1) PSEEN3943 63 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 104780449 Common - ABC transporter, periplasmic polyamine-binding protein PSEEN1242 123 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104783014 Common - hypothetical protein PSEEN4030 2 COG3975 COG3975, Predicted protease with the C-terminal PDZ domain General function prediction only 104783290 Common rsuA 16S rRNA pseudouridylate 516 synthase PSEEN4317 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 104780353 Common - phospholipase PSEEN1142 145 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 104781468 Common - TonB-dependent siderophore receptor PSEEN2354 119 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104782520 Common - hypothetical protein PSEEN3482 27 COG3714 COG3714, Predicted membrane protein Function unknown 104782947 Common - aminotransferase PSEEN3954 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104783646 Common ileS isoleucyl-tRNA synthetase PSEEN4692 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104783256 Common - lipoprotein UxpA PSEEN4283 32 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 104783395 Common arcD-2 arginine/ornithine antiporter PSEEN4426 120 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104779745 Common rplA 50S ribosomal protein L1 PSEEN0479 245 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 104782915 Common - hypothetical protein PSEEN3919 29 COG3526 COG3526, Uncharacterized protein conserved in bacteria Posttranslational modification, protein turnover, chaperones 104780089 Common - hemolysin co-regulated protein 1A PSEEN0861 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104780398 Common gltL Glutamate-aspartate ABC transporter, ATP-binding protein PSEEN1190 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 104779817 Pathogen - hypothetical protein PSEEN0556 1 None None None 104783026 Common moaA molybdenum cofactor biosynthesis protein A PSEEN4043 199 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 104783962 Common - cytochrome, b561 family PSEEN5044 66 COG3038 CybB, Cytochrome B561 Energy production and conversion 104782498 Common - alginate O-acetyltransferase PSEEN3460 3 None None None 104782850 Common flgA flagellar basal body P-ring biosynthesis protein FlgA PSEEN3846 63 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 104783890 Common - hypothetical protein PSEEN4963 1 COG3726 AhpA, Uncharacterized membrane protein affecting hemolysin expression General function prediction only 104783826 Common - branched-chain amino acid transport ABC transporter, ATP-binding component PSEEN4891 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 104779675 Common pqqB pyrroloquinoline quinone biosynthesis protein PqqB PSEEN0397 35 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 104782956 Common ppiA peptidyl-prolyl cis-trans isomerase A (rotamase A) PSEEN3963 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 104782813 Common fliK flagellar hook-length control protein FliK PSEEN3808 36 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 104780115 Common - hypothetical protein PSEEN0891 1 None None None 104781540 Common - cobalamin biosynthesis protein cobE PSEEN2428 23 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 104782802 Common fleN flagellar number regulator FleN PSEEN3797 160 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104784223 Common - hypothetical protein PSEEN5318 47 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 104780054 Common phnA alkylphosphonate utilization operon protein PhnA PSEEN0823 83 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 104783314 Common - dicarboxylate transport protein (MFS superfamily) PSEEN4342 138 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781549 Common galE UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) PSEEN2439 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 104782891 Common - hypothetical protein PSEEN3895 1 None None None 104783566 Common - leucine dehydrogenase PSEEN4606 147 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 104783299 Common - TonB-dependent ferric siderophore receptor PSEEN4326 86 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 104781728 Common - hypothetical protein PSEEN2636 28 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 104783312 Common - sensor histidine kinase PSEEN4340 221 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104784299 Pathogen - hypothetical protein PSEEN5399 1 None None None 104779601 Common - hypothetical protein PSEEN0321 12 COG2314 XynA, Predicted membrane protein Function unknown 104780943 Common anr transcriptional regulator Anr PSEEN1792 165 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 104780141 Common gpo glutathione peroxidase PSEEN0919 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 104782782 Common ccmF periplasmic cytochrome c-type biogenesis protein CcmF PSEEN3777 122 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 104781903 Common - hypothetical protein PSEEN2828 4 None None None 104782576 Common fadB2x 3-hydroxyacyl-CoA dehydrogenase FadB2x PSEEN3548 222 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781408 Common - hypothetical protein PSEEN2289 4 COG5161 SFT1, Pre-mRNA cleavage and polyadenylation specificity factor RNA processing and modification 104780756 Common - glutathione peroxidase PSEEN1585 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 104781341 Common serS seryl-tRNA synthetase PSEEN2216 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 104784279 Common - hypothetical protein PSEEN5377 53 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 104784012 Common hutH histidine ammonia-lyase PSEEN5096 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 104780286 Common - lipoprotein, RplA family PSEEN1070 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 104783210 Common - cold shock protein CspE-like PSEEN4235 178 COG1278 CspC, Cold shock proteins Transcription 104779537 Common rmlB dTDP-D-glucose-4,6-dehydratase PSEEN0253 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 104781257 Common - electron transporter, SCO1/SenC family protein/cytochrome c PSEEN2123 68 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 104783244 Common - hypothetical protein PSEEN4271 64 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 104782703 Common dusA tRNA-dihydrouridine synthase A PSEEN3691 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 104781078 Common - hypothetical protein PSEEN1935 79 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 104783506 Common algG alginate-C5-mannuronan-epimerase AlgG PSEEN4540 8 COG3420 NosD, Nitrous oxidase accessory protein Inorganic ion transport and metabolism 104784116 Common gabP-2 gamma-aminobutyrate transporter PSEEN5205 161 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104780111 Common - uracil permease PSEEN0887 122 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 104780655 Common fumC fumarate hydratase PSEEN1474 207 COG0114 FumC, Fumarase Energy production and conversion 104779974 Common - acetyltransferase, GNAT family PSEEN0732 110 COG0456 RimI, Acetyltransferases General function prediction only 104780644 Common - sensor protein PSEEN1461 155 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 104780785 Common acpP acyl carrier protein AcpP PSEEN1620 183 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104784098 Common - transcriptional regulator, AraC family PSEEN5186 147 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104782217 Common ppiC-1 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) PSEEN3160 121 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 104784405 Common - cobalamin synthesis protein, P47K family PSEEN5511 125 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 104780176 Common - hypothetical protein PSEEN0955 1 None None None 104783836 Common - hypothetical protein PSEEN4902 65 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 104780847 Common truA tRNA pseudouridine synthase A PSEEN1689 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 104780210 Common - hypothetical protein PSEEN0989 27 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 104782536 Common - protease, U32 family PSEEN3499 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 104784184 Common - hemolysin co-regulated protein 1A PSEEN5276 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104779816 Common - hypothetical protein PSEEN0554 14 None None None 104782564 Common - putative monovalent cation/H+ antiporter subunit E PSEEN3536 47 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 104780186 Common - aminotransferase PSEEN0965 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104783562 Common - hypothetical protein PSEEN4601 19 None None None 104780935 Common - hypothetical protein PSEEN1784 4 None None None 104782900 Common - phosphoesterase (PHP family) PSEEN3904 125 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 104780629 Common minC septum formation inhibitor PSEEN1446 94 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 104782920 Common - hypothetical protein PSEEN3924 53 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 104780416 Common pyrC dihydroorotase PSEEN1208 86 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 104781925 Common - hypothetical protein PSEEN2850 4 None None None 104783600 Pathogen - hypothetical protein PSEEN4642 1 None None None 104782046 Common - hypothetical protein PSEEN2979 33 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104783673 Common - glutamyl-Q tRNA(Asp) synthetase PSEEN4727 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 104783470 Common sspA stringent starvation protein A PSEEN4502 105 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104782477 Common - TonB-dependent siderophore receptor PSEEN3437 98 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 104781875 Common paaI phenylacetic acid degradation, subunit of multicomponent oxygenase PSEEN2800 42 COG3396 COG3396, Uncharacterized conserved protein Function unknown 104782964 Common - oxidoreductase PSEEN3972 114 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104783703 Common - 4-oxalocrotonate tautomerase PSEEN4760 3 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 104781595 Common - insecticidal toxin SepC/TccC PSEEN2485 32 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104783726 Common pcaG protocatechuate 3,4-dioxygenase alpha chain (3,4-PCD) PSEEN4783 37 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 104781755 Common - amino acid ABC transporter, periplasmic binding protein PSEEN2667 168 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104779318 Common dnaN DNA polymerase III subunit beta PSEEN0002 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 104781122 Pathogen - hypothetical protein PSEEN1983 1 None None None 104781258 Common - hypothetical protein PSEEN2124 60 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 104781086 Common - acetyltransferase, GNAT family PSEEN1943 13 COG3153 COG3153, Predicted acetyltransferase General function prediction only 104781701 Common - glycine betaine ABC transporter, permease protein PSEEN2602 217 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 104782744 Common - hypothetical protein PSEEN3737 1 None None None 104779971 Common - transcriptional regulator, GntR family PSEEN0729 132 COG2186 FadR, Transcriptional regulators Transcription 104783301 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN4328 44 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104780855 Common - oxidoreductase PSEEN1697 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781885 Common katB catalase (hydroperoxidase II) PSEEN2810 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 104779790 Common - hypothetical protein PSEEN0525 17 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 104781953 Common - L-aminopeptidase D-Ala-esterase/amidase PSEEN2881 63 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781708 Common - hypothetical protein PSEEN2609 4 None None None 104780508 Common - sensor histidine kinase PSEEN1305 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782765 Common - hypothetical protein PSEEN3760 1 None None None 104783453 Common murG N-acetylglucosaminyl transferase PSEEN4485 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 104781786 Common - hypothetical protein PSEEN2698 13 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104783006 Common - hypothetical protein PSEEN4022 6 None None None 104783477 Common - transcriptional regulator, AraC family PSEEN4509 148 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104782210 Common - ABC transporter, periplasmic binding protein PSEEN3152 131 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 104782416 Common - hypothetical protein PSEEN3372 1 None None None 104782250 Common - hypothetical protein PSEEN3195 81 COG2128 COG2128, Uncharacterized conserved protein Function unknown 104779762 Common rplP 50S ribosomal protein L16 PSEEN0497 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 104780688 Common - hypothetical protein PSEEN1509 2 None None None 104779769 Common rpsH 30S ribosomal protein S8 PSEEN0504 232 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 104782546 Common speB agmatinase PSEEN3509 156 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 104783908 Common - oxidoreductase, aldo/keto reductase family PSEEN4984 190 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 104781991 Common - hypothetical protein PSEEN2921 55 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 104782865 Common - endoribonuclease L-PSP family PSEEN3861 182 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 104780606 Common - hypothetical protein PSEEN1423 1 None None None 104784264 Common - hypothetical protein PSEEN5362 1 COG3313 COG3313, Predicted Fe-S protein General function prediction only 104782157 Common hpaF 5-carboxymethyl-2-hydroxymuconate delta-isomerase (5-carboxymethyl-2-hydroxymuconic acid isomerase) (CHM isomerase) (CHMI) PSEEN3096 28 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 104782759 Common - cell developmental protein SirA PSEEN3754 111 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 104782640 Common - hypothetical protein PSEEN3617 5 None None None 104779558 Common - TonB-dependent receptor PSEEN0276 114 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104779395 Common - diguanylate cyclase (GGDEF domain protein) PSEEN0083 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104782713 Common - copper-binding protein PSEEN3703 27 COG4454 COG4454, Uncharacterized copper-binding protein Inorganic ion transport and metabolism 104782615 Pathogen - hypothetical protein PSEEN3592 1 None None None 104783803 Common - membrane protein, MarC family PSEEN4866 159 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 104783053 Common - hypothetical protein PSEEN4072 19 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 104781781 Pathogen - hypothetical protein PSEEN2693 1 None None None 104784419 Common - Asparagine synthase (glutamine-hydrolyzing) PSEEN5526 166 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 104783749 Common - hypothetical protein PSEEN4808 146 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 104782285 Common - pyoverdine sidechain peptide synthetase PSEEN3234 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104782136 Common - hypothetical protein PSEEN3074 1 None None None 104780681 Common - nucleoside-diphosphate-sugar epimerase WbjC PSEEN1501 88 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104782372 Common - hydrolase, isochorismatase family PSEEN3325 68 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104781314 Common - hypothetical protein PSEEN2185 115 COG0730 COG0730, Predicted permeases General function prediction only 104780748 Common - lipoprotein PSEEN1577 1 None None None 104781657 Pathogen - hypothetical protein PSEEN2553 1 None None None 104783842 Common - transcriptional regulator, TetR family PSEEN4908 41 COG1309 AcrR, Transcriptional regulator Transcription 104782298 Common - transcriptional regulator, LysR family PSEEN3247 168 COG0583 LysR, Transcriptional regulator Transcription 104779691 Common - hypothetical protein PSEEN0418 170 COG0344 COG0344, Predicted membrane protein Function unknown 104782368 Common - hypothetical protein PSEEN3321 2 None None None 104782630 Common kdpC potassium-transporting ATPase subunit C PSEEN3607 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 104779630 Common - oxidoreductase protein PSEEN0351 40 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 104780100 Common prfA peptide chain release factor 1 PSEEN0876 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 104782256 Common - response regulator/sensor histidine kinase (hybrid) PSEEN3202 217 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 104780334 Common sodB superoxide dismutase PSEEN1121 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 104783095 Common fpr-1 ferredoxin--NADP+ reductase PSEEN4119 109 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 104782657 Common sucD succinyl-CoA synthetase subunit alpha PSEEN3635 217 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 104782766 Common - hypothetical protein PSEEN3761 13 None None None 104782689 Common - hypothetical protein PSEEN3672 70 COG3791 COG3791, Uncharacterized conserved protein Function unknown 104779506 Common ssuC sulfonate ABC transporter, permease protein SsuC PSEEN0220 195 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104782261 Common - precorrin 6A synthase PSEEN3208 62 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 104781863 Common - fatty acid desaturase PSEEN2786 23 COG3239 DesA, Fatty acid desaturase Lipid metabolism 104780586 Common - hypothetical protein PSEEN1400 1 None None None 104779495 Common srpH serine O-acetyltransferase PSEEN0208 190 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 104780962 Common pvdZ siderophore biosynthesis protein PSEEN1813 41 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 104781226 Common - hypothetical protein PSEEN2091 9 None None None 104783203 Common csdA cysteine sulfinate desulfinase PSEEN4228 237 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 104782011 Common - hypothetical protein PSEEN2944 19 None None None 104779772 Common rpsE 30S ribosomal protein S5 PSEEN0507 246 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 104783607 Common - hypothetical protein PSEEN4650 56 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 104780627 Common minE cell division topological specificity factor MinE PSEEN1444 87 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 104780769 Common - biopolymer transport protein ExbD/TolR family PSEEN1602 33 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 104783145 Pathogen - phage protein PSEEN4170 1 None None None 104779647 Common - thioredoxin PSEEN0368 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 104780925 Pathogen - hypothetical protein PSEEN1774 1 None None None 104780298 Common - hypothetical protein PSEEN1082 61 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 104782509 Pathogen - hypothetical protein PSEEN3471 1 None None None 104783849 Common - branched-chain amino acid ABC transporter, permease protein PSEEN4916 169 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 104783058 Common - glycosyl transferase MigA PSEEN4078 210 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104783238 Common purT phosphoribosylglycinamide formyltransferase 2 PSEEN4265 206 COG0027 PurT, Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) Nucleotide transport and metabolism 104779687 Common rpoD RNA polymerase sigma factor RpoD PSEEN0413 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 104782289 Common - hypothetical protein PSEEN3238 6 None None None 104782268 Common - hypothetical protein PSEEN3216 1 None None None 104779927 Common add adenosine deaminase PSEEN0674 100 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 104781899 Common - curlin; signal peptide PSEEN2824 29 None None None 104783991 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase PSEEN5073 222 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104780762 Common - hypothetical protein PSEEN1593 3 None None None 104779561 Pathogen - hypothetical protein PSEEN0279 1 None None None 104780638 Common actP acetate permease PSEEN1455 176 COG4147 DhlC, Predicted symporter General function prediction only 104780319 Common ttg2E toluene-tolerance protein TtgE PSEEN1103 1 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 104783134 Common - phage variable tail fibre protein PSEEN4159 34 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 104783400 Common - hypothetical protein PSEEN4431 1 None None None 104784119 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN5208 175 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104779440 Common - taurine catabolic dioxygenase PSEEN0146 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104780587 Common - hypothetical protein PSEEN1403 1 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 104781176 Common - permease, cytosine/purines, uracil, thiamine, allantoin permease family PSEEN2038 60 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 104781058 Common - DNA-binding response regulator PSEEN1914 206 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104780015 Common carA carbamoyl phosphate synthase small subunit PSEEN0781 234 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 104780255 Common - FecR-like transmembrane sensor PSEEN1038 48 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104782583 Common - oxidoreductase, flavoprotein PSEEN3555 104 COG0431 COG0431, Predicted flavoprotein General function prediction only 104782238 Pathogen - hypothetical protein PSEEN3183 1 None None None 104783505 Common algE outer membrane protein AlgE PSEEN4539 3 None None None 104779805 Common - hypothetical protein PSEEN0541 65 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104783341 Common - hypothetical protein PSEEN4370 3 None None None 104783911 Common msbA lipid A export ATP-binding/permease protein msbA PSEEN4987 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104783097 Common dgkA diacylglycerol kinase PSEEN4121 103 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 104782681 Common - RND efflux membrane fusion protein PSEEN3664 171 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104780225 Common suhB inositol-1-monophosphatase (IMPase) (Inositol-1-phosphatase) (I-1-Pase) PSEEN1005 212 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 104782277 Common fpvA TonB-dependent siderophore receptor FpvA PSEEN3225 121 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104781807 Common - dioxygenase, TauD PSEEN2720 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104783475 Common rplM 50S ribosomal protein L13 PSEEN4507 231 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 104779746 Common rplJ 50S ribosomal protein L10 PSEEN0480 210 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 104781677 Common - hypothetical protein PSEEN2574 5 COG2863 COG2863, Cytochrome c553 Energy production and conversion 104780200 Common - hypothetical protein PSEEN0979 2 None None None 104781322 Common - Triacylglycerol lipase PSEEN2195 88 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 104781094 Common aspQ glutaminase-asparaginase PSEEN1951 135 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 104781841 Common - hypothetical protein PSEEN2759 1 None None None 104782669 Common - hypothetical protein PSEEN3649 1 None None None 104780246 Common - hydrolase, carbon-nitrogen hydrolase family PSEEN1027 196 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104781939 Common - transcriptional regulator, LysR family PSEEN2867 151 COG0583 LysR, Transcriptional regulator Transcription 104780821 Common - transcriptional regulator, AsnC family PSEEN1662 55 COG1522 Lrp, Transcriptional regulators Transcription 104782039 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A PSEEN2972 129 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 104781879 Common actP acetate permease PSEEN2804 167 COG4147 DhlC, Predicted symporter General function prediction only 104781954 Common - amino acid permease PSEEN2882 147 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104783539 Common fecA Fe(III) dicitrate transport protein FecA PSEEN4573 101 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 104781076 Common - transcriptional regulator, LysR family PSEEN1933 174 COG0583 LysR, Transcriptional regulator Transcription 104780479 Common - hydrolase PSEEN1274 10 None None None 104781458 Common - hypothetical protein PSEEN2343 8 None None None 104781295 Common - hypothetical protein PSEEN2163 15 None None None 104783496 Common moaD molybdenum cofactor biosynthesis protein D PSEEN4529 53 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 104781550 Common - hypothetical protein PSEEN2440 4 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 104783405 Common gcvP-2 glycine dehydrogenase PSEEN4436 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 104780351 Common - hypothetical protein PSEEN1140 1 None None None 104783384 Common - sensor histidine kinase PSEEN4414 183 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783029 Common - transcriptional regulator, LysR family PSEEN4046 179 COG0583 LysR, Transcriptional regulator Transcription 104782347 Pathogen - hypothetical protein PSEEN3299 1 None None None 104780506 Common - oxidoreductase, short-chain alcohol dehydrogenase/reductase family PSEEN1303 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781149 Common - amidase PSEEN2010 215 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 104780371 Common pcaK 4-hydroxybenzoate transporter (MFS superfamily) PSEEN1162 108 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104782404 Common - UDP-glucuronate 5'-epimerase PSEEN3360 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104781419 Common - hypothetical protein PSEEN2301 2 None None None 104784321 Common - phospholipase D/Transphosphatidylase PSEEN5422 91 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 104781820 Common - transcriptional regulator, LysR family PSEEN2735 146 COG0583 LysR, Transcriptional regulator Transcription 104779667 Common - chorismate mutase PSEEN0389 11 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 104782318 Common - hypothetical protein PSEEN3269 10 COG5616 COG5616, Predicted integral membrane protein Function unknown 104783157 Common - phage Major tail protein PSEEN4182 5 None None None 104779982 Common - hypothetical protein PSEEN0742 9 None None None 104781036 Common aro phospho-2-dehydro-3-heoxyheptonate aldolase PSEEN1891 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 104782687 Common - sensor histidine kinase ArmS PSEEN3670 199 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781539 Common cobM precorrin-4 C11-methyltransferase PSEEN2427 201 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 104779607 Common - bifunctional protein (MaeB) [Includes: malic oxidoreductase N-terminal; phosphotransacetylase C-terminal PSEEN0327 202 COG0281 SfcA, Malic enzyme Energy production and conversion 104779786 Common ssb single-strand DNA-binding protein PSEEN0521 212 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 104781780 Common - hypothetical protein PSEEN2692 42 COG3320 COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 104781181 Common - hypothetical protein PSEEN2043 1 None None None 104783255 Common - type II secretion protein C PSEEN4282 1 None None None 104780124 Common - hypothetical protein PSEEN0901 5 None None None 104779885 Common - Zinc-dependent peptidase (M family) PSEEN0627 57 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 104779447 Common - efflux transporter, permease protein PSEEN0153 47 COG1289 COG1289, Predicted membrane protein Function unknown 104780307 Common ptsN phosphotransferase system, nitrogen regulatory IIA protein PSEEN1091 135 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 104783762 Common - hypothetical protein PSEEN4821 15 COG2921 COG2921, Uncharacterized conserved protein Function unknown 104782879 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein PSEEN3882 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 104784192 Common - hypothetical protein PSEEN5285 1 COG5583 COG5583, Uncharacterized small protein Function unknown 104783839 Common - bacterioferritin PSEEN4905 112 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 104784336 Common - hypothetical protein PSEEN5440 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 104781260 Common - hypothetical protein PSEEN2126 3 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 104780719 Common - magnesium/cobalt transporter, MIT family PSEEN1545 166 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 104783601 Common - hypothetical protein PSEEN4643 3 None None None 104782335 Common - transcriptional regulator, LysR family PSEEN3287 170 COG0583 LysR, Transcriptional regulator Transcription 104779359 Common - lipoprotein PSEEN0046 1 None None None 104782344 Pathogen - hypothetical protein PSEEN3296 1 None None None 104784431 Common - transcriptional repressor, DeoR family PSEEN5538 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 104783767 Common pbpA penicillin-binding protein 2 PSEEN4826 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 104779710 Common - DNA-binding response regulator, LuxR family PSEEN0437 197 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104781764 Common - outer membrane protein precursor PSEEN2676 107 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783061 Common - Type I secretion system membrane fusion protein, HlyD PSEEN4081 94 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104782149 Common - bicyclomycin/multidrug transport protein (MFS superfamily) PSEEN3088 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104782639 Common sixA phosphohistidine phosphatase SixA PSEEN3616 59 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 104782873 Common alaS alanyl-tRNA synthetase PSEEN3875 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104783514 Pathogen - hypothetical protein PSEEN4548 1 None None None 104781530 Common - sigma-54 dependent transcriptional regulator, Fis family/response regulator PSEEN2418 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104784094 Common - hypothetical protein PSEEN5182 61 COG3246 COG3246, Uncharacterized conserved protein Function unknown 104780063 Common - hypothetical protein PSEEN0833 6 None None None 104782382 Common - ranscriptional regulator, AraC family PSEEN3337 105 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104779413 Common citN citrate transporter PSEEN0104 51 COG2851 CitM, H+/citrate symporter Energy production and conversion 104781031 Common - arylesterase PSEEN1886 97 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 104784088 Common - oxidoreductase, FMN-binding PSEEN5176 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104782991 Common - hypothetical protein PSEEN4006 1 None None None 104781553 Common - oxidoreductase PSEEN2443 69 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 104783369 Common leuA 2-isopropylmalate synthase PSEEN4399 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 104782455 Common - hypothetical protein PSEEN3413 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 104784380 Common - hypothetical protein PSEEN5484 1 None None None 104781398 Common - sensory box histidine kinase PSEEN2279 210 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104782724 Common mfd transcription-repair coupling protein PSEEN3715 227 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 104780275 Common dppA-2 dipeptide ABC transporter, periplasmic peptide-binding protein PSEEN1059 206 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 104782526 Common nuoG NADH dehydrogenase subunit G PSEEN3489 181 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 104781193 Common - hypothetical protein PSEEN2056 100 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 104779481 Common gabT 4-aminobutyrate aminotransferase PSEEN0191 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 104781835 Common - long-chain-fatty-acid-CoA ligase PSEEN2753 214 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 104783689 Common rmlB-2 dTDP-D-glucose-4,6-dehydratase PSEEN4745 230 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 104782885 Common acsA acetyl-CoA synthetase PSEEN3888 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 104779404 Common - hypothetical protein PSEEN0094 39 COG2715 SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. General function prediction only 104783784 Common - hypothetical protein PSEEN4846 9 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 104783179 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha PSEEN4204 179 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 104780916 Common - xanthine dehydrogenase, large subunit XhdB PSEEN1764 110 COG4631 XdhB, Xanthine dehydrogenase, molybdopterin-binding subunit B Nucleotide transport and metabolism 104780252 Pathogen - hypothetical protein PSEEN1034 1 None None None 104782113 Common - hypothetical protein PSEEN3050 31 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 104780140 Common - peptidyl-prolyl cis-trans isomerase SlyD (FKBP-type) PSEEN0918 131 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 104783221 Common - hypothetical protein PSEEN4247 6 None None None 104781329 Common idh isocitrate dehydrogenase PSEEN2202 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 104781812 Common - hypothetical protein PSEEN2726 5 None None None 104780516 Common - glutathione S-transferase PSEEN1321 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104782229 Pathogen - hypothetical protein PSEEN3173 1 None None None 104784347 Common exbB solvent/drug/ferric siderophore transport protein ExbB PSEEN5451 128 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 104782140 Common - hypothetical protein PSEEN3078 26 COG5478 COG5478, Predicted small integral membrane protein Function unknown 104783552 Pathogen - hypothetical protein PSEEN4587 1 None None None 104784125 Common - hypothetical protein PSEEN5215 2 None None None 104782719 Common - hypothetical protein PSEEN3709 4 None None None 104780732 Common - transcriptional regulator, LysR family PSEEN1558 170 COG0583 LysR, Transcriptional regulator Transcription 104783387 Common edd phosphogluconate dehydratase PSEEN4417 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 104783036 Common xenA xenobiotic reductase A PSEEN4054 177 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104783864 Common - iron ABC transporter, periplasmic iron-binding protein PSEEN4935 113 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 104779449 Common - efflux transporter, membrane fusion protein PSEEN0155 152 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104780844 Common - transthyretin PSEEN1686 63 COG2351 COG2351, Transthyretin-like protein General function prediction only 104780559 Common purM phosphoribosylaminoimidazole synthetase PSEEN1370 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 104780865 Common ppnK inorganic polyphosphate/ATP-NAD kinase PSEEN1708 227 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 104781652 Common - hypothetical protein PSEEN2548 19 None None None 104783347 Common tatA-1 twin-arginine translocation protein TatA PSEEN4376 13 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 104781827 Common - hypothetical protein PSEEN2742 13 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 104779678 Common - amidohydrolase, carbon-nitrogen family PSEEN0400 207 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104783728 Common - zinc-dependent peptidase (neutral) PSEEN4786 87 COG2321 COG2321, Predicted metalloprotease General function prediction only 104780413 Common - bacterioferritin-associated ferredoxin Bfd PSEEN1205 36 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 104782926 Common - aerotaxis receptor PSEEN3931 158 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104784138 Common - hypothetical protein PSEEN5228 1 None None None 104780346 Common - hypothetical protein PSEEN1135 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104782794 Common - ATPase, ParA family protein PSEEN3789 199 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104783023 Common - cystathionine gamma-synthase PSEEN4039 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 104784101 Common - glycine betaine/L-proline ABC transporter, permease protein PSEEN5189 199 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 104784240 Common - hypothetical protein PSEEN5338 62 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 104781987 Common - transcriptional regulator, TetR family PSEEN2916 64 COG1309 AcrR, Transcriptional regulator Transcription 104780560 Common - hypothetical protein PSEEN1371 19 COG3249 COG3249, Uncharacterized protein conserved in bacteria Function unknown 104782450 Common - hypothetical protein PSEEN3408 49 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 104781442 Common - type II secretion system protein I XcpV-2; signal peptide PSEEN2327 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104783416 Common - putative SAM-dependent methyltransferase PSEEN4447 29 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 104781927 Common - SCO1/SenC family protein PSEEN2852 46 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 104780880 Common - hypothetical protein PSEEN1725 35 None None None 104783711 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN4768 132 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104780162 Common - porin OprD family PSEEN0940 15 None None None 104783934 Common - hypothetical protein PSEEN5014 41 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 104780487 Common livF branched-chain amino acid ABC transporter, ATP-binding protein PSEEN1282 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 104783734 Common hrpB helicase, ATP-dependent PSEEN4792 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 104784056 Common rfaF ADP-heptose; LPS heptosyltransferase II PSEEN5143 112 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 104781622 Common - multidrug efflux protein NorA PSEEN2516 118 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 104782857 Common bkdA1 2-oxoisovalerate dehydrogenase, alpha subunit PSEEN3853 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 104781269 Common - Aspartyl/Asparaginyl beta-hydroxylase PSEEN2136 37 COG3555 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases Posttranslational modification, protein turnover, chaperones 104783975 Common - hypothetical protein PSEEN5057 50 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 104779502 Common lsfA Thiol-specific antioxidant protein LsfA PSEEN0215 210 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 104780165 Common - DNA-binding heavy metal response regulator PSEEN0943 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104784328 Common radC DNA repair protein RadC PSEEN5431 179 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 104781142 Common - hydrolase, alpha/beta fold family PSEEN2003 31 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104782045 Common - NAD-dependent aldehyde dehydrogenase PSEEN2978 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104784229 Common - ABC transporter, permease protein PSEEN5324 171 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 104783526 Common - fusaric acid resistance protein PSEEN4560 128 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104780439 Common - outer memebrane protein, OmpA family PSEEN1232 168 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104780385 Common - iron-chelator utilization protein PSEEN1176 63 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 104781200 Common - oxidoreductase, short chain dehydrogenase/reductase family PSEEN2063 79 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 104781305 Common - transporter, LysE family PSEEN2174 109 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104781354 Pathogen - hypothetical protein PSEEN2229 1 None None None 104780680 Common - polysaccharide biosynthesis protein; O-antigen biosynthesis protein PSEEN1500 167 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104780603 Common - nitrite reductase, small subunit NirD PSEEN1419 43 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 104782957 Common - ABC transporter, ATP-binding protein/permease protein PSEEN3964 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104780787 Common - 4-amino-4-deoxychorismate lyase PSEEN1622 181 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 104780561 Common - permease PSEEN1372 173 COG0628 PerM, Predicted permease General function prediction only 104780480 Common - beta-lactamase PSEEN1275 106 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 104780425 Common - electron transport complex protein RnfD PSEEN1217 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 104779845 Common - hypothetical protein PSEEN0585 31 COG3897 COG3897, Predicted methyltransferase General function prediction only 104783008 Common - hypothetical protein PSEEN4024 2 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 104780468 Common - hypothetical protein PSEEN1263 6 None None None 104781334 Common infA translation initiation factor IF-1 PSEEN2208 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 104782866 Common - Threonine synthase PSEEN3862 216 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 104784162 Common - oxidoreductase, 2OG-Fe(II) oxygenase family PSEEN5252 30 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 104779766 Common rplX 50S ribosomal protein L24 PSEEN0501 212 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 104779908 Common - prepilin peptidase; typeII/IV secretion PSEEN0654 5 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 104782097 Common - hypothetical protein PSEEN3034 14 None None None 104783074 Common ruvC Holliday junction resolvase PSEEN4094 195 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 104782935 Common - hypothetical protein PSEEN3940 30 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 104781028 Common greB transcription elongation factor GreB PSEEN1883 201 COG0782 GreA, Transcription elongation factor Transcription 104783584 Common - type III effector HopPmaJ PSEEN4625 15 None None None 104784237 Common ppx exopolyphosphatase (ExopolyPase) (Metaphosphatase) PSEEN5335 179 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 104779497 Common tauD taurine dioxygenase PSEEN0210 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104780074 Common - ion mechanosensitive channel PSEEN0846 227 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104781272 Common - thioesterase PSEEN2139 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 104783270 Common nadB L-aspartate oxidase PSEEN4297 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 104780838 Common - hypothetical protein PSEEN1680 17 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 104781430 Common mexE multidrug efflux RND membrane fusion protein MexE PSEEN2313 155 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104783158 Pathogen - phage protein PSEEN4183 1 None None None 104780874 Common - hypothetical protein PSEEN1717 62 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 104782105 Common macB macrolide ABC efflux protein MacB PSEEN3042 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 104779641 Common - acyl carrier protein PSEEN0362 45 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781108 Common rpmI 50S ribosomal protein L35 PSEEN1965 140 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 104780811 Common leuC isopropylmalate isomerase large subunit PSEEN1650 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 104782084 Common - hypothetical protein PSEEN3021 63 COG2346 COG2346, Truncated hemoglobins General function prediction only 104781909 Common - hypothetical protein PSEEN2834 56 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 104783105 Common - hypothetical protein PSEEN4129 189 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 104779754 Common rpsJ 30S ribosomal protein S10 PSEEN0489 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 104779857 Common - hypothetical protein PSEEN0597 1 None None None 104782600 Common - acetyltransferase, GNAT family PSEEN3575 23 COG3153 COG3153, Predicted acetyltransferase General function prediction only 104784141 Common - transcriptional regulator, LysR family PSEEN5231 192 COG0583 LysR, Transcriptional regulator Transcription 104781944 Common - xanthine dehydrogenase accessory factor PSEEN2872 106 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 104781219 Common lpxH UDP-2,3-diacylglucosamine hydrolase PSEEN2084 79 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 104784360 Common phoB phosphate regulon transcriptional regulatory protein PhoB PSEEN5464 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104780026 Common - hypothetical protein PSEEN0793 177 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 104779731 Common - dioxygenases related to 2-nitropropane dioxygenase PSEEN0458 92 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 104784000 Common - methyl-accepting chemotaxis transducer PSEEN5082 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104783718 Common - hypothetical protein PSEEN4775 3 None None None 104780666 Common - N-ethylammeline chlorohydrolase PSEEN1485 176 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 104782053 Common - transcriptional regulator, GntR family PSEEN2988 219 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104782085 Common - hypothetical protein PSEEN3022 1 None None None 104779839 Common - lipoprotein PSEEN0579 21 COG3495 COG3495, Uncharacterized protein conserved in bacteria Function unknown 104782464 Common - hypothetical protein PSEEN3423 7 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 104782565 Common - putative monovalent cation/H+ antiporter subunit F PSEEN3537 46 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 104780980 Common - ABC efflux transporter, permease/ATP-binding protein PSEEN1831 249 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 104781979 Common - hypothetical protein PSEEN2908 42 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 104781523 Common cioB-2 ubiquinol oxidase subunit II, cyanide insensitive PSEEN2411 151 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 104780224 Common - hypothetical protein PSEEN1004 17 COG3134 COG3134, Predicted outer membrane lipoprotein Function unknown 104782443 Common - type 1 pili protein CsuB PSEEN3400 7 COG5430 COG5430, Uncharacterized secreted protein Function unknown 104779775 Common secY preprotein translocase subunit SecY PSEEN0510 234 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 104780193 Pathogen - hypothetical protein PSEEN0972 1 None None None 104782188 Common nemA N-ethylmaleimide reductase, FMN-linked PSEEN3128 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104779335 Common trkA potassium transporter peripheral membrane component PSEEN0022 146 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 104781476 Common - hypothetical protein PSEEN2362 2 None None None 104782830 Common fliC flagellin PSEEN3826 122 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 104781412 Common galU glucose-1-phosphate uridylyltransferase PSEEN2294 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 104782005 Common - hypothetical protein PSEEN2938 9 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 104779716 Common gph phosphoglycolate phosphatase PSEEN0443 208 COG0546 Gph, Predicted phosphatases General function prediction only 104781449 Common - type II secretion pathway protein F (XcpS-2) PSEEN2334 139 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 104782892 Common - hypothetical protein PSEEN3896 39 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104784440 Common atpB F0F1 ATP synthase subunit A PSEEN5549 203 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 104779916 Common - hypothetical protein PSEEN0662 26 COG2030 MaoC, Acyl dehydratase Lipid metabolism 104784004 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN5087 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104783066 Common pal peptidoglycan-associated lipoprotein precursor PSEEN4086 157 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104783987 Common phaD transcriptional regulator, TetR family PSEEN5069 58 COG1309 AcrR, Transcriptional regulator Transcription 104781213 Common - surface antigen PSEEN2078 130 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 104784170 Common - amino acid ABC transporter, permease protein PSEEN5260 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104784255 Common hemC porphobilinogen deaminase PSEEN5353 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 104781183 Common - trehalose synthase/glycosidase fusion protein PSEEN2045 173 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 104784019 Common - methyl-accepting chemotaxis transducer PSEEN5104 143 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780740 Common - hypothetical protein PSEEN1566 15 COG0730 COG0730, Predicted permeases General function prediction only 104784064 Common creC sensory histidine kinase CreC PSEEN5151 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783963 Common - flavin-containing monamine oxidase family protein PSEEN5045 41 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 104783150 Common - phage tail protein PSEEN4175 13 COG4723 COG4723, Phage-related protein, tail component Function unknown 104780497 Common - hypothetical protein PSEEN1294 2 None None None 104781246 Common - type II secretion system protein G PSEEN2111 17 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104783694 Common - transcriptional regulator, TetR family PSEEN4750 88 COG1309 AcrR, Transcriptional regulator Transcription 104782171 Common - 3-ketoacyl-(acyl-carrier-protein) reductase PSEEN3111 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104780008 Common omlA outer membrane lipoprotein OmlA PSEEN0773 64 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 104783980 Common pyrC dihydroorotase PSEEN5062 209 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 104780631 Common - hypothetical protein PSEEN1448 74 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 104779346 Common - glycine betaine-binding protein PSEEN0033 64 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 104780796 Common - hypothetical protein PSEEN1632 45 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 104782423 Common - hypothetical protein PSEEN3379 43 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 104783989 Common phaI polyhydroxyalkanoate granule-associated protein GA1 PSEEN5071 18 None None None 104780149 Common ampD N-acetyl-anhydromuranmyl-L-alanine amidase PSEEN0927 106 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 104780996 Common dctA-2 C4-dicarboxylate transporter DctA PSEEN1849 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 104780437 Common - hypothetical protein PSEEN1230 9 None None None 104783302 Common - Glycerophosphodiester phosphodiesterase PSEEN4329 110 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 104781789 Common - cyclopropane-fatty-acyl-phospholipid synthase PSEEN2702 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 104780230 Common iscU scaffold protein PSEEN1011 148 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 104781009 Pathogen - hypothetical protein PSEEN1864 1 None None None 104781160 Common aroQ-2 3-dehydroquinate dehydratase PSEEN2021 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 104783243 Common - hydrolase, MutT/nudix family protein PSEEN4270 94 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104780001 Common - D-lactate deshydrogenase PSEEN0766 199 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 104781140 Common - acetyltransferase, GNAT family PSEEN2001 95 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 104782819 Common fliH flagellar assembly protein H PSEEN3814 61 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 104783420 Common - hypothetical protein PSEEN4451 10 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 104780432 Common - hypothetical protein PSEEN1225 23 COG3608 COG3608, Predicted deacylase General function prediction only 104780617 Common - ABC transporter, ATP-binding protein PSEEN1434 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104781337 Common ftsK Cell division protein FtsK PSEEN2212 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 104780451 Common - methyl-accepting chemotaxis transducer PSEEN1245 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782073 Common - helicase; UvrD/REP family PSEEN3010 168 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 104781528 Common - sensor histidine kinase PSEEN2416 215 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104784217 Common ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase PSEEN5312 143 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 104779930 Common - hypothetical protein PSEEN0678 130 COG1739 COG1739, Uncharacterized conserved protein Function unknown 104782623 Common cynT-1 carbonic anhydrase PSEEN3600 154 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 104780302 Common - hypothetical protein PSEEN1086 4 None None None 104780391 Common - ATP-dependent DNA helicase Lhr PSEEN1182 227 COG1201 Lhr, Lhr-like helicases General function prediction only 104779319 Common recF recombination protein F PSEEN0003 166 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 104784430 Common glmS D-fructose-6-phosphate amidotransferase PSEEN5537 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 104782129 Common - Fe uptake ABC transporter, periplasmic binding protein PSEEN3067 110 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 104781969 Common - transcriptional regulator, AraC family PSEEN2898 61 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104783953 Common - long-chain acyl-CoA thioester hydrolase family protein PSEEN5034 61 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 104781425 Common nfsB dihydropteridine reductase PSEEN2307 69 COG0778 NfnB, Nitroreductase Energy production and conversion 104782588 Common - hypothetical protein PSEEN3560 63 None None None 104782707 Common - response regulator PSEEN3696 226 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 104783752 Common - hypothetical protein PSEEN4811 60 COG1434 COG1434, Uncharacterized conserved protein Function unknown 104784354 Common hupA DNA-binding protein HU-alpha PSEEN5458 208 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 104784236 Common trxA thioredoxin PSEEN5333 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 104779462 Common - hypothetical protein PSEEN0169 23 None None None 104781635 Common - FecR-like transmembrane sensor PSEEN2530 44 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104780119 Common - lipoprotein PSEEN0895 5 None None None 104781922 Common - hypothetical protein PSEEN2847 5 None None None 104780033 Common - hypothetical protein PSEEN0800 32 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 104782380 Common - transcriptional regulator, LuxR family PSEEN3335 3 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104780175 Common - disulfide bond formation protein B PSEEN0954 27 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 104783184 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase PSEEN4209 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 104780895 Common ppsA phosphoenolpyruvate synthase PSEEN1742 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 104779650 Common cvrA potassium/proton antiporter PSEEN0371 136 COG3263 COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain Inorganic ion transport and metabolism 104781357 Pathogen - hypothetical protein PSEEN2233 2 None None None 104779757 Common rplW 50S ribosomal protein L23 PSEEN0492 216 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 104779491 Common - acyl-CoA dehydrogenase PSEEN0203 70 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104781589 Pathogen - hypothetical protein PSEEN2479 1 None None None 104782650 Common - dienelactone hydrolase PSEEN3627 90 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 104782418 Common - hypothetical protein PSEEN3374 8 COG4392 COG4392, Predicted membrane protein Function unknown 104781192 Common - decarboxylase PSEEN2055 42 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 104782227 Common - hypothetical protein PSEEN3170 1 None None None 104784220 Common pepP aminopeptidase P PSEEN5315 234 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 104784404 Common - hypothetical protein PSEEN5510 7 None None None 104781750 Pathogen - hypothetical protein PSEEN2661 1 None None None 104780249 Common - putative hydroxylase PSEEN1031 44 COG3128 PiuC, Uncharacterized iron-regulated protein Function unknown 104781782 Common - sensory box histidine kinase PSEEN2694 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781946 Common - oxidase, small subunit PSEEN2874 120 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 104781957 Common - aldehyde dehydrogenase PSEEN2886 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104782373 Common - hypothetical protein PSEEN3326 7 None None None 104782742 Common - hypothetical protein PSEEN3734 71 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 104779512 Common - RNA-binding transcription accessory protein PSEEN0226 184 COG2183 Tex, Transcriptional accessory protein Transcription 104780608 Common pcaQ pca operon transcriptional activator PcaQ PSEEN1425 177 COG0583 LysR, Transcriptional regulator Transcription 104781633 Common - hypothetical protein PSEEN2527 1 None None None 104781316 Common - transcriptional regulator PSEEN2187 58 COG1396 HipB, Predicted transcriptional regulators Transcription 104779764 Common rpsQ 30S ribosomal protein S17 PSEEN0499 234 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 104781883 Common - Tn4652 cointegrate resolution protein T PSEEN2808 22 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 104781757 Common - malate dehydrogenase PSEEN2669 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 104783051 Common - peptidase M48 family PSEEN4070 124 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 104783808 Common cobG precorrin-3B synthase PSEEN4871 79 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 104780798 Common - hypothetical protein PSEEN1634 6 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 104783109 Common - phage tail fiber assembly-like protein PSEEN4134 2 None None None 104783631 Common - hypothetical protein PSEEN4676 75 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 104779714 Common - polyamine ABC transporter, permease protein PSEEN0441 198 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 104783227 Common xerD site-specific tyrosine recombinase XerD PSEEN4254 231 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 104783961 Common - hypothetical protein PSEEN5043 120 COG2353 COG2353, Uncharacterized conserved protein Function unknown 104779792 Common - hypothetical protein PSEEN0527 43 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 104781818 Common - glutathione S-transferase PSEEN2733 56 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104782609 Common - transcriptional regulator, LuxR family PSEEN3585 121 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104781795 Common - HlyD family secretion protein PSEEN2708 145 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104782214 Common - hypothetical protein PSEEN3157 35 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 104782362 Common - hypothetical protein PSEEN3315 13 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 104782643 Common - hypothetical protein PSEEN3620 13 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 104782534 Common - TonB-dependent siderophore receptor PSEEN3497 77 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104781643 Common - hypothetical protein PSEEN2539 33 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 104781006 Common arcB ornithine cyclodeaminase PSEEN1859 86 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 104781861 Common - chemotaxis transducer PSEEN2784 158 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104779793 Common - ClpA/B-type protease PSEEN0528 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 104783536 Common - hypothetical protein PSEEN4570 11 None None None 104783896 Common - hypothetical protein PSEEN4970 48 COG3150 COG3150, Predicted esterase General function prediction only 104782482 Common - transcriptional regulator, AraC family PSEEN3442 66 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104782659 Common lpd dihydrolipoamide dehydrogenase PSEEN3638 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 104779928 Common - hydroxydechloroatrazine ethylaminohydrolase PSEEN0675 171 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 104783524 Common - hypothetical protein PSEEN4558 9 None None None 104783779 Common - hypothetical protein PSEEN4841 60 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104784158 Common serA D-3-phosphoglycerate dehydrogenase PSEEN5248 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 104782013 Common - exopolysaccharide biosynthesis related tyrosine-protein kinase PSEEN2946 134 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104781687 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN2587 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779911 Common - hypothetical protein PSEEN0657 10 COG4655 COG4655, Predicted membrane protein Function unknown 104783373 Common eda keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase PSEEN4403 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 104784216 Common - iron ABC transporter, periplasmic iron-binding protein PSEEN5311 124 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 104779897 Common - response regulator PSEEN0641 90 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782471 Common - hypothetical protein PSEEN3430 12 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104783000 Common - hypothetical protein PSEEN4015 59 COG3825 COG3825, Uncharacterized protein conserved in bacteria Function unknown 104780147 Common nadC nicotinate-nucleotide pyrophosphorylase PSEEN0925 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 104782287 Common - hypothetical protein PSEEN3236 4 None None None 104779682 Common - transcriptional regulator, AsnC family PSEEN0407 129 COG1522 Lrp, Transcriptional regulators Transcription 104780154 Common - phosphotransferase system FruB, fructose-specific EI/HPr/EIIA components PSEEN0932 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 104782648 Common - amidohydrolase PSEEN3625 9 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 104779587 Common - sulfur carrier protein ThiS PSEEN0306 19 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 104780782 Common plsX fatty acid/phospholipid synthesis protein PSEEN1616 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 104779694 Common cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase PSEEN0421 185 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 104781228 Common ureD urease accessory protein UreD PSEEN2093 77 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 104780047 Common - hypothetical protein PSEEN0816 15 None None None 104782394 Pathogen - hypothetical protein PSEEN3350 1 None None None 104783443 Common - glutathione S-transferase PSEEN4475 63 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104781578 Common - hypothetical protein PSEEN2468 14 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 104782292 Common - cation ABC transporter, permease protein PSEEN3241 171 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 104781489 Common - endonuclease PSEEN2376 15 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 104783512 Common algA mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AlgA PSEEN4546 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 104782962 Common - hypothetical protein PSEEN3970 1 None None None 104783936 Common - hypothetical protein PSEEN5016 40 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 104780543 Common - arsenate reductase PSEEN1354 108 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 104783331 Common ttgA multidrug/solvent efflux RND membrane fusion protein PSEEN4360 152 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104781103 Common - hypothetical protein PSEEN1960 10 None None None 104782266 Common - shikimate 5-dehydrogenase PSEEN3214 207 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 104783799 Common fis DNA-binding protein Fis PSEEN4862 93 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 104779357 Common - hypothetical protein PSEEN0044 5 None None None 104782673 Common - lipoprotein PSEEN3655 5 COG3524 KpsE, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 104782683 Common - multidrug efflux outer membrane protein, RND family PSEEN3666 113 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104782852 Common - flagella synthesis protein FlgN PSEEN3848 5 COG3418 COG3418, Flagellar biosynthesis/type III secretory pathway chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 104780325 Common - multidrug efflux protein PSEEN1109 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104779530 Common cysQ 3'(2'),5'-bisphosphate nucleotidase PSEEN0246 179 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 104781380 Common - diguanylate cyclase (GGDEF) domain PSEEN2260 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104784108 Common - permease, MFS superfamily PSEEN5196 77 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 104783657 Common ilvH acetolactate synthase 3 regulatory subunit PSEEN4710 189 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 104780117 Common mqo-1 malate:quinone oxidoreductase PSEEN0893 55 COG0579 COG0579, Predicted dehydrogenase General function prediction only 104779539 Common - phosphatase PSEEN0255 81 COG0622 COG0622, Predicted phosphoesterase General function prediction only 104781844 Common - glycosyl transferase, group 2 family protein PSEEN2762 21 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104781509 Common - trans-aconitate methyltransferase PSEEN2396 67 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 104783905 Common - transcriptional regulator, LysR family PSEEN4981 144 COG0583 LysR, Transcriptional regulator Transcription 104783323 Common - transcriptional regulator, LysR family PSEEN4351 172 COG0583 LysR, Transcriptional regulator Transcription 104784348 Common exbD biopolymer transport protein ExbD PSEEN5452 135 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 104780937 Common - hypothetical protein PSEEN1786 16 None None None 104781678 Common - hypothetical protein PSEEN2576 1 None None None 104779500 Common tauA taurine ABC transporter, periplasmic taurine-binding protein PSEEN0213 96 COG4521 TauA, ABC-type taurine transport system, periplasmic component Inorganic ion transport and metabolism 104784073 Common soxD sarcosine oxidase, delta subunit PSEEN5160 33 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 104780601 Common narB assimilatory nitrate reductase PSEEN1417 198 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 104781418 Common sstT transporter, sodium-dicarboxylate symporter family PSEEN2300 124 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 104783427 Common colR response regulator ColR PSEEN4458 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104779509 Common - transcriptional regulator, TetR family PSEEN0223 7 COG1309 AcrR, Transcriptional regulator Transcription 104782552 Common - hypothetical protein PSEEN3515 2 COG4575 ElaB, Uncharacterized conserved protein Function unknown 104783233 Common rpsP 30S ribosomal protein S16 PSEEN4260 211 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 104783261 Common recO DNA repair protein RecO PSEEN4288 61 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 104782434 Common - hypothetical protein PSEEN3391 1 None None None 104780731 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSEEN1557 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779777 Common rpsM 30S ribosomal protein S13 PSEEN0511 246 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 104780620 Common - hypothetical protein PSEEN1437 16 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 104781251 Common - monoamine oxidase PSEEN2116 21 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 104779420 Common - acetyl-CoA hydrolase/transferase PSEEN0113 96 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 104781949 Common - Phosphonate-binding periplasmic protein PSEEN2877 80 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 104781332 Common clpS ATP-dependent Clp protease adaptor protein ClpS PSEEN2206 122 COG2127 COG2127, Uncharacterized conserved protein Function unknown 104780738 Common - transcriptional regulator (MarR family) PSEEN1564 78 COG1846 MarR, Transcriptional regulators Transcription 104780407 Common - hypothetical protein PSEEN1199 123 COG2606 EbsC, Uncharacterized conserved protein Function unknown 104782069 Common - hypothetical protein PSEEN3006 3 None None None 104781237 Pathogen - hypothetical protein PSEEN2102 1 None None None 104780172 Common - chemotaxis signal transduction protein CheW-like PSEEN0950 150 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104783300 Common - FecR-like transmembrane sensor PSEEN4327 44 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104783948 Common - cytochrome c' PSEEN5029 23 COG3909 COG3909, Cytochrome c556 Energy production and conversion 104779633 Common - hypothetical protein PSEEN0354 26 None None None 104781178 Common - pyridine nucleotide-disulphide oxidoreductase PSEEN2040 195 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 104779673 Common pqqD pyrroloquinoline quinone biosynthesis protein PqqD PSEEN0395 16 None None None 104782710 Common - hypothetical protein PSEEN3700 9 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 104780657 Common - transcriptional regulator, BolA superfamily PSEEN1476 94 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 104779883 Common - transcriptional regulator PSEEN0625 10 COG2932 COG2932, Predicted transcriptional regulator Transcription 104780754 Common - aminotransferase AlaT PSEEN1583 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104781085 Common - hypothetical protein PSEEN1942 17 COG5515 COG5515, Uncharacterized conserved small protein Function unknown 104783296 Pathogen - hypothetical protein PSEEN4323 1 None None None 104780053 Common - hypothetical protein PSEEN0822 1 None None None 104780374 Common pcaF beta-ketoadipyl CoA thiolase PSEEN1165 169 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104779951 Common - tyrosine phosphatase PSEEN0708 21 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 104783090 Common - hypothetical protein PSEEN4113 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 104784031 Common bioD dithiobiotin synthetase PSEEN5117 172 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 104780108 Common - hypothetical protein PSEEN0884 37 COG3380 COG3380, Predicted NAD/FAD-dependent oxidoreductase General function prediction only 104782633 Pathogen - hypothetical protein PSEEN3610 1 None None None 104782781 Common dsbE thiol:disulfide interchange protein DsbE PSEEN3776 138 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 104784143 Common cadR transcriptional regulator CadR PSEEN5233 134 COG0789 SoxR, Predicted transcriptional regulators Transcription 104782988 Common def2 peptide deformylase PSEEN4003 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 104781089 Common - proteic killer active protein PSEEN1946 71 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 104782563 Common - putative monovalent cation/H+ antiporter subunit D PSEEN3535 120 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 104782579 Common - transcriptional regulator, AraC family PSEEN3551 70 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104782016 Common - polysaccharide export protein PSEEN2949 117 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 104782191 Pathogen - hypothetical protein PSEEN3131 1 None None None 104781722 Common - transcriptional regulator, LysR family PSEEN2629 107 COG0583 LysR, Transcriptional regulator Transcription 104782475 Common - hypothetical protein PSEEN3435 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104783671 Common - hypothetical protein PSEEN4725 235 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104781259 Common - hypothetical protein PSEEN2125 19 COG0730 COG0730, Predicted permeases General function prediction only 104784266 Pathogen - lipoprotein Lppl PSEEN5364 1 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 104781452 Common - NAD-dependent deacetylase 1 (Regulatory protein SIR2 homolog) PSEEN2337 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 104784334 Common - catabolite repression control protein Crc PSEEN5437 194 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 104781479 Common - hypothetical protein PSEEN2365 51 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 104781825 Pathogen - hypothetical protein PSEEN2740 1 None None None 104780570 Common cobD cobalamin biosynthesis protein PSEEN1381 154 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 104781917 Common - secretion type II protein related to protein G. signal peptide PSEEN2842 13 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104782993 Common - lipoprotein PSEEN4008 14 None None None 104780126 Common - methyl-accepting chemotaxis transducer PSEEN0903 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104781981 Common - transcriptional regulator, AraC family PSEEN2910 90 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104779977 Common gabP-3 amino acid permease PSEEN0737 177 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104783338 Common lon-2 DNA-binding ATP-dependent protease La-2 PSEEN4367 214 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 104780266 Common - hypothetical protein PSEEN1049 31 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 104782300 Common - hypothetical protein PSEEN3249 8 COG4460 COG4460, Uncharacterized protein conserved in bacteria Function unknown 104783874 Common mutL DNA mismatch repair protein PSEEN4945 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 104780946 Common - cytochrome oxidase maturation protein, cbb3-type CcoS PSEEN1795 35 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 104782153 Common hpaG-1 4-hydroxyphenylacetate degradation; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HHDD isomerase) (5-carboxymethyl-2-hydroxymuconate delta-isomerase) PSEEN3092 171 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 104779624 Common - 3-oxoacyl-(acyl carrier protein) synthase II PSEEN0345 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104780772 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase PSEEN1605 145 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 104782323 Common - hypothetical protein PSEEN3275 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 104783438 Common - nucleotide-binding protein PSEEN4469 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 104780918 Common - transcriptional regulator (GntR-family) PSEEN1766 113 COG1802 GntR, Transcriptional regulators Transcription 104783046 Common dapA dihydrodipicolinate synthase PSEEN4064 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 104781666 Common - dioxygenase PSEEN2562 6 None None None 104783088 Common - hypothetical protein PSEEN4111 19 COG3946 VirJ, Type IV secretory pathway, VirJ component Intracellular trafficking and secretion 104780725 Common aprI Inhibitor of protease aprA PSEEN1551 4 None None None 104782307 Common - hypothetical protein PSEEN3256 1 None None None 104784371 Common - long-chain acyl-CoA thioester hydrolase PSEEN5475 132 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 104779992 Common - Adenine specific DNA methylase PSEEN0753 137 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 104781462 Common - TonB-dependent outer membrane receptor PSEEN2348 120 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 104784021 Common fbp fructose-1,6-bisphosphatase PSEEN5106 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 104781498 Common - transporter, MFS family PSEEN2385 115 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104782726 Common - helicase, SNF2/RAD54 family PSEEN3717 128 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 104783189 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase PSEEN4214 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 104780359 Common - hypothetical protein PSEEN1148 1 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 104779622 Common - hypothetical protein PSEEN0343 12 None None None 104783126 Common - pyocin R2_PP, tail formation protein gpU PSEEN4151 21 COG3499 COG3499, Phage protein U General function prediction only 104784086 Common - electron transfer flavoprotein, alpha subunit PSEEN5174 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 104780461 Common - transcriptional regulator, TetR family PSEEN1256 7 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 104781480 Common nspC carboxynorspermidine decarboxylase NspC PSEEN2366 58 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 104779436 Common - Surface adhesion protein PSEEN0141 167 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 104782197 Common catC muconolactone delta-isomerase (MIase) PSEEN3137 23 COG4829 CatC1, Muconolactone delta-isomerase Secondary metabolites biosynthesis, transport, and catabolism 104779994 Common - hypothetical protein PSEEN0755 24 COG4127 COG4127, Uncharacterized conserved protein Function unknown 104783854 Common - hypothetical protein PSEEN4924 139 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 104779823 Common fdoG formate dehydrogenase-O, major subunit PSEEN0563 174 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 104784423 Common - polyketide synthase PSEEN5530 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104783810 Common cbiD cobalt-precorrin-6A synthase PSEEN4873 80 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 104783085 Common - lipoprotein PSEEN4106 1 None None None 104780591 Common - C4-dicarboxylate transporter/malic acid transport protein PSEEN1407 27 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 104783394 Common - CoA-transferase family III (CaiB/BaiF) PSEEN4425 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 104781874 Common paaL phenylacetic acid degradation, subunit of multicomponent oxygenase PSEEN2799 38 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 104779527 Common - hypothetical protein PSEEN0243 61 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 104782208 Common - hypothetical protein PSEEN3149 1 None None None 104781881 Common paaN bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase PSEEN2806 214 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104783450 Common ftsQ cell division protein FtsQ PSEEN4482 71 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 104783283 Common - autotransporter protein with pertactin-type adhesion domains PSEEN4310 123 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104784417 Common cycC adenosine 5'-phosphosulfate kinase PSEEN5524 145 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 104784251 Pathogen - hypothetical protein PSEEN5349 1 None None None 104780030 Common truB tRNA pseudouridine 55 synthase PSEEN0797 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 104780911 Common - transporter PSEEN1759 158 COG2252 COG2252, Permeases General function prediction only 104780805 Common - hydrolase PSEEN1644 28 COG1647 COG1647, Esterase/lipase General function prediction only 104779879 Common - Long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase LuxE PSEEN0621 17 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 104782940 Common - secretion protein, TPS system PSEEN3947 66 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 104783644 Common - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) PSEEN4690 136 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 104781396 Pathogen - hypothetical protein PSEEN2277 1 None None None 104783730 Common - transcriptional regulator, AsnC family PSEEN4788 153 COG1522 Lrp, Transcriptional regulators Transcription 104783325 Common - metallo-beta-lactamase superfamily protein PSEEN4353 33 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 104784028 Common - diguanylate cyclase (GGDEF domain) PSEEN5114 165 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104783170 Common - esterase PSEEN4195 101 COG0627 COG0627, Predicted esterase General function prediction only 104780928 Pathogen - hypothetical protein PSEEN1777 1 None None None 104783859 Common rpsR 30S ribosomal protein S18 PSEEN4929 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 104779868 Common ribB 3,4 dihydroxy-2-butanone-4-phosphate synthase PSEEN0609 223 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 104780280 Common - hypothetical protein PSEEN1064 1 None None None 104782134 Common - hypothetical protein PSEEN3072 74 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104783223 Common - hypothetical protein PSEEN4249 1 None None None 104779593 Common - hypothetical protein PSEEN0313 13 None None None 104784304 Common - hypothetical protein PSEEN5405 25 COG5383 COG5383, Uncharacterized protein conserved in bacteria Function unknown 104782976 Pathogen - hypothetical protein PSEEN3987 1 None None None 104781706 Common - hypothetical protein PSEEN2607 1 None None None 104782253 Common paaH 3-hydroxybutyryl-CoA dehydrogenase PSEEN3198 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 104784303 Common - transcriptional regulator, LysR family PSEEN5404 146 COG0583 LysR, Transcriptional regulator Transcription 104782912 Common - metallo-dependent phosphoesterase PSEEN3916 67 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 104782573 Common fadB1x enoyl-CoA hydratase, FadB1x PSEEN3545 188 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104783795 Common accC-1 acetyl-CoA carboxylase biotin carboxylase subunit PSEEN4857 233 COG0439 AccC, Biotin carboxylase Lipid metabolism 104780447 Common - ABC transporter, permease protein PSEEN1240 196 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 104781015 Common lon DNA-binding ATP-dependent protease La PSEEN1870 213 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 104783596 Common - transporter, bile acid/Na+ symporter family PSEEN4637 19 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 104779572 Common - oxidoreductase, GMC family PSEEN0291 80 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 104780440 Common - hypothetical protein PSEEN1233 1 COG3776 COG3776, Predicted membrane protein Function unknown 104784378 Common aspA aspartate ammonia-lyase PSEEN5482 227 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 104780227 Common cysE serine O-acetyltransferase PSEEN1007 193 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 104783929 Common - hypothetical protein PSEEN5009 138 COG2081 COG2081, Predicted flavoproteins General function prediction only 104783592 Common - cytochrome b561 family protein PSEEN4633 45 COG3658 COG3658, Cytochrome b Energy production and conversion 104781542 Common - hypothetical protein PSEEN2431 11 None None None 104783613 Pathogen - hypothetical protein PSEEN4657 1 None None None 104779361 Common - hydrolase, HAD family PSEEN0048 165 COG0546 Gph, Predicted phosphatases General function prediction only 104781045 Common - hypothetical protein PSEEN1900 35 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 104783920 Common - carbamoyltransferase, NodU family PSEEN4996 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 104783168 Common truD tRNA pseudouridine synthase D PSEEN4193 79 COG0585 COG0585, Uncharacterized conserved protein Function unknown 104781563 Common - transcriptional regulator, LysR family PSEEN2453 116 COG0583 LysR, Transcriptional regulator Transcription 104780867 Common - hypothetical protein PSEEN1710 26 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 104781606 Common - ABC transporter, permease/ATP-binding protein PSEEN2497 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104780013 Common dnaJ Chaperone protein DnaJ PSEEN0779 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 104782354 Common arsB arsenite efflux pump PSEEN3307 98 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 104783742 Common - acyl-CoA dehydrogenase (AidB) PSEEN4800 126 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104779962 Common - hypothetical protein PSEEN0719 109 COG2081 COG2081, Predicted flavoproteins General function prediction only 104780477 Common - hypothetical protein PSEEN1272 20 COG5615 COG5615, Predicted integral membrane protein Function unknown 104780676 Pathogen - hypothetical protein PSEEN1496 1 None None None 104782594 Common - ABC transporter, permease protein PSEEN3567 221 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 104779455 Common - hypothetical protein PSEEN0162 9 COG5589 COG5589, Uncharacterized conserved protein Function unknown 104783652 Common - paraquat-inducible protein A PSEEN4698 54 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 104782044 Common - quinohemoprotein amine dehydrogenase 60 kDa subunit PSEEN2977 5 None None None 104783316 Common - hypothetical protein PSEEN4344 27 COG4705 COG4705, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 104784112 Common - hypothetical protein PSEEN5201 2 None None None 104782929 Common - sodium-solute symporter PSEEN3934 152 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 104783027 Common - hypothetical protein PSEEN4044 56 COG3781 COG3781, Predicted membrane protein Function unknown 104780907 Common pyrD dihydroorotate dehydrogenase 2 PSEEN1755 233 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 104780522 Common - hypothetical protein PSEEN1328 54 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 104780554 Common mazG nucleoside triphosphate pyrophosphohydrolase PSEEN1365 158 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 104780699 Common folE GTP cyclohydrolase I PSEEN1521 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 104784044 Common - exonuclease PSEEN5130 97 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 104783660 Common - hypothetical protein PSEEN4714 10 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 104783804 Common - hypothetical protein PSEEN4867 3 None None None 104780317 Common ttg2C toluene tolerance ABC transporter, periplasmic substrate-binding protein PSEEN1101 99 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 104783245 Common - type II secretion system protein N PSEEN4272 1 None None None 104780327 Pathogen - hypothetical protein PSEEN1111 1 None None None 104784014 Common - hypothetical protein PSEEN5098 41 COG3758 COG3758, Uncharacterized protein conserved in bacteria Function unknown 104783021 Common - 5-carboxymethyl-2-hydroxymuconate delta isomerase PSEEN4037 12 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 104780188 Pathogen - hypothetical protein PSEEN0967 1 None None None 104783642 Common - type IV pili biogenesis protein FimT PSEEN4688 1 None None None 104781389 Common - Sterol carrier protein, SCP-2 family PSEEN2269 16 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 104779324 Common - hypothetical protein PSEEN0009 16 COG0730 COG0730, Predicted permeases General function prediction only 104779781 Common rplQ 50S ribosomal protein L17 PSEEN0515 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 104781691 Common - hypothetical protein PSEEN2591 63 COG3803 COG3803, Uncharacterized protein conserved in bacteria Function unknown 104779629 Common - hypothetical protein PSEEN0350 120 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104784410 Common - hypothetical protein PSEEN5516 8 None None None 104782981 Common - hypothetical protein PSEEN3994 63 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104779551 Common - ABC transporter, periplasmic binding protein PSEEN0269 107 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 104783706 Common hasE heme acquisition transporter, membrane fusion protein HasE PSEEN4763 122 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104781853 Common - transcriptional regulator, AraC family PSEEN2772 131 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104780741 Common - transcriptional regulator, LysR family PSEEN1567 178 COG0583 LysR, Transcriptional regulator Transcription 104782496 Common - alginate O-acetylation protein AlgI-2 PSEEN3458 86 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 104782242 Common glcE glycolate oxidase FAD binding subunit PSEEN3187 159 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 104781996 Common - hypothetical protein PSEEN2928 51 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 104784205 Common argA N-acetylglutamate synthase PSEEN5300 199 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 104780536 Common dctA-1 C4-dicarboxylate transporter DctA PSEEN1347 162 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 104779850 Common ribB/A bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein PSEEN0590 225 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 104782841 Common flgF flagellar basal body rod protein FlgF PSEEN3837 120 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 104781590 Common - hypothetical protein PSEEN2480 2 None None None 104779742 Common secE preprotein translocase subunit SecE PSEEN0476 31 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 104782733 Common - hypothetical protein PSEEN3724 3 None None None 104779900 Common - type II/IV secretion system protein D PSEEN0646 139 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 104781735 Common - hypothetical protein PSEEN2644 62 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 104783774 Common - ATP-dependent protease La domain protein PSEEN4834 68 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 104781230 Common ureB urease subunit beta PSEEN2095 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 104783669 Common - iron-sulfur cluster-binding protein, Rieske family PSEEN4723 40 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 104779726 Pathogen - hypothetical protein PSEEN0453 1 None None None 104782800 Common cheY chemotaxis protein CheY PSEEN3795 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104781744 Common - transcriptional regulator, GntR family PSEEN2654 147 COG2186 FadR, Transcriptional regulators Transcription 104780636 Common - glycine betaine-binding protein, ABC type PSEEN1453 69 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 104779722 Common trpC indole-3-glycerol-phosphate synthase PSEEN0449 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 104779616 Common gltB glutamate synthase subunit alpha PSEEN0337 204 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 104783484 Common - transcriptional regulator, AsnC family PSEEN4516 152 COG1522 Lrp, Transcriptional regulators Transcription 104781910 Common - hypothetical protein PSEEN2835 16 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 104781368 Common - hypothetical protein PSEEN2247 12 COG1423 COG1423, ATP-dependent DNA ligase, homolog of eukaryotic ligase III DNA replication, recombination, and repair 104782453 Common dkgB 2,5-diketo-D-gluconate reductase B PSEEN3411 163 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 104781694 Common mhbB fumarylpyruvate hydrolase PSEEN2594 180 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 104783107 Common - pyocin R2_PP, lytic enzyme PSEEN4131 33 COG3179 COG3179, Predicted chitinase General function prediction only 104783114 Common - Mu-like phage assembly protein gp45 PSEEN4139 22 COG4384 COG4384, Mu-like prophage protein gp45 Function unknown 104782763 Common - aerotaxis receptor PSEEN3758 160 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782333 Common - transcriptional regulator, RipR family PSEEN3285 95 COG1737 RpiR, Transcriptional regulators Transcription 104783279 Common - tricarboxylate transport protein TctB PSEEN4306 6 None None None 104781114 Pathogen - hypothetical protein PSEEN1972 1 None None None 104781339 Common rarA recombination factor protein RarA PSEEN2214 241 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 104779735 Common anmK anhydro-N-acetylmuramic acid kinase PSEEN0462 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 104780580 Pathogen - hypothetical protein PSEEN1391 1 None None None 104781800 Common - hypothetical protein PSEEN2713 3 None None None 104779411 Common - Na+/Pi cotransporter PSEEN0101 83 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 104781599 Common - hypothetical protein PSEEN2490 8 None None None 104780633 Common - hypothetical protein PSEEN1450 7 None None None 104783769 Common - hypothetical protein PSEEN4828 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 104781361 Pathogen - hypothetical protein PSEEN2237 1 None None None 104780183 Common - siderophore biosynthesis protein PvcA-like PSEEN0962 11 COG3207 DIT1, Pyoverdine/dityrosine biosynthesis protein Secondary metabolites biosynthesis, transport, and catabolism 104780412 Common bfrB bacterioferritin PSEEN1204 102 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 104780514 Common - acetolactate synthase PSEEN1319 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 104779427 Common - hypothetical protein PSEEN0131 6 None None None 104782119 Common - phosphodiesterase (EAL domain) PSEEN3057 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 104779419 Common - hypothetical protein PSEEN0112 1 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 104782319 Common - sensory box protein PSEEN3270 183 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104779533 Common - sensor histidine kinase PSEEN0249 193 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104782637 Common - hydrolase, alpha/beta fold family PSEEN3614 26 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104784382 Common - hypothetical protein PSEEN5486 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104783662 Common - hypothetical protein PSEEN4716 57 COG2187 COG2187, Uncharacterized protein conserved in bacteria Function unknown 104781829 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase PSEEN2747 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 104779906 Common - hypothetical protein PSEEN0652 1 None None None 104779364 Common - hypothetical protein PSEEN0051 24 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 104780105 Common phrB deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding PSEEN0881 140 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 104780348 Common - hypothetical protein PSEEN1137 61 COG3176 COG3176, Putative hemolysin General function prediction only 104782902 Common - YciI-like protein PSEEN3906 74 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 104780061 Common - hypothetical protein PSEEN0831 7 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 104784062 Common - glutathione S-transferase PSEEN5149 73 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104781262 Common - dioxygenase, beta subunit PSEEN2129 94 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 104781507 Common - transcriptional regulator, GntR family PSEEN2394 215 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104781870 Common paaD phenylacetic acid degradation protein PSEEN2794 54 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 104783782 Common - hypothetical protein PSEEN4844 79 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 104780378 Common pcaC gamma-carboxymuconolactone decarboxylase (CMD) PSEEN1169 91 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 104780905 Common nasT response regulator NasT PSEEN1753 97 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 104780309 Common rpoN RNA polymerase factor sigma-54 PSEEN1093 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 104782329 Common atoQ-2 Arginine/ornithine ABC transporter, permease protein PSEEN3281 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 104783340 Pathogen - hypothetical protein PSEEN4369 1 None None None 104782142 Common - cardiolipin synthase 2 PSEEN3080 138 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 104780035 Common - hypothetical protein PSEEN0802 17 None None None 104779483 Common - sensory box protein PSEEN0195 187 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104783389 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN4420 91 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104784203 Common - glutamine synthetase PSEEN5297 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104784345 Common - lipoprotein PSEEN5449 1 None None None 104780239 Common - transcriptional regulator PSEEN1020 66 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 104781033 Common - hypothetical protein PSEEN1888 94 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 104783866 Common - methyl-accepting chemotaxis transducer PSEEN4937 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780250 Common - hypothetical protein PSEEN1032 93 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 104780734 Common - hypothetical protein PSEEN1560 1 None None None 104782997 Common - aspartyl/Asparaginyl beta-hydroxylase PSEEN4012 36 COG3555 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases Posttranslational modification, protein turnover, chaperones 104782524 Common nuoE NADH dehydrogenase subunit E PSEEN3487 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 104783541 Common - hypothetical protein PSEEN4575 1 None None None 104782632 Common kdpA potassium-transporting ATPase subunit A PSEEN3609 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 104784023 Common - hypothetical protein PSEEN5108 8 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 104780558 Common purN phosphoribosylglycinamide formyltransferase PSEEN1369 219 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 104780994 Common - transcriptional regulator, GntR family PSEEN1847 93 COG1802 GntR, Transcriptional regulators Transcription 104779712 Common - polyamine ABC transporter, periplasmic polyamine-binding protein PSEEN0439 85 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104782625 Pathogen - hypothetical protein PSEEN3602 1 None None None 104780091 Common - hypothetical protein PSEEN0863 67 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104781929 Common - hypothetical protein PSEEN2854 70 COG3391 COG3391, Uncharacterized conserved protein Function unknown 104779544 Common - hypothetical protein PSEEN0260 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 104781132 Common mltE mannitol ABC transporter, periplasmic mannitol-binding protein PSEEN1993 100 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 104781195 Common pncB-2 nicotinate phosphoribosyltransferase PSEEN2058 86 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 104782559 Common - transcriptional regulator, Cro/CI family PSEEN3531 82 COG1396 HipB, Predicted transcriptional regulators Transcription 104783764 Common - lipoprotein, rare lipoprotein A family PSEEN4823 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 104782161 Common - hypothetical protein PSEEN3100 5 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 104781777 Common - hypothetical protein PSEEN2689 67 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104781848 Common - hypothetical protein PSEEN2766 5 None None None 104779747 Common rplL 50S ribosomal protein L7/L12 PSEEN0481 213 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 104782722 Common - thiamine biosynthesis lipoprotein ApbE-like PSEEN3713 135 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 104783422 Common - transcriptional regulator, GntR family PSEEN4453 132 COG2186 FadR, Transcriptional regulators Transcription 104784288 Common - lipase PSEEN5387 137 COG0657 Aes, Esterase/lipase Lipid metabolism 104783474 Common rpsI 30S ribosomal protein S9 PSEEN4506 229 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 104782087 Common - hypothetical protein PSEEN3024 64 COG0393 COG0393, Uncharacterized conserved protein Function unknown 104782203 Common benA benzoate 1,2-dioxygenase alpha subunit PSEEN3143 81 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 104784447 Common yidC putative inner membrane protein translocase component YidC PSEEN5556 213 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 104782340 Common - hypothetical protein PSEEN3292 1 None None None 104784242 Common elbB isoprenoid biosynthesis protein with amidotransferase-like domain PSEEN5340 38 COG3155 ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 104781985 Common - hypothetical protein PSEEN2914 34 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 104780760 Common - hypothetical protein PSEEN1589 1 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 104783404 Common gcvH-2 glycine cleavage system protein H PSEEN4435 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 104781038 Common - 2-dehydropantoate 2-reductase PSEEN1893 95 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 104783951 Common - hypothetical protein PSEEN5032 47 COG2510 COG2510, Predicted membrane protein Function unknown 104781343 Common - hypothetical protein PSEEN2218 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104783627 Common - hypothetical protein PSEEN4672 7 None None None 104780295 Common - hypothetical protein PSEEN1079 55 COG3164 COG3164, Predicted membrane protein Function unknown 104783012 Common - hypothetical protein PSEEN4028 27 None None None 104783620 Pathogen - hypothetical protein PSEEN4665 1 None None None 104782709 Common - VacJ lipoprotein PSEEN3699 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 104781537 Common - DNA-binding response regulator, LuxR family PSEEN2425 212 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104780652 Common mnmC 5-methylaminomethyl-2-thiouridine methyltransferase PSEEN1470 93 COG4121 COG4121, Uncharacterized conserved protein Function unknown 104780244 Common engA GTP-binding protein EngA PSEEN1025 235 COG1160 COG1160, Predicted GTPases General function prediction only 104780563 Common - hypothetical protein PSEEN1374 132 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 104783309 Common - hypothetical protein PSEEN4336 32 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 104783701 Common - multidrug RND transporter, membrane fusion protein PSEEN4758 178 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104783236 Common - hypothetical protein PSEEN4263 218 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 104779996 Pathogen - hypothetical protein PSEEN0759 1 None None None 104781790 Common - hypothetical protein PSEEN2703 63 COG3496 COG3496, Uncharacterized conserved protein Function unknown 104782983 Common - transporter, LysE family PSEEN3997 30 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104781675 Common - hypothetical protein PSEEN2572 2 None None None 104780206 Common - acetyltransferase, GNAT family PSEEN0985 133 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 104781688 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN2588 234 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 104782768 Common - hypothetical protein PSEEN3763 10 COG4575 ElaB, Uncharacterized conserved protein Function unknown 104783548 Common - hypothetical protein PSEEN4582 6 None None None 104780088 Common - hypothetical protein PSEEN0860 122 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 104783817 Common - hypothetical protein PSEEN4881 71 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 104781809 Common - hypothetical protein PSEEN2722 15 None None None 104781851 Common - metallothionein PSEEN2769 6 None None None 104779563 Common - hypothetical protein PSEEN0281 26 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 104783136 Common gpJ pyocin R2_PP, baseplate/tail fiber protein PSEEN4161 37 COG3948 COG3948, Phage-related baseplate assembly protein General function prediction only 104781320 Common - periplasmic polyamine-binding protein PSEEN2192 130 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104779932 Common - transcriptional regulator, LysR family PSEEN0680 105 COG0583 LysR, Transcriptional regulator Transcription 104781378 Common - transcriptional regulator, LysR family PSEEN2258 185 COG0583 LysR, Transcriptional regulator Transcription 104782406 Common - hypothetical protein PSEEN3362 24 COG3952 COG3952, Predicted membrane protein Function unknown 104781559 Common - glycosyl transferase, group 1 family protein PSEEN2449 211 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104782660 Common sucB dihydrolipoamide acetyltransferase PSEEN3639 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 104780102 Common moeB molybdopterin biosynthesis protein MoeB PSEEN0878 222 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 104779669 Common thiI thiamine biosynthesis protein ThiI PSEEN0391 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 104781966 Common - aldehyde dehydrogenase PSEEN2895 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104782770 Common - hypothetical protein PSEEN3765 1 None None None 104780068 Common - transporter, LysE family PSEEN0839 97 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104779945 Common - insecticidal toxin complex protein PSEEN0702 11 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 104782038 Common - multidrug/solvent RND transporter, AcrB-like PSEEN2971 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104782611 Common - TonB-dependent siderophore receptor PSEEN3587 85 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 104780320 Common ttgF toluene-tolerance protein Ttg2F PSEEN1104 50 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 104779980 Common - membrane Zinc metallopeptidase, M50 family PSEEN0740 33 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104783409 Common - hypothetical protein PSEEN4440 31 COG1714 COG1714, Predicted membrane protein/domain Function unknown 104783498 Common - PhoH family protein PSEEN4531 199 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 104782249 Common - deaminase PSEEN3194 205 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 104781799 Common - hypothetical protein PSEEN2712 20 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 104779609 Common - type IV pili biogenesis protein PilM PSEEN0330 42 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 104782779 Common cycH cytochrome c-type biogenesis protein CycH PSEEN3774 74 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 104780504 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN1301 235 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 104779914 Common - methyltransferase PSEEN0660 72 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 104784010 Common hutI imidazolonepropionase PSEEN5094 113 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 104781371 Common fosA Glutathione transferase fosA (Fosfomycin resistance protein) PSEEN2250 19 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104783813 Common - nucleic acid binding protein, PIN domain PSEEN4876 61 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 104779788 Common - hypothetical protein PSEEN0523 48 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 104783966 Common - hypothetical protein PSEEN5048 202 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 104782223 Common - hypothetical protein PSEEN3166 14 None None None 104781456 Common - hypothetical protein PSEEN2341 87 COG3391 COG3391, Uncharacterized conserved protein Function unknown 104781307 Common - surface colonization protein; Filamentous haemagglutinin, N-terminal PSEEN2177 44 None None None 104784315 Common dadA D-amino acid dehydrogenase small subunit PSEEN5416 138 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104784362 Common - metal ion transporter PSEEN5466 214 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 104781516 Common - two-component response regulator PSEEN2403 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104784148 Common ptsP phosphoenolpyruvate-protein phosphotransferase PSEEN5238 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 104779339 Common - Smf protein, DNA processing chain A PSEEN0026 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 104779837 Common - transport protein, MFS superfamily PSEEN0577 53 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783371 Common - hypothetical protein PSEEN4401 4 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 104783982 Common hslU ATP-dependent protease ATP-binding subunit PSEEN5064 212 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 104781423 Common - transporter, LysE family PSEEN2305 90 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104783586 Common - short-chain alcohol dehydrogenase PSEEN4627 26 COG3007 COG3007, Uncharacterized paraquat-inducible protein B Function unknown 104782785 Common ccmC cytochrome c-type biogenesis protein CcmC; heme ABC export system, permease protein PSEEN3780 120 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 104781414 Common ahpC alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides) PSEEN2296 221 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 104784393 Common - hypothetical protein PSEEN5498 1 None None None 104780499 Common - hypothetical protein PSEEN1296 1 None None None 104784002 Common - amino acid ABC transporter, ATP-binding protein PSEEN5085 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 104779469 Common - ferredoxin, 4Fe-4S PSEEN0176 43 COG1146 COG1146, Ferredoxin Energy production and conversion 104781428 Common oprN multidrug efflux RND outer membrane protein OprN PSEEN2311 118 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104781019 Common - lipoprotein PSEEN1874 1 None None None 104779470 Common - hypothetical protein PSEEN0177 19 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 104783577 Common - murein hydrolase transporter LgrA PSEEN4618 24 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 104783140 Pathogen - hypothetical protein PSEEN4165 1 None None None 104784092 Common - transcriptional regulator, AraC family PSEEN5180 129 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104779368 Common - hypothetical protein PSEEN0055 4 None None None 104781152 Common - major facilitator family transporter PSEEN2013 129 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104779552 Common - hypothetical protein PSEEN0270 16 COG4341 COG4341, Predicted HD phosphohydrolase General function prediction only 104782173 Common - Dyp-type peroxidase PSEEN3113 49 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 104780394 Common - hydrolase, alpha/beta fold family PSEEN1185 90 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104781752 Common - D-amino acid dehydrogenase, small subunit family protein PSEEN2664 119 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104779895 Common - hypothetical protein PSEEN0638 1 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 104782007 Common - hypothetical protein PSEEN2940 2 None None None 104783968 Common - chemotaxis protein PSEEN5050 8 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104779429 Common - hypothetical protein PSEEN0133 4 None None None 104780950 Common ccoP-2 cytochrome c oxidase, cbb3-type, subunit III PSEEN1799 86 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 104781659 Common - amine dehydrogenase (light chain) PSEEN2555 12 None None None 104780957 Common ccoN-1 cytochrome c oxidase, cbb3-type, subunit I PSEEN1807 148 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 104779564 Common ilvD dihydroxy-acid dehydratase PSEEN0282 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 104781211 Common xthA exonuclease III PSEEN2076 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 104781858 Common - hypothetical protein PSEEN2777 11 None None None 104783152 Common - phage tail protein PSEEN4177 14 COG4672 gp18, Phage-related protein Function unknown 104783691 Common - hypothetical protein PSEEN4747 1 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 104780986 Common - hypothetical protein PSEEN1839 42 COG0730 COG0730, Predicted permeases General function prediction only 104782051 Common - transporter, MgtC family PSEEN2986 112 COG1285 SapB, Uncharacterized membrane protein Function unknown 104779612 Common - type IV pili biogenesis protein PilQ PSEEN0333 141 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 104783835 Common - transcriptional regulator, AraC family PSEEN4900 78 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104784172 Common - lipoprotein PSEEN5262 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 104783031 Common - amino acid transporter PSEEN4049 185 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104781431 Pathogen - hypothetical protein PSEEN2314 3 None None None 104780099 Common hemA glutamyl-tRNA reductase PSEEN0875 182 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 104780690 Common - zinc-containing alcohol dehydrogenase PSEEN1511 131 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 104782883 Common aotQ-1 arginine/ornithine transport protein AotQ (membrane) PSEEN3886 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 104780877 Common sbcC exonuclease SbcC PSEEN1721 91 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 104779460 Common - hypothetical protein PSEEN0167 70 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 104783947 Common - hypothetical protein PSEEN5028 18 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 104782436 Common - Zinc-dependent carboxypeptidase (M14 family) PSEEN3393 29 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 104783663 Common - hypothetical protein PSEEN4717 4 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 104783345 Common - hypothetical protein PSEEN4374 1 None None None 104780707 Common - transporter, MFS family PSEEN1530 86 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780889 Common - MFS tranporter PSEEN1735 123 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104780619 Common - ABC transporter, permease protein PSEEN1436 152 COG4132 COG4132, ABC-type uncharacterized transport system, permease component General function prediction only 104782751 Common moeA molybdopterin biosynthesis protein, molybdenum incorporation step PSEEN3744 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 104783318 Common - hypothetical protein PSEEN4346 87 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104780581 Common - glutathione peroxidase PSEEN1392 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 104784324 Common - hypothetical protein PSEEN5425 30 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 104783202 Common - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD PSEEN4227 48 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 104781190 Common - malto-oligosyltrehalose trehalohydrolase PSEEN2053 156 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 104780989 Common - transcriptional regulator, LysR family PSEEN1842 144 COG0583 LysR, Transcriptional regulator Transcription 104783754 Common leuS leucyl-tRNA synthetase PSEEN4813 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104784278 Common glnK nitrogen regulatory protein P-II PSEEN5376 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 104783958 Common - hypothetical protein PSEEN5039 1 None None None 104782797 Common cheB chemotaxis-specific methylesterase PSEEN3792 214 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 104781902 Common - Peptidylprolyl isomerase PSEEN2827 11 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 104782076 Common - inositol monophosphatase PSEEN3013 186 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 104783772 Common - 3-methyladenine DNA glycosylase PSEEN4832 56 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 104782236 Common - hypothetical protein PSEEN3180 45 None None None 104781168 Common - transcriptional regulator, GntR family PSEEN2029 139 COG1802 GntR, Transcriptional regulators Transcription 104780902 Common oprF outer membrane protein OprF PSEEN1750 166 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104780028 Common infB translation initiation factor IF-2 PSEEN0795 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 162139701 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PSEEN1908 209 COG1049 AcnB, Aconitase B Energy production and conversion 104780383 Common - hypothetical protein PSEEN1174 36 COG4628 COG4628, Uncharacterized conserved protein Function unknown 104782515 Common - hypothetical protein PSEEN3477 1 None None None 104784058 Common aceE pyruvate dehydrogenase subunit E1 PSEEN5145 129 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 104780160 Pathogen - hypothetical protein PSEEN0938 1 None None None 104783076 Common aspS aspartyl-tRNA synthetase PSEEN4096 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104783284 Common - hypothetical protein PSEEN4311 1 None None None 104782729 Common - transcriptional regulator, TetR family PSEEN3720 96 COG1309 AcrR, Transcriptional regulator Transcription 104782789 Common - hypothetical protein PSEEN3784 18 COG2257 COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB Function unknown 104783257 Common - hypothetical protein PSEEN4284 67 COG3211 PhoX, Predicted phosphatase General function prediction only 104779406 Common - hypothetical protein PSEEN0096 100 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 104781907 Common - biopolymer transport protein ExbD PSEEN2832 45 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 104780219 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase PSEEN0999 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 104784323 Common aldH aldehyde dehydrogenase PSEEN5424 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104784253 Common - uroporphyrin-III C-methyltransferase HemX PSEEN5351 38 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 104780857 Common - hypothetical protein PSEEN1700 13 COG5373 COG5373, Predicted membrane protein Function unknown 104782178 Common - RNA polymerase-binding protein DksA PSEEN3118 134 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 104783418 Common - nucleoid-associated protein NdpA PSEEN4449 31 COG3081 COG3081, Nucleoid-associated protein General function prediction only 104784099 Common sdaA L-serine deaminase I PSEEN5187 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 104781401 Common csrA-2 carbon storage regulator PSEEN2282 82 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 104781221 Common glnS glutaminyl-tRNA synthetase PSEEN2086 246 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 104780076 Common - betaine-aldehyde dehydrogenase PSEEN0848 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104782822 Common fliE flagellar hook-basal body protein FliE PSEEN3817 90 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 104784437 Common atpH F0F1 ATP synthase subunit delta PSEEN5545 184 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 104782391 Common - hypothetical protein PSEEN3346 14 COG3268 COG3268, Uncharacterized conserved protein Function unknown 104779479 Common - arylsulfotransferase PSEEN0187 9 None None None 104781746 Common garD D-galactarate dehydrogenase PSEEN2656 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 104780492 Common - hypothetical protein PSEEN1288 11 COG5626 COG5626, Uncharacterized small conserved protein Function unknown 104781832 Common - outer membrane ferric siderophore receptor PSEEN2750 119 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104783251 Common - type II secretion system protein G PSEEN4278 96 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104782701 Common - hypothetical protein PSEEN3689 1 None None None 104781144 Common - drug resistance transporter, EmrB/QacA family PSEEN2005 193 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783973 Common pilG type IV pili response regulator PilG PSEEN5055 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104784164 Common - lipase PSEEN5254 45 COG2267 PldB, Lysophospholipase Lipid metabolism 104782676 Common etfB electron transfer flavoprotein beta-subunit PSEEN3658 152 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 104784227 Common - membrane fusion protein PSEEN5322 142 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104784136 Common - copper-containing nitrite reductase (NO-forming) PSEEN5226 58 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 104780485 Common - FAD-dependent dehydrogenases PSEEN1280 82 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 104782384 Common - hypothetical protein PSEEN3339 5 COG2259 COG2259, Predicted membrane protein Function unknown 104780682 Common - UDP-N-acetylglucosamine 2-epimerase Wbjd PSEEN1502 152 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 104782480 Common - ABC transporter, ATP-binding protein PSEEN3440 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 104781154 Common - transcriptional regulator, TetR family PSEEN2015 93 COG1309 AcrR, Transcriptional regulator Transcription 104782065 Common - hypothetical protein PSEEN3002 39 COG4291 COG4291, Predicted membrane protein Function unknown 104780277 Common - hypothetical protein PSEEN1061 23 COG3471 COG3471, Predicted periplasmic/secreted protein Function unknown 104779824 Common fdnG Formate dehydrogenase-N major subunit, anaerobic; selenopeptide PSEEN0564 181 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 104780427 Common - electron transport complex protein RnfA PSEEN1219 10 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 104781624 Common - hypothetical protein PSEEN2518 170 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 104780466 Common - outer membrane protein; OmpA family PSEEN1261 171 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104781110 Common pheS phenylalanyl-tRNA synthetase subunit alpha PSEEN1967 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 104780163 Common - hypothetical protein PSEEN0941 1 None None None 104780882 Common - hypothetical protein PSEEN1727 81 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 104780610 Common - hypothetical protein PSEEN1427 18 COG3339 COG3339, Uncharacterized conserved protein Function unknown 104782154 Common hpaG-2 4-hydroxyphenylacetate degradation bifunctional; 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase (5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase) (OPET decarboxylase) PSEEN3093 176 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 104780269 Common dppF dipeptide transporter ATP-binding subunit PSEEN1053 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 104782168 Common - transcriptional regulator, LuxR family PSEEN3108 120 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104782425 Common cti esterified fatty acid cis/trans isomerase PSEEN3381 15 None None None 104784075 Common glyA-2 serine hydroxymethyltransferase PSEEN5162 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 104784219 Common ubiH 2-octaprenyl-6-methoxyphenyl hydroxylase PSEEN5314 126 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 104779442 Common - ABC transporter, ATP-binding protein PSEEN0148 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 104779600 Common - hypothetical protein PSEEN0320 148 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 104782618 Common - hemolysin co-regulated protein 2A PSEEN3595 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104781580 Common - glycosyltransferase PSEEN2470 110 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104780816 Common - FKBP-type peptidyl-prolyl cis-trans isomerase PSEEN1656 149 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 104782126 Common - hypothetical protein PSEEN3064 18 COG5485 COG5485, Predicted ester cyclase General function prediction only 104783129 Common - pyocin R2_PP, tail tube protein GpFII PSEEN4154 29 COG3498 COG3498, Phage tail tube protein FII General function prediction only 104779332 Common tag 3-methyl-adenine DNA glycosylase I, constitutive PSEEN0018 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 162139700 Common - putative transporter PSEEN2131 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 104783429 Common groEL chaperonin GroEL PSEEN4460 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 104783272 Common - hypothetical protein PSEEN4299 42 COG2938 COG2938, Uncharacterized conserved protein Function unknown 104779812 Pathogen - hypothetical protein PSEEN0550 1 None None None 104782294 Common - transporter, LysE family PSEEN3243 118 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104782316 Pathogen - hypothetical protein PSEEN3267 1 None None None 104782829 Common - flagellin FlaG PSEEN3825 34 COG1334 FlaG, Uncharacterized flagellar protein FlaG Cell motility and secretion 104780836 Common - hypothetical protein PSEEN1678 1 None None None 104782602 Pathogen - hypothetical protein PSEEN3577 1 None None None 104782469 Common - FMNH2-dependent alkanesulfonate monooxygenase PSEEN3428 81 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104784194 Common - multidrug RND transporter, membrane fusion protein PSEEN5288 142 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104784156 Common - fumarylacetoacetate (FAA) hydrolase PSEEN5246 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 104783925 Common - peptidase, TldD/PmbA family PSEEN5005 166 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 104783687 Common - hypothetical protein PSEEN4743 17 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 104780803 Common gltX glutamyl-tRNA synthetase PSEEN1639 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 104784210 Common - type II secretion system protein E PSEEN5305 212 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 104783064 Common - radical activating enzyme PSEEN4084 126 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 104783877 Common - hypothetical protein PSEEN4948 216 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 104784016 Common - N-formimino-L-glutamate deiminase PSEEN5100 83 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 104779398 Common kinB alginate biosynthesis sensor protein KinB PSEEN0086 218 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 104779375 Common - hypothetical protein PSEEN0062 14 None None None 104782542 Common - hypothetical protein PSEEN3505 29 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 104779355 Common - hypothetical protein PSEEN0042 2 None None None 104780282 Common - hypothetical protein PSEEN1066 135 COG0679 COG0679, Predicted permeases General function prediction only 104780331 Common - hypothetical protein PSEEN1117 49 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 104780965 Common dsbG disulfide isomerase/thiol-disulfide oxidase PSEEN1816 27 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 104783321 Common - transcriptional regulator, AraC family PSEEN4349 126 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104779841 Common - ABC transporter, ATP binding component PSEEN0581 248 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 104783240 Common - hypothetical protein PSEEN4267 38 COG3313 COG3313, Predicted Fe-S protein General function prediction only 104780583 Common - transcriptional regulator, LysR family PSEEN1395 167 COG0583 LysR, Transcriptional regulator Transcription 104780501 Common - hypothetical protein PSEEN1298 46 COG1289 COG1289, Predicted membrane protein Function unknown 104781632 Pathogen - hypothetical protein PSEEN2526 1 None None None 104782888 Common phhA phenylalanine 4-monooxygenase PSEEN3892 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 104779451 Common - disulfide bond formation protein B1 (Disulfide oxidoreductase 1) PSEEN0158 18 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 104783744 Common thiD phosphomethylpyrimidine kinase PSEEN4802 218 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 104781544 Common cobN cobaltochelatase PSEEN2433 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 104781270 Common - 2'-5' RNA ligase PSEEN2137 20 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 104782042 Common qhnDH quinohemoprotein amine dehydrogenase gamma subunit PSEEN2975 5 None None None 104782264 Common gloA lactoylglutathione lyase PSEEN3212 119 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104781253 Common metY O-acetylhomoserine aminocarboxypropyltransferase PSEEN2118 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 104780622 Common - transcriptional regulator, GntR family PSEEN1439 121 COG2188 PhnF, Transcriptional regulators Transcription 104780490 Common livH branched-chain amino acid ABC transporter, permease protein PSEEN1285 152 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 104783253 Common - type II secretion system protein E PSEEN4280 159 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 104784077 Common - methyl-accepting chemotaxis transducer PSEEN5164 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104783555 Pathogen - hypothetical protein PSEEN4592 1 None None None 104780272 Common dppB dipeptide ABC transporter, permease protein PSEEN1056 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 104782674 Common - hypothetical protein PSEEN3656 8 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104783598 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase PSEEN4639 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 104779954 Pathogen - hypothetical protein PSEEN0711 1 None None None 104782749 Common - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase PSEEN3742 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 104784275 Pathogen - hypothetical protein PSEEN5373 1 None None None 104780364 Common - hypothetical protein PSEEN1153 1 None None None 104781940 Common - Zinc-dependent dehydrogenase PSEEN2868 196 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104782717 Common - lipoprotein releasing system, ATP-binding protein LolD PSEEN3707 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 104780752 Common tpm thiopurine S-methyltransferase PSEEN1581 34 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase Coenzyme metabolism 104779631 Common - hypothetical protein PSEEN0352 2 None None None 104783569 Common maiA maleylacetoacetate isomerase PSEEN4610 108 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104780718 Common - amidotransferase PSEEN1544 155 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 104781087 Pathogen - hypothetical protein PSEEN1944 1 None None None 104783846 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSEEN4913 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 104779881 Common - AMP-dependent synthetase/ligase PSEEN0623 72 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 104783956 Common sahH S-adenosyl-L-homocysteine hydrolase PSEEN5037 178 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 104780156 Common fruA phosphotransferase system FruA, fructose-specific IIBC component PSEEN0934 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 104780228 Common iscR iron-sulfur cluster assembly transcription factor IscR PSEEN1009 115 COG1959 COG1959, Predicted transcriptional regulator Transcription 104779322 Common - metallo-beta-lactamase family protein PSEEN0007 182 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 104780092 Pathogen - hypothetical protein PSEEN0864 1 None None None 104783206 Common - glycosyl transferase PSEEN4231 130 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 104780055 Common ispB octaprenyl-diphosphate synthase PSEEN0824 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 104781797 Common - transcriptional regulator PSEEN2710 153 COG5616 COG5616, Predicted integral membrane protein Function unknown 104779652 Common betB betaine aldehyde dehydrogenase PSEEN0373 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104783092 Common - hypothetical protein PSEEN4116 106 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 104780050 Common - hypothetical protein PSEEN0819 55 COG2862 COG2862, Predicted membrane protein Function unknown 104781311 Common nhaB sodium/proton antiporter PSEEN2182 25 COG3067 NhaB, Na+/H+ antiporter Inorganic ion transport and metabolism 104781235 Common ureG urease accessory protein UreG PSEEN2100 156 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 104782494 Common - hypothetical protein PSEEN3456 7 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 104782561 Common - putative monovalent cation/H+ antiporter subunit A PSEEN3533 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 104784245 Common - hypothetical protein PSEEN5343 27 COG3014 COG3014, Uncharacterized protein conserved in bacteria Function unknown 104780789 Common tmk thymidylate kinase PSEEN1624 226 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 104781099 Common - ribokinase RbsK PSEEN1956 211 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 104783678 Common folK-2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase PSEEN4734 201 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 104779708 Common - hypothetical protein PSEEN0435 6 None None None 104783294 Common - hypothetical protein PSEEN4321 29 None None None 104781724 Common - hypothetical protein PSEEN2632 1 None None None 104780727 Common aprE alkaline protease (aprA) secretion protein aprE PSEEN1553 126 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104781571 Common - lytic transglycosylase PSEEN2461 169 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 104782473 Common - hypothetical protein PSEEN3433 1 None None None 104784038 Common - predicted kinase PSEEN5124 50 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 104780128 Common - hypothetical protein PSEEN0905 61 COG2119 COG2119, Predicted membrane protein Function unknown 104783930 Common - hypothetical protein PSEEN5010 51 COG1289 COG1289, Predicted membrane protein Function unknown 104781007 Common - hypothetical protein PSEEN1860 15 COG4874 COG4874, Uncharacterized protein conserved in bacteria containing a pentein-type domain Function unknown 104781082 Common gnd 6-phosphogluconate dehydrogenase-like protein PSEEN1939 185 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 104783120 Common - phage tail tube protein PSEEN4145 8 None None None 104783457 Common murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) PSEEN4489 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 104780939 Common dnaX DNA polymerase III subunits gamma and tau PSEEN1788 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 104784402 Common - long-chain acyl-CoA thioester hydrolase family protein PSEEN5508 119 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 104783881 Common orn oligoribonuclease PSEEN4954 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 104782740 Common - ABC transporter, ATP-binding protein PSEEN3732 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 104784181 Pathogen - hypothetical protein PSEEN5272 1 None None None 104779476 Common atsK Alkylsulfatase AtsK PSEEN0183 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104784409 Common - hypothetical protein PSEEN5515 61 COG1469 COG1469, Uncharacterized conserved protein Function unknown 104781318 Common - transcriptional regulator, Lys R family PSEEN2190 135 COG0583 LysR, Transcriptional regulator Transcription 104782102 Common - polyamine ABC transporter, permease protein PSEEN3039 202 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 104781083 Common zwf-2 glucose-6-phosphate 1-dehydrogenase PSEEN1940 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 104782871 Common csrA carbon storage regulator PSEEN3873 77 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 104780743 Common - hypothetical protein PSEEN1569 60 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 104782960 Common - 3-oxoacyl-(acyl carrier protein) synthase III PSEEN3967 201 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 104784234 Common ubiD 3-octaprenyl-4-hydroxybenzoate decarboxylase PSEEN5330 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 104779554 Common - hypothetical protein PSEEN0272 8 None None None 104781759 Common sdaC serine transport protein PSEEN2671 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 104783588 Common - peptidylarginine deiminase, PPADH family PSEEN4629 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 104784060 Common - sensory box protein PSEEN5147 182 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104783638 Common pilE type IV pili biogenesis protein PilE PSEEN4684 37 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 104781915 Common - hypothetical protein PSEEN2840 11 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104783821 Common cycA D-alanine/D-serine/glycine permease PSEEN4885 174 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104779923 Common - hypothetical protein PSEEN0670 1 None None None 104782505 Common - glutathione S-transferase PSEEN3467 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104779392 Common - cytochrome c4 PSEEN0080 63 COG2863 COG2863, Cytochrome c553 Energy production and conversion 104782861 Common - hypothetical protein PSEEN3857 1 None None None 104779970 Common - acetyltransferase, GNAT family PSEEN0728 8 COG0456 RimI, Acetyltransferases General function prediction only 104781121 Pathogen - hypothetical protein PSEEN1982 1 None None None 104782225 Common - hypothetical protein PSEEN3168 1 None None None 104782413 Common - hypothetical protein PSEEN3369 11 COG3403 COG3403, Uncharacterized conserved protein Function unknown 104782379 Common - non-ribosomal peptide synthetase PSEEN3332 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104780791 Common - Deoxyribonuclease, TatD family PSEEN1627 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 104783510 Common algJ alginate O-acetylation protein AlgJ precursor PSEEN4544 8 None None None 104782401 Common - hypothetical protein PSEEN3357 3 None None None 104784415 Common hcnB hydrogene cyanide synthase HcnB PSEEN5521 62 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 104780003 Common lldP L-lactate permease PSEEN0768 104 COG1620 LldP, L-lactate permease Energy production and conversion 104782645 Common fabA 3-hydroxydecanoyl-(acyl carrier protein) dehydratase PSEEN3622 83 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 104782924 Common - Type I secretion membrane fusion protein, HlyD PSEEN3929 132 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104780969 Common - regulator, PspA/IM30 family PSEEN1820 37 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 104782370 Common - transcriptional regulator, LysR family PSEEN3323 192 COG0583 LysR, Transcriptional regulator Transcription 104779590 Common - hypothetical protein PSEEN0310 2 None None None 104781090 Common glpT sn-glycerol-3-phosphate transporter PSEEN1947 73 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104782280 Common - peptide synthase PSEEN3229 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783441 Common - Cob(I)yrinic acid a,c-diamide adenosyltransferase PSEEN4473 128 COG2096 COG2096, Uncharacterized conserved protein Function unknown 104783167 Common surE stationary phase survival protein SurE PSEEN4192 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 104784127 Pathogen - hypothetical protein PSEEN5217 1 None None None 104780779 Common - Maf-like protein PSEEN1612 187 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 104782049 Common - transcriptional regulator, MerR family PSEEN2982 100 COG0789 SoxR, Predicted transcriptional regulators Transcription 104781625 Common - GTP cyclohydrolase I PSEEN2519 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 104781244 Common - transmembrane sensor PSEEN2109 37 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104779680 Common - hypothetical protein PSEEN0403 31 COG2944 COG2944, Predicted transcriptional regulator Transcription 104781612 Common pmsC isochorismate synthetase PSEEN2504 222 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781959 Common - enoyl-CoA hydratase PSEEN2888 178 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104783499 Common - polysaccharide deacetylase family protein PSEEN4533 10 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 104781487 Common - transcriptional regulator (GntR family) PSEEN2374 197 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104783492 Common aapJ general amino acid ABC transporter, periplasmic binding protein PSEEN4525 106 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104784226 Common - hypothetical protein PSEEN5321 91 COG2947 COG2947, Uncharacterized conserved protein Function unknown 104783002 Common - allophanate hydrolase subunit 1 PSEEN4017 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 104781095 Common - ribose ABC transporter, periplasmic ribose-binding protein RbsB PSEEN1952 118 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 104779585 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase PSEEN0304 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 104780763 Common fadE acyl-CoA dehydrogenase PSEEN1594 158 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104780808 Common - small heat-shock protein IbpA PSEEN1647 68 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 104784047 Common - TonB-dependent siderophore receptor PSEEN5134 116 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104783502 Common alg8 glycosyl transferase Alg8 PSEEN4536 5 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104779802 Common stk1 Serine-threonine kinase Stk1 PSEEN0537 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 104783777 Common - MaoC-like dehydratase PSEEN4838 87 COG2030 MaoC, Acyl dehydratase Lipid metabolism 104782699 Pathogen - hypothetical protein PSEEN3686 1 None None None 104782396 Common - transcriptional regulator, LysR family PSEEN3352 178 COG0583 LysR, Transcriptional regulator Transcription 104782212 Common - ABC transporter, permease protein PSEEN3154 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 104783603 Common - hypothetical protein PSEEN4645 9 None None None 104780521 Common - transcriptional regulator PSEEN1327 14 None None None 104780037 Common - hypothetical protein PSEEN0804 27 COG2879 COG2879, Uncharacterized small protein Function unknown 104782984 Common - hypothetical protein PSEEN3999 221 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 104783939 Common - lipoprotein PSEEN5020 1 COG3895 COG3895, Predicted periplasmic protein General function prediction only 104781496 Common - endoribonuclease, L-PSP family PSEEN2383 158 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 104779684 Common - hypothetical protein PSEEN0410 119 COG1690 RtcB, Uncharacterized conserved protein Function unknown 104783353 Common - PTS sugar transport system PSEEN4382 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 104781704 Pathogen - hypothetical protein PSEEN2605 1 None None None 104781663 Common - NAD(P)H quinone oxidoreductase PSEEN2559 100 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 104783894 Common - hypothetical protein PSEEN4968 1 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 104781872 Common paaF phenylacetyl-CoA ligase PSEEN2796 124 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 104782062 Common - site-specific recombinase, phage integrase family PSEEN2998 201 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 104781165 Common - sensor histidine kinase/response regulator hybrid PSEEN2026 177 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780329 Common - hypothetical protein PSEEN1115 24 COG3490 COG3490, Uncharacterized protein conserved in bacteria Function unknown 104783375 Common zwf-1 glucose-6-phosphate 1-dehydrogenase PSEEN4405 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 104781604 Common bauC ferric siderophore ABC transporter, permease protein BauC PSEEN2495 35 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 104780433 Common - penicillin amidase PSEEN1226 72 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 104779727 Common - hypothetical protein PSEEN0454 13 None None None 104779968 Common - hydrolase, haloacid dehalogenase-like family PSEEN0726 81 COG0546 Gph, Predicted phosphatases General function prediction only 104783903 Common tolC Type I efflux secretion system outer membrane protein, TolC PSEEN4979 142 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104781561 Common - glycosyl transferase, WecB/TagA/CpsF family PSEEN2451 107 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 104783806 Common cobI precorrin-2 C(20)-methyltransferase PSEEN4869 143 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 104782731 Common - cell division inhibitor-related protein, SulA-like PSEEN3722 11 COG5404 SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation Cell division and chromosome partitioning 104784042 Common - response regulator PSEEN5128 211 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782410 Common - transporter, MFS family PSEEN3366 103 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780759 Common - hypothetical protein PSEEN1588 83 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 104781277 Common - response regulator, LuxR family PSEEN2144 142 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104780445 Common - aldehyde dehydrogenase PSEEN1238 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104781004 Common - amino acid ABC transporter, permease protein PSEEN1857 171 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 104779618 Common hemE uroporphyrinogen decarboxylase PSEEN0339 182 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 104784294 Common - puttaive metal-dependent hydrolase; Amidohydrolase family PSEEN5394 98 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 104782836 Common flgK flagellar hook-associated protein FlgK PSEEN3832 124 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 104782352 Common - hypothetical protein PSEEN3305 41 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 104782812 Common fliL flagellar basal body-associated protein FliL PSEEN3807 23 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 104780400 Common gltJ glutamate/aspartate ABC transporter, permease protein PSEEN1192 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104781973 Common - transcriptional regulator PSEEN2902 41 COG2944 COG2944, Predicted transcriptional regulator Transcription 104781569 Common - type II secretion pathway protein F PSEEN2459 138 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 104783067 Common tolB translocation protein TolB PSEEN4087 156 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 104783922 Common putP major sodium:proline symporter (SSS family) PSEEN4998 181 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 104780922 Pathogen - hypothetical protein PSEEN1770 1 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781964 Common - hypothetical protein PSEEN2893 8 None None None 104782550 Common - Nitrilase PSEEN3513 111 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104779457 Common - hypothetical protein PSEEN0164 11 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104781937 Pathogen - hypothetical protein PSEEN2865 1 None None None 104784114 Common ppk2 polyphosphate kinase 2 PSEEN5203 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 104779695 Common - hypothetical protein PSEEN0422 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 104780453 Common - methyltransferase, CheR-like PSEEN1247 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 104782584 Common - hypothetical protein PSEEN3556 1 None None None 104780552 Common rumA 23S rRNA 5-methyluridine methyltransferase PSEEN1363 200 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 104779571 Common coaD phosphopantetheine adenylyltransferase PSEEN0290 209 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 104783010 Common - hypothetical protein PSEEN4026 46 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 104782824 Common fleS sensory box histidine kinase FleS PSEEN3819 202 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 104783489 Common aapP general amino acid ABC transporter, ATP-binding protein PSEEN4522 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 104783111 Common - hypothetical protein PSEEN4136 15 COG3778 COG3778, Uncharacterized protein conserved in bacteria Function unknown 104783615 Common - hypothetical protein PSEEN4660 3 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 104783655 Common - phosphatidylserine synthase PssA PSEEN4708 134 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 104782486 Common - short chain dehydrogenase PSEEN3446 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783636 Common - hypothetical protein PSEEN4682 1 None None None 104782998 Common cysK cysteine synthase A PSEEN4013 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 104782275 Common pvdA L-ornithine N5-oxygenase PvdA PSEEN3223 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 104782596 Common - hypothetical protein PSEEN3569 32 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 104779943 Common mmsB 3-hydroxyisobutyrate dehydrogenase PSEEN0700 170 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 104783993 Common ubiB 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway PSEEN5075 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 104781619 Pathogen - hypothetical protein PSEEN2513 2 None None None 104779644 Common - chromosome partitioning protein, ParA family PSEEN0365 197 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104782174 Common - transporter, bile acid/Na+ symporter family PSEEN3114 101 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 104781382 Pathogen - hypothetical protein PSEEN2262 1 None None None 104783534 Common - hypothetical protein PSEEN4568 2 None None None 104781010 Common - hypothetical protein PSEEN1865 2 None None None 104779518 Common - hypothetical protein PSEEN0232 14 None None None 104782133 Pathogen - hypothetical protein PSEEN3071 1 None None None 104781188 Common - maltooligosyl trehalose synthase PSEEN2051 59 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 104781345 Common - sulfite reductase, gamma subunit DsrC-like PSEEN2220 55 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 104780974 Common - hypothetical protein PSEEN1825 2 None None None 104779511 Common - thioesterase PSEEN0225 76 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 104781737 Common - hypothetical protein PSEEN2646 146 COG1741 COG1741, Pirin-related protein General function prediction only 104782240 Common - diguanylate cyclase (GGDEF domain) PSEEN3185 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104781289 Common - NAD(P)H dehydrogenase (quinone) PSEEN2157 90 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 104779626 Common - hypothetical protein PSEEN0347 26 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 104783570 Common fah fumarylacetoacetase PSEEN4611 62 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 104784103 Common hisF imidazole glycerol phosphate synthase subunit HisF PSEEN5191 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 104779960 Common - methyl-accepting chemotaxis transducer PSEEN0717 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782752 Common moaB-1 molybdopterin biosynthesis protein B PSEEN3745 189 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 104783482 Common mdeB 2-oxoacid dehydrogenase subunit E1 PSEEN4514 129 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 104780577 Common - glycosidase, family 5 PSEEN1388 9 COG2730 BglC, Endoglucanase Carbohydrate transport and metabolism 104781116 Common - transposase, OrfA PSEEN1974 51 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 104782057 Common - HlyD family secretion protein PSEEN2993 158 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104782034 Common - diguanylate cyclase (GGDEF domain) PSEEN2967 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104782441 Common - type 1 pili subunit CsuA/B protein PSEEN3398 20 COG5430 COG5430, Uncharacterized secreted protein Function unknown 104779408 Common - ABC transporter, permease protein PSEEN0098 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 104784421 Common - polyketide synthase PSEEN5528 67 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104779848 Common ribD Riboflavin biosynthesis protein RibD PSEEN0588 225 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 104780121 Common - hypothetical protein PSEEN0897 1 None None None 104779493 Common - amino acid ABC transporter, permease protein PSEEN0206 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104779362 Common - transferase PSEEN0049 187 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 104779384 Common znuC Zinc ABC transporter, ATP-binding protein PSEEN0071 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 104783044 Common - beta-lactamase-like PSEEN4062 66 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 104784395 Common zwf-3 glucose-6-phosphate 1-dehydrogenase PSEEN5500 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 104783649 Common rpsT 30S ribosomal protein S20 PSEEN4695 135 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 104781664 Common - Enoyl-CoA hydratase PSEEN2560 147 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104780642 Common - hypothetical protein PSEEN1459 10 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 104783464 Common - lipoprotein LppC PSEEN4496 43 COG3107 LppC, Putative lipoprotein General function prediction only 104780774 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase PSEEN1607 199 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 104780704 Common - hypothetical protein PSEEN1526 2 None None None 104781460 Common - hypothetical protein PSEEN2346 49 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 104783876 Common - hypothetical protein PSEEN4947 206 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 104783366 Common - transcriptional regulator, LysR family PSEEN4396 181 COG0583 LysR, Transcriptional regulator Transcription 104784084 Pathogen - hypothetical protein PSEEN5172 1 None None None 104780264 Common prfC peptide chain release factor 3 PSEEN1047 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 104780361 Common sbcB exonuclease I PSEEN1150 51 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 104780828 Common - hydroxypyruvate reductase PSEEN1669 86 COG2379 GckA, Putative glycerate kinase Carbohydrate transport and metabolism 104781363 Pathogen - hypothetical protein PSEEN2242 1 None None None 104783721 Common - transporter, MFS family PSEEN4778 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781988 Common quiA quinate dehydrogenase (pyrroloquinoline-quinone) PSEEN2918 58 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 104784373 Common - hypothetical protein PSEEN5477 18 COG3495 COG3495, Uncharacterized protein conserved in bacteria Function unknown 104781242 Common - hypothetical protein PSEEN2107 6 None None None 104782195 Common benE benzoate membrane transport protein MFS superfamily) PSEEN3135 59 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 104782974 Common - transcriptional regulator PSEEN3983 21 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 104781685 Common - class II aldolase PSEEN2585 80 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 104779525 Common - molybdopterin oxidoreductase, alpha subunit PSEEN0240 173 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 104780674 Common ihfB integration host factor subunit beta PSEEN1493 204 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 104780593 Common sugE Multidrug efflux pump PSEEN1409 125 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 104782571 Common - RNA polymerase-binding protein DksA PSEEN3543 138 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 104782201 Common benC benzoate 1,2-dioxygenase electron transfer component Includes: Ferredoxin; Ferredoxin--NAD(+) reductase PSEEN3141 141 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 104780649 Common - peptidase M42 PSEEN1467 51 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 104782942 Common - hypothetical protein PSEEN3949 22 COG3514 COG3514, Uncharacterized protein conserved in bacteria Function unknown 104782951 Common - transport protein PSEEN3958 23 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 104781714 Common - esterase PSEEN2616 106 COG0627 COG0627, Predicted esterase General function prediction only 104781894 Common - ABC efflux transporter, permease/ATP-binding protein PSEEN2819 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 104781404 Common modB molybdate ABC transporter, permease protein PSEEN2285 216 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 104783852 Common nadE NAD synthetase PSEEN4920 207 COG0171 NadE, NAD synthase Coenzyme metabolism 104780177 Common cyoA cytochrome o ubiquinol oxidase subunit II PSEEN0956 114 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 104783182 Common lpxB lipid-A-disaccharide synthase PSEEN4207 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 104783172 Common - transcriptional regulator, LysR family PSEEN4197 173 COG0583 LysR, Transcriptional regulator Transcription 104780389 Common - ferredoxin-dependent glutamate synthase. PSEEN1180 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 104782958 Common - hypothetical protein PSEEN3965 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 104779599 Common pilT type IV pili twitching motility protein PilT PSEEN0319 204 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 104783396 Common arcD arginine/ornithine antiporter PSEEN4427 78 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104780134 Common - transcriptional regulator, LuxR family PSEEN0911 96 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 104781017 Common - peptidyl-prolyl cis-trans isomerase D PSEEN1872 170 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 104782806 Common fliR flagellar biosynthesis protein FliR PSEEN3801 126 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 104779578 Common - methyltransferase PSEEN0297 211 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 104779749 Common rpoC DNA-directed RNA polymerase subunit beta' PSEEN0483 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 104782919 Common - hypothetical protein PSEEN3923 7 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 104783267 Common mucB sigma factor algU regulatory protein MucB PSEEN4294 48 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 104780357 Common - hypothetical protein PSEEN1146 62 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 104781278 Pathogen - hypothetical protein PSEEN2146 1 None None None 104780421 Common - hypothetical protein PSEEN1213 1 None None None 104783793 Common aroQ-1 3-dehydroquinate dehydratase PSEEN4855 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 104779877 Common - RNA polymerase sigma factor PSEEN0619 39 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104783361 Common - hypothetical protein PSEEN4391 3 None None None 104779655 Common - hypothetical protein PSEEN0376 1 None None None 104780045 Common - lipoprotein PSEEN0814 5 None None None 104779499 Common tauB taurine transporter ATP-binding subunit PSEEN0212 249 COG4525 TauB, ABC-type taurine transport system, ATPase component Inorganic ion transport and metabolism 104784049 Pathogen - hypothetical protein PSEEN5136 1 None None None 104783857 Common rplI 50S ribosomal protein L9 PSEEN4927 196 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 104782652 Common - hypothetical protein PSEEN3629 26 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 104782111 Common pobA 4-hydroxybenzoate 3-monooxygenase PSEEN3048 82 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 104783797 Common - hypothetical protein PSEEN4860 20 None None None 104780297 Common tldD peptidase U62 TldD PSEEN1081 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 104782894 Common - transcriptional regulator, LysR family PSEEN3898 179 COG0583 LysR, Transcriptional regulator Transcription 104782271 Common - hypothetical protein PSEEN3219 3 None None None 104780949 Common - oxidase with iron-sulfur cluster PSEEN1798 78 COG0348 NapH, Polyferredoxin Energy production and conversion 104782952 Common - acyl carrier protein phosphodiesterase PSEEN3959 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 104781891 Common - transporter of formate/nitrite family PSEEN2816 98 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 104782523 Common nuoC bifunctional NADH:ubiquinone oxidoreductase subunit C/D PSEEN3486 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 104784292 Common - hydrolase, isochorismatase family PSEEN5392 60 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104782895 Common - aromatic amino acid transporter (APC family) PSEEN3899 171 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104779515 Common rimK ribosomal protein S6 modification protein PSEEN0229 150 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 104783722 Common - transporter PSEEN4779 134 COG2252 COG2252, Permeases General function prediction only 104782818 Common fliI flagellum-specific ATP synthase PSEEN3813 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 104779494 Common - cystine transporter subunit PSEEN0207 190 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104782910 Common - hypothetical protein PSEEN3914 21 COG4323 COG4323, Predicted membrane protein Function unknown 104780363 Common purU formyltetrahydrofolate deformylase PSEEN1152 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 104782359 Common - glutaminase PSEEN3312 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 104783019 Common rnd ribonuclease D, processes tRNA PSEEN4035 115 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 104783399 Common arcC carbamate kinase PSEEN4430 65 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 104782548 Common - transcriptional regulator, LysR family PSEEN3511 129 COG0583 LysR, Transcriptional regulator Transcription 104780859 Common - hypothetical protein PSEEN1702 14 COG0388 COG0388, Predicted amidohydrolase General function prediction only 104783850 Common - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN4917 150 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 104781718 Common - excinuclease ABC, UvrA-like PSEEN2620 233 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 104783121 Common - phage sheath protein PSEEN4146 21 COG4386 COG4386, Mu-like prophage tail sheath protein gpL General function prediction only 104779507 Common ssuB aliphatic sulfonates transport ATP-binding subunit PSEEN0221 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 104781984 Common - transcriptional regulator, LysR family PSEEN2913 134 COG0583 LysR, Transcriptional regulator Transcription 104782820 Common fliG flagellar motor switch protein G PSEEN3815 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 104782599 Common - hypothetical protein PSEEN3574 1 None None None 104782556 Common - peptidase, M24 family protein PSEEN3528 172 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 104783286 Common - enoyl-CoA hydratase/isomerase PSEEN4313 132 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104780831 Common gcl glyoxylate carboligase PSEEN1672 221 COG3960 COG3960, Glyoxylate carboligase General function prediction only 104784036 Common - competence protein ComF PSEEN5122 145 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 104779589 Common trmB tRNA (guanine-N(7))-methyltransferase PSEEN0308 176 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 104780722 Common - TonB-dependent ferric siderophore receptor PSEEN1548 91 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104782978 Pathogen - hypothetical protein PSEEN3991 1 None None None 104782985 Common - transcriptional regulator, GntR family PSEEN4000 210 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104783879 Common - transposase PSEEN4950 70 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 104781662 Pathogen - hypothetical protein PSEEN2558 2 None None None 104782946 Common - transporter, MFS family PSEEN3953 15 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783775 Common - hypothetical protein PSEEN4835 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 104780263 Common - transcriptional regulator PSEEN1046 29 None None None 104783368 Common - peptidase, M23/M37 family PSEEN4398 177 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 104784147 Common - hypothetical protein PSEEN5237 48 COG3332 COG3332, Uncharacterized conserved protein Function unknown 104781566 Common - amino acid transporter permease protein PSEEN2456 160 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 104779638 Common - AMP-binding enzyme PSEEN0359 49 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 104781573 Common - transcriptional regulator, LysR family PSEEN2463 188 COG0583 LysR, Transcriptional regulator Transcription 104784398 Common uvrD DNA-dependent helicase II PSEEN5504 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 104782533 Common nuoN NADH dehydrogenase subunit N PSEEN3496 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 104782116 Common - hypothetical protein PSEEN3053 83 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 104783924 Common - probable acyl-CoA dehydrogenase PSEEN5004 146 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104783887 Common rhdA thiosulfate sulfurtransferase (Rhodanese-like protein) PSEEN4960 142 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 104782727 Common - beta-hexosaminidase PSEEN3718 181 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 104780595 Common rdgC recombination associated protein PSEEN1411 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 104783640 Common - hypothetical protein PSEEN4686 1 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 104781557 Common - glycosyl transferase, group 2 family PSEEN2447 15 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 104781466 Common - transcriptional regulator, AraC family PSEEN2352 61 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 104780369 Pathogen - hypothetical protein PSEEN1159 1 None None None 104783870 Common hflK HflK protein PSEEN4941 216 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104780673 Common rpsA 30S ribosomal protein S1 PSEEN1492 223 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 104782862 Common - transcriptional regulator, GntR family PSEEN3858 179 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104781962 Common - hypothetical protein PSEEN2891 12 None None None 104783466 Common gmhA phosphoheptose isomerase PSEEN4498 122 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 104780396 Common - sigma-54 dependent response regulator PSEEN1188 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104781878 Common - hypothetical protein PSEEN2803 37 COG3162 COG3162, Predicted membrane protein Function unknown 104781494 Common - hypothetical protein PSEEN2381 101 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 104783333 Common ttgC multidrug/solvent efflux outer membrane protein TtgC, RND family PSEEN4362 127 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104784285 Common - hypothetical protein PSEEN5384 16 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 104781615 Common psmB isochorismate-pyruvate lyase PSEEN2507 17 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 104783855 Common - hypothetical protein PSEEN4925 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 104782831 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III PSEEN3827 196 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 104780659 Common - hypothetical protein PSEEN1478 38 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 104780290 Common mreB rod shape-determining protein MreB PSEEN1074 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 104783329 Common - drug resistance transporter, EmrB/QacA family PSEEN4357 230 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783363 Common guaB inositol-5-monophosphate dehydrogenase PSEEN4393 241 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 104782973 Common - aminoglycoside N(6')-acetyltransferase PSEEN3982 21 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 104779705 Common - phosphotransferase PSEEN0432 91 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 104783101 Common - hypothetical protein PSEEN4125 1 None None None 104782247 Common - transcriptional regulator, GntR family PSEEN3192 192 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104780341 Common - hypothetical protein PSEEN1129 33 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 104779953 Common - CDP-alcohol phosphatidyltransferase PSEEN0710 31 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 104779813 Pathogen - hypothetical protein PSEEN0551 1 None None None 104780337 Common - nucleoside-diphosphate-sugar epimerases PSEEN1125 203 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104780806 Common - hypothetical protein PSEEN1645 34 COG0824 FcbC, Predicted thioesterase General function prediction only 104780049 Common - hypothetical protein PSEEN0818 2 None None None 104781186 Common - glycosyl hydrolase GlgX PSEEN2049 157 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 104783618 Common - hypothetical protein PSEEN4663 13 None None None 104780131 Common - acyl-CoA synthetase PSEEN0908 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104782272 Common - Membrane dipeptidase PSEEN3220 97 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 104782412 Common - transcriptional regulator, LysR family PSEEN3368 145 COG0583 LysR, Transcriptional regulator Transcription 104783293 Common - sulfate transporter PSEEN4320 153 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 104782846 Common flgB flagellar basal body rod protein FlgB PSEEN3842 89 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 104784427 Common - fatty-acid desaturase PSEEN5534 70 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 104781594 Common - hypothetical protein PSEEN2484 1 None None None 104781324 Common - hypothetical protein PSEEN2197 62 COG2850 COG2850, Uncharacterized conserved protein Function unknown 104783674 Common - hypothetical protein PSEEN4728 4 None None None 104779643 Common - hypothetical protein PSEEN0364 35 None None None 104780044 Common - transcription elongation factor PSEEN0813 51 COG0782 GreA, Transcription elongation factor Transcription 104780185 Common - clavaminate synthase-like; PvcA-like domain PSEEN0964 12 COG3207 DIT1, Pyoverdine/dityrosine biosynthesis protein Secondary metabolites biosynthesis, transport, and catabolism 104781062 Common - serine/threonine protein kinase PSEEN1918 50 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104780402 Common - hypothetical protein PSEEN1194 17 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104780714 Common - membrane sulfatase PSEEN1540 58 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 104784260 Common - hypothetical protein PSEEN5358 8 None None None 104780709 Common - hypothetical protein PSEEN1532 1 None None None 104781012 Common tig trigger factor PSEEN1867 216 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 104779380 Common - D-methionine ABC transporter MetI, membrane protein PSEEN0067 107 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 104784267 Common lysA-2 diaminopimelate decarboxylase PSEEN5365 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 104779379 Common - D-methionine-binding lipoprotein MetQ PSEEN0066 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 104780744 Common - phospho-2-dehydro-3-deoxyheptonate aldolase, class II PSEEN1570 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 104781365 Pathogen - hypothetical protein PSEEN2244 1 None None None 104782968 Common phaJ1 enoyl-CoA hydratase, R-specific PSEEN3977 98 COG2030 MaoC, Acyl dehydratase Lipid metabolism 104781609 Common - non ribosomal peptide synthetase BasB PSEEN2500 59 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104781129 Common mltK ATP-binding component of ABC mannitol transporter PSEEN1990 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 104781975 Common - hypothetical protein PSEEN2904 17 None None None 104782827 Common fliS flagellar protein FliS PSEEN3823 75 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 104784201 Common potF-2 putrescine ABC transporter, periplasmic putrescine-binding protein PSEEN5295 132 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104779965 Common - hypothetical protein PSEEN0722 4 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 104779450 Common - efflux transporter, outer membrane protein PSEEN0156 108 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104781731 Common - hypothetical protein PSEEN2639 7 None None None 104784306 Common - transcriptional regulator, LysR family PSEEN5407 161 COG0583 LysR, Transcriptional regulator Transcription 104784174 Common - hypothetical protein PSEEN5264 53 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 104783745 Common thiE thiamine-phosphate pyrophosphorylase PSEEN4803 193 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 104784295 Common - hydrolase, alpha/beta fold family PSEEN5395 183 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104782627 Common lysA-1 diaminopimelate decarboxylase PSEEN3604 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 104783460 Common ftsL cell division protein FtsL PSEEN4492 21 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 104780356 Common - fumarate hydratase, class I PSEEN1145 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 104783069 Common tolR biopolymer transport protein TolR PSEEN4089 130 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 104780138 Common - outer membrane protein, OmpA family PSEEN0915 160 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104779619 Common - hypothetical protein PSEEN0340 16 COG3111 COG3111, Uncharacterized conserved protein Function unknown 104784211 Common - hypothetical protein PSEEN5306 3 None None None 104781541 Common - cobalt transporter subunit CbtA PSEEN2429 12 COG5446 COG5446, Predicted integral membrane protein Function unknown 104779582 Common ftsE Cell division ATP binding protein FtsE. PSEEN0301 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 104780584 Common - long-chain fatty acid transporter PSEEN1396 85 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 104784232 Common - transporter, ChaC-related PSEEN5327 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 104783083 Common oprD porin D PSEEN4104 10 None None None 104780529 Common - DNA-binding response regulator PSEEN1339 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104780891 Common - transcriptional regulator, GntR family PSEEN1737 118 COG2186 FadR, Transcriptional regulators Transcription 104781066 Common - alkylhydroperoxidase, AhpD domain protein PSEEN1922 66 COG2128 COG2128, Uncharacterized conserved protein Function unknown 104779753 Common tufA elongation factor Tu PSEEN0487 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 104782180 Common - Carbonate dehydratase PSEEN3120 184 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 104782447 Common - hypothetical protein PSEEN3404 1 None None None 104781353 Common - hypothetical protein PSEEN2228 4 None None None 104781995 Common - hypothetical protein PSEEN2927 44 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781913 Common - Curli production assembly/transport component CsgF precursor PSEEN2838 13 None None None 104780169 Common - hypothetical protein PSEEN0947 2 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 104782041 Common - quinohemoprotein amine dehydrogenase 40 kDa subunit PSEEN2974 5 COG3391 COG3391, Uncharacterized conserved protein Function unknown 104782371 Common - hypothetical protein PSEEN3324 18 None None None 104782028 Common - hypothetical protein PSEEN2961 41 COG4125 COG4125, Predicted membrane protein Function unknown 104779516 Common - hypothetical protein PSEEN0230 39 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 104782693 Pathogen - hypothetical protein PSEEN3676 1 None None None 104782730 Common lexA LexA repressor PSEEN3721 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 104780458 Common - transposase PSEEN1252 70 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 104780545 Common - hypothetical protein PSEEN1356 21 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 104782350 Common - hypothetical protein PSEEN3303 46 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 104783193 Common pyrH uridylate kinase PSEEN4218 236 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 104779733 Common argC N-acetyl-gamma-glutamyl-phosphate reductase PSEEN0460 213 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 104781711 Common - hypothetical protein PSEEN2612 3 None None None 104782282 Common - pyoverdine sidechain peptide synthetase PSEEN3231 210 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783622 Common pilC type IV fimbrial assembly protein PSEEN4667 142 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 104780766 Common - ABC transporter, permease protein PSEEN1597 131 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 104780031 Common rpsO 30S ribosomal protein S15 PSEEN0798 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 104782959 Common - hypothetical protein PSEEN3966 16 None None None 104780768 Common - transporter, MotA/TolQ/ExbB proton channel family protein PSEEN1601 154 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 104779521 Common - thioesterase PSEEN0236 26 COG0824 FcbC, Predicted thioesterase General function prediction only 104783561 Common - hemolysin co-regulated protein 1C PSEEN4598 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104783094 Common - hypothetical protein PSEEN4118 97 COG1720 COG1720, Uncharacterized conserved protein Function unknown 104782714 Common - DNA-binding heavy metal response regulator PSEEN3704 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104782018 Common - hypothetical protein PSEEN2951 3 None None None 104783056 Common - hypothetical protein PSEEN4076 63 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 104783235 Common - cytochrome c assembly protein PSEEN4262 70 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 104780335 Common - transporter, LysE family PSEEN1123 75 COG1279 COG1279, Lysine efflux permease General function prediction only 104783629 Common - hypothetical protein PSEEN4674 1 None None None 104783204 Common - hypothetical protein PSEEN4229 84 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 104781684 Common - transcriptional regulator, LysR family PSEEN2584 186 COG0583 LysR, Transcriptional regulator Transcription 104782654 Pathogen - lipoprotein PSEEN3631 1 None None None 104783472 Common petB ubiquinol--cytochrome c reductase, cytochrome b PSEEN4504 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 104782737 Common fadB multifunctional fatty acid oxidation complex subunit alpha PSEEN3728 162 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 104782753 Common - hypothetical protein PSEEN3747 2 None None None 104780650 Common - acetyltransferase, GNAT family PSEEN1468 75 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 104782067 Common - hypothetical protein PSEEN3004 1 None None None 104784129 Common - transcriptional regulator, Cro/CI family PSEEN5219 21 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 104780322 Common hisG ATP phosphoribosyltransferase catalytic subunit PSEEN1106 208 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 104782678 Common - permease, MFS superfamily PSEEN3661 113 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104779926 Common - transcriptional regulator, ArsR family PSEEN0673 35 COG0640 ArsR, Predicted transcriptional regulators Transcription 104781002 Common - amino acid ABC transporter, ATP-binding protein PSEEN1855 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 104781279 Pathogen - hypothetical protein PSEEN2147 1 None None None 104783610 Pathogen - hypothetical protein PSEEN4654 1 None None None 104781313 Common nudC NADH pyrophosphatase PSEEN2184 98 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 104784046 Common - FecR-like transmembrane sensor PSEEN5132 43 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104784271 Common - haloacid dehalogenase-like hydrolase PSEEN5369 89 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 104781123 Pathogen - hypothetical protein PSEEN1984 1 None None None 104782364 Common - cytochrome c PSEEN3317 18 COG3245 CycB, Cytochrome c5 Energy production and conversion 104782297 Common - transcriptional regulator, TetR family PSEEN3246 53 COG1309 AcrR, Transcriptional regulator Transcription 104781868 Common paaB enoyl-CoA hydratase PSEEN2792 178 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 104779396 Common - N-acetylmuramoyl-L-alanine amidase PSEEN0084 110 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 104783448 Common ftsZ cell division protein FtsZ PSEEN4480 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 104780961 Common - periplasmic binding protein PSEEN1812 8 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104782367 Common - hypothetical protein PSEEN3320 12 COG0439 AccC, Biotin carboxylase Lipid metabolism 104781916 Common - secretion protein PSEEN2841 68 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104780700 Common - hypothetical protein PSEEN1522 103 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 104782547 Common - periplasmic polyamine-binding protein PSEEN3510 128 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104779528 Common - hydrolase, haloacid dehalogenase family, subfamily IA, variant 3 PSEEN0244 40 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 104779547 Common oprQ Outer membrane protein OprE3 PSEEN0264 7 None None None 104781349 Common - transporter, xanthine/uracil permease family PSEEN2224 123 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 104782897 Common - hypothetical protein PSEEN3901 145 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 104783565 Common - hypothetical protein PSEEN4605 9 COG3141 COG3141, Uncharacterized protein conserved in bacteria Function unknown 104781276 Common - sensor histidine kinase PSEEN2143 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781727 Common - hypothetical protein PSEEN2635 7 None None None 104779602 Common - hypothetical protein PSEEN0322 25 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 104779795 Common - hypothetical protein PSEEN0530 1 None None None 104783020 Common - transmembrane sulfatase PSEEN4036 64 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 104782036 Common - response regulator PSEEN2969 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104782783 Common ccmE cytochrome c-type biogenesis protein CcmE PSEEN3778 94 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 104783043 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase PSEEN4061 217 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 104783454 Common ftsW cell division protein, stabililzes FtsZ ring PSEEN4486 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 104781720 Common - transporter, MFS family PSEEN2622 172 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104782415 Common - hypothetical protein PSEEN3371 3 None None None 104783909 Common - hypothetical protein PSEEN4985 1 None None None 104782199 Common benK benzoate transport protein (MFS superfamily) PSEEN3139 183 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104782150 Common - Transcriptional regulator, TetR family PSEEN3089 33 COG1309 AcrR, Transcriptional regulator Transcription 104783533 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN4567 111 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104782644 Common - sensor histidine kinase/response regulator (hybrid) PSEEN3621 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782050 Common mvaB hydroxymethylglutaryl-CoA lyase PSEEN2983 101 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 104781866 Common paaY regulatory phaM protein PSEEN2790 194 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 104782376 Common - hypothetical protein PSEEN3329 32 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 104781792 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN2705 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 104782497 Common - alginate O-acetylation protein AlgJ-like PSEEN3459 6 None None None 104783608 Common - hypothetical protein PSEEN4651 38 COG4764 COG4764, Uncharacterized protein conserved in bacteria Function unknown 104779995 Common - hypothetical protein PSEEN0757 6 None None None 104783633 Common - hypothetical protein PSEEN4679 180 COG1496 COG1496, Uncharacterized conserved protein Function unknown 104780029 Common rbfA ribosome-binding factor A PSEEN0796 176 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 104779438 Common - type I toxin efflux ATP-binding protein PSEEN0144 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 104780470 Common adk adenylate kinase PSEEN1265 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 104780245 Common - putative aminotransferase PSEEN1026 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104781486 Common - hypothetical protein PSEEN2373 18 None None None 104779653 Common betI transcriptional regulator BetI PSEEN0374 46 COG1309 AcrR, Transcriptional regulator Transcription 104781292 Common - lipoprotein PSEEN2160 1 None None None 104780647 Common csrA-3 carbon storage regulator PSEEN1464 12 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 104782787 Common ccmA heme ABC export system, ATP-binding protein CcmA PSEEN3782 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 104783902 Common thiC thiamine biosynthesis protein ThiC PSEEN4977 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 104781709 Common - transporter, MFS family PSEEN2610 10 None None None 104782221 Common - transporter, LysE family PSEEN3164 72 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104780502 Common - hypothetical protein PSEEN1299 9 None None None 104780594 Common - transporter; sodium/bile acid transporter family protein PSEEN1410 75 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 104781025 Common - lytic transglycosylase PSEEN1880 74 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 104782218 Common - outer membrane autotransporter PSEEN3161 28 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104782360 Common - transcriptional regulator, AraC family PSEEN3313 79 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783198 Common - hypothetical protein PSEEN4223 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104780310 Common - ABC transporter, ATP-binding protein PSEEN1094 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 104782631 Common kdpB potassium-transporting ATPase B chain PSEEN3608 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 104781840 Common - sensor histidine kinase PSEEN2758 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104779979 Common - hypothetical protein PSEEN0739 29 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104784120 Common - amino acid ABC transporter, permease protein PSEEN5209 174 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 104780784 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSEEN1618 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104780051 Common - hypothetical protein PSEEN0820 1 None None None 104784391 Common accC-2 acetyl-CoA carboxylase PSEEN5496 237 COG0439 AccC, Biotin carboxylase Lipid metabolism 104783686 Common - hypothetical protein PSEEN4742 37 COG1359 COG1359, Uncharacterized conserved protein Function unknown 104779456 Common - ABC transporter, ATP-binding protein PSEEN0163 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 104780213 Common - phosphonate ABC transporter, periplasmic phosphonate-binding protein PSEEN0992 97 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 104782101 Common - polyamine ABC transporter, periplasmic polyamine-binding protein PSEEN3038 63 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104783091 Common - acyltransferase, GNAT family PSEEN4114 51 COG0456 RimI, Acetyltransferases General function prediction only 104780083 Common pth peptidyl-tRNA hydrolase PSEEN0855 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 104780624 Common - hypothetical protein PSEEN1441 1 None None None 104782004 Common - nicotinamide mononucleotide transporter PnuC PSEEN2937 41 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 104784180 Pathogen - hypothetical protein PSEEN5271 1 None None None 104781754 Common - amino acid ABC transporter, permease protein PSEEN2666 173 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 104781736 Common pgm phosphoglucomutase PSEEN2645 228 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 104780157 Common - hypothetical protein PSEEN0935 42 COG3530 COG3530, Uncharacterized protein conserved in bacteria Function unknown 104780110 Common hemH ferrochelatase PSEEN0886 161 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 104783557 Pathogen - hypothetical protein PSEEN4594 2 None None None 104783298 Common - esterase PSEEN4325 37 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 104779366 Common cynT-2 carbonic anhydrase PSEEN0053 154 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 104779717 Common trpE anthranilate synthase component I PSEEN0444 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 104781821 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN2736 62 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779317 Common dnaA chromosomal replication initiation protein PSEEN0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 104782442 Common - type 1 pili subunit CsuA/B protein PSEEN3399 11 COG5430 COG5430, Uncharacterized secreted protein Function unknown 104783322 Common - hypothetical protein PSEEN4350 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 104780952 Common ccoO-2 cytochrome c oxidase, cbb3-type, subunit II PSEEN1801 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 104781081 Common - hypothetical protein PSEEN1938 1 None None None 104779688 Common dnaG DNA primase PSEEN0414 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 104784183 Common - hypothetical protein PSEEN5275 57 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104780932 Pathogen - hypothetical protein PSEEN1781 1 None None None 104783825 Common - branched-chain amino acid ABC transporter, permease protein PSEEN4890 146 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 104779973 Common gudD D-glucarate dehydratase PSEEN0731 62 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 104780605 Common - hypothetical protein PSEEN1421 1 None None None 104780668 Common gyrA DNA gyrase subunit A PSEEN1487 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 104780114 Common - hypothetical protein PSEEN0890 20 None None None 104779353 Common - hypothetical protein PSEEN0040 10 COG4575 ElaB, Uncharacterized conserved protein Function unknown 104782321 Common - RNA polymerase sigma factor PSEEN3272 114 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104782967 Common - hydrolase, alpha/beta fold family PSEEN3976 88 COG2267 PldB, Lysophospholipase Lipid metabolism 104781225 Common ilvE branched-chain amino acid aminotransferase PSEEN2090 198 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 104782995 Common - hypothetical protein PSEEN4010 88 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 104783479 Common trpS tryptophanyl-tRNA synthetase PSEEN4511 220 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104781469 Common - hypothetical protein PSEEN2355 37 None None None 104779474 Common - alkyl sulfate ester ABC transporter AstB, permease protein PSEEN0181 148 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104780285 Common - K+-dependent Na+/Ca+ antiporter PSEEN1069 103 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 104783999 Common - hypothetical protein PSEEN5081 66 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 104780850 Common folC folylpolyglutamate synthase PSEEN1692 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 104779658 Common - metalloendopeptidase, M23/M37 family PSEEN0379 208 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 104781166 Common - sensor histidine kinase/response regulator hybrid PSEEN2027 216 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104780418 Common argG argininosuccinate synthase PSEEN1210 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 104784408 Common - hypothetical protein PSEEN5514 3 None None None 104783357 Common purL phosphoribosylformylglycinamidine synthase PSEEN4386 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 104781965 Common - transcriptional regulator, LysR family PSEEN2894 190 COG0583 LysR, Transcriptional regulator Transcription 104782262 Common - OprD-like porin PSEEN3209 10 None None None 104780556 Common - hypothetical protein PSEEN1367 1 None None None 104780940 Common - hypothetical protein PSEEN1789 177 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 104781254 Common - hypothetical protein PSEEN2119 26 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104780715 Common - hypothetical protein PSEEN1541 1 None None None 104779886 Common - hypothetical protein PSEEN0628 156 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 104782923 Common - multidrug/toxin efflux protein, ATP binding and membrane protein PSEEN3928 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 104780094 Pathogen - hypothetical protein PSEEN0867 1 None None None 104781330 Common icd isocitrate dehydrogenase PSEEN2204 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 104781362 Common - hypothetical protein PSEEN2238 1 None None None 104780757 Common - sensor histidine kinase/response regulator hybrid PSEEN1586 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782854 Common - major facilitator family transporter PSEEN3850 70 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 104779570 Common fdx1 Ferredoxin 4Fe-4S PSEEN0289 115 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 104780661 Common - sensory box protein/GGDEF family protein PSEEN1480 181 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 104784013 Common hutU urocanate hydratase PSEEN5097 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 104782720 Common - glycerophosphoryl diester phosphodiesterase PSEEN3710 158 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 104783954 Common - hypothetical protein PSEEN5035 5 None None None 104783831 Common cbpA curved DNA-binding protein PSEEN4896 234 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 104781546 Common - hypothetical protein PSEEN2435 34 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 104781502 Common - hypothetical protein PSEEN2389 26 COG3503 COG3503, Predicted membrane protein Function unknown 104783716 Common - transcriptional regulator, LuxR family PSEEN4773 40 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 104781443 Common XcpT-2 Probable type II secretion pathway protein G, transport across outer membrane PSEEN2328 86 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104784167 Common - penicillin amidase PSEEN5257 78 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 104781906 Common - hypothetical protein PSEEN2831 3 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 104782575 Common fadAx acetyl-CoA acetyltransferase with thiolase domain FadAx PSEEN3547 173 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104780164 Common - heavy metal sensor histidine kinase PSEEN0942 197 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782257 Common - methylesterase, CheB-like PSEEN3203 150 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 104783976 Common - hypothetical protein PSEEN5058 129 COG1678 COG1678, Putative transcriptional regulator Transcription 104781639 Pathogen - hypothetical protein PSEEN2534 1 None None None 104780970 Common - hypothetical protein PSEEN1821 8 None None None 104781924 Common - response regulator PSEEN2849 210 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782616 Common - hypothetical protein PSEEN3593 71 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104783112 Common - Mu-like phage protein gp47 PSEEN4137 26 COG3299 XkdT, Uncharacterized homolog of phage Mu protein gp47 Function unknown 104781023 Common - methyl-accepting chemotaxis transducer PSEEN1878 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104781521 Common - molybdopterin oxidoreductase, alpha subunit PSEEN2409 171 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 104781105 Common - hypothetical protein PSEEN1962 1 None None None 104781434 Common - hypothetical protein PSEEN2319 3 None None None 104780813 Common leuB 3-isopropylmalate dehydrogenase PSEEN1652 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 104780005 Common smpB SsrA-binding protein PSEEN0770 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 104782091 Common - subtilisin-like serine protease PSEEN3028 117 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 104780840 Common - hypothetical protein PSEEN1682 38 COG3748 COG3748, Predicted membrane protein Function unknown 104782816 Common - anti-sigma F factor antagonist PSEEN3811 12 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 104781435 Pathogen - hypothetical protein PSEEN2320 1 None None None 104784105 Common - hypothetical protein PSEEN5193 11 COG5460 COG5460, Uncharacterized conserved protein Function unknown 104780422 Common nth endonuclease III PSEEN1214 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 104781146 Common - transcriptional regulator, TetR family PSEEN2007 62 COG1309 AcrR, Transcriptional regulator Transcription 104781702 Common - glycine betaine ABC transporter, ATP-binding protein PSEEN2603 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 104783411 Common - hypothetical protein PSEEN4442 70 COG0795 COG0795, Predicted permeases General function prediction only 104781138 Pathogen - hypothetical protein PSEEN1999 1 None None None 104782620 Common - hypothetical protein PSEEN3597 20 COG4551 COG4551, Predicted protein tyrosine phosphatase General function prediction only 104783144 Pathogen - phage protein PSEEN4169 1 None None None 104784082 Common - iron-sulfur cluster-binding protein, Rieske family PSEEN5169 81 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 104784051 Common - heptose kinase WapQ PSEEN5138 9 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 104782204 Pathogen - hypothetical protein PSEEN3145 1 None None None 104779853 Common thiL thiamine monophosphate kinase PSEEN0593 200 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 104782339 Common - acetyltransferase, GNAT family PSEEN3291 97 COG3153 COG3153, Predicted acetyltransferase General function prediction only 104781301 Common - cytochrome c PSEEN2170 68 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 104780370 Common pcaR regulatory protein for pca operon (activator) PSEEN1160 119 COG1414 IclR, Transcriptional regulator Transcription 104782569 Common - hypothetical protein PSEEN3541 1 None None None 104784365 Common phoU transcriptional repressor for high affinity phosphate uptake PSEEN5469 195 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 104782184 Common mexD multidrug efflux pump MexD (RND family) PSEEN3124 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104784196 Common - hypothetical protein PSEEN5290 31 COG4637 COG4637, Predicted ATPase General function prediction only 104780884 Common - hypothetical protein PSEEN1729 94 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 104783162 Common mutS DNA mismatch repair protein PSEEN4187 201 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 104782122 Common - peptidase, U32 family PSEEN3060 140 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 104780010 Common recN DNA repair protein RecN PSEEN0776 198 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 104780640 Common - hypothetical protein PSEEN1457 10 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 104783196 Common map methionine aminopeptidase PSEEN4221 247 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 104782603 Common - hypothetical protein PSEEN3579 6 None None None 104784319 Common - hypothetical protein PSEEN5420 2 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 104782064 Common - NnrS protein PSEEN3000 53 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 104782386 Common - transcriptional regulator, AsnC family PSEEN3341 151 COG1522 Lrp, Transcriptional regulators Transcription 104781406 Common - oxidoreductase, 2-nitropropane dioxygenase family PSEEN2287 125 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 104780993 Common - isochorismatase PSEEN1846 58 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104783914 Common - glycosyl transferase PSEEN4990 207 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104780077 Common - transporter, NCS1 nucleoside transporter family PSEEN0849 36 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 104781163 Common czcA RND divalent metal cation efflux transporter CzcA PSEEN2024 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 104780060 Common - hypothetical protein PSEEN0830 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 104783212 Pathogen - hypothetical protein PSEEN4237 1 None None None 104784135 Pathogen - hypothetical protein PSEEN5225 1 None None None 104784191 Common cysP sulfate/thiosulfate import ABC transporter, periplasmic sulfate-binding protein PSEEN5284 90 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 104782881 Common aotP-1 arginine/ornithine transport ATP-binding protein AotP PSEEN3884 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 104782859 Common bkdB branched-chain alpha-keto acid dehydrogenase subunit E2 PSEEN3855 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 104783154 Common - phage protein PSEEN4179 22 COG5281 COG5281, Phage-related minor tail protein Function unknown 104779597 Common proC pyrroline-5-carboxylate reductase PSEEN0317 216 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 104780835 Common - sulfatase PSEEN1677 68 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 104780464 Common - lipoprotein PSEEN1259 82 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 104782156 Common hpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase (Homoprotocatechuate 2,3-dioxygenase) (HPC dioxygenase) PSEEN3095 23 COG3384 COG3384, Uncharacterized conserved protein Function unknown 104783077 Common - hypothetical protein PSEEN4097 69 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 104782791 Common - hypothetical protein PSEEN3786 9 None None None 104784339 Common - glutamine amidotransferase PSEEN5443 121 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 104783209 Common - hypothetical protein PSEEN4234 5 None None None 104783823 Common - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN4888 117 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 104783350 Common - transcriptional regulator, GntR family PSEEN4379 132 COG2188 PhnF, Transcriptional regulators Transcription 104779365 Common - hypothetical protein PSEEN0052 105 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 104784070 Common purU-1 formyltetrahydrofolate deformylase PSEEN5157 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 104780852 Common - bacteriocin production protein CvpA PSEEN1694 65 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 104780259 Common - glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein PSEEN1042 89 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 104780801 Common - drug resistance transporter, EmrB/QacA family PSEEN1637 177 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104784067 Common - acyltransferase PSEEN5154 29 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104782131 Common - sensor histidine kinase PSEEN3069 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783181 Common rnhB ribonuclease HII PSEEN4206 239 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 104783664 Common - hypothetical protein PSEEN4718 12 COG3070 TfoX, Regulator of competence-specific genes Transcription 104779467 Common - transcriptional regulator, GntR family PSEEN0174 135 COG2188 PhnF, Transcriptional regulators Transcription 104782626 Common lysR DNA-binding transcriptional regulator LysR PSEEN3603 185 COG0583 LysR, Transcriptional regulator Transcription 104780987 Common - endoribonuclease PSEEN1840 182 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 104784018 Common - lipoprotein PSEEN5103 7 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 104781813 Common - hypothetical protein PSEEN2727 3 None None None 104783746 Common hemL glutamate-1-semialdehyde aminotransferase PSEEN4804 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 104781290 Common - transcriptional regulator, TetR family PSEEN2158 15 COG1309 AcrR, Transcriptional regulator Transcription 104781170 Common - oxidoreductase PSEEN2031 101 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104783139 Common - phage protein PSEEN4164 2 None None None 104782090 Common - serine protease PspB PSEEN3027 101 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 104779922 Common - copper-translocating P-type ATPase PSEEN0669 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 104783049 Common - permease (PerM family) PSEEN4068 87 COG0628 PerM, Predicted permease General function prediction only 104782587 Common rnhA ribonuclease H PSEEN3559 181 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 104782512 Common - transcriptional regulator, LysR family PSEEN3474 173 COG0583 LysR, Transcriptional regulator Transcription 104781472 Common - transcriptional regulator, LysR family PSEEN2358 144 COG0583 LysR, Transcriptional regulator Transcription 104784186 Common - biopolymer transport protein ExbB PSEEN5279 145 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 104783060 Common - type I toxin efflux ATP-binding membrane protein PSEEN4080 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 104780863 Common - hypothetical protein PSEEN1706 4 None None None 104780434 Common - hypothetical protein PSEEN1227 33 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 104783702 Common - Acyl-CoA dehydrogenase PSEEN4759 55 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104780343 Common - hypothetical protein PSEEN1131 1 None None None 104780870 Common pepN aminopeptidase N PSEEN1713 160 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 104783750 Common corC magnesium and cobalt efflux protein CorC PSEEN4809 217 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 104782233 Pathogen - hypothetical protein PSEEN3177 1 None None None 104782009 Common - hypothetical protein PSEEN2942 46 COG3271 COG3271, Predicted double-glycine peptidase General function prediction only 104784358 Common ubiA 4-hydroxybenzoate octaprenyltransferase PSEEN5462 190 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 104784326 Common rpmB 50S ribosomal protein L28 PSEEN5427 169 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 104779345 Common - sulfate transporter PSEEN0032 159 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 104781202 Common - hypothetical protein PSEEN2065 1 None None None 104780903 Common - bifunctional serine/threonine-protein kinase and phosphatase PSEEN1751 148 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 104781772 Common - alcohol dehydrogenase PSEEN2684 185 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 104779664 Common - hypothetical protein PSEEN0385 1 None None None 104780687 Common - hypothetical protein PSEEN1508 108 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 104783038 Common mqo-2 malate:quinone oxidoreductase PSEEN4056 56 COG0579 COG0579, Predicted dehydrogenase General function prediction only 104780222 Common secD preprotein translocase subunit SecD PSEEN1002 206 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 104783572 Common - transcriptional regulator, IclR family PSEEN4613 111 COG1414 IclR, Transcriptional regulator Transcription 104782484 Common crcB CrcB homolog PSEEN3444 173 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 104780920 Common zipA cell division protein ZipA PSEEN1768 45 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 104779835 Common - NAD-dependent epimerase/dehydratase family protein PSEEN0575 235 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104782089 Common - purine-cytosine related permease PSEEN3026 58 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 104783978 Common - pyrimidine regulatory protein PyrR PSEEN5060 109 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 104782002 Common - methyl-accepting chemotaxis transducer PSEEN2935 154 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782696 Common - hypothetical protein PSEEN3683 14 None None None 104782704 Common tal transaldolase B PSEEN3692 176 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 104781422 Common - transcriptional regulator, AraC family PSEEN2304 72 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104782055 Common - oxidoreductase, short chain dehydrogenase/reductase family PSEEN2990 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104780632 Common - lipoprotein VacJ-like PSEEN1449 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 104780080 Common - transporter, MFS superfamily PSEEN0852 100 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780022 Common folP dihydropteroate synthase PSEEN0788 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 104782176 Common - hypothetical protein PSEEN3116 24 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104780745 Common - hypothetical protein PSEEN1571 32 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 104783985 Common phaZ poly(3-hydroxyalkanoate) depolymerase PSEEN5067 121 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104781158 Common - hypothetical protein PSEEN2019 3 None None None 104780967 Common dsbD-2 thiol:disulfide interchange protein DsbD PSEEN1818 78 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 104782437 Common csuE type 1 pili protein CsuE PSEEN3394 20 COG5430 COG5430, Uncharacterized secreted protein Function unknown 104782019 Common - hypothetical protein PSEEN2952 1 None None None 104780564 Common - hypothetical protein PSEEN1375 137 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 104782466 Common - acyl-CoA dehydrogenase PSEEN3425 126 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104779565 Common - hypothetical protein PSEEN0283 22 None None None 104782024 Common - hypothetical protein PSEEN2957 56 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 104783770 Common nadD nicotinic acid mononucleotide adenyltransferase PSEEN4829 175 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 104782834 Common - glycosyltransferase PSEEN3830 59 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104780017 Common greA transcription elongation factor GreA PSEEN0783 204 COG0782 GreA, Transcription elongation factor Transcription 104783971 Common pilI Type IV pili signal transduction protein PilI PSEEN5053 29 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104779892 Common - sigma-54 dependent transcriptional regulator PSEEN0635 177 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 104782876 Common aruD succinylglutamic semialdehyde dehydrogenase PSEEN3879 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104781857 Common - multidrug resistance efflux pump, partial with no TM helices (HlyD family) PSEEN2776 141 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104781515 Common - sensor histidine kinase PSEEN2402 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783940 Common - hypothetical protein PSEEN5021 1 None None None 104783883 Common - hypothetical protein PSEEN4956 2 None None None 104781834 Common - hypothetical protein PSEEN2752 16 None None None 104779472 Common - hypothetical protein PSEEN0179 1 None None None 104780382 Common - TonB-dependent receptor PSEEN1173 114 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104780615 Common - alcohol dehydrogenase, zinc-containing PSEEN1432 172 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104781223 Common - sensor histidine kinase PSEEN2088 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780613 Common - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) PSEEN1430 167 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 104783581 Common - hypothetical protein PSEEN4622 27 COG3224 COG3224, Uncharacterized protein conserved in bacteria Function unknown 104779337 Common fmt methionyl-tRNA formyltransferase PSEEN0024 220 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 104782591 Common - ABC transporter, periplamic binding protein PSEEN3564 177 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 104782756 Common - ABC efflux transporter, permease/ATP-binding protein PSEEN3751 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104779905 Common - hypothetical protein PSEEN0651 10 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 104783378 Common oprB-1 glucose-selective porin OprB PSEEN4408 23 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 104781350 Common - hypothetical protein PSEEN2225 129 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 104780292 Common mreD rod shape-determining protein MreD PSEEN1076 61 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 104781326 Common - hypothetical protein PSEEN2199 41 COG2915 COG2915, Uncharacterized protein involved in purine metabolism General function prediction only 104784332 Common argB acetylglutamate kinase PSEEN5435 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 104783551 Pathogen - hypothetical protein PSEEN4585 1 None None None 104782407 Common - hypothetical protein PSEEN3363 69 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 104781585 Common - UDP-N-acetylglucosamine 2-epimerase PSEEN2475 144 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 104783818 Common - hypothetical protein PSEEN4882 1 None None None 104780793 Common - transcriptional regulator, TetR family PSEEN1629 94 COG1309 AcrR, Transcriptional regulator Transcription 104781698 Pathogen - hypothetical protein PSEEN2598 1 None None None 104779771 Common rplR 50S ribosomal protein L18 PSEEN0506 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 104781942 Common - chaperone protein HchA PSEEN2870 35 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 104780242 Common - hypothetical protein PSEEN1023 63 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 104783965 Common bioA adenosylmethionine--8-amino-7-oxononanoate transaminase PSEEN5047 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 104779690 Common gcp O-sialoglycoprotein endopeptidase PSEEN0417 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 104781839 Common - DNA-binding response regulator PSEEN2757 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781647 Common - acetyl-CoA acetyltransferase PSEEN2543 126 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104779390 Common - GTPase EngB PSEEN0078 177 COG0218 COG0218, Predicted GTPase General function prediction only 104781240 Common - hypothetical protein PSEEN2105 1 None None None 104780314 Common - hypothetical protein PSEEN1098 184 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 104781934 Pathogen - hypothetical protein PSEEN2860 1 None None None 104779938 Common - hypothetical protein PSEEN0695 17 None None None 104783346 Common - type II secretion system protein K (XcpX) PSEEN4375 23 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 104782165 Common C1-hpah P-hydroxyphenylacetate hydroxylase C1:reductase component PSEEN3104 126 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104782760 Common - hypothetical protein PSEEN3755 46 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 104779739 Common - pantothenate kinase PSEEN0472 115 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 104779934 Common mmsA-1 methylmalonate-semialdehyde dehydrogenase PSEEN0682 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104779808 Pathogen - hypothetical protein PSEEN0544 1 None None None 104779888 Common - ethanolamine ammonia-lyase small subunit PSEEN0631 54 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 104783259 Common - heavy metal sensor histidine kinase PSEEN4286 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781804 Common - non-ribosomal peptide synthetase PSEEN2717 217 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104781660 Common - hypothetical protein PSEEN2556 12 None None None 104779702 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PSEEN0429 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 104781951 Common - sugar diacid utilization regulator PSEEN2879 41 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 104781127 Common mtlY Xylulokinase PSEEN1988 155 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 104779548 Common - glutamate synthase, large subunit PSEEN0265 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 104779919 Common - transcriptional regulator, AraC family PSEEN0665 69 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783308 Common - hypothetical protein PSEEN4335 9 None None None 104783737 Common - hypothetical protein PSEEN4795 5 None None None 104780136 Common - sensor histidine kinase PSEEN0913 170 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782531 Common nuoL NADH dehydrogenase subunit L PSEEN3494 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 104783889 Common serB phosphoserine phosphatase PSEEN4962 160 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 104780474 Common - carboxyvinyl-carboxyphosphonate phosphorylmutase PSEEN1269 86 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 104781669 Common - glutamine synthetase PSEEN2565 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104783814 Common - hypothetical protein PSEEN4877 31 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 104782451 Common - hypothetical protein PSEEN3409 4 None None None 104781683 Common - Choline dehydrogenase PSEEN2583 98 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 104781740 Common - hypothetical protein PSEEN2649 39 COG3342 COG3342, Uncharacterized conserved protein Function unknown 104782491 Common algD-2 GDP-mannose 6-dehydrogenase PSEEN3453 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 104783174 Common ftsB cell division protein FtsB-like PSEEN4199 64 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 104780868 Common - hypothetical protein PSEEN1711 26 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 104780912 Common - transcriptional regulator, GntR family PSEEN1760 132 COG1802 GntR, Transcriptional regulators Transcription 104783494 Common rhlB ATP-dependent RNA helicase RhlB PSEEN4527 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 104781554 Common - hypothetical protein PSEEN2444 187 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 104784154 Common - hypothetical protein PSEEN5244 11 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 104784281 Pathogen - hypothetical protein PSEEN5379 1 None None None 104783143 Common - phage protein PSEEN4168 4 None None None 104781673 Common - hypothetical protein PSEEN2570 21 COG3602 COG3602, Uncharacterized protein conserved in bacteria Function unknown 104781627 Common - inosine-5'-monophosphate dehydrogenase PSEEN2521 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 104783511 Common algF alginate O-acetyltransferase AlgF PSEEN4545 3 None None None 104784377 Common - transcriptional regulator, LysR family PSEEN5481 178 COG0583 LysR, Transcriptional regulator Transcription 104783017 Common - D-isomer specific 2-hydroxyacid dehydrogenase PSEEN4033 207 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 104783545 Pathogen - hypothetical protein PSEEN4579 1 None None None 104783791 Common ctpL methyl-accepting chemotaxis transducer for inorganic phosphate CtpL PSEEN4853 142 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780958 Common - hypothetical protein PSEEN1809 37 COG3571 COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 104781097 Common - ribose ABC transporter, permease protein RbsC PSEEN1954 116 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 104781630 Common - hydrolase, MutT/nudix family PSEEN2524 9 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104780205 Common - PLP-dependent decarboxylase PSEEN0984 108 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 104782663 Common sdhA succinate dehydrogenase flavoprotein subunit PSEEN3642 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 104779997 Common - hypothetical protein PSEEN0762 1 None None None 104782792 Common cheW purine-binding chemotaxis protein CheW PSEEN3787 140 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104781309 Common - hypothetical protein PSEEN2180 40 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 104779487 Common - D-methionine ABC transporter MetN, ATP-binding protein PSEEN0199 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 104779660 Common - hypothetical protein PSEEN0381 117 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 104779778 Common rpsK 30S ribosomal protein S11 PSEEN0512 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 104782869 Common algZ alginate biosynthesis transcriptional activator PSEEN3868 9 None None None 104780764 Common - glutathione S-transferase PSEEN1595 93 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104779452 Common algQ anti-RNA polymerase sigma 70 factor PSEEN0159 24 COG3160 Rsd, Regulator of sigma D Transcription 104783698 Pathogen - hypothetical protein PSEEN4755 1 None None None 104779541 Common - epimerase PSEEN0257 15 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104782907 Common - nitroreductase PSEEN3911 93 COG0778 NfnB, Nitroreductase Energy production and conversion 104779729 Common - hypothetical protein PSEEN0456 231 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 104780443 Common - hypothetical protein PSEEN1236 30 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 104784343 Common spoT guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase PSEEN5447 208 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 104781131 Common mltF mannitol ABC transporter, permease protein PSEEN1992 170 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 104779401 Common - hypothetical protein PSEEN0090 34 None None None 104779443 Common - ABC transporter, permease protein PSEEN0149 136 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104782313 Common - transcriptional regulator, LysR family PSEEN3263 189 COG0583 LysR, Transcriptional regulator Transcription 104780268 Common - transcriptional regulator, AraC family PSEEN1051 51 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783276 Common - DNA-binding response regulator TctD PSEEN4303 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104783757 Common - hypothetical protein PSEEN4816 1 COG3036 COG3036, Uncharacterized protein conserved in bacteria Function unknown 104780883 Common - hypothetical protein PSEEN1728 1 None None None 104780518 Common - transcriptional regulator, LysR family PSEEN1324 106 COG0583 LysR, Transcriptional regulator Transcription 104781769 Common - hypothetical protein PSEEN2681 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 104781716 Common - regulator protein FrmR PSEEN2618 61 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 104782357 Common - hypothetical protein PSEEN3310 5 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 104781347 Common - hypothetical protein PSEEN2222 28 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 104780931 Pathogen - hypothetical protein PSEEN1780 1 None None None 104783099 Common - hypothetical protein PSEEN4123 33 COG3148 COG3148, Uncharacterized conserved protein Function unknown 104783456 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase PSEEN4488 215 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 104783763 Common dacC D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor) PSEEN4822 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 104780565 Common - hypothetical protein PSEEN1376 2 None None None 104780217 Common - hypothetical protein PSEEN0996 55 COG3781 COG3781, Predicted membrane protein Function unknown 104782931 Common - transcriptional regulator, LysR family PSEEN3936 181 COG0583 LysR, Transcriptional regulator Transcription 104779604 Common priA primosome assembly protein PriA PSEEN0324 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 104784413 Common lpd3 dihydrolipoamide dehydrogenase PSEEN5519 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 104783421 Common - cyanate MFS transporter PSEEN4452 75 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 104779870 Common - hypothetical protein PSEEN0611 3 None None None 104780144 Common - methyl-accepting chemotaxis transducer/sensory box protein PSEEN0922 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782878 Common aruF arginine succinyltransferase PSEEN3881 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 104780678 Common - hypothetical protein PSEEN1498 9 None None None 104784401 Common - sodium/proton antiporter PSEEN5507 208 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 104783487 Common - hypothetical protein PSEEN4520 126 COG0327 COG0327, Uncharacterized conserved protein Function unknown 104781650 Common - DNA-binding protein, AraC family PSEEN2546 76 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104780573 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase PSEEN1384 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 104781499 Common - hypothetical protein PSEEN2386 1 None None None 104779535 Common rmlC dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase PSEEN0251 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 104781056 Common - hypothetical protein PSEEN1912 4 COG3212 COG3212, Predicted membrane protein Function unknown 104783828 Common - acetyltransferase, GNAT family PSEEN4893 122 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 104783653 Common - putative sulfite oxidase subunit YedZ PSEEN4706 73 COG2717 COG2717, Predicted membrane protein Function unknown 104783407 Common gcvT-2 glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent PSEEN4438 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 104784309 Common rep ATP-dependent DNA helicase PSEEN5410 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 104780896 Common - hydrolase, alpha/beta fold family PSEEN1743 18 COG2267 PldB, Lysophospholipase Lipid metabolism 104780513 Common - transporter, formate/nitrite family PSEEN1310 75 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 104781976 Common - hypothetical protein PSEEN2905 4 None None None 104781888 Common - transcriptional regulator, MerR family PSEEN2813 123 COG0789 SoxR, Predicted transcriptional regulators Transcription 104783033 Common - dihydrodipicolinate synthase PSEEN4051 118 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 104783995 Common hisE phosphoribosyl-ATP pyrophosphatase PSEEN5077 176 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 104779801 Common stp1 Serine/threonine phosphoprotein phosphatase Stp1 PSEEN0536 137 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 104782349 Pathogen - hypothetical protein PSEEN3302 1 None None None 104784310 Common xpt xanthine phosphoribosyltransferase PSEEN5411 122 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 104781384 Common - hypothetical protein PSEEN2264 2 None None None 104780530 Common - sensory histidine kinase PSEEN1340 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783932 Common - ornithine cyclodeaminase PSEEN5012 93 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 104780979 Common - acetyltransferase, GNAT family PSEEN1830 4 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 104781199 Common - transcriptional regulator, TetR family PSEEN2062 50 COG1309 AcrR, Transcriptional regulator Transcription 104784122 Common - hypothetical protein PSEEN5211 14 None None None 104782088 Common - hypothetical protein PSEEN3025 85 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 104781374 Common - hypothetical protein PSEEN2253 9 None None None 104781747 Common garP D-galactonate permease PSEEN2657 204 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104781391 Common - predicted inner membrane peptidase PSEEN2271 187 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 104779783 Common bfrA bacterioferritin PSEEN0518 100 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 104779416 Common - hypothetical protein PSEEN0108 2 None None None 104782430 Common mccB 3-methylcrotonyl-CoA carboxylase, beta subunit PSEEN3387 146 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 104782775 Common dacB D-alanyl-D-alanine carboxypeptidase PSEEN3770 100 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 104783606 Common - hypothetical protein PSEEN4649 43 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 104783789 Common - hypothetical protein PSEEN4851 22 COG5345 COG5345, Uncharacterized protein conserved in bacteria Function unknown 104780826 Common - transporter PSEEN1667 10 COG4413 Utp, Urea transporter Amino acid transport and metabolism 104779955 Common - hypothetical protein PSEEN0712 47 COG1598 COG1598, Uncharacterized conserved protein Function unknown 104782144 Common - hypothetical protein PSEEN3082 16 None None None 104783131 Common - phage protein PSEEN4156 1 None None None 104784089 Common - hypothetical protein PSEEN5177 10 None None None 104780304 Common - hypothetical protein PSEEN1088 82 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 104781266 Common - transcriptional regulator, LysR family PSEEN2133 168 COG0583 LysR, Transcriptional regulator Transcription 104781504 Common - hypothetical protein PSEEN2391 4 None None None 104782032 Common - hypothetical protein PSEEN2965 4 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 104779865 Common - lipoprotein PSEEN0605 17 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 104781204 Common - transporter, MFS family PSEEN2067 4 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 104783123 Common - phage protein PSEEN4148 6 None None None 104779424 Common - transcriptional regulator, LysR family PSEEN0118 166 COG0583 LysR, Transcriptional regulator Transcription 104780233 Common hscA chaperone protein HscA PSEEN1014 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 104783219 Common - hypothetical protein PSEEN4245 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 104782903 Common - hypothetical protein PSEEN3907 1 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 104780236 Common ndk nucleoside diphosphate kinase PSEEN1017 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 104781762 Common mdtB multidrug resistance efflux transporter PSEEN2674 184 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104780324 Common hisC histidinol-phosphate aminotransferase PSEEN1108 230 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 104783208 Common - 23S rRNA m1G745 methyltransferase RrmA PSEEN4233 55 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104779861 Common ispA geranyltranstransferase PSEEN0601 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 104780951 Common ccoQ-2 cytochrome c oxidase, cbb3-type, CcoQ subunit PSEEN1800 1 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 104780539 Common - PP-loop ATPase PSEEN1350 164 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 104783579 Common - flavodoxin PSEEN4620 59 COG0716 FldA, Flavodoxins Energy production and conversion 104780104 Common - Oxidoreductase, short-chain dehydrogenase/reductase family PSEEN0880 132 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104784384 Common - acetylpolyamine aminohydrolase PSEEN5488 160 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 104779831 Common - Sodium/alanine symporter PSEEN0571 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 104780527 Common nrdB ribonucleotide-diphosphate reductase subunit beta PSEEN1335 155 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 104780712 Common - divalent heavy-metal cations transporter (ZIP family) PSEEN1537 105 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 104780441 Common - hypothetical protein PSEEN1234 1 None None None 104783759 Common - muramoyltetrapeptide carboxypeptidase PSEEN4818 89 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 104780404 Common glpR glycerol-3-phosphate regulon repressor PSEEN1196 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 104782488 Common uvrC excinuclease ABC subunit C PSEEN3449 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 104782108 Common - non ribosomal peptide synthetase PSEEN3045 223 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104781592 Common - TonB-dependent siderophore receptor PSEEN2482 94 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104782170 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN3110 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783431 Common fxsA FxsA PSEEN4462 12 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 104781993 Common - hypothetical protein PSEEN2925 33 COG3257 GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization General function prediction only 104781005 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN1858 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104782159 Common hpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, with PEP/pyruvate domain PSEEN3098 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 104781864 Common - insecticidal toxin PSEEN2788 31 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 162139698 Common secA preprotein translocase subunit SecA PSEEN4477 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 104783574 Common - oxidoreductase, short chain dehydrogenase/reductase family PSEEN4615 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781014 Common clpX ATP-dependent protease ATP-binding subunit PSEEN1869 230 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 104781681 Pathogen - hypothetical protein PSEEN2579 1 None None None 104784262 Common - hypothetical protein PSEEN5360 1 None None None 104782651 Common htpG heat shock protein 90 PSEEN3628 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 104781073 Common - transcriptional regulator, LysR family PSEEN1930 184 COG0583 LysR, Transcriptional regulator Transcription 104781999 Common - hypothetical protein PSEEN2931 18 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 104784269 Common - hypothetical protein PSEEN5367 55 COG3159 COG3159, Uncharacterized protein conserved in bacteria Function unknown 104781607 Common - ABC transporter, permease/ATP-binding protein PSEEN2498 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104779321 Common - sigma-54 dependent transcriptional regulator PSEEN0005 175 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 104782251 Common - transcriptional regulator, AraC family PSEEN3196 77 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104781233 Common ureJ urease accessory protein UreJ PSEEN2098 4 COG2370 HupE, Hydrogenase/urease accessory protein Posttranslational modification, protein turnover, chaperones 104780081 Common - hypothetical protein PSEEN0853 12 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 104780390 Common rpmE2 50S ribosomal protein L31 type B PSEEN1181 86 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 104784110 Common mutY A/G specific adenine glycosylase PSEEN5199 229 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 104782190 Pathogen - hypothetical protein PSEEN3130 1 None None None 104783082 Common - hypothetical protein PSEEN4102 57 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 104783658 Common ilvI acetolactate synthase 3 catalytic subunit PSEEN4711 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 104781742 Common - hypothetical protein PSEEN2652 1 None None None 104781060 Common - hypothetical protein PSEEN1916 50 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 104779557 Common - FecR-like transmembrane sensor PSEEN0275 48 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104780042 Common - putative ABC transporter ATP-binding protein PSEEN0810 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 104782937 Common - transposase, IS3 family (orf 2) PSEEN3944 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 104783089 Common trkD Kup system potassium uptake protein PSEEN4112 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 104781367 Common - diguanylate cyclase (GGDEF domain) PSEEN2246 180 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104783612 Pathogen - hypothetical protein PSEEN4656 1 None None None 104782000 Common - hypothetical protein PSEEN2932 51 COG3326 COG3326, Predicted membrane protein Function unknown 104779580 Common - zinc-dependent peptidase, M16 family PSEEN0299 196 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 104782216 Common - acetyl-CoA synthetase PSEEN3159 200 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 104784150 Common - hydrolase, haloacid dehalogenase-like family PSEEN5240 72 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 104783647 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase PSEEN4693 211 COG0196 RibF, FAD synthase Coenzyme metabolism 104782735 Common - hypothetical protein PSEEN3726 36 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 104779490 Common - acyl-CoA dehydrogenase PSEEN0202 138 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104780547 Common ldhA D-lactate dehydrogenase, NAD-dependent PSEEN1358 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 104784274 Common - SAM-dependent methyltransferase PSEEN5372 74 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 104783591 Common - peptidylarginine deiminase, PPADH family PSEEN4632 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 104781064 Common - ATPase, AFG1 family PSEEN1920 97 COG1485 COG1485, Predicted ATPase General function prediction only 104781733 Common aroB 3-dehydroquinate synthase PSEEN2641 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 104783667 Common - ABC transporter, permease component PSEEN4721 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 104781787 Common - diguanylate cyclase (GGDEF domain) PSEEN2699 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104783304 Common - sigma-70 factor, ECF subfamily PSEEN4331 85 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104779963 Common - hydrolase; histone deacetylase family protein PSEEN0720 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 104782755 Common - methyl-accepting chemotaxis histidine kinase PSEEN3750 134 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104783226 Common dsbC Thiol:disulfide interchange protein DsbC PSEEN4253 68 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 104782054 Common - sensory box histidine kinase/response regulator (hybrid) PSEEN2989 210 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104783485 Common cysNC bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein PSEEN4517 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 104782508 Common - hypothetical protein PSEEN3470 6 None None None 104779947 Common - hypothetical protein PSEEN0704 36 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 104780750 Common - hypothetical protein PSEEN1579 55 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104779899 Common - Flp pilus assembly protein CpaB PSEEN0645 9 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 104784176 Common - hypothetical protein PSEEN5266 1 None None None 104781911 Common - hypothetical protein PSEEN2836 4 None None None 104781896 Common - hypothetical protein PSEEN2821 2 None None None 104781756 Common - transcriptional regulator, RpiR family PSEEN2668 54 COG1737 RpiR, Transcriptional regulators Transcription 104779327 Common - major facilitator family transporter PSEEN0013 128 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781564 Common sda-3 L-serine deaminase PSEEN2454 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 104780430 Common capB cold shock protein CapB PSEEN1222 174 COG1278 CspC, Cold shock proteins Transcription 104783186 Common - outer membrane protein OmpH-like PSEEN4211 47 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 104784361 Common phoR phosphate regulon sensor protein phoR PSEEN5465 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 104781333 Common clpA ATP-dependent Clp protease, ATP-binding subunit ClpA PSEEN2207 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 104783868 Common hisZ ATP phosphoribosyltransferase regulatory subunit PSEEN4939 192 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 104783191 Common uppS undecaprenyl diphosphate synthase PSEEN4216 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 104783898 Common - hypothetical protein PSEEN4972 26 COG3151 COG3151, Uncharacterized protein conserved in bacteria Function unknown 104782691 Common - hydrolase, MutT/nudix family PSEEN3674 4 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 104779844 Common - thioredoxin PSEEN0584 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 104781478 Common - hypothetical protein PSEEN2364 44 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 104782949 Common - phosphoenolpyruvate mutase PSEEN3956 99 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 104780597 Common - heat-shock protein DnaJ-like PSEEN1413 4 COG3152 COG3152, Predicted membrane protein Function unknown 104782519 Common aceA isocitrate lyase PSEEN3481 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 104780415 Common rnt ribonuclease T PSEEN1207 64 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 104783507 Common algX alginate biosynthesis protein AlgX PSEEN4541 6 None None None 104780755 Common msrB methionine sulfoxide reductase B PSEEN1584 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 104780724 Common aprA Alkaline metalloprotease precursor AprA PSEEN1550 41 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 104781602 Common bauB ferric siderophore ABC transporter, periplasmic siderophore-binding protein bauB PSEEN2493 86 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 104782521 Common nuoA NADH dehydrogenase subunit A PSEEN3484 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 104784300 Common - small-conductance mechanosensitive channel PSEEN5400 191 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104780634 Common - hypothetical protein PSEEN1451 1 None None None 104782712 Common queF 7-cyano-7-deazaguanine reductase PSEEN3702 124 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 104780628 Common minD septum site-determining protein MinD PSEEN1445 142 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 104783291 Pathogen - hypothetical protein PSEEN4318 1 None None None 104783800 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PSEEN4863 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 104779636 Common - hypothetical protein PSEEN0357 40 COG4261 COG4261, Predicted acyltransferase General function prediction only 104783452 Common murC UDP-N-acetylmuramate--L-alanine ligase PSEEN4484 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 104782114 Common - sensory box histidine kinase/response regulator (hybrid) PSEEN3051 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781386 Common - hypothetical protein PSEEN2266 66 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 104779863 Common - alginate biosynthesis protein AlgI-like PSEEN0603 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 104782303 Common - putative oxidoreductase PSEEN3252 214 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 104781041 Common - phosphoadenosine phosphosulfate reductase PSEEN1896 157 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 104779818 Common - hypothetical protein PSEEN0557 5 None None None 104783390 Common - FecR-like transmembrane sensor PSEEN4421 46 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104782146 Common - DNA methylase PSEEN3085 25 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 104784079 Common - hypothetical protein PSEEN5166 2 None None None 104783025 Common - molybdopterin oxidoreductase, alpha subunit PSEEN4042 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 104784080 Common - methyl-accepting chemotaxis transducer PSEEN5167 143 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104784224 Common - 5-formyltetrahydrofolate cyclo-ligase PSEEN5319 175 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 104782916 Common - hypothetical protein PSEEN3920 147 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 104783392 Common - heme oxygenase PSEEN4423 9 COG3230 HemO, Heme oxygenase Inorganic ion transport and metabolism 104782279 Common - lipase PSEEN3228 127 COG0657 Aes, Esterase/lipase Lipid metabolism 104779531 Common - hypothetical protein PSEEN0247 35 None None None 104782971 Common - hypothetical protein PSEEN3980 44 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 104780600 Common - hypothetical protein PSEEN1416 22 None None None 104784283 Common - hypothetical protein PSEEN5382 14 None None None 104780261 Pathogen - hypothetical protein PSEEN1044 1 None None None 104782538 Common pcoA copper resistance protein A precursor PSEEN3501 123 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 104781729 Common - hypothetical protein PSEEN2637 10 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 104780472 Common - hypothetical protein PSEEN1267 1 None None None 104784239 Common hemB delta-aminolevulinic acid dehydratase PSEEN5337 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 104779372 Common - cytochrome c oxidase, subunit III PSEEN0059 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 104782804 Common flhA flagellar biosynthesis protein A PSEEN3799 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 104783335 Common - transcriptional regulator, LysR family PSEEN4364 186 COG0583 LysR, Transcriptional regulator Transcription 104783926 Common - hypothetical protein PSEEN5006 26 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 104783320 Common - hypothetical protein PSEEN4348 3 COG1359 COG1359, Uncharacterized conserved protein Function unknown 104780057 Common rpmA 50S ribosomal protein L27 PSEEN0826 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 104781287 Common - unspecific monooxygenase PSEEN2155 53 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 104781048 Common prpC methylcitrate synthase PSEEN1903 194 COG0372 GltA, Citrate synthase Energy production and conversion 104779703 Common - peptidyl-prolyl cis-trans isomerase A PSEEN0430 166 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 104780312 Common - hypothetical protein PSEEN1096 12 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 104780671 Common - prephenate dehydrogenase, putative/3-phosphoshikimate 1-carboxyvinyltransferase AroA PSEEN1490 231 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 104781613 Common pmsE 2,3-dihydroxybenzoate-AMP ligase PSEEN2505 221 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 104781464 Common - acetyltransferase, GNAT family PSEEN2350 5 COG0456 RimI, Acetyltransferases General function prediction only 104779827 Common fdhE formate dehydrogenase formation protein PSEEN0567 32 COG3058 FdhE, Uncharacterized protein involved in formate dehydrogenase formation Posttranslational modification, protein turnover, chaperones 104781707 Pathogen - hypothetical protein PSEEN2608 1 None None None 104783327 Common - hypothetical protein PSEEN4355 1 None None None 104779855 Common - hypothetical protein PSEEN0595 6 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104782311 Common - transporter, MFS family PSEEN3261 118 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104782808 Common fliP flagellar biosynthesis protein FliP PSEEN3803 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 104779628 Common - Lipoprotein PSEEN0349 3 None None None 104779387 Common thrB homoserine kinase PSEEN0074 62 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 104782553 Common - hypothetical protein PSEEN3516 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 104783289 Common - hypothetical protein PSEEN4316 6 None None None 104783872 Common hfq RNA-binding protein Hfq PSEEN4943 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 104784107 Common hisB imidazoleglycerol-phosphate dehydratase PSEEN5195 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 104783853 Common - azurin PSEEN4921 18 COG3241 COG3241, Azurin Energy production and conversion 104780365 Common - methyl-accepting chemotaxis transducer PSEEN1154 133 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782290 Common - cation ABC transporter, periplasmic cation-binding protein PSEEN3239 155 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 104779723 Common - hypothetical protein PSEEN0450 17 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 104780770 Common lpxK tetraacyldisaccharide 4'-kinase PSEEN1603 124 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 104781960 Common acdA acyl-CoA dehydrogenase PSEEN2889 164 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104779645 Common - hypothetical protein PSEEN0366 30 COG4680 COG4680, Uncharacterized protein conserved in bacteria Function unknown 104782507 Common - outer membrane protein, OmpA family PSEEN3469 166 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104783748 Common phoL phosphate starvation-inducible protein (PhoH-like) PSEEN4807 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 104784009 Common hutG N-formylglutamate amidohydrolase PSEEN5093 58 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 104784425 Common - Cyclopropane-fatty-acyl-phospholipid synthase PSEEN5532 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 104781293 Common - hypothetical protein PSEEN2161 117 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 104784406 Common - hypothetical protein PSEEN5512 12 None None None 104781543 Common cobW cobalamin biosynthesis protein CobW PSEEN2432 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 104780096 Common - hypothetical protein PSEEN0871 11 COG4714 COG4714, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 104780211 Common - tRNA 2-selenouridine synthase PSEEN0990 65 COG2603 COG2603, Predicted ATPase General function prediction only 104779422 Common pntAB pyridine proton-translocating NAD(P) transhydrogenase PSEEN0115 117 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 104781136 Common - ATP-dependent DNA helicase, RecQ-like PSEEN1997 248 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 104782921 Common - RTX toxin PSEEN3925 118 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 104780187 Common - hypothetical protein PSEEN0966 21 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 104782501 Common - hypothetical protein PSEEN3463 2 None None None 104780626 Common rluA ribosomal large subunit pseudouridine synthase A PSEEN1443 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 104782440 Common - type 1 pili subunit CsuA/B protein PSEEN3397 20 COG5430 COG5430, Uncharacterized secreted protein Function unknown 104779972 Common - transport protein, MFS superfamily PSEEN0730 98 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104781876 Common paaJ ring-hydroxylation complex protein 3 PSEEN2801 42 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 104780934 Pathogen - hypothetical protein PSEEN1783 1 None None None 104780786 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II PSEEN1621 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781819 Common - hypothetical protein PSEEN2734 29 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 104782848 Common cheR chemotaxis protein methyltransferase CheR PSEEN3844 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 104780689 Common pyrF orotidine 5'-phosphate decarboxylase PSEEN1510 167 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 104784185 Common - Biopolymer transport protein ExbD/TolR PSEEN5278 107 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 104782747 Common - DNA-binding response regulator, LuxR family PSEEN3740 213 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104783523 Common - HlyD family secretion protein PSEEN4557 116 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104779773 Common rpmD 50S ribosomal protein L30 PSEEN0508 94 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 104779592 Common rdgB putative deoxyribonucleotide triphosphate pyrophosphatase PSEEN0312 224 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 104783837 Common lip Triacylglycerol lipase PSEEN4903 21 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 104780780 Common - hypothetical protein PSEEN1614 41 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 104779719 Common - hypothetical protein PSEEN0446 1 None None None 104782646 Common fabB 3-oxoacyl-(acyl carrier protein) synthase I PSEEN3623 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781467 Common - hypothetical protein PSEEN2353 65 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 104782478 Common - ABC transporter, permease protein PSEEN3438 180 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104783459 Common ftsI penicillin-binding protein PSEEN4491 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 104780942 Common apt adenine phosphoribosyltransferase PSEEN1791 166 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 104784034 Common bioF 8-amino-7-oxononanoate synthase PSEEN5120 190 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 104782060 Common - Na+/H+ antiporter, NahC family PSEEN2996 29 COG2056 COG2056, Predicted permease General function prediction only 104780116 Common - hypothetical protein PSEEN0892 5 None None None 104779884 Common ppa inorganic pyrophosphatase PSEEN0626 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 104779458 Common - transporter, LysE family PSEEN0165 98 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104784443 Common soj chromosome partitioning ATPase ParA PSEEN5552 229 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104782814 Common - hypothetical protein PSEEN3809 17 COG2198 ArcB, FOG: HPt domain Signal transduction mechanisms 104782856 Common bkdR transcriptional regulator BkdR PSEEN3852 158 COG1522 Lrp, Transcriptional regulators Transcription 104781548 Common - sigma-54 dependent transcriptional regulator PSEEN2438 173 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104779798 Common - hypothetical protein PSEEN0533 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 104780142 Common - FMN-linked oxidoreductase, Oye family PSEEN0920 177 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104780621 Common - ABC transporter, periplasmic binding protein PSEEN1438 54 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 104783059 Common - type I toxin efflux outer membrane protein, TolC family PSEEN4079 101 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104782776 Common - phenazine biosynthesis protein, PhzC/F family PSEEN3771 116 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 104784248 Common - hypothetical protein PSEEN5346 4 None None None 104780553 Common - GTP pyrophosphokinase RelA PSEEN1364 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 104783359 Common - cytidine/deoxycytidylate deaminase PSEEN4389 215 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 104779698 Common glpE thiosulfate sulfurtransferase PSEEN0425 122 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 104781256 Pathogen - hypothetical protein PSEEN2122 1 None None None 104780112 Common upp uracil phosphoribosyltransferase PSEEN0888 166 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 104783563 Common - hypothetical protein PSEEN4602 1 None None None 104779676 Common pqqA coenzyme PQQ synthesis protein PqqA PSEEN0398 1 None None None 104783724 Common - transcriptional regulator, LysR family PSEEN4781 141 COG0583 LysR, Transcriptional regulator Transcription 104784169 Common - amino acid ABC transporter, ATP-binding protein PSEEN5259 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 104780287 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B PSEEN1071 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 104779536 Common rmlA dTDP-glucose pyrophosphorylase (glucose-1-phosphate thymidylyltransferase) PSEEN0252 232 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 104782375 Common - thioesterase involved in non-ribosomal peptide biosynthesis PSEEN3328 52 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 104782758 Common pdxB erythronate-4-phosphate dehydrogenase PSEEN3753 224 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 104784097 Common - hypothetical protein PSEEN5185 1 None None None 104780663 Common - short chain dehydrogenase PSEEN1482 186 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781174 Common - monooxygenase, bacterial luciferase family PSEEN2035 128 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104783173 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PSEEN4198 191 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 104782369 Common - transporter, MFS superfamily PSEEN3322 85 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781315 Common - glutamine synthetase PSEEN2186 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104781656 Common - amine dehydrogenase (heavy chain) PSEEN2552 11 None None None 104783015 Common - hypothetical protein PSEEN4031 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 104779686 Common - sensory box proten ; GGDEF domain/EAL domain protein PSEEN0412 211 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104783531 Common - TonB-dependent siderophore receptor PSEEN4565 113 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104781281 Common - non-ribosomal peptide synthetase PSEEN2149 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104782260 Common - response regulator PSEEN3207 153 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104779351 Common trpB tryptophan synthase subunit beta PSEEN0038 226 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 104784117 Pathogen - hypothetical protein PSEEN5206 1 None None None 104783495 Common moaE molybdenum cofactor biosynthesis protein E PSEEN4528 153 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 104780654 Common - hypothetical protein PSEEN1473 23 COG2962 RarD, Predicted permeases General function prediction only 104783096 Common - transcriptional regulator, LysR family PSEEN4120 192 COG0583 LysR, Transcriptional regulator Transcription 104783237 Common - citrate-proton symporter (MFS superfamily) PSEEN4264 137 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780585 Common - hypothetical protein PSEEN1397 1 None None None 104782012 Common - sulfatase PSEEN2945 55 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 104782656 Common braZ branched chain amino acid transporter PSEEN3633 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 104783841 Common - hypothetical protein PSEEN4907 2 None None None 104780846 Common - hypothetical protein PSEEN1688 38 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 104782326 Common - hypothetical protein PSEEN3278 7 COG3668 ParE, Plasmid stabilization system protein General function prediction only 104779692 Common folB dihydroneopterin aldolase PSEEN0419 51 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 104782577 Common fadDx acetyl-coA synthetase/AMP-(fatty) acid ligase FadDx PSEEN3549 219 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 104781227 Common - hypothetical protein PSEEN2092 23 None None None 104781886 Common - hypothetical protein PSEEN2811 85 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 104782299 Common - transporter, MFS family PSEEN3248 200 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104782284 Common - SyrP protein PSEEN3233 22 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104782899 Common - hypothetical protein PSEEN3903 232 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 104783218 Common recJ ss DNA specific exonuclease RecJ PSEEN4244 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 104784053 Common rfaP lipopolysaccharide core biosynthesis; kinase for core heptose of lipopolysaccharide PSEEN5140 10 None None None 104781091 Common - hypothetical protein PSEEN1948 94 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 104783250 Common - type II secretion system protein H PSEEN4277 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104782581 Common phnW 2-aminoethylphosphonate:pyruvate aminotransferase PSEEN3553 159 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 104782545 Common - hypothetical protein PSEEN3508 1 None None None 104782135 Common - hypothetical protein PSEEN3073 4 None None None 104782987 Common - acetyltransferase, GNAT family PSEEN4002 2 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 104780333 Common - diguanylate cyclase/phosphodiesterase (GGDEF and EAL domain) PSEEN1120 172 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104780963 Common pfrI extracytoplasmic-function sigma-70 factor PvdS PSEEN1814 77 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104781274 Common - O-methyltransferase PSEEN2141 21 None None None 104780299 Common pmbA Peptidase U62 TldE PSEEN1083 152 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 104779648 Common - hypothetical protein PSEEN0369 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 104782688 Common - DNA-binding response regulator PSEEN3671 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781575 Common lpsJ acetoacetyl-CoA transferase, beta subunit PSEEN2465 103 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 104781700 Common - glycine betaine ABC transporter, periplasmic binding protein PSEEN2601 44 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 104781125 Pathogen - hypothetical protein PSEEN1986 1 None None None 104783567 Common - hypothetical protein PSEEN4608 36 COG2912 COG2912, Uncharacterized conserved protein Function unknown 104781303 Common - isoquinoline 1-oxidoreductase, alpha subunit PSEEN2172 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 104783624 Common coaE dephospho-CoA kinase PSEEN4669 206 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 104782026 Common adhB alcohol dehydrogenase II ( PSEEN2959 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 104780747 Common - lipoprotein PSEEN1576 1 None None None 104783446 Common - hypothetical protein PSEEN4478 1 COG4701 COG4701, Uncharacterized protein conserved in bacteria Function unknown 104781000 Common - hypothetical protein PSEEN1853 3 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104779744 Common rplK 50S ribosomal protein L11 PSEEN0478 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 104783773 Common - phosphatase, PAP2 family PSEEN4833 123 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 104783516 Pathogen - hypothetical protein PSEEN4550 1 None None None 104782196 Common catA catechol 1,2-dioxygenase PSEEN3136 47 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 104782864 Common - oxidase PSEEN3860 46 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104783478 Common - ATPase PSEEN4510 103 COG1485 COG1485, Predicted ATPase General function prediction only 104782288 Common - hypothetical protein PSEEN3237 10 None None None 104782152 Common hpaA 4-hydroxyphenylacetate catabolism regulatory protein hpaA PSEEN3091 84 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104780607 Common - hypothetical protein PSEEN1424 1 None None None 104779513 Common ompR osmolarity response regulator PSEEN0227 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781484 Common - hypothetical protein PSEEN2371 1 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 104782992 Common - hypothetical protein PSEEN4007 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 104783907 Common - oxidase, FAD-binding PSEEN4983 14 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 104779761 Common rpsC 30S ribosomal protein S3 PSEEN0496 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 104782725 Common - hypothetical protein PSEEN3716 1 None None None 104783741 Common amn AMP nucleosidase PSEEN4799 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 104783844 Common - hypothetical protein PSEEN4910 1 None None None 104782641 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase PSEEN3618 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 104782071 Common - hydrolase, alpha/beta fold family PSEEN3008 31 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104779815 Common - hypothetical protein PSEEN0553 4 None None None 104782928 Common - agmatinase PSEEN3933 160 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 104782417 Common - branched-chain amino acid transport protein, AzlC PSEEN3373 93 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 104783054 Common - amino acid transport protein (APC family) PSEEN4074 179 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104784090 Common - dipeptidase PSEEN5178 101 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 104780191 Common - hypothetical protein PSEEN0970 1 None None None 104781838 Common - hypothetical protein PSEEN2756 16 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 104779807 Common - hypothetical protein PSEEN0543 1 None None None 104781952 Common - transporter, MFS family PSEEN2880 149 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104780804 Common - transcriptional regulator, TetR family PSEEN1643 59 COG1309 AcrR, Transcriptional regulator Transcription 104782773 Common - two-component sensor/response regulator protein PSEEN3768 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780985 Common - hypothetical protein PSEEN1838 10 None None None 104784258 Common - glutathione S-transferase PSEEN5356 48 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104780007 Common - hypothetical protein PSEEN0772 65 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 104781511 Pathogen - hypothetical protein PSEEN2398 1 None None None 104780892 Common - hypothetical protein PSEEN1739 1 None None None 104779940 Common - outer membrane lipoprotein (OmpA domain) PSEEN0697 156 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104780170 Common - hypothetical protein PSEEN0948 6 None None None 104779543 Common - hypothetical protein PSEEN0259 39 None None None 104783583 Common - hypothetical protein PSEEN4624 38 COG3492 COG3492, Uncharacterized protein conserved in bacteria Function unknown 104780982 Common - hypothetical protein PSEEN1833 40 COG2944 COG2944, Predicted transcriptional regulator Transcription 104783715 Common - ferredoxin--NADP+ reductase PSEEN4772 119 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 104782383 Common - hypothetical protein PSEEN3338 6 COG2717 COG2717, Predicted membrane protein Function unknown 104782022 Common - hypothetical protein PSEEN2955 1 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104779465 Common - hypothetical protein PSEEN0172 62 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 104780301 Common fumC fumarate hydratase PSEEN1085 221 COG0114 FumC, Fumarase Energy production and conversion 104779759 Common rpsS 30S ribosomal protein S19 PSEEN0494 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 104781420 Common - sugar efflux transporter PSEEN2302 110 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783684 Common - hypothetical protein PSEEN4740 45 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 104781416 Common - hypothetical protein PSEEN2298 2 None None None 104783216 Common - multidrug RND transporter, membrane fusion protein PSEEN4241 154 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104780198 Common - dehydrogenase, SDR family PSEEN0977 167 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783900 Common - lipoprotein PSEEN4975 14 None None None 104782137 Common - hypothetical protein PSEEN3075 1 None None None 104780954 Common ccoP-1 cytochrome c oxidase, cbb3-type, subunit III PSEEN1804 88 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 104783425 Common - hypothetical protein PSEEN4456 11 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104780849 Common accD acetyl-CoA carboxylase subunit beta PSEEN1691 218 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 104784050 Common - hypothetical protein PSEEN5137 6 None None None 104781021 Common - acyl-CoA thioesterase II PSEEN1876 39 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 104780484 Common - lipoprotein PSEEN1279 22 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 104783247 Common - type II secretion pathway protein L PSEEN4274 1 None None None 104784320 Common - transcriptional regulator, GntR family PSEEN5421 227 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104783917 Common - hypothetical protein PSEEN4993 2 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 104781298 Common - hypothetical protein PSEEN2167 18 None None None 104782231 Common - hypothetical protein PSEEN3175 9 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 104780926 Common - resolvase PSEEN1775 74 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 104780436 Common - hypothetical protein PSEEN1229 85 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 104782955 Common - hydrolase, alpha/beta fold family PSEEN3962 200 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104783423 Common - hypothetical protein PSEEN4454 1 None None None 104779343 Common hemF coproporphyrinogen III oxidase PSEEN0030 112 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 104784145 Common lgt prolipoprotein diacylglyceryl transferase PSEEN5235 209 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 104784396 Pathogen - hypothetical protein PSEEN5502 1 None None None 104784388 Common - acetyltransferase, GNAT family PSEEN5493 71 COG0456 RimI, Acetyltransferases General function prediction only 104783521 Common - transcriptional regulator, LysR family PSEEN4555 95 COG0583 LysR, Transcriptional regulator Transcription 104781184 Common glgB glycogen branching enzyme PSEEN2046 147 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 104781156 Common - transporter, LysE family PSEEN2017 109 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104780524 Common - hypothetical protein PSEEN1330 59 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 104784435 Common atpG F0F1 ATP synthase subunit gamma PSEEN5543 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 104779750 Common rpsL 30S ribosomal protein S12 PSEEN0484 237 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 104783942 Common epd glyceraldehyde 3-phosphate dehydrogenase PSEEN5023 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 104782432 Common - methylcrotonoyl-CoA carboxylase alpha chain PSEEN3389 238 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 104783071 Common - thioesterase PSEEN4091 135 COG0824 FcbC, Predicted thioesterase General function prediction only 104783708 Common hasAp heme acquisition protein HasAp PSEEN4765 2 None None None 104784312 Common - cytochrome c5 PSEEN5413 43 COG3245 CycB, Cytochrome c5 Energy production and conversion 104782439 Common csuC type 1 pili usher pathway chaperone CsuC PSEEN3396 29 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 104781112 Common ihfA integration host factor subunit alpha PSEEN1969 208 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 104780024 Common tpiA triosephosphate isomerase PSEEN0790 221 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 104780380 Common oprB Porin B precursor (Outer membrane protein D1) (Glucose porin) PSEEN1171 21 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 104784124 Common mdtJ multidrug transport protein (SMR superfamily) PSEEN5213 139 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 104779349 Common - hypothetical protein PSEEN0036 17 COG3805 DodA, Aromatic ring-cleaving dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104780240 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase PSEEN1021 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 104782040 Common - acyl-CoA synthetase PSEEN2973 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104782874 Common - hypothetical protein PSEEN3877 1 None None None 104783241 Common - transferase family protein PSEEN4268 205 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 104782445 Common - response regulator PSEEN3402 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104783997 Common tatB sec-independent translocase PSEEN5079 15 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 104784381 Common - hypothetical protein PSEEN5485 1 None None None 104784441 Common atpI F0F1 ATP synthase subunit I PSEEN5550 22 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 104784298 Pathogen - hypothetical protein PSEEN5398 1 None None None 104783005 Common - transcriptional regulator, LysR family PSEEN4020 189 COG0583 LysR, Transcriptional regulator Transcription 104784188 Common cysA sulfate/thiosulfate import ABC transporter, ATP-binding protein PSEEN5281 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 104782461 Common - hypothetical protein PSEEN3420 22 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 104783476 Common - oxidoreductase, aldo/keto reductase family PSEEN4508 193 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 104784230 Common - flagellar basal body-associated protein FliL-like protein PSEEN5325 18 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 104779833 Common - hypothetical protein PSEEN0573 5 COG2267 PldB, Lysophospholipase Lipid metabolism 104781983 Common - transporter, MFS superfamily PSEEN2912 63 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781513 Common - sugar MFS transporter PSEEN2400 105 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104781249 Pathogen - hypothetical protein PSEEN2114 1 None None None 104780231 Common iscA iron-sulfur cluster assembly protein IscA PSEEN1012 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 104782694 Common - hypothetical protein PSEEN3677 6 None None None 104784007 Common dtd D-tyrosyl-tRNA deacylase PSEEN5091 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 104779890 Common - transport protein PSEEN0633 149 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 104780703 Common prmB N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase PSEEN1525 222 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 104782567 Common - hypothetical protein PSEEN3539 1 None None None 104783133 Common - phage protein PSEEN4158 3 None None None 104781518 Common - thioredoxin PSEEN2406 89 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 104779828 Common selA selenocysteine synthase PSEEN0568 70 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 104780824 Common sbp periplasmic thiosulfate-binding protein PSEEN1665 89 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 104781926 Common - cytochrome c PSEEN2851 36 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 104782614 Pathogen - hypothetical protein PSEEN3590 1 None None None 104781500 Common - transcriptional regulator, LysR family PSEEN2387 120 COG0583 LysR, Transcriptional regulator Transcription 104780173 Common - anaerobic nitric oxide reductase transcription regulator PSEEN0951 169 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 104782325 Common - hypothetical protein PSEEN3277 13 COG2259 COG2259, Predicted membrane protein Function unknown 104780388 Common - amino acid permease PSEEN1179 182 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104781107 Common infC translation initiation factor IF-3 PSEEN1964 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 104779740 Common - hypothetical protein PSEEN0473 1 None None None 104780493 Common - hypothetical protein PSEEN1289 4 None None None 104783146 Common - phage protein PSEEN4171 17 COG4733 COG4733, Phage-related protein, tail component Function unknown 104781445 Common - type II secretion system protein L PSEEN2330 2 None None None 104780917 Common - xanthine dehydrogenase, small subunit XhdA PSEEN1765 122 COG4630 XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A Nucleotide transport and metabolism 104782047 Common - hypothetical protein PSEEN2980 1 None None None 104782093 Common - periplamic phosphate-binding protein PSEEN3030 114 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 104781437 Pathogen - hypothetical protein PSEEN2322 1 None None None 104782255 Common - response regulator PSEEN3201 193 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782082 Common - glutathione S-transferase PSEEN3019 92 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104779614 Common aroB 3-dehydroquinate synthase PSEEN0335 208 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 104780818 Common - D-amino acid dehydrogenase, small subunit PSEEN1658 107 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104780079 Common - hydrolase; isochorismatase hydrolase family PSEEN0851 82 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104781526 Common - nucleotidyltransferase/DNA polymerase involved in DNA repair PSEEN2414 71 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 104783035 Common - D-amino acid dehydrogenase, small subunit family protein PSEEN4053 108 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104782977 Pathogen - hypothetical protein PSEEN3990 1 None None None 104781904 Common - hypothetical protein PSEEN2829 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 104780532 Common - hydrolase; probable dienelactone hydrolase PSEEN1342 100 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 104781637 Common - hypothetical protein PSEEN2532 1 None None None 104782965 Common fadD acyl-CoA synthetase PSEEN3973 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104780424 Common - electron transport complex protein RnfG PSEEN1216 58 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 104783553 Pathogen - hypothetical protein PSEEN4588 2 None None None 104784130 Common - hypothetical protein PSEEN5220 14 COG4679 COG4679, Phage-related protein Function unknown 104783156 Common - hypothetical protein PSEEN4181 2 None None None 104782458 Common - hypothetical protein PSEEN3416 37 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 104783681 Common pgi glucose-6-phosphate isomerase PSEEN4737 198 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 104781620 Common - hypothetical protein PSEEN2514 71 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104780180 Common cyoD cytochrome o ubiquinol oxidase, subunit IV PSEEN0959 54 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 104783873 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase PSEEN4944 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 104779414 Common - hypothetical protein PSEEN0106 66 COG3791 COG3791, Uncharacterized conserved protein Function unknown 104781587 Common - oxidoreductase, NAD-binding Ros family PSEEN2477 175 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 104780550 Common - sensor histidine kinase PSEEN1361 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780071 Common - major facilitator family transporter PSEEN0842 46 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 104783194 Common tsf elongation factor Ts PSEEN4219 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 104780854 Common metZ O-succinylhomoserine sulfhydrylase PSEEN1696 209 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 104781134 Common - hypothetical protein PSEEN1995 1 None None None 104783160 Pathogen - hypothetical protein PSEEN4185 1 None None None 104780215 Common - phosphonate ABC transporter, permease protein PSEEN0994 88 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 104782107 Common - non-ribosomal peptide synthetase, terminal component PSEEN3044 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104782206 Common - hypothetical protein PSEEN3147 1 None None None 104782890 Common phhC aromatic amino acid aminotransferase PSEEN3894 74 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104784367 Common pstA phosphate ABC transporter, permease protein PSEEN5471 219 COG4985 COG4985, ABC-type phosphate transport system, auxiliary component Inorganic ion transport and metabolism 104784214 Common gcvT glycine cleavage system aminomethyltransferase T PSEEN5309 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 104780886 Pathogen - hypothetical protein PSEEN1731 1 None None None 104782120 Common rarD-2 chloramphenicol-sensitive protein rarD PSEEN3058 94 COG2962 RarD, Predicted permeases General function prediction only 104780879 Common - hypothetical protein PSEEN1724 9 None None None 104780123 Common - hypothetical protein PSEEN0900 26 None None None 104783916 Common - hypothetical protein PSEEN4992 3 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104783529 Common - hypothetical protein PSEEN4563 39 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 104783413 Common holC DNA polymerase III subunit chi PSEEN4444 62 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 104784193 Common - Acr-type multidrug efflux transporter (RND family) PSEEN5287 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104780991 Common - hypothetical protein PSEEN1844 2 None None None 104782388 Common - acyl-CoA dehydrogenase PSEEN3343 153 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104783222 Common - hypothetical protein PSEEN4248 1 None None None 104780945 Common - hypothetical protein PSEEN1794 30 COG2836 COG2836, Uncharacterized conserved protein Function unknown 104779821 Common - hypothetical protein PSEEN0560 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 104783626 Common - hypothetical protein PSEEN4671 17 COG3235 COG3235, Predicted membrane protein Function unknown 104784026 Common - transcriptional regulator, LysR family PSEEN5111 191 COG0583 LysR, Transcriptional regulator Transcription 104782337 Common - ion mechanosensitive channel PSEEN3289 100 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104784198 Common potH putrescine ABC transporter, permease protein PSEEN5292 195 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 104780000 Pathogen - hypothetical protein PSEEN0765 1 None None None 104784152 Common ilvA-2 threonine dehydratase PSEEN5242 221 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 104780833 Common - transcriptional regulator, TetR family PSEEN1675 110 COG1309 AcrR, Transcriptional regulator Transcription 104781552 Common - transporter PSEEN2442 61 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 104783891 Common - hypothetical protein PSEEN4964 21 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 104780462 Common - lipoprotein PSEEN1257 1 None None None 104783263 Common rnc ribonuclease III PSEEN4290 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 104783594 Common phbA acetyl-CoA acetyltransferase PSEEN4635 177 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104780999 Common - sensory box-containing diguanylate cyclase PSEEN1852 186 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104780159 Common - hypothetical protein PSEEN0937 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104779430 Common - hypothetical protein PSEEN0134 9 None None None 104779574 Common - coniferyl aldehyde dehydrogenase (CALDH) PSEEN0293 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104782138 Common - hypothetical protein PSEEN3076 1 None None None 104782309 Common - kinase PSEEN3259 48 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 104784133 Common - hypothetical protein PSEEN5223 40 None None None 104779594 Common metW methionine biosynthesis protein MetW PSEEN0314 69 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104781172 Common - hydrolase, alpha/beta fold family PSEEN2033 199 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104780645 Pathogen - hypothetical protein PSEEN1462 1 None None None 104783352 Common - Glutamine--fructose-6-phosphate transaminase PSEEN4381 233 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 104781898 Common - curli fiber surface-exposed nucleator CsgB PSEEN2823 18 None None None 104783788 Common - IPP isomerase type 1 PSEEN4850 45 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 104783666 Common - ABC transporter, ATP-binding protein PSEEN4720 249 COG4559 COG4559, ABC-type hemin transport system, ATPase component Inorganic ion transport and metabolism 104784341 Common - transcriptional regulator, LysR family PSEEN5445 114 COG0583 LysR, Transcriptional regulator Transcription 104784352 Common - hypothetical protein PSEEN5456 60 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 104781779 Common - cation-transporting P-type ATPase PSEEN2691 231 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 104780567 Common - cob(I)yrinic acid a,c-diamide adenosyltransferase PSEEN1378 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 104780571 Common - threonine-phosphate decarboxylase PSEEN1382 202 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 104782671 Common - transposase PSEEN3653 70 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 104781846 Common - hypothetical protein PSEEN2764 18 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 104782427 Pathogen - acyl carrier protein PSEEN3383 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781636 Common - RNA polymerase sigma-70 factor, ECF subfamily PSEEN2531 91 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104783650 Common - paraquat-inducible protein B PSEEN4696 56 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 104782825 Common fleQ transcriptional regulator FleQ PSEEN3820 171 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782070 Common - metabolite MFS transporter, MHS family PSEEN3007 133 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 104781823 Common - lipoprotein PSEEN2738 36 None None None 104783079 Common - DNA-binding stress protein, Dps family PSEEN4099 144 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 104784161 Common - hypothetical protein PSEEN5251 52 COG1683 COG1683, Uncharacterized conserved protein Function unknown 104780306 Common - hypothetical protein PSEEN1090 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 104782886 Common - hypothetical protein PSEEN3890 1 None None None 104779986 Common - hypothetical protein PSEEN0746 120 None None None 104780730 Common - transcriptional regulator, LysR family PSEEN1556 184 COG0583 LysR, Transcriptional regulator Transcription 104782909 Common - transcriptional regulator, AraC family PSEEN3913 78 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104779445 Common - hypothetical protein PSEEN0151 73 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 104783231 Common trmD tRNA (guanine-N(1)-)-methyltransferase PSEEN4258 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 104780541 Common - hypothetical protein PSEEN1352 1 COG3308 COG3308, Predicted membrane protein Function unknown 104781641 Pathogen - hypothetical protein PSEEN2537 1 None None None 104781161 Common - cobalt-zinc-cadmium resistance protein CzcC PSEEN2022 65 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783274 Common - hypothetical protein PSEEN4301 47 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 104781043 Common - hypothetical protein PSEEN1898 19 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 104780271 Common dppC dipeptide ABC transporter, permease protein PSEEN1055 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 104780234 Common fdx ferredoxin, 2Fe-2S type, ISC system PSEEN1015 70 COG0633 Fdx, Ferredoxin Energy production and conversion 104783760 Common lipA lipoyl synthase PSEEN4819 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 104783861 Pathogen - hypothetical protein PSEEN4931 1 None None None 104779785 Common - transporter, MFS superfamily PSEEN0520 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104779567 Common - hypothetical protein PSEEN0286 59 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 104780289 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C PSEEN1073 153 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 104782605 Common - transcriptional regulator, LuxR family PSEEN3581 96 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104783386 Common glk glucokinase PSEEN4416 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 104780901 Common sigX RNA polymerase sigma factor SigX PSEEN1749 167 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104782381 Common oprM Outer membrane protein oprM precursor PSEEN3336 132 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104781206 Common - catalase PSEEN2069 102 COG0753 KatE, Catalase Inorganic ion transport and metabolism 104779858 Common - periplasmic cobalamin-binding protein HutB PSEEN0598 65 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 104781770 Pathogen - hypothetical protein PSEEN2682 1 None None None 104783508 Common algL poly(beta-D-mannuronate) lyase PSEEN4542 4 None None None 104780354 Common - protease C56 PSEEN1143 137 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 104783360 Common cumA Mn2+ multicopper oxidase CumA PSEEN4390 128 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 104779671 Common - prolyl oligopeptidase PSEEN0393 109 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 104782629 Common kdpD two-component sensor KdpD sensory kinase PSEEN3606 217 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 104783833 Common - hypothetical protein PSEEN4898 17 COG0628 PerM, Predicted permease General function prediction only 104783952 Common - Na+/H+ antiporter PSEEN5033 148 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 104781767 Pathogen - hypothetical protein PSEEN2679 1 None None None 104782684 Common - hypothetical protein PSEEN3667 3 None None None 104783885 Common - flagellar motor protein MotA PSEEN4958 118 COG1291 MotA, Flagellar motor component Cell motility and secretion 104781978 Common - hypothetical protein PSEEN2907 41 COG0679 COG0679, Predicted permeases General function prediction only 104781738 Common - hypothetical protein PSEEN2647 138 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 104783518 Common - multidrug efflux MFS outer membrane protein PSEEN4552 125 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783343 Common - methyltransferase PSEEN4372 53 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104780692 Pathogen - hypothetical protein PSEEN1513 1 None None None 104784065 Common creB DNA-binding response regulator CreB PSEEN5152 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104782905 Common - hypothetical protein PSEEN3909 1 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 104780977 Common - formate dehydrogenase, alpha subunit PSEEN1828 215 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 104780059 Common proB gamma-glutamyl kinase PSEEN0829 190 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 104779403 Common gltP glutamate/aspartate:proton symporter PSEEN0093 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 104781216 Common - hypothetical protein PSEEN2081 1 None None None 104782310 Common - hypothetical protein PSEEN3260 4 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104780167 Common - multidrug RND transporter, membrane fusion protein (HylD family) PSEEN0945 167 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104780737 Common ohr organic hydroperoxide resistance protein PSEEN1563 96 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 104781971 Common - putrescine ABC transporter, periplasmic putrescine-binding protein PSEEN2900 132 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104780898 Common - metal ion transporter CmaX protein PSEEN1745 60 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 104781030 Common - ABC transporter, ATP-binding protein PSEEN1885 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 104784040 Common - hypothetical protein PSEEN5126 27 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 104781749 Common - glutamine amidopeptidase (class I) PSEEN2659 118 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 104779867 Common - hypothetical protein PSEEN0608 1 None None None 104783558 Pathogen - hypothetical protein PSEEN4595 1 None None None 104784386 Common - transcriptional regulator, GntR family PSEEN5491 180 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104779958 Common - transcriptional regulator, LysR family PSEEN0715 190 COG0583 LysR, Transcriptional regulator Transcription 104783268 Common mucA sigma factor algU negative regulatory protein MucA PSEEN4295 4 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 104781577 Common - kinase; Galactokinase/homoserine kinase family PSEEN2467 54 COG2605 COG2605, Predicted kinase related to galactokinase and mevalonate kinase General function prediction only 104779488 Common - D-methionine-binding periplasmic lipoprotein MetQ PSEEN0200 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 104782343 Common - hypothetical protein PSEEN3295 1 None None None 104783047 Common - glycine cleavage system transcriptional repressor PSEEN4066 26 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 104781535 Common - methyl-accepting chemotaxis transducer/sensory box protein PSEEN2423 162 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104784434 Common atpD F0F1 ATP synthase subunit beta PSEEN5542 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 104780511 Common - hypothetical protein PSEEN1308 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104782635 Common - hypothetical protein PSEEN3612 5 None None None 104780278 Common - sensor histidine kinase PSEEN1062 57 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783974 Common gshB glutathione synthetase PSEEN5056 119 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 104780202 Common - oxidase PSEEN0981 52 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104782420 Common - hypothetical protein PSEEN3376 1 None None None 104781268 Common - carboxymuconolactone decarboxylase PSEEN2135 79 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 104781855 Common - hydrolase, alpha/beta fold family PSEEN2774 49 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 104779370 Common coxA cytochrome c oxidase, subunit I PSEEN0057 174 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 104781359 Common - hypothetical protein PSEEN2235 2 None None None 104780914 Common guaD guanine deaminase PSEEN1762 154 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 104781648 Common - long-chain-fatty-acid--CoA ligase PSEEN2544 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104780151 Common - methyl-accepting chemotaxis protein PSEEN0929 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104782665 Common sdhC succinate dehydrogenase, cytochrome b556 subunit PSEEN3644 86 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 104780775 Common - ribonuclease E Rne PSEEN1608 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 104783041 Pathogen - hypothetical protein PSEEN4059 1 None None None 104782409 Common polB DNA polymerase II PSEEN3365 65 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 104781932 Common - hypothetical protein PSEEN2857 4 None None None 104783124 Common - pyocin R2_PP, tail formation GpD PSEEN4149 37 COG3500 COG3500, Phage protein D General function prediction only 104779389 Common polA DNA polymerase I PSEEN0076 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 104781453 Common - hypothetical protein PSEEN2338 60 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 104782554 Common - transporter, EamA family PSEEN3524 60 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 104779662 Common secB preprotein translocase subunit SecB PSEEN0383 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 104779990 Common - transcriptional regulator, LysR family PSEEN0750 182 COG0583 LysR, Transcriptional regulator Transcription 104781053 Common - hypothetical protein PSEEN1909 16 COG3313 COG3313, Predicted Fe-S protein General function prediction only 104780392 Common - hydrolase, MutT/nudix family protein PSEEN1183 80 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104782330 Common aotM-2 arginine/ornithine ABC transporter, permease protein PSEEN3282 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 104784418 Common - hypothetical protein PSEEN5525 3 None None None 104780376 Common pcaB 3-carboxy-cis,cis-muconate cycloisomerase PSEEN1167 232 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 104780908 Common rmf ribosome modulation factor PSEEN1756 21 COG3130 Rmf, Ribosome modulation factor Translation, ribosomal structure and biogenesis 104782622 Common cynS cyanate hydratase PSEEN3599 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 104779936 Common recB exonuclease V, beta subunit PSEEN0692 213 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 104781148 Common - hypothetical protein PSEEN2009 45 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 104782167 Common - aldehyde dehydrogenase PSEEN3107 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104780405 Common glpK glycerol kinase PSEEN1197 178 COG0554 GlpK, Glycerol kinase Energy production and conversion 104783176 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase PSEEN4201 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 104781376 Common - hypothetical protein PSEEN2255 1 None None None 104782938 Pathogen - hypothetical protein PSEEN3945 1 None None None 104781429 Common mexF acridine efflux pump (RND family) PSEEN2312 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104779568 Common mutM formamidopyrimidine-DNA glycosylase PSEEN0287 180 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 104781035 Common - hypothetical protein PSEEN1890 12 COG2388 COG2388, Predicted acetyltransferase General function prediction only 104784208 Common - transcriptional regulator, AsnC family PSEEN5303 161 COG1522 Lrp, Transcriptional regulators Transcription 104782192 Common - transcriptional regulator, LysR family PSEEN3132 149 COG0583 LysR, Transcriptional regulator Transcription 104779700 Common apaG ApaG PSEEN0427 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 104779903 Common - type II/IV secretion system membrane protein PSEEN0649 74 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 104783118 Pathogen - phage protein PSEEN4143 1 None None None 104782228 Pathogen - hypothetical protein PSEEN3171 1 None None None 104780795 Common - lipoprotein PSEEN1631 1 None None None 104783306 Common - TonB-dependent haem/haemoglobin receptor PSEEN4333 89 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104783547 Common - hypothetical protein PSEEN4581 2 None None None 104784411 Common cls cardiolipin synthetase PSEEN5517 155 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 104781806 Common - hypothetical protein PSEEN2719 1 None None None 104782529 Common nuoJ NADH dehydrogenase subunit J PSEEN3492 83 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 104783739 Common - hypothetical protein PSEEN4797 6 None None None 104779606 Common - nuclease, Staphylococcal nuclease homologue PSEEN0326 49 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 104781671 Common chiC Chitinase ChiC (small isoform) PSEEN2568 22 COG3469 COG3469, Chitinase Carbohydrate transport and metabolism 104779737 Common tyrS tyrosyl-tRNA synthetase PSEEN0464 239 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104779666 Common ntrB sensory box histidine kinase NtrB PSEEN0387 219 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 104780345 Pathogen - hypothetical protein PSEEN1134 1 None None None 104781816 Common - alcohol dehydrogenase, zinc-containing PSEEN2731 169 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104781945 Common - cytochrome c PSEEN2873 55 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 104784330 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase PSEEN5433 181 COG0756 Dut, dUTPase Nucleotide transport and metabolism 104779949 Common - acyltransferase PSEEN0706 53 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104780368 Common - hypothetical protein PSEEN1158 1 None None None 104782186 Common - ferredoxin reductase component PSEEN3126 226 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 104782593 Common - ABC transporter, permease protein PSEEN3566 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 104782392 Common - hypothetical protein PSEEN3347 24 COG5528 COG5528, Predicted integral membrane protein Function unknown 104779917 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSEEN0663 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783935 Common - hypothetical protein PSEEN5015 9 COG4519 COG4519, Uncharacterized protein conserved in bacteria Function unknown 104782706 Common - anti-anti-sigma factor PSEEN3695 8 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 104783228 Common - sodium/hydrogen exchanger family protein PSEEN4255 132 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 104780209 Common - hypothetical protein PSEEN0988 53 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 104782245 Common - NAD(P)H-flavin oxidoreductase PSEEN3190 52 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104783381 Common - glucose ABC transporter, permease protein PSEEN4411 145 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 104781492 Common - hypothetical protein PSEEN2379 3 None None None 104783103 Common recX recombination regulator RecX PSEEN4127 91 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 104779999 Pathogen - hypothetical protein PSEEN0764 1 None None None 104783695 Common - flavin reductase PSEEN4752 109 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104783765 Common mltB membrane-bound lytic murein transglycosylase B PSEEN4824 103 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 104783501 Common algD GDP-mannose 6-dehydrogenase PSEEN4535 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 104783458 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase PSEEN4490 211 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 104779508 Common ssuF organosulfonate utilization protein SsuF PSEEN0222 53 COG3585 MopI, Molybdopterin-binding protein Coenzyme metabolism 104781794 Common - drug resistance transporter, EmrB/QacA family PSEEN2707 181 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783802 Common - sensor histidine kinase/response regulator (hybrid) PSEEN4865 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781600 Common - hypothetical protein PSEEN2491 3 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 104782286 Common - hypothetical protein PSEEN3235 54 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 104784250 Pathogen - hypothetical protein PSEEN5348 1 None None None 104783374 Common pgl 6-phosphogluconolactonase PSEEN4404 118 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 104779681 Common - hypothetical protein PSEEN0406 1 None None None 104781285 Common - polyketide synthase PSEEN2153 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104784032 Common bioC biotin biosynthesis protein BioC PSEEN5118 169 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104780148 Common - hypothetical protein PSEEN0926 21 None None None 104779598 Common - hypothetical protein PSEEN0318 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 104782400 Common - hypothetical protein PSEEN3356 1 COG3767 COG3767, Uncharacterized low-complexity protein Function unknown 104781642 Pathogen - hypothetical protein PSEEN2538 1 None None None 104779435 Common - hypothetical protein PSEEN0140 12 None None None 104782649 Common - hypothetical protein PSEEN3626 144 COG1741 COG1741, Pirin-related protein General function prediction only 104779550 Common - ABC transporter, permease protein PSEEN0268 102 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 104782363 Common - oxidase, FAD-linked PSEEN3316 53 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 104780698 Common - hypothetical protein PSEEN1520 20 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 104783205 Common - hypothetical protein PSEEN4230 175 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 104780589 Common - sensory box histidine kinase/response regulator hybrid PSEEN1405 222 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 104783537 Common - RNA polymerase sigma factor PSEEN4571 41 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104783679 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase PSEEN4735 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 104783639 Common - hypothetical protein PSEEN4685 1 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 104783906 Common - multidrug efflux SMR transporter PSEEN4982 122 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 104779639 Common - hypothetical protein PSEEN0360 26 COG4648 COG4648, Predicted membrane protein Function unknown 104783604 Common - bifunctional antitoxin/transcriptional repressor RelB PSEEN4646 10 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 104782601 Pathogen - hypothetical protein PSEEN3576 2 None None None 104782658 Common sucC succinyl-CoA synthetase subunit beta PSEEN3636 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 104783820 Common - hypothetical protein PSEEN4884 73 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 104783843 Common - mannose-6-phosphate isomerase PSEEN4909 34 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 104781990 Common - hypothetical protein PSEEN2920 46 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104782014 Common - exopolysaccharide transport protein PSEEN2947 60 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 104781871 Common pcaF-2 beta-ketoadipyl CoA thiolase PSEEN2795 176 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104781705 Common - Arginase PSEEN2606 31 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 104779492 Common - putative amino-acid ABC transporter ATP-binding protein YecC PSEEN0205 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 104781586 Common - asparagine synthetase PSEEN2476 114 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 104781317 Common - oxidoreductase with FAD/NAD(P)-binding domain PSEEN2188 110 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104783161 Common - transcriptional regulator PSEEN4186 24 COG2932 COG2932, Predicted transcriptional regulator Transcription 104779685 Common prfH peptide chain release factor-like protein PSEEN0411 215 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 104780749 Common - hypothetical protein PSEEN1578 1 None None None 104781273 Common - hypothetical protein PSEEN2140 9 COG1475 Spo0J, Predicted transcriptional regulators Transcription 104784235 Common rho transcription termination factor Rho PSEEN5331 205 COG1158 Rho, Transcription termination factor Transcription 104782213 Common - sigma-54 dependent transcriptional regulator PSEEN3155 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 104781191 Common glgA glycogen synthase PSEEN2054 151 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 104779732 Common - hypothetical protein PSEEN0459 94 COG1981 COG1981, Predicted membrane protein Function unknown 104780397 Common - sensor histidine kinase PSEEN1189 187 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104779374 Common - hypothetical protein PSEEN0061 54 COG3346 COG3346, Uncharacterized conserved protein Function unknown 104779791 Common - hypothetical protein PSEEN0526 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 104781135 Pathogen - hypothetical protein PSEEN1996 3 None None None 104782419 Common - transcriptional regulator, AraC family PSEEN3375 73 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104780609 Common - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) PSEEN1426 137 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 104782772 Common - DNA-binding response regulator, LuxR family PSEEN3767 223 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104781956 Common - putative aminotransferase PSEEN2885 236 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 104782613 Pathogen - hypothetical protein PSEEN3589 1 None None None 104780665 Common ubiG 3-demethylubiquinone-9 3-methyltransferase PSEEN1484 193 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 104781947 Common - oxidase, large subunit PSEEN2875 114 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 104779901 Common - hypothetical protein PSEEN0647 35 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 104779393 Common dsbA thiol:disulfide interchange protein, periplasmic, alkali-inducible PSEEN0081 69 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 104780964 Common psvA peptide synthase PSEEN1815 223 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104781783 Common - response regulator PSEEN2695 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104780248 Common - TonB-dependent siderophore receptor PSEEN1029 115 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 104784142 Common cadA cadmium translocating P-type ATPase PSEEN5232 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 104781069 Common - ABC transporter, periplasmic binding protein PSEEN1925 103 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104779952 Common - Lysophospholipase PSEEN0709 68 COG2267 PldB, Lysophospholipase Lipid metabolism 104783052 Common nadA quinolinate synthetase PSEEN4071 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 104781634 Common - TonB-dependent siderophore receptor PSEEN2529 121 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 104782281 Common - pyoverdine sidechain peptide synthetase PSEEN3230 213 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104782226 Common ogt methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase) PSEEN3169 217 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 104783960 Common - ATP-dependent RNA helicase RhlE, DEAD box family PSEEN5042 237 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 104781243 Common - sigma-70 factor, ECF subfamily PSEEN2108 21 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104780777 Common - hydrolase, haloacid dehalogenase-like family PSEEN1610 198 COG0546 Gph, Predicted phosphatases General function prediction only 104781817 Common - hypothetical protein PSEEN2732 4 COG1359 COG1359, Uncharacterized conserved protein Function unknown 104784027 Common - acyl-CoA dehydrogenase PSEEN5113 146 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104780710 Common - hypothetical protein PSEEN1535 105 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 104783013 Common - hypothetical protein PSEEN4029 20 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 104779969 Common - oxidoreductase, zinc-binding alcohol dehydrogenase PSEEN0727 187 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104783147 Pathogen - hypothetical protein PSEEN4172 1 None None None 104780498 Common - hypothetical protein PSEEN1295 1 None None None 104780797 Common - hypothetical protein PSEEN1633 24 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 104783988 Common phaF polyhydroxyalkanoate synthesis protein PhaF PSEEN5070 16 COG3937 COG3937, Uncharacterized conserved protein Function unknown 104779763 Common rpmC 50S ribosomal protein L29 PSEEN0498 141 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 104779912 Common - lipoprotein PSEEN0658 14 None None None 104779929 Common - short chain dehydrogenase PSEEN0676 186 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104781884 Common - hypothetical protein PSEEN2809 96 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 104780020 Common ftsJ 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent PSEEN0786 139 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 104780788 Common - hypothetical protein PSEEN1623 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 104779859 Common - cobalamine TonB-dependent receptor PSEEN0599 125 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 104781481 Common - hypothetical protein PSEEN2368 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 104782293 Common - hypothetical protein PSEEN3242 11 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 104781071 Common - acetyltransferase, GNAT family PSEEN1928 1 COG0456 RimI, Acetyltransferases General function prediction only 104782106 Common macA macrolide efflux protein MacA PSEEN3043 168 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104784350 Common - transcriptional regulator, LysR family PSEEN5454 190 COG0583 LysR, Transcriptional regulator Transcription 104780214 Common - phosphonate ABC transporter, ATP-binding protein PSEEN0993 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 104783645 Common lspA lipoprotein signal peptidase PSEEN4691 132 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783252 Common - type II secretion system protein F PSEEN4279 146 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 104780107 Common - hypothetical protein PSEEN0883 56 COG3272 COG3272, Uncharacterized conserved protein Function unknown 104780056 Common rplU 50S ribosomal protein L21 PSEEN0825 151 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 104783080 Common - cold shock protein PSEEN4100 176 COG1278 CspC, Cold shock proteins Transcription 104780153 Common - DNA-binding transcriptional regulator FruR PSEEN0931 122 COG1609 PurR, Transcriptional regulators Transcription 104783449 Common ftsA cell division protein FtsA PSEEN4481 192 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 104779428 Common - non ribosomal peptide synthethase, loading module PSEEN0132 206 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104779586 Common - hypothetical protein PSEEN0305 53 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 104781310 Common - hypothetical protein PSEEN2181 4 None None None 104783886 Common - hypothetical protein PSEEN4959 2 None None None 104782476 Common - TonB-dependent siderophore receptor PSEEN3436 115 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104783007 Common - glutamine amidotransferase, class II PSEEN4023 72 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 104779674 Common pqqC pyrroloquinoline quinone biosynthesis protein PqqC PSEEN0396 39 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 104783297 Pathogen - hypothetical protein PSEEN4324 1 None None None 104784340 Common - glutamine synthetase PSEEN5444 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104784449 Common rnpA ribonuclease P PSEEN5558 75 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 104784313 Common - transcriptional regulator PSEEN5414 124 COG1396 HipB, Predicted transcriptional regulators Transcription 104782745 Pathogen - hypothetical protein PSEEN3738 1 None None None 104783513 Common - hypothetical protein PSEEN4547 1 None None None 104782562 Common - putative monovalent cation/H+ antiporter subunit C PSEEN3534 94 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 104782446 Common - sensory box histidine kinase/response regulator (hybrid) PSEEN3403 204 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104781862 Pathogen - hypothetical protein PSEEN2785 2 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 104781723 Common - quinone oxidoreductase PSEEN2630 155 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 104782780 Common cycL cytochrome c-type biogenesis protein CycL PSEEN3775 93 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 104783354 Common - PTS system, N-acetylglucosamine-specific IIBC component PSEEN4383 51 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 104779882 Common - acetyltransferase, GNAT family PSEEN0624 10 COG3153 COG3153, Predicted acetyltransferase General function prediction only 104781751 Common - amino acid ABC transporter, ATP-binding protein PSEEN2663 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 104782061 Common - methyl-accepting chemotaxis transducer PSEEN2997 117 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104779642 Common - acyltransferase PSEEN0363 86 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104783311 Common bglX beta-D-glucoside glucohydrolase, periplasmic PSEEN4339 128 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 104781758 Common tyrB-2 aromatic amino acid aminotransferase PSEEN2670 90 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 104782963 Common - glutamine synthetase PSEEN3971 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104784109 Common - AsmA protein PSEEN5198 48 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 104783313 Common - sigma-54 dependent response regulator PSEEN4341 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104780438 Common - outer membrane protein, OmpA family PSEEN1231 158 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104782324 Common - hypothetical protein PSEEN3276 29 None None None 104782851 Common flgM negative regulator of flagellin synthesis FlgM PSEEN3847 15 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 104782033 Common - hypothetical protein PSEEN2966 8 None None None 104780326 Common - multidrug RND transporter, membrane fusion protein (HylD family) PSEEN1110 168 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104782472 Common - lipase, class 3 PSEEN3432 18 COG3675 COG3675, Predicted lipase Lipid metabolism 104782672 Common - outer membrane protein; OmpA family PSEEN3654 169 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 104783332 Common ttgB multidrug/solvent RND transporter TtgB PSEEN4361 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104782927 Common - transcriptional regulator, LysR family PSEEN3932 171 COG0583 LysR, Transcriptional regulator Transcription 104782395 Pathogen - hypothetical protein PSEEN3351 1 None None None 104780281 Common - Phosphatidylcholine-hydrolyzing phospholipase C PSEEN1065 2 None None None 104781679 Common - hypothetical protein PSEEN2577 1 None None None 104783444 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PSEEN4476 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 104784072 Common soxA sarcosine oxidase (alpha subunit) oxidoreductase protein PSEEN5159 180 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 104783248 Common - type II secretion system protein J PSEEN4275 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104784276 Common - hypothetical protein PSEEN5374 3 None None None 104782811 Common fliM flagellar motor switch protein FliM PSEEN3806 112 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 104781545 Common - magnesium chelatase, subunit ChII PSEEN2434 66 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 104783215 Common - Acr-type multidrug efflux transporter (RND family) PSEEN4240 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104782682 Common - efflux ABC transporter, ATP-binding/permease protein PSEEN3665 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 104780739 Common - transcriptional regulator, LysR family PSEEN1565 136 COG0583 LysR, Transcriptional regulator Transcription 104783260 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ PSEEN4287 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 104780936 Common - transcriptional regulator PSEEN1785 87 COG0789 SoxR, Predicted transcriptional regulators Transcription 104782112 Common pobR transcriptional regulator PobR PSEEN3049 102 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783108 Common - Mu-like phage translational regulator Com PSEEN4132 3 COG4416 Com, Mu-like prophage protein Com General function prediction only 104779538 Common rffA TDP-4-oxo-6-deoxy-D-glucose transaminase PSEEN0254 196 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 104783370 Common - hypothetical protein PSEEN4400 5 None None None 104779659 Common gpmA phosphoglyceromutase PSEEN0380 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 104781179 Common - transcriptional regulator PSEEN2041 168 COG1959 COG1959, Predicted transcriptional regulator Transcription 104780623 Common - transporter, mechanosensitive ion channel family protein PSEEN1440 118 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104783656 Common ilvC ketol-acid reductoisomerase PSEEN4709 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 104780118 Common - hypothetical protein PSEEN0894 1 None None None 104784349 Common tonB ferric siderophore transport system, periplasmic binding protein TonB PSEEN5453 19 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 104784017 Common - outer membrane lipoprotein Blc PSEEN5102 73 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 104780656 Common - hypothetical protein PSEEN1475 12 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 104779713 Common - polyamine ABC transporter, permease protein PSEEN0440 151 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 104780273 Common dppA dipeptide ABC transporter, periplasmic dipeptide-binding protein PSEEN1057 204 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 104779356 Common - luciferase-like monooxygenase PSEEN0043 105 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104780408 Common - ABC transporter, ATP-binding protein PSEEN1200 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104781283 Common - Ornithine cyclodeaminase PSEEN2151 72 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 104782718 Common - lipoprotein releasing system transmembrane protein LolC PSEEN3708 157 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 104782493 Common - membrane protein Alg44-like PSEEN3455 2 COG5581 COG5581, Predicted glycosyltransferase Cell envelope biogenesis, outer membrane 104780267 Common - FAD dependent oxidoreductase PSEEN1050 108 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104783200 Common - sodium:hydrogen antiporter (CPA1 family) PSEEN4225 88 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 104781667 Pathogen - hypothetical protein PSEEN2563 1 None None None 104784289 Common kefB glutathione-regulated potassium-proton antiporter PSEEN5389 164 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 104779878 Common - TonB-dependent receptor, Fe transport PSEEN0620 69 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104782941 Common - hypothetical protein PSEEN3948 1 None None None 104783062 Pathogen - hypothetical protein PSEEN4082 1 None None None 104783183 Common lpxA UDP-N-acetylglucosamine acyltransferase PSEEN4208 164 COG1043 LpxA, Acyl- acyl carrier protein 104783796 Common prmA ribosomal protein L11 methyltransferase PSEEN4859 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 104782572 Common - hypothetical protein PSEEN3544 1 None None None 104780517 Common - oxidoreductase, FAD-binding PSEEN1322 150 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 104779519 Common hslO Hsp33-like chaperonin PSEEN0233 118 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 104780367 Common pitA Low-affinity inorganic phosphate transporter PSEEN1157 147 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 104780968 Common - hypothetical protein PSEEN1819 14 COG3789 COG3789, Uncharacterized protein conserved in bacteria Function unknown 104781395 Common - hypothetical protein PSEEN2275 81 COG2259 COG2259, Predicted membrane protein Function unknown 104784416 Common hcnA hydrogen cyanide synthase HcnA PSEEN5522 26 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 104779526 Common - formate dehydrogenase accessory protein FdhD PSEEN0241 132 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 104782801 Common fliA flagellar biosynthesis sigma factor PSEEN3796 215 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 104783727 Common pcaH protocatechuate 3,4-dioxygenase beta chain (3,4-PCD) PSEEN4784 51 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 104782269 Common - acetyltransferase, GNAT family PSEEN3217 30 COG0456 RimI, Acetyltransferases General function prediction only 104781003 Common - amino acid ABC transporter, permease protein PSEEN1856 170 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 104782914 Common - hypothetical protein PSEEN3918 17 COG2962 RarD, Predicted permeases General function prediction only 104779498 Common tauC taurine ABC transporter, permease protein PSEEN0211 195 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104781670 Common - hypothetical protein PSEEN2567 28 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 104783597 Common - hypothetical protein PSEEN4638 40 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 104780551 Common cysM cysteine synthase B PSEEN1362 227 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 104782252 Common - beta-ketothiolase PSEEN3197 178 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104783171 Common adhC-2 Alcohol dehydrogenase class III PSEEN4196 199 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 104784302 Common - probable aldehyde dehydrogenase PSEEN5402 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104779385 Common - transcriptional repressor of Zn transport system Zur PSEEN0072 113 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 104779573 Common - hypothetical protein PSEEN0292 9 None None None 104782913 Common - transcriptional regulator, AraC family PSEEN3917 23 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104784424 Common - polyketide synthase PSEEN5531 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104780726 Common aprD alkaline protease (aprA) secretion protein aprD PSEEN1552 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 104783125 Common - pyocin R2_PP, tail component protein PSEEN4150 4 COG5004 COG5004, P2-like prophage tail protein X General function prediction only 104781495 Common - transcriptional regulator, Cro/CI family PSEEN2382 113 COG1476 COG1476, Predicted transcriptional regulators Transcription 104779709 Common - sensory box histidine kinase PSEEN0436 172 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 104779829 Common selB selenocysteinyl-tRNA-specific translation factor PSEEN0569 249 COG3276 SelB, Selenocysteine-specific translation elongation factor Translation, ribosomal structure and biogenesis 104782990 Common - hypothetical protein PSEEN4005 38 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 104779978 Common - hypothetical protein PSEEN0738 57 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104781490 Common - TonB-dependent siderophore receptor PSEEN2377 111 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 104783614 Common - hypothetical protein PSEEN4659 1 None None None 104780064 Common - hypothetical protein PSEEN0834 1 None None None 104781980 Common - hypothetical protein PSEEN2909 61 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 104783923 Common putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase PSEEN4999 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 104780288 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A PSEEN1072 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 104782835 Common flgL flagellar hook-associated protein FlgL PSEEN3831 101 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 104782308 Common - hypothetical protein PSEEN3258 6 COG3058 FdhE, Uncharacterized protein involved in formate dehydrogenase formation Posttranslational modification, protein turnover, chaperones 104779559 Common - sodium:dicarboxylate symporter PSEEN0277 152 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 104779696 Common - hypothetical protein PSEEN0423 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 104784370 Common - permease (MFS superfamily) PSEEN5474 141 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780919 Common - chromosome segregation SMC protein. PSEEN1767 177 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 104780509 Common - hypothetical protein PSEEN1306 1 None None None 104781605 Common bauD ferric siderophore ABC transporter, permease protein PSEEN2496 188 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 104782301 Common - hypothetical protein PSEEN3250 2 COG4281 ACB, Acyl-CoA-binding protein Lipid metabolism 104780125 Common - hypothetical protein PSEEN0902 101 COG2135 COG2135, Uncharacterized conserved protein Function unknown 104783188 Common - membrane-associated Zn-dependent proteases 1 PSEEN4213 216 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 104779358 Common - lipoprotein PSEEN0045 1 None None None 104784020 Common - hypothetical protein PSEEN5105 63 COG3803 COG3803, Uncharacterized protein conserved in bacteria Function unknown 104779961 Common - ATP-dependent RNA helicase, DEAD box family (RhlE) PSEEN0718 229 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 104783028 Common moaB-2 molybdopterin biosynthesis protein B PSEEN4045 180 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 104782243 Common glcF glycolate oxidase iron-sulfur subunit PSEEN3188 169 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 104780523 Common - hypothetical protein PSEEN1329 47 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 104779822 Pathogen - hypothetical protein PSEEN0562 1 None None None 104783851 Common pncB-1 nicotinate phosphoribosyltransferase PSEEN4919 62 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 104783337 Common - hypothetical protein PSEEN4366 26 COG4539 COG4539, Predicted membrane protein Function unknown 104780253 Common - ornithine decarboxylase PSEEN1035 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 104779725 Common - hypothetical protein PSEEN0452 86 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 104783483 Common mdeA methionine gamma-lyase PSEEN4515 211 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 104779668 Common glnA glutamine synthetase type I PSEEN0390 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104779780 Common rpoA DNA-directed RNA polymerase subunit alpha PSEEN0514 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 104782276 Common pvdE pyoverdine ABC export system, permease/ATP-binding protein PSEEN3224 217 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 104783568 Common - MFS transporter PSEEN4609 136 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 104782485 Common nhaA sodium:proton antiporter NhaA PSEEN3445 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 104779989 Common - hypothetical protein PSEEN0749 10 None None None 104780352 Common - hypothetical protein PSEEN1141 11 COG2353 COG2353, Uncharacterized conserved protein Function unknown 104781388 Common - aminoglycoside aminotranferase PSEEN2268 60 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 104782551 Common - hypothetical protein PSEEN3514 1 None None None 104780478 Common dinG ATP-dependent DNA helicase DinG PSEEN1273 129 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 104780189 Common - outer membrane autotransporter PSEEN0968 89 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 104780579 Common - transporter PSEEN1390 59 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781997 Common - azoreductase PSEEN2929 100 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 104781231 Common ureC urease subunit alpha PSEEN2096 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 104782823 Common fleR response regulator FleR PSEEN3818 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104779721 Common trpD anthranilate phosphoribosyltransferase PSEEN0448 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 104780133 Common - hypothetical protein PSEEN0910 18 None None None 104783707 Common hasD heme acquisition ABC transporter HasD, ATP binding protein PSEEN4764 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 104780241 Common hisS histidyl-tRNA synthetase PSEEN1022 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104784102 Common - glycine betaine/L-proline ABC transporter, ATP-binding subunit PSEEN5190 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 104780048 Common - ATP-dependent protease PSEEN0817 112 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 104783463 Common - hypothetical protein PSEEN4495 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 104781912 Common csgG Curli production assembly/transport component csgG precursor PSEEN2837 17 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 104782653 Common - hypothetical protein PSEEN3630 30 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 104779957 Common mdaB probable nitroreductase or quinone reductase PSEEN0714 46 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 104781214 Common - hypothetical protein PSEEN2079 101 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 104784246 Common - hypothetical protein PSEEN5344 8 COG5633 COG5633, Predicted periplasmic lipoprotein General function prediction only 104782849 Common - chemotaxis protein CheV PSEEN3845 178 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104782010 Common - hypothetical protein PSEEN2943 3 None None None 104780542 Common - tryptophan repressor binding protein WrbA PSEEN1353 117 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 104780820 Common - transporter, NCS1 nucleoside transporter family PSEEN1660 70 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 104780332 Common - hypothetical protein PSEEN1119 32 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 104780924 Pathogen - hypothetical protein PSEEN1773 1 None None None 104782842 Common - hypothetical protein PSEEN3838 2 None None None 104781369 Common - hypothetical protein PSEEN2248 16 COG4639 COG4639, Predicted kinase General function prediction only 104780360 Common - hypothetical protein PSEEN1149 2 None None None 104783269 Common algU RNA polymerase sigma factor AlgU PSEEN4296 174 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104781690 Common - glutathione-regulated potassium-proton antiporter PSEEN2590 194 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 104783280 Common - tricarboxylate transport protein TctA PSEEN4307 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 104782503 Common - hypothetical protein PSEEN3465 76 COG3189 COG3189, Uncharacterized conserved protein Function unknown 104783239 Common - hypothetical protein PSEEN4266 5 None None None 104779615 Common - hypothetical protein PSEEN0336 40 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 104779728 Common - ubiquinone biosynthesis protein COQ7 PSEEN0455 50 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 104783928 Common dbpA ATP-dependent RNA helicase DbpA PSEEN5008 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 104783593 Common - hypothetical protein PSEEN4634 16 COG5591 COG5591, Uncharacterized conserved protein Function unknown 104782543 Common - AFG1-like ATPase PSEEN3506 101 COG1485 COG1485, Predicted ATPase General function prediction only 104783087 Common - hypothetical protein PSEEN4110 69 COG2898 COG2898, Uncharacterized conserved protein Function unknown 104784394 Common - transcriptional regulator, RpiR family PSEEN5499 87 COG1737 RpiR, Transcriptional regulators Transcription 104781562 Common - lipopolysaccharide biosynthesis sugar transferase PSEEN2452 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 104780677 Common - polysaccharide biosynthesis protein involved O-antigen biosynthesis protein PSEEN1497 31 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 104782355 Common arsC arsenate reductase PSEEN3308 122 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 104780705 Common - hydrolase, alpha/beta fold family PSEEN1527 31 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 104781044 Common - hypothetical protein PSEEN1899 19 None None None 104780328 Common - hypothetical protein PSEEN1112 2 COG3490 COG3490, Uncharacterized protein conserved in bacteria Function unknown 104784113 Common - hypothetical protein PSEEN5202 4 None None None 104780014 Common dapB dihydrodipicolinate reductase PSEEN0780 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 104780226 Common - tRNA/rRNA methyltransferase, TrmH family, group 1 PSEEN1006 158 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 104784263 Common rnk nucleoside diphosphate kinase regulator PSEEN5361 67 COG0782 GreA, Transcription elongation factor Transcription 104780976 Common - formate dehydrogenase, beta subunit PSEEN1827 163 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 104782537 Pathogen - hypothetical protein PSEEN3500 1 None None None 104781919 Common - hypothetical protein PSEEN2844 7 None None None 104782595 Common - ABC transporter, ATP-binding protein PSEEN3568 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 104780318 Common ttg2D toluene tolerance protein Ttg2D PSEEN1102 57 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 104784041 Common glcB malate synthase G PSEEN5127 66 COG2225 AceB, Malate synthase Energy production and conversion 104783805 Common cobJ precorrin-3B C17-methyltransferase PSEEN4868 117 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 104781692 Common - transcriptional regulator, LysR family PSEEN2592 187 COG0583 LysR, Transcriptional regulator Transcription 104782980 Common - hypothetical protein PSEEN3993 3 None None None 104783057 Common - chloramphenicol acetyltransferase PSEEN4077 174 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 104781340 Common - crcB protein PSEEN2215 132 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 104781077 Common - hypothetical protein PSEEN1934 1 None None None 104779542 Common - SAM-dependent methyltransferase PSEEN0258 32 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104783809 Common cobL precorrin-6Y C5,15-methyltransferase (decarboxylating) PSEEN4872 108 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 104781771 Common - Ribonuclease Z PSEEN2683 113 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 104780454 Common - chemotaxis signal transduction protein; CheW domain protein PSEEN1248 10 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104781558 Common - glycosyl transferase PSEEN2448 56 COG2990 VirK, Uncharacterized protein conserved in bacteria Function unknown 104780058 Common obgE GTPase ObgE PSEEN0828 249 COG0536 Obg, Predicted GTPase General function prediction only 104781032 Common - hypothetical protein PSEEN1887 1 None None None 104784095 Common - 3-hydroxybutyryl-CoA dehydrogenase PSEEN5183 159 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 104781533 Common - gluconokinase PSEEN2421 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 104781955 Common - transcriptional regulator, LuxR family PSEEN2884 57 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104780182 Common - hypothetical protein PSEEN0961 4 None None None 104782422 Common - hypothetical protein PSEEN3378 101 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 104780906 Common - nitrate-binding protein NasS PSEEN1754 91 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104782230 Common - hypothetical protein PSEEN3174 1 None None None 104780535 Common phoQ Sensor protein PhoQ PSEEN1346 194 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104781938 Pathogen - hypothetical protein PSEEN2866 1 None None None 104780247 Common - sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein PSEEN1028 102 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 104779579 Common - zinc-dependent peptidase, M16 family PSEEN0298 172 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 104783406 Common sdaA-2 L-serine deaminase I PSEEN4437 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 104783178 Common - cell cycle protein MesJ PSEEN4203 197 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 104781075 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSEEN1932 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 104783490 Common aapM general amino acid ABC transporter, permease protein PSEEN4523 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104784206 Common argE acetylornithine deacetylase PSEEN5301 197 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 104780822 Common - hypothetical protein PSEEN1663 25 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 104779915 Common - hypothetical protein PSEEN0661 39 COG1694 MazG, Predicted pyrophosphatase General function prediction only 104779394 Common - DNAse I-like hydrolase PSEEN0082 39 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 104782767 Common - ammonium transporter PSEEN3762 202 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 104779608 Common mrcA Penicillin-binding protein 1A PSEEN0328 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 104783538 Common - FecR-like transmembrane sensor PSEEN4572 38 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104779774 Common rplO 50S ribosomal protein L15 PSEEN0509 212 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 104783383 Common - N-acyl-D-glucosamine 2-epimerase PSEEN4413 28 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 104783497 Common moaC molybdenum cofactor biosynthesis protein C PSEEN4530 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 104782403 Common - UDP-glucose dehydrogenase PSEEN3359 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 104780507 Common - transcriptional regulator, LysR family PSEEN1304 184 COG0583 LysR, Transcriptional regulator Transcription 104782708 Common - hypothetical protein PSEEN3698 6 None None None 104781653 Common - hypothetical protein PSEEN2549 18 None None None 104781100 Common - ribose ABC transporter, periplasmic ribose-binding protein RbsD PSEEN1957 47 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 104783435 Common ampG muropeptide permease AmpG PSEEN4466 100 None None None 104780495 Common - signal transduction protein; GGDEF/EAL domain PSEEN1292 179 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104781037 Common - hypothetical protein PSEEN1892 5 None None None 104779981 Common - hypothetical protein PSEEN0741 13 None None None 104780025 Common secG preprotein translocase subunit SecG PSEEN0792 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 104781538 Common - hypothetical protein PSEEN2426 24 COG3813 COG3813, Uncharacterized protein conserved in bacteria Function unknown 104784448 Common - hypothetical protein PSEEN5557 183 COG0759 COG0759, Uncharacterized conserved protein Function unknown 104784429 Common - polyketide synthase PSEEN5536 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783403 Common - hypothetical protein PSEEN4434 4 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 104783733 Common - hypothetical protein PSEEN4791 2 None None None 104780873 Common - hypothetical protein PSEEN1716 1 None None None 104783990 Common - hypothetical protein PSEEN5072 5 None None None 104782788 Common - hypothetical protein PSEEN3783 3 None None None 104780683 Common - glycosyltransferase (group 1) PSEEN1503 106 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104781050 Common - hypothetical protein PSEEN1906 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 104784118 Common - amino acid ABC transporter, ATP-binding protein PSEEN5207 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 104780379 Common - glucose dehydrogenase Gcd PSEEN1170 59 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 104780452 Common - chemotaxis signal transduction protein; CheW domain protein PSEEN1246 52 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104783135 Common gpI pyocin R2_PP, tail formation protein GpI PSEEN4160 28 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 104782025 Common - hypothetical protein PSEEN2958 1 None None None 104780201 Common - L-ornithine 5-/L-lysine 6-monooxygenase PSEEN0980 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 104783349 Pathogen - hypothetical protein PSEEN4378 1 None None None 104784111 Common - hypothetical protein PSEEN5200 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 104781828 Common - hypothetical protein PSEEN2746 24 None None None 104779948 Common - phosphatidate cytidylyltransferase PSEEN0705 210 COG4589 COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase General function prediction only 104779386 Common - Zinc ABC transporter ZnuA, periplasmic binding protein PSEEN0073 146 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 104780588 Common - hypothetical protein PSEEN1404 139 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 104782764 Common - pseudouridylate synthase PSEEN3759 213 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 104783258 Common CzrR- heavy-metal DNA-binding response regulator CzrR PSEEN4285 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104781370 Common - hypothetical protein PSEEN2249 6 COG5455 COG5455, Predicted integral membrane protein Function unknown 104780256 Common - FecA-like outer membrane receptor PSEEN1039 123 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 104784241 Common - hypothetical protein PSEEN5339 73 COG3000 ERG3, Sterol desaturase Lipid metabolism 104781808 Common - hypothetical protein PSEEN2721 1 None None None 104783720 Common cioA ubiquinol oxidase subunit I, cyanide insensitive PSEEN4777 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 104782582 Common phnX 2-phosphonoacetaldehyde hydrolase PSEEN3554 36 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 104781390 Common - phosphoglycerate mutase family protein PSEEN2270 28 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 104781854 Common - hydrolase, alpha/beta fold family PSEEN2773 76 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 104783517 Common - short chain dehydrogenase PSEEN4551 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 104780347 Common - acyltransferase PSEEN1136 102 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104782514 Common - hypothetical protein PSEEN3476 1 None None None 104779432 Common - transcriptional regulator, GntR family PSEEN0137 133 COG1802 GntR, Transcriptional regulators Transcription 104779560 Common - hypothetical protein PSEEN0278 7 None None None 104781093 Common - hypothetical protein PSEEN1950 1 None None None 104781377 Common - hypothetical protein PSEEN2257 1 None None None 104784063 Common creD hypothetical protein PSEEN5150 29 COG4452 CreD, Inner membrane protein involved in colicin E2 resistance Defense mechanisms 104782194 Common benF benzoate-specific porin PSEEN3134 10 None None None 104784087 Common - iron-sulfur cluster-binding protein PSEEN5175 84 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 104781209 Common - transcriptional regulator, LysR family PSEEN2073 186 COG0583 LysR, Transcriptional regulator Transcription 104781849 Common ligD ATP-dependent DNA ligase PSEEN2767 110 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 104779677 Common pqqF coenzyme PQQ synthesis protein F PSEEN0399 108 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 104782736 Common fadA 3-ketoacyl-CoA thiolase PSEEN3727 175 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 104779373 Common - hypothetical protein PSEEN0060 5 None None None 104781194 Common - hypothetical protein PSEEN2057 12 None None None 104779569 Common - gamma-glutamyltranspeptidase precursor PSEEN0288 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 104783668 Common - ABC transporter, periplasmic binding protein PSEEN4722 145 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 104780489 Common livM leucine/isoleucine/valine transporter permease subunit PSEEN1284 147 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 104783504 Common algK alginate biosynthesis precursor AlgK PSEEN4538 8 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 104780036 Common cstA carbon starvation protein CstA PSEEN0803 108 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 104782723 Common gap-2 glyceraldehyde-3-phosphate dehydrogenase PSEEN3714 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 104784346 Common - hypothetical protein PSEEN5450 112 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104781551 Common - hypothetical protein PSEEN2441 1 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 104780845 Common - aspartate-semialdehyde dehydrogenase PSEEN1687 174 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 104783388 Common gap-1 glyceraldehyde 3-phosphate dehydrogenase PSEEN4418 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 104780929 Pathogen - hypothetical protein PSEEN1778 1 None None None 104780196 Common - hypothetical protein PSEEN0975 167 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 104779405 Common - lipoprotein PSEEN0095 28 COG3218 COG3218, ABC-type uncharacterized transport system, auxiliary component General function prediction only 104781743 Common - hypothetical protein PSEEN2653 3 None None None 104780864 Common - hypothetical protein PSEEN1707 19 COG3782 COG3782, Uncharacterized protein conserved in bacteria Function unknown 104781016 Common hupB DNA-binding protein HU-beta PSEEN1871 210 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 104781169 Common - gamma-carboxymuconolactone decarboxylase PSEEN2030 80 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 104781931 Common - hypothetical protein PSEEN2856 1 None None None 104782771 Common dgt deoxyguanosinetriphosphate triphosphohydrolase-like protein PSEEN3766 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 104783224 Common thrC threonine synthase PSEEN4251 135 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 104782527 Common nuoH NADH dehydrogenase subunit H PSEEN3490 189 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 104779480 Common gabD succinate-semialdehyde dehydrogenase I PSEEN0189 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104779736 Common - peptidase, M23/M37 family PSEEN0463 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 104781895 Common - sigma-54 dependent transcriptional regulator PSEEN2820 175 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 104783783 Common - DNA-damage-inducible protein F PSEEN4845 87 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 104780569 Common - nitroreductase; cobalamine biosynthesis protein PSEEN1380 87 COG0778 NfnB, Nitroreductase Energy production and conversion 104782429 Common ivd isovaleryl-CoA dehydrogenase PSEEN3386 171 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104783609 Common - hypothetical protein PSEEN4652 1 None None None 104781448 Common XcpR-2 type II secretion pathway protein E PSEEN2333 214 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 104779787 Common - hypothetical protein PSEEN0522 31 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 104783827 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSEEN4892 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 104783863 Common rnr exoribonuclease R PSEEN4933 197 COG0557 VacB, Exoribonuclease R Transcription 104780711 Common - hypothetical protein PSEEN1536 1 None None None 104782209 Common ppiC-2 peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) PSEEN3151 144 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 104783729 Common - hypothetical protein PSEEN4787 118 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 104782345 Common - hypothetical protein PSEEN3297 11 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 104781261 Common - hypothetical protein PSEEN2128 1 None None None 104783602 Pathogen - hypothetical protein PSEEN4644 1 None None None 104782456 Pathogen - hypothetical protein PSEEN3414 1 None None None 104779804 Common - hypothetical protein PSEEN0540 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104782317 Pathogen - hypothetical protein PSEEN3268 1 None None None 104781654 Common - multidrug efflux transporter, RND family PSEEN2550 85 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 104783811 Common cobK cobalt-precorrin-6x reductase PSEEN4874 50 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 104779545 Common aguA Agmatine deiminase PSEEN0261 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 104783950 Common - hypothetical protein PSEEN5031 27 COG3686 COG3686, Predicted membrane protein Function unknown 104780308 Common - sigma N (sigma 54) modulator RpoX PSEEN1092 125 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 104783768 Common - hypothetical protein PSEEN4827 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 104781189 Common - 4-alpha-glucanotransferase MalQ PSEEN2052 119 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 104783540 Common - hypothetical protein PSEEN4574 1 None None None 104781407 Common - hypothetical protein PSEEN2288 1 None None None 104784432 Common glmU UDP-N-acetylglucosamine pyrophosphorylase PSEEN5540 233 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 104779869 Common - hypothetical protein PSEEN0610 22 COG4637 COG4637, Predicted ATPase General function prediction only 104783838 Common - DNA-binding transcriptional activator PSEEN4904 11 None None None 104781051 Common prpD 2-methylcitrate dehydratase PSEEN1907 60 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 104783115 Common - Mu-like phage tail protein gpP PSEEN4140 20 COG4379 COG4379, Mu-like prophage tail protein gpP General function prediction only 104781593 Common - hypothetical protein PSEEN2483 1 None None None 104780082 Common - translation-associated GTPase PSEEN0854 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 104783073 Common ruvA Holliday junction DNA helicase motor protein PSEEN4093 208 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 104779446 Common - transcriptional activator, MarR family PSEEN0152 56 COG1846 MarR, Transcriptional regulators Transcription 104779448 Common - hypothetical protein PSEEN0154 11 None None None 104783282 Pathogen - hypothetical protein PSEEN4309 1 None None None 104781765 Common - hypothetical protein PSEEN2677 1 None None None 104781427 Common - sensory box protein PSEEN2310 185 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104781323 Common - acetyl transferase, GNAT family PSEEN2196 104 COG2153 ElaA, Predicted acyltransferase General function prediction only 104783713 Common radA DNA repair protein RadA PSEEN4770 209 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 104780469 Common ppc phosphoenolpyruvate carboxylase PSEEN1264 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 104779412 Common - efflux transporter, TerC family PSEEN0103 111 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 104782148 Common - hypothetical protein PSEEN3087 1 None None None 104783616 Common - hypothetical protein PSEEN4661 3 COG0456 RimI, Acetyltransferases General function prediction only 104780067 Common - transcriptional regulator, LysR family PSEEN0838 172 COG0583 LysR, Transcriptional regulator Transcription 104779931 Common - transcriptional regulator, TetR/AcrR family PSEEN0679 95 COG1309 AcrR, Transcriptional regulator Transcription 104779838 Common oprG outer membrane protein OprG PSEEN0578 69 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 104781180 Common - hypothetical protein PSEEN2042 10 None None None 104784238 Common ppk polyphosphate kinase PSEEN5336 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 104783271 Common - hypothetical protein PSEEN4298 1 None None None 104784055 Common rfaC ADP-heptose; LPS heptosyl transferase I PSEEN5142 86 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 104782096 Common - hypothetical protein PSEEN3033 1 None None None 104779423 Common pntAA proton-translocating NAD(P) transhydrogenase PSEEN0116 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 104782612 Common - oxidase PSEEN3588 39 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104780426 Common - lectron transport complex protein RnfB PSEEN1218 101 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 104780817 Common - hypothetical protein PSEEN1657 8 None None None 104781124 Pathogen - hypothetical protein PSEEN1985 1 None None None 104781335 Common - arginyl-tRNA-protein transferase PSEEN2209 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 104783030 Common - transcriptional regulator, AraC family PSEEN4047 144 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104783451 Common ddl D-alanine--D-alanine ligase PSEEN4483 226 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 104781788 Common - hypothetical protein PSEEN2701 1 None None None 104780753 Common htpX heat shock protein HtpX PSEEN1582 191 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 104781027 Common - hypothetical protein PSEEN1882 1 None None None 104782128 Common - Fe uptake ABC transporter, ATP-binding protein PSEEN3066 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 104779846 Common - hypothetical protein PSEEN0586 1 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 104780109 Common - hypothetical protein PSEEN0885 105 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 104782934 Common - hypothetical protein PSEEN3939 35 COG3636 COG3636, Predicted transcriptional regulator Transcription 104779496 Common - choline/glycine betaine transporter, BCCT family PSEEN0209 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 104781451 Common - hypothetical protein PSEEN2336 5 None None None 104781411 Common - cytochrome c PSEEN2293 40 COG3258 COG3258, Cytochrome c Energy production and conversion 104782104 Common - polyamine ABC transporter, ATP binding protein PSEEN3041 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104782796 Common motC flagellar motor protein PSEEN3791 119 COG1291 MotA, Flagellar motor component Cell motility and secretion 104783786 Common - translation initiation factor Sui1 PSEEN4848 83 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 104783630 Common ndh NADH dehydrogenase II PSEEN4675 180 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 104780810 Common - transcriptional regulator, LysR family PSEEN1649 193 COG0583 LysR, Transcriptional regulator Transcription 104781438 Common - hypothetical protein PSEEN2323 3 None None None 104781109 Common rplT 50S ribosomal protein L20 PSEEN1966 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 104782397 Common - hypothetical protein PSEEN3353 139 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 104782889 Common phhB pterin-4-alpha-carbinolamine dehydratase PSEEN3893 83 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 104779333 Common - lipid A biosynthesis lauroyl acyltransferase PSEEN0019 118 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 104781175 Common - oxidoreductase PSEEN2036 112 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 104779811 Pathogen - hypothetical protein PSEEN0548 1 None None None 104781417 Common - hypothetical protein PSEEN2299 41 COG3132 COG3132, Uncharacterized protein conserved in bacteria Function unknown 104784195 Common - multidrug RND transporter, membrane fusion protein PSEEN5289 150 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104779478 Common - TonB-dependent receptor PSEEN0186 113 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104781519 Common - hypothetical protein PSEEN2407 76 COG2962 RarD, Predicted permeases General function prediction only 104784139 Common - hypothetical protein PSEEN5229 41 COG1598 COG1598, Uncharacterized conserved protein Function unknown 104779350 Common trpA tryptophan synthase subunit alpha PSEEN0037 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 104780997 Common - transcriptional regulator, Cro/CI family PSEEN1850 24 COG1396 HipB, Predicted transcriptional regulators Transcription 104784322 Common - major facilitator family transporter PSEEN5423 56 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 104781400 Common - response regulator PSEEN2281 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782083 Common - hypothetical protein PSEEN3020 2 None None None 104784314 Common dadX alanine racemase PSEEN5415 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 104784221 Common - hypothetical protein PSEEN5316 22 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 104779340 Common - hypothetical protein PSEEN0027 239 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 104781239 Common - hypothetical protein PSEEN2104 1 None None None 104783024 Common - transcriptional regulator, AsnC familiy PSEEN4041 153 COG1522 Lrp, Transcriptional regulators Transcription 104783710 Common - FecR-like transmembrane sensor PSEEN4767 44 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104783937 Common - sensory box protein/response regulator (hybrid) PSEEN5017 208 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104780386 Common - transcriptional regulator, PadR family PSEEN1177 67 COG1695 COG1695, Predicted transcriptional regulators Transcription 104782795 Common motB flagellar motor protein MotD PSEEN3790 158 COG1360 MotB, Flagellar motor protein Cell motility and secretion 104783527 Common - transcriptional regulator, LysR family PSEEN4561 107 COG0583 LysR, Transcriptional regulator Transcription 104780729 Common - transport protein (MFS superfamily) PSEEN1555 65 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104784420 Common - fatty acid-CoA desaturase PSEEN5527 68 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 104782711 Common - hypothetical protein PSEEN3701 2 COG3096 MukB, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 104782544 Common - Glucose/sorbosone dehydrogenase PSEEN3507 117 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 104783576 Common - effector of murein hydrolase LgrB PSEEN4617 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 104781928 Common - Sco1/SenC family protein PSEEN2853 59 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 104781621 Pathogen - hypothetical protein PSEEN2515 1 None None None 104784329 Common dfp bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase PSEEN5432 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 104784256 Common algR alginate biosynthesis regulatory protein PSEEN5354 170 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 104783415 Common valS valyl-tRNA synthetase PSEEN4446 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104782127 Common - transcriptional regulator PSEEN3065 144 COG1733 COG1733, Predicted transcriptional regulators Transcription 104782433 Common - transcriptional regulator, Cro/CI family PSEEN3390 12 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 104779503 Common ssuE NAD(P)H-dependent FMN reductase PSEEN0217 55 COG0431 COG0431, Predicted flavoprotein General function prediction only 104781524 Common - LexA repressor PSEEN2412 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 104783693 Pathogen - hypothetical protein PSEEN4749 1 None None None 104780171 Common - deoxycytidylate deaminase PSEEN0949 69 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 104783428 Common - hypothetical protein PSEEN4459 24 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 104781441 Pathogen - hypothetical protein PSEEN2326 1 None None None 104782179 Common - dihydroorotase PSEEN3119 209 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 104780482 Common - pyridoxamine 5'-phosphate oxidase PSEEN1277 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 104781143 Common - multidrug efflux MFS membrane fusion protein PSEEN2004 113 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104784100 Common - glycine betaine/L-proline ABC transporter, periplasmic binding protein PSEEN5188 60 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 104783880 Common - hypothetical protein PSEEN4953 133 COG2860 COG2860, Predicted membrane protein Function unknown 104780602 Common nirB nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding PSEEN1418 188 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 104783692 Common - LpxA-type transferase PSEEN4748 14 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 104782182 Common - diguanylate cyclase (GGDEF domain) PSEEN3122 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104782481 Common - protein-tyrosine phosphatase; autotransporter PSEEN3441 55 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 104784225 Common - hypothetical protein PSEEN5320 1 None None None 104783919 Common - glycosyl transferase PSEEN4995 136 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104781901 Common - transcriptional regulator PSEEN2826 22 COG0583 LysR, Transcriptional regulator Transcription 104779463 Common - hypothetical protein PSEEN0170 1 None None None 104780098 Common - hypothetical protein PSEEN0873 1 None None None 104784159 Common - hypothetical protein PSEEN5249 18 None None None 104781201 Common - 2-hydroxychromene-2-carboxylate isomerase PSEEN2064 48 COG3917 NahD, 2-hydroxychromene-2-carboxylate isomerase Secondary metabolites biosynthesis, transport, and catabolism 104780002 Common lldD L-lactate dehydrogenase PSEEN0767 127 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 104780639 Common - hypothetical protein PSEEN1456 3 None None None 104779942 Common mmsA-2 methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein PSEEN0699 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104780894 Common - hypothetical protein PSEEN1741 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 104780839 Common - Xanthine/uracil permease PSEEN1681 126 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 104784357 Common - chorismate-pyruvate lyase PSEEN5461 47 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 104781713 Common - hypothetical protein PSEEN2614 43 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104779984 Pathogen - hypothetical protein PSEEN0744 1 None None None 104781141 Common - transporter, LysE family PSEEN2002 58 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104779896 Common - hypothetical protein PSEEN0640 52 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 104782160 Common - oxidoreductase; aromatic-ring hydroxylase PSEEN3099 115 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104782072 Common - hypothetical protein PSEEN3009 1 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104783753 Common - hypothetical protein PSEEN4812 1 None None None 104780090 Common - hypothetical protein PSEEN0862 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104780618 Common - ABC transporter, permease protein PSEEN1435 69 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 104782020 Common - hypothetical protein PSEEN2953 1 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104782666 Common gltA type II citrate synthase PSEEN3646 194 COG0372 GltA, Citrate synthase Energy production and conversion 104779468 Common - hypothetical protein PSEEN0175 218 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 104781153 Common - 4-hydroxyphenylpyruvate dioxygenase PSEEN2014 88 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 104781475 Pathogen - hypothetical protein PSEEN2361 1 None None None 104782237 Common - periplasmic binding protein PSEEN3182 59 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 104784178 Pathogen - hypothetical protein PSEEN5269 1 None None None 104783585 Common - hydrolase, alpha/beta fold family PSEEN4626 39 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 104781693 Common mhbD gentisate 1,2-dioxygenase PSEEN2593 30 COG3435 COG3435, Gentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104783185 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase PSEEN4210 158 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 104780459 Common prfB peptide chain release factor 2 PSEEN1254 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 104782052 Common - iron-sulfur cluster-binding protein PSEEN2987 77 COG0348 NapH, Polyferredoxin Energy production and conversion 104780694 Common - transcriptional regulator, GntR family PSEEN1516 211 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 104781294 Common - hypothetical protein PSEEN2162 1 None None None 104784368 Common pstC phosphate ABC transporter, permease protein PSEEN5472 220 COG4590 COG4590, ABC-type uncharacterized transport system, permease component General function prediction only 104779334 Common - hypothetical protein PSEEN0021 10 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 104781119 Common - hypothetical protein PSEEN1980 26 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 162139702 Common - D,D-heptose 1,7-bisphosphate phosphatase PSEEN0015 127 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 104784001 Common - methyl-accepting chemotaxis transducer PSEEN5084 155 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780399 Common gltK Glutamate-aspartate ABC transporter, permease protein PSEEN1191 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104780009 Common fur transcriptional repressor for ferric uptake PSEEN0775 184 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 104783981 Common hslV ATP-dependent protease peptidase subunit PSEEN5063 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 104782215 Common bdhA 3-hydroxybutyrate dehydrogenase PSEEN3158 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104780414 Common - peroxiredoxin (alkyl hydroperoxide reductase C) PSEEN1206 221 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 104781182 Common - glycosidase, alpha-amylase family protein PSEEN2044 96 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 104782189 Common - transporter, LysE family PSEEN3129 115 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104783065 Common - hypothetical protein PSEEN4085 96 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 104780983 Pathogen - hypothetical protein PSEEN1835 1 None None None 104784171 Common - amino acid ABC transporter, permease protein PSEEN5261 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104783670 Common sfsA sugar fermentation stimulation protein A PSEEN4724 106 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 104782608 Common - ABC transporter, periplasmic polyamine-binding protein PSEEN3584 128 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104782385 Common - transporter, LysE family PSEEN3340 42 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 104782460 Common - ABC transporter, periplasmic sulfonate-binding protein PSEEN3419 45 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104782463 Common - hypothetical protein PSEEN3422 51 COG3791 COG3791, Uncharacterized conserved protein Function unknown 104782700 Common - hypothetical protein PSEEN3687 1 None None None 104784247 Common - hypothetical protein PSEEN5345 28 COG3417 FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) General function prediction only 104783433 Common - hypothetical protein PSEEN4464 14 None None None 104783910 Common rfaE bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase PSEEN4986 150 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 104784163 Common - hypothetical protein PSEEN5253 4 None None None 104782619 Common - hypothetical protein PSEEN3596 2 None None None 104779471 Common - hypothetical protein PSEEN0178 10 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 104780667 Common mtnA methylthioribose-1-phosphate isomerase PSEEN1486 130 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 104782675 Common etfA electron transfer flavoprotein alpha-subunit PSEEN3657 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 104782838 Common flgI flagellar basal body P-ring protein PSEEN3834 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 104782844 Common flgD flagellar basal body rod modification protein PSEEN3840 119 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 104783972 Common pilH Type IV pili response regulator PilH PSEEN5054 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 104784383 Common - transcriptional regulator, AraC family PSEEN5487 76 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104781588 Common - hypothetical protein PSEEN2478 7 None None None 104782006 Common - hypothetical protein PSEEN2939 1 None None None 104782172 Common - hypothetical protein PSEEN3112 10 None None None 104784005 Common mdoH glucosyltransferase MdoH PSEEN5089 55 COG2943 MdoH, Membrane glycosyltransferase Cell envelope biogenesis, outer membrane 104782884 Common aotJ-1 arginine/ornithine periplasmic-binding protein AotJ PSEEN3887 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104779360 Common - hypothetical protein PSEEN0047 16 COG4324 COG4324, Predicted aminopeptidase General function prediction only 104779347 Common betC choline sulfatase PSEEN0034 92 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 104781247 Common - hypothetical protein PSEEN2112 4 None None None 104781155 Common - hypothetical protein PSEEN2016 9 None None None 104781581 Common - hypothetical protein PSEEN2471 8 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 104780155 Common - 1-phosphofructokinase FruK PSEEN0933 103 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 104780742 Common - hypothetical protein PSEEN1568 3 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 104781084 Common - glycosyl hydrolase, family 15 PSEEN1941 68 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 104779649 Common - potassium efflux protein KefA PSEEN0370 220 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104782103 Common - polyamine ABC transporter, permease protein PSEEN3040 199 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 104782642 Common - TonB-dependent receptor PSEEN3619 115 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 104783009 Common - peptidase, S9 family PSEEN4025 102 COG1770 PtrB, Protease II Amino acid transport and metabolism 104782872 Common - aspartate kinase PSEEN3874 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 104784218 Common - hypothetical protein PSEEN5313 18 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 104779975 Common - ribosomal protein S6 modification protein-related protein PSEEN0734 59 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 104782474 Common - hypothetical protein PSEEN3434 1 None None None 104784244 Common - cytochrome c protein PSEEN5342 53 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 104783944 Common - transcriptional regulator, ArsR family PSEEN5025 92 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 104782560 Common - hypothetical protein PSEEN3532 86 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 104779880 Common - hypothetical protein PSEEN0622 96 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 104780717 Common - cytochrome c PSEEN1543 12 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 104780800 Common uvrB excinuclease ABC subunit B PSEEN1636 225 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 104783931 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSEEN5011 32 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104780643 Common - DNA-binding response regulator, LuxR family PSEEN1460 174 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104782063 Pathogen - hypothetical protein PSEEN2999 1 None None None 104784375 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit PSEEN5479 194 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 104782853 Common - hypothetical protein PSEEN3849 2 COG5581 COG5581, Predicted glycosyltransferase Cell envelope biogenesis, outer membrane 104781734 Common - hypothetical protein PSEEN2643 12 None None None 104784450 Common rpmH 50S ribosomal protein L34 PSEEN5559 196 None None None 104784039 Common rarD-1 RarD protein PSEEN5125 95 COG2962 RarD, Predicted permeases General function prediction only 104782444 Common - bacteriophytochrome 1 PSEEN3401 222 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 104781088 Common - proteic killer suppression protein PSEEN1945 41 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 104781520 Pathogen - hypothetical protein PSEEN2408 1 None None None 104781426 Common - hypothetical protein PSEEN2309 11 COG5628 COG5628, Predicted acetyltransferase General function prediction only 104781222 Common cysS cysteinyl-tRNA synthetase PSEEN2087 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104781570 Common - Probable type II secretion system protein G PSEEN2460 74 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 104783324 Common - hypothetical protein PSEEN4352 73 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 104783295 Common - transcriptional regulator, Cro/CI family PSEEN4322 47 COG2944 COG2944, Predicted transcriptional regulator Transcription 104781102 Common - hypothetical protein PSEEN1959 1 None None None 104782295 Common - transcriptional regulator, LysR family PSEEN3244 90 COG0583 LysR, Transcriptional regulator Transcription 104782748 Common - lipid kinase PSEEN3741 88 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 104779399 Common algB alginate biosynthesis response regulator AlgB PSEEN0087 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104780199 Common - dehydrogenase PSEEN0978 217 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 104782743 Common - chemotaxis protein CheV PSEEN3735 165 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 104779354 Common - hypothetical protein PSEEN0041 38 COG3360 COG3360, Uncharacterized conserved protein Function unknown 104779523 Common - chemotaxis protein methyltransferase CheR-type PSEEN0238 150 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 104782424 Common - acetyltransferase Act PSEEN3380 59 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 104784104 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase PSEEN5192 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 104784403 Common pdxY pyridoxamine kinase PSEEN5509 63 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 104782077 Common - transcriptional regulator, LuxR family PSEEN3014 5 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104783743 Common - sensor histidine kinase PSEEN4801 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104779656 Common - hypothetical protein PSEEN0377 65 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 104784438 Common atpF F0F1 ATP synthase subunit B PSEEN5546 133 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 104780500 Common - hypothetical protein PSEEN1297 1 None None None 104783128 Common - hypothetical protein PSEEN4153 5 None None None 104781252 Common - hypothetical protein PSEEN2117 5 None None None 104784076 Common ltaE low-specificity L-threonine aldolase PSEEN5163 112 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 104779715 Common rpe ribulose-phosphate 3-epimerase PSEEN0442 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 104782925 Common - hypothetical protein PSEEN3930 39 COG3148 COG3148, Uncharacterized conserved protein Function unknown 104779591 Common - coproporphyrinogen III oxidase PSEEN0311 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 104780178 Common cyoB cytochrome o ubiquinol oxidase subunit I PSEEN0957 164 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 104781046 Common - transcriptional regulator, GntR family PSEEN1901 137 COG1802 GntR, Transcriptional regulators Transcription 104782535 Common - hypothetical protein PSEEN3498 189 COG0628 PerM, Predicted permease General function prediction only 104783599 Common - methylenetetrahydrofolate reductase PSEEN4641 9 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 104779632 Common - hypothetical protein PSEEN0353 37 COG4258 COG4258, Predicted exporter General function prediction only 104782716 Common - Lipoprotein releasing system transmembrane protein LolE PSEEN3706 180 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 104780283 Common aroP aromatic amino acid transporter, APC family PSEEN1067 161 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104783246 Common - type II secretion system protein M PSEEN4273 1 None None None 104780751 Common - aromatic ring-opening dioxygenase PSEEN1580 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 104780625 Common - putative aminopeptidase 2 PSEEN1442 44 COG1362 LAP4, Aspartyl aminopeptidase Amino acid transport and metabolism 104781271 Common - ABC transporter with duplicated ATPase domain PSEEN2138 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 104782185 Common mexC multidrug efflux RND membrane fusion protein MexC PSEEN3125 146 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 104779651 Common betA choline dehydrogenase PSEEN0372 90 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 104779794 Common - sigma-54 dependent transcriptional regulator PSEEN0529 169 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 104781611 Common basA/D non-ribosomal peptide synthetase BasA/D PSEEN2503 213 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104781096 Common - ribose ABC transporter, ATP-binding protein RbsA PSEEN1953 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 104780229 Common iscS-1 cysteine desulfurase PSEEN1010 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 104779437 Common - type I toxin efflux outer membrane protein TolC PSEEN0143 124 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104782365 Common - lipoprotein PSEEN3318 1 None None None 104783503 Common alg44 alginate biosynthesis protein Alg44 PSEEN4537 3 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104783535 Common - hypothetical protein PSEEN4569 40 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 104780073 Common ada O6-methylguanine-DNA methyltransferase PSEEN0845 207 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 104784048 Common - hypothetical protein PSEEN5135 41 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 104779910 Common - sensory box histidine kinase PSEEN0656 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 104783001 Common - allophanate hydrolase subunit 2 PSEEN4016 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 104781008 Common folD bifunctional protein Includes: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase PSEEN1862 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 104781958 Common - transcriptional regulator, LuxR family PSEEN2887 39 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104783491 Common aapQ general amino acid ABC transporter, permease protein PSEEN4524 170 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104779765 Common rplN 50S ribosomal protein L14 PSEEN0500 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 104783848 Common - branched-chain amino acid ABC transporter, permease protein PSEEN4915 152 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 104781796 Common - hypothetical protein PSEEN2709 143 COG1733 COG1733, Predicted transcriptional regulators Transcription 104781869 Common paaC 3-hydroxybutyryl-CoA dehydrogenase PSEEN2793 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 104781948 Common - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) PSEEN2876 178 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104782750 Common - glycosyl transferase PSEEN3743 73 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 104783913 Common - toluene tolerance protein Ttg8 PSEEN4989 4 None None None 104782597 Pathogen - hypothetical protein PSEEN3571 1 None None None 104781070 Common - ABC transporter, permease protein PSEEN1926 184 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 104781579 Common - SAM-dependent methyltransferase PSEEN2469 12 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 104782470 Common - hypothetical protein PSEEN3429 15 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104781319 Common - Porphyromonas-type peptidyl-arginine deiminase PSEEN2191 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 104779683 Pathogen - hypothetical protein PSEEN0409 1 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 104779803 Common - hemolysin co-regulated protein 1B PSEEN0539 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 104780409 Common argI ornithine carbamoyltransferase PSEEN1201 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 104784149 Common nudH dinucleoside polyphosphate hydrolase PSEEN5239 115 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 104780448 Common - ABC transporter, ATP-binding protein PSEEN1241 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 104781250 Common - thiamine pyrophosphate PSEEN2115 216 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 104779596 Common - hypothetical protein PSEEN0316 120 COG0762 COG0762, Predicted integral membrane protein Function unknown 104783045 Common - lipoprotein PSEEN4063 31 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 104780120 Common - hypothetical protein PSEEN0896 1 None None None 104784140 Common - hypothetical protein PSEEN5230 39 COG1724 COG1724, Predicted periplasmic or secreted lipoprotein Cell motility and secretion 104780330 Common - lipoprotein PSEEN1116 22 COG3489 COG3489, Predicted periplasmic lipoprotein General function prediction only 104781785 Common - insecticidal toxin, SepC/Tcc class PSEEN2697 43 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 104779383 Common znuB Zinc ABC transporter, permease protein PSEEN0070 147 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 104782211 Common - ABC transporter, permease protein PSEEN3153 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 104781488 Common - multidrug transport protein (MFS superfamily) PSEEN2375 142 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104781626 Common - 6-pyruvoyl-tetrahydropterin synthase-like PSEEN2520 57 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 104781941 Common - transcriptional regulator, luxR family PSEEN2869 41 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 104782283 Common - pyoverdine sidechain peptide synthetase PSEEN3232 211 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104784233 Common - CDP-6-deoxy-delta-3,4-glucoseen reductase PSEEN5329 84 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 104782015 Common - hypothetical protein PSEEN2948 1 None None None 104783372 Common - hypothetical protein PSEEN4402 6 None None None 104779924 Common - copper-binding protein PSEEN0671 43 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 104783637 Common - oxidoreductase, FAD-binding PSEEN4683 152 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104781120 Pathogen - hypothetical protein PSEEN1981 4 None None None 104782655 Common - hypothetical protein PSEEN3632 27 COG3821 COG3821, Predicted membrane protein Function unknown 104784254 Common hemD uroporphyrinogen-III synthase PSEEN5352 93 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 104783050 Common - hypothetical protein PSEEN4069 92 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 104783461 Common mraW S-adenosyl-methyltransferase MraW PSEEN4493 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 104779730 Common - oxidoreductase, short chain dehydrogenase/reductase family PSEEN0457 220 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 104780781 Common rpmF 50S ribosomal protein L32 PSEEN1615 84 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 104783159 Common - pyocin R2_PP, holin PSEEN4184 1 None None None 104780771 Common - hypothetical protein PSEEN1604 100 COG2835 COG2835, Uncharacterized conserved protein Function unknown 104782378 Common - hypothetical protein PSEEN3331 7 None None None 104783587 Common - transcriptional regulator, LysR family PSEEN4628 158 COG0583 LysR, Transcriptional regulator Transcription 104782402 Common - hypothetical protein PSEEN3358 7 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104782132 Common - DNA-binding response regulator, LuxR family PSEEN3070 177 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 104783254 Common - type II secretion system protein D PSEEN4281 141 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 104781645 Pathogen - hypothetical protein PSEEN2541 1 None None None 104783904 Common waaA 3-deoxy-D-manno-octulosonic-acid transferase PSEEN4980 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 104783166 Common pcm protein-L-isoaspartate O-methyltransferase PSEEN4191 156 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 104784030 Common - hypothetical protein PSEEN5116 1 None None None 104782578 Common - hypothetical protein PSEEN3550 3 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 104781753 Common - amino acid ABC transporter, permease protein PSEEN2665 171 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 104779776 Common rpmJ 50S ribosomal protein L36 PSEENCDS526601D 139 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 104782840 Common flgG flagellar basal body rod protein FlgG PSEEN3836 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 104779391 Common - cytochrome c-type protein PSEEN0079 44 COG3245 CycB, Cytochrome c5 Energy production and conversion 104781461 Common - ABC transporter, periplasmic binding protein PSEEN2347 66 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 104783949 Common - outer membrane-bound lytic murein transglycolase A PSEEN5030 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 104784126 Common - transcriptional regulator, Cro/CI family PSEEN5216 51 COG3655 COG3655, Predicted transcriptional regulator Transcription 104783845 Common - oxidoreductase, short chain dehydrogenase/reductase family PSEEN4911 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 104780809 Common - sensory box/GGDEF domain/EAL domain protein PSEEN1648 198 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104783127 Common - pyocin R2_PP, tail length determination protein PSEEN4152 1 COG3941 COG3941, Mu-like prophage protein General function prediction only 104780592 Common - acyltransferase PSEEN1408 161 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104780691 Common - short chain dehydrogenase PSEEN1512 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104783137 Common gpW pyocin R2_PP, baseplate protein PSEEN4162 37 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 104782241 Common glcD glycolate oxidase subunit GlcD PSEEN3186 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 104782029 Pathogen - hypothetical protein PSEEN2962 1 None None None 104782058 Common - transcriptional regulator, MarR family PSEEN2994 137 COG1846 MarR, Transcriptional regulators Transcription 104782483 Common - hypothetical protein PSEEN3443 3 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 104779583 Common ftsX Cell division protein FtsX PSEEN0302 121 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 104782975 Pathogen - hypothetical protein PSEEN3985 1 None None None 104783469 Common sspB ClpXP protease specificity-enhancing factor PSEEN4501 65 COG2969 SspB, Stringent starvation protein B General function prediction only 104781880 Common phaK phenylacetic acid-specific porin PSEEN2805 9 None None None 104781018 Common - Patatin-like phospholipase PSEEN1873 120 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 104781887 Common - hypothetical protein PSEEN2812 5 None None None 104783994 Common hisI phosphoribosyl-AMP cyclohydrolase PSEEN5076 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 104783086 Common dinP DNA polymerase IV PSEEN4107 184 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 104784029 Common - acyl-CoA dehydrogenase PSEEN5115 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104781117 Common - DNA helicases, SNF2 family PSEEN1977 132 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 104779584 Common rpoH RNA polymerase factor sigma-32 PSEEN0303 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 104780135 Common - response regulator/TPR domain protein PSEEN0912 96 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104782274 Common - hypothetical protein PSEEN3222 94 COG1262 COG1262, Uncharacterized conserved protein Function unknown 104779376 Common - cytochrome oxidase assembly protein PSEEN0063 37 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 104781833 Common - hypothetical protein PSEEN2751 1 None None None 104782833 Common - glycosyltransferase PSEEN3829 43 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 104781067 Common - acyl-CoA dehydrogenase PSEEN1923 71 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104782141 Common - DNase with DNase I-like domain PSEEN3079 64 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 104780966 Common - thiol:disulfide interchange protein dsbE PSEEN1817 157 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 104782847 Common - exoprotein with autotransporter precursor PSEEN3843 50 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 104781381 Common - transporter, sodium:sulfate symporter family PSEEN2261 140 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 104784265 Common cyaY frataxin-like protein PSEEN5363 36 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 104779959 Common ggt gamma-glutamyltranspeptidase PSEEN0716 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 104779325 Common - transcriptional regulator, LysR family PSEEN0010 157 COG0583 LysR, Transcriptional regulator Transcription 104782989 Common - ribonuclease BN PSEEN4004 142 COG1295 Rbn, Predicted membrane protein Function unknown 104780578 Common - transcriptional regulator, MarR family PSEEN1389 44 COG1846 MarR, Transcriptional regulators Transcription 104780975 Common - formate dehydrogenase subunit gamma PSEEN1826 140 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 104779623 Common - lipoprotein PSEEN0344 13 None None None 104780538 Common - hypothetical protein PSEEN1349 24 None None None 104779510 Common gshA glutamate--cysteine ligase PSEEN0224 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 104781596 Pathogen - hypothetical protein PSEEN2487 1 None None None 104782677 Common - electron transfer flavoprotein-ubiquinone oxidoreductase PSEEN3660 108 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 104780085 Common prs ribose-phosphate pyrophosphokinase PSEEN0857 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 104783481 Common - hypothetical protein PSEEN4513 5 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 104781288 Common - amidase family protein PSEEN2156 219 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 104783704 Common - luciferase-like monooxygenase PSEEN4761 67 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104779944 Common - hypothetical protein PSEEN0701 7 None None None 104782541 Common - hypothetical protein PSEEN3504 88 COG1238 COG1238, Predicted membrane protein Function unknown 104783468 Common - hypothetical protein PSEEN4500 4 None None None 104780350 Common - beta-lactamase PSEEN1139 75 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 104780043 Common gdhA glutamate dehydrogenase PSEEN0812 174 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 104782031 Common nfrB bacteriophage N4 adsorption protein B PSEEN2964 15 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104781689 Common - short chain dehydrogenase PSEEN2589 202 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104784024 Common - hypothetical protein PSEEN5109 34 COG0401 COG0401, Uncharacterized homolog of Blt101 Function unknown 104782411 Common - transcriptional regulator, LysR family PSEEN3367 177 COG0583 LysR, Transcriptional regulator Transcription 104781967 Common panB-2 3-methyl-2-oxobutanoate hydroxymethyltransferase PSEEN2896 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 104782322 Common - hypothetical protein PSEEN3274 28 COG5572 COG5572, Predicted integral membrane protein Function unknown 104783376 Common hexR DNA-binding transcriptional regulator HexR PSEEN4406 97 COG1737 RpiR, Transcriptional regulators Transcription 104780046 Common - hypothetical protein PSEEN0815 21 None None None 104780923 Common - hypothetical protein PSEEN1772 73 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 104781327 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PSEEN2200 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 104780456 Common - chemotaxis-specific methylesterase PSEEN1250 196 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 104781972 Common - oxidoreductase PSEEN2901 132 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104779840 Common - ABC efflux transporter, permease protein PSEEN0580 30 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 104780947 Common - copper-transporting P-type ATPase CcoI PSEEN1796 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 104780544 Common - thioredoxin PSEEN1355 136 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 104783315 Common - hypothetical protein PSEEN4343 99 COG3177 COG3177, Uncharacterized conserved protein Function unknown 104783807 Common cobH precorrin-8X methylmutase PSEEN4870 118 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 104784011 Common - amino acid transporter PSEEN5095 179 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 104781536 Common - sensor histidine kinase/response regulator PSEEN2424 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104782732 Common - hypothetical protein PSEEN3723 3 None None None 104780675 Common wzz O-antigen chain length regulator protein (Wzz) PSEEN1495 12 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 104783654 Common - putative sulfite oxidase subunit YedY PSEEN4707 116 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 104782585 Common - arginine/lysine/ornithine decarboxylase PSEEN3557 87 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 104781241 Common - hypothetical protein PSEEN2106 4 None None None 104783068 Common tolA biopolymer transport protein TolA PSEEN4088 9 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 104784155 Common - hypothetical protein PSEEN5245 9 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 104784115 Common - hypothetical protein PSEEN5204 1 None None None 104782267 Pathogen - hypothetical protein PSEEN3215 1 None None None 104782353 Common arsR arsenic resistance transcriptional regulator PSEEN3306 147 COG0640 ArsR, Predicted transcriptional regulators Transcription 104784074 Common soxB sarcosine oxidase beta subunit PSEEN5161 125 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104779967 Common tesB acyl-CoA thioesterase II PSEEN0725 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 104784290 Common - hypothetical protein PSEEN5390 49 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 104781474 Common - hypothetical protein PSEEN2360 93 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 104784293 Common - transcriptional regulator, LysR family PSEEN5393 160 COG0583 LysR, Transcriptional regulator Transcription 104781560 Common - glycosyl transferase, group 2 family protein PSEEN2450 60 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104782982 Pathogen - hypothetical protein PSEEN3996 1 None None None 104779987 Common - efflux outer membrane protein PSEEN0747 49 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104781715 Common - NADH dehydrogenase, PNDR family PSEEN2617 188 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 104781676 Common - transcriptional regulator, LysR family PSEEN2573 92 COG0583 LysR, Transcriptional regulator Transcription 104782270 Common pbpG D-alanyl-D-alanine endopeptidase PSEEN3218 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 104783326 Common - transcriptional regulator, LysR family PSEEN4354 175 COG0583 LysR, Transcriptional regulator Transcription 104782950 Common - transcritional regulator, LysR family PSEEN3957 183 COG0583 LysR, Transcriptional regulator Transcription 104781893 Common - hypothetical protein PSEEN2818 4 None None None 104782944 Common - ATP-dependent RNA helicase, DEAD box family PSEEN3951 241 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 104781618 Pathogen - hypothetical protein PSEEN2510 1 None None None 104783736 Common - Cation efflux protein PSEEN4794 190 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 104783397 Common arcA arginine deiminase PSEEN4428 57 COG2235 ArcA, Arginine deiminase Amino acid transport and metabolism 104781403 Common modC molybdate ABC transporter, ATP-binding protein PSEEN2284 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 104782043 Common - hypothetical protein PSEEN2976 104 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 104779505 Common ssuD alkanesulfonate monooxygenase PSEEN0219 85 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 104783362 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein PSEEN4392 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 104783207 Common dapE succinyl-diaminopimelate desuccinylase PSEEN4232 200 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 104782449 Common cysI Ferredoxin-nitrite reductase PSEEN3407 147 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 104779418 Common - hypothetical protein PSEEN0111 3 None None None 104781686 Common - aldehyde dehydrogenase PSEEN2586 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104783895 Common parE DNA topoisomerase IV subunit B PSEEN4969 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 104783822 Pathogen - hypothetical protein PSEEN4886 1 None None None 104779851 Common ribH riboflavin synthase subunit beta PSEEN0591 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 104781308 Common - hypothetical protein PSEEN2178 18 COG3619 COG3619, Predicted membrane protein Function unknown 104782110 Common - hypothetical protein PSEEN3047 12 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 104783794 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit PSEEN4856 177 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 104782893 Common - oxidase, FAD-binding PSEEN3897 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 104781776 Common - hypothetical protein PSEEN2688 17 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104782911 Common - hypothetical protein PSEEN3915 16 COG4341 COG4341, Predicted HD phosphohydrolase General function prediction only 104781568 Common - diguanylate cyclase (GGDEF) domain PSEEN2458 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 104783278 Common - tricarboxylate transport protein TctC PSEEN4305 74 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 104780429 Common - ATPase, Mrp family PSEEN1221 230 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 104783266 Common mucD serine protease MucD PSEEN4293 224 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 104782943 Common - hypothetical protein PSEEN3950 10 COG2929 COG2929, Uncharacterized protein conserved in bacteria Function unknown 104782961 Common hrpA ATP-dependent helicase PSEEN3969 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 104784287 Pathogen - hypothetical protein PSEEN5386 1 None None None 104779876 Common - FecR-like transmembrane sensor PSEEN0618 44 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104782202 Common benB benzoate 1,2-dioxygenase beta subunit PSEEN3142 28 COG5517 COG5517, Small subunit of phenylpropionate dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 104779524 Pathogen - hypothetical protein PSEEN0239 1 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 104782341 Common - hypothetical protein PSEEN3293 1 None None None 104782739 Common - universal stress protein family PSEEN3731 113 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 104783798 Common - Dihydrouridine synthase TIM-barrel protein nifR3 PSEEN4861 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 104779847 Common - hypothetical protein PSEEN0587 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 104781918 Common - secretion type II protein related to gspD (secretin) protein. PSEEN2843 139 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 104779904 Common - type II/IV secretion system membrane protein PSEEN0650 28 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 104780339 Common xenB xenobiotic reductase B PSEEN1127 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 104779707 Common - DnaJ-like co-chaperone PSEEN0434 51 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 104779363 Common prlC oligopeptidase A PSEEN0050 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 104779768 Common rpsN 30S ribosomal protein S14 PSEEN0503 202 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 104784422 Common - cytochrome P450 PSEEN5529 77 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 104780827 Common pykF pyruvate kinase PSEEN1668 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 104781665 Common - MipA family protein PSEEN2561 13 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 104783643 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PSEEN4689 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 104780362 Common mvaT transcriptional regulator MvaT, P16 subunit PSEEN1151 4 None None None 104783356 Common - hypothetical protein PSEEN4385 50 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 104784372 Common - aldose 1-epimerase PSEEN5476 54 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 104783875 Common amiC N-acetylmuramoyl-L-alanine amidase PSEEN4946 179 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 104780265 Common - periplasmic polyamine-binding protein PSEEN1048 131 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 104783439 Common panE 2-dehydropantoate 2-reductase PSEEN4470 113 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 104782259 Common - sensor histidine kinase/response regulator (hybrid) PSEEN3205 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104780728 Common aprF Alkaline protease (aprA) secretion protein aprF PSEEN1554 119 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104782558 Common soxR transcriptional activator for superoxide response; Fe-S center for redox-sensing (MerR family) PSEEN3530 94 COG0789 SoxR, Predicted transcriptional regulators Transcription 104779741 Common tufB elongation factor Tu PSEEN0475 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 104779991 Common - transport protein, MFS superfamily PSEEN0751 138 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104780127 Common - Zinc-dependent peptidase, M48 family PSEEN0904 128 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 104782306 Common - allantoate amidohydrolase PSEEN3255 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 104784022 Common glgP glycogen phosphorylase PSEEN5107 144 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 104780411 Common - hypothetical protein PSEEN1203 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 104783676 Common cbrB response regulator CbrB PSEEN4730 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 104779621 Common - transcriptional regulator, LysR family PSEEN0342 192 COG0583 LysR, Transcriptional regulator Transcription 104783339 Pathogen - hypothetical protein PSEEN4368 1 None None None 104782118 Common - hypothetical protein PSEEN3055 1 None None None 104783781 Common - hypothetical protein PSEEN4843 3 None None None 104780377 Common pcaD 3-oxoadipate enol-lactonase II (Beta-ketoadipate enol-lactone hydrolase II) PSEEN1168 113 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104782570 Common - methyl-accepting chemotaxis protein PSEEN3542 135 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104783022 Common - hypothetical protein PSEEN4038 1 None None None 104779993 Common - hypothetical protein PSEEN0754 25 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 104783641 Common - hypothetical protein PSEEN4687 3 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 104780358 Common pykA pyruvate kinase PSEEN1147 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 104783635 Common - competence lipoprotein ComL PSEEN4681 122 COG4105 ComL, DNA uptake lipoprotein General function prediction only 104781296 Common - FAD-dependant oxidoreductase PSEEN2164 121 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104779441 Common - ABC transporter, periplasmic binding protein PSEEN0147 20 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 104780251 Common - hypothetical protein PSEEN1033 1 None None None 104779748 Common rpoB DNA-directed RNA polymerase subunit beta PSEEN0482 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 104781989 Common - amino acid permease PSEEN2919 145 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 104782525 Common nuoF NADH dehydrogenase I subunit F PSEEN3488 170 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 104781591 Common - short-chain fatty acid transporter (scFAT family) PSEEN2481 39 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 104783688 Common rmlA-2 dTDP-glucose pyrophosphorylase PSEEN4744 231 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 104782624 Common cynR DNA-binding transcriptional regulator CynR PSEEN3601 193 COG0583 LysR, Transcriptional regulator Transcription 104784268 Common dapF diaminopimelate epimerase PSEEN5366 200 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 104781811 Pathogen - hypothetical protein PSEEN2724 1 None None None 104781763 Common mdtC multidrug resistance efflux pump PSEEN2675 178 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104782557 Common - hypothetical protein PSEEN3529 1 None None None 104780238 Common pilF type IV pili biogenesis protein PilF PSEEN1019 106 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 104780829 Common glxR tartronic semialdehyde reductase PSEEN1670 168 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 104781265 Common - tartrate dehydrogenase PSEEN2132 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 104781842 Common - oxidoreductase PSEEN2760 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 104779482 Common - response regulator PSEEN0192 46 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 104782074 Common - hypothetical protein PSEEN3011 146 COG1741 COG1741, Pirin-related protein General function prediction only 104783264 Common lepB leader peptidase (signal peptidase I) , serine protease PSEEN4291 209 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 104784344 Common - endoribonuclease L-PSP PSEEN5448 188 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 104781328 Common - hydrolase, Nudix family PSEEN2201 54 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104781133 Common mltR transcriptional activator MltR PSEEN1994 144 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104780733 Common - hypothetical protein PSEEN1559 14 COG0782 GreA, Transcription elongation factor Transcription 104781774 Common - hypothetical protein PSEEN2686 25 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 104782315 Pathogen - hypothetical protein PSEEN3266 1 None None None 104781336 Common aat leucyl/phenylalanyl-tRNA--protein transferase PSEEN2210 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 104782734 Common topA DNA topoisomerase I PSEEN3725 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 104779679 Common - amino oxydase PSEEN0401 18 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 104781745 Common - ketoglutarate semialdehyde dehydrogenase PSEEN2655 45 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 104782346 Common - hypothetical protein PSEEN3298 1 COG3313 COG3313, Predicted Fe-S protein General function prediction only 104780837 Common - hypothetical protein PSEEN1679 17 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 104782721 Common sthA soluble pyridine nucleotide transhydrogenase PSEEN3711 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 104779328 Common hdtS N-acylhomoserine lactone synthase PSEEN0014 188 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 104783865 Common - iron ABC transporter, permease protein PSEEN4936 212 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 104780866 Common - serine/threonine protein phosphatase PSEEN1709 54 None None None 104781847 Common - acyl-CoA dehydrogenase PSEEN2765 19 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 104780630 Common - lipid A biosynthesis lauroyl acyltransferase PSEEN1447 107 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 104780557 Common - hypothetical protein PSEEN1368 19 None None None 104781372 Common - hypothetical protein PSEEN2251 1 None None None 104782686 Common dat diaminobutyrate--2-oxoglutarate aminotransferase PSEEN3669 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 104779407 Common - ABC transporter, ATP-binding protein PSEEN0097 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 104780106 Common - transcriptional regulator, MerR family PSEEN0882 58 COG0789 SoxR, Predicted transcriptional regulators Transcription 104781263 Common - dioxygenase, alpha subunit PSEEN2130 88 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 104783148 Common - hypothetical protein PSEEN4173 3 None None None 104781598 Common - penicillin-binding protein 2 PSEEN2489 206 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 104779410 Common - metalloprotease, M16 family PSEEN0100 139 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 104781187 Common - hypothetical protein PSEEN2050 2 None None None 104783169 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PSEEN4194 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 104783230 Common rplS 50S ribosomal protein L19 PSEEN4257 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 104784428 Common - polyketide synthase; acyl-CoA ligase PSEEN5535 211 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 104781360 Common - hypothetical protein PSEEN2236 1 None None None 104783199 Common - hypothetical protein PSEEN4224 5 None None None 104780948 Common - hypothetical protein PSEEN1797 21 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 104779874 Common - hypothetical protein PSEEN0616 25 COG3541 COG3541, Predicted nucleotidyltransferase General function prediction only 104780505 Common - transcriptional regulator, LysR family PSEEN1302 165 COG0583 LysR, Transcriptional regulator Transcription 104780537 Common - hypothetical protein PSEEN1348 26 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 104782638 Common - hypothetical protein PSEEN3615 1 None None None 104779454 Common algP Alginate regulatory protein AlgP PSEEN0161 1 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 104783117 Common - phage tail protein PSEEN4142 9 None None None 104781029 Common - hypothetical protein PSEEN1884 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 104780815 Common - hypothetical protein PSEEN1655 57 COG3791 COG3791, Uncharacterized conserved protein Function unknown 104783816 Common - hypothetical protein PSEEN4879 1 None None None 104780696 Common - benzoate membrane transport protein (MFS superfamily) PSEEN1518 60 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 104780065 Common - ribosomal-protein-alanine acetyltransferase RimI PSEEN0835 196 COG0456 RimI, Acetyltransferases General function prediction only 104780842 Common - hypothetical protein PSEEN1684 42 COG3195 COG3195, Uncharacterized protein conserved in bacteria Function unknown 104780372 Common catI 3-oxoadipate:succinyl-CoA transferase, subunit A PSEEN1163 47 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 104784165 Common - hypothetical protein PSEEN5255 5 None None None 104783440 Common - sensory box histidine kinase/response regulator (hybrid) PSEEN4472 219 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 104779610 Common pilN type IV pili biogenesis protein PilN PSEEN0331 4 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 104782901 Common ispZ intracellular septation protein A PSEEN3905 88 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 104781450 Common - transcriptional regulator, AraC family PSEEN2335 130 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104782454 Common - transporter, MFS superfamily PSEEN3412 161 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 104783151 Common - phage protein; peptidase PSEEN4176 17 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 104779426 Common - L-carnitine dehydratase/bile acid-inducible protein F PSEEN0121 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 104782328 Common atoJ-2 Arginine/ornithine ABC transporter, periplasmic binding protein PSEEN3280 170 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104782468 Common - ABC transporter, ATP-binding and membrane protein PSEEN3427 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104783542 Common - hypothetical protein PSEEN4576 1 COG3878 COG3878, Uncharacterized protein conserved in bacteria Function unknown 104781836 Common - hypothetical protein PSEEN2754 24 None None None 104783912 Common - lipopolysaccharide core biosynthesis protein PSEEN4988 2 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 104780274 Common - porin, OprD family PSEEN1058 15 None None None 104780101 Common hemK Methylase of polypeptide chain release factors PSEEN0877 212 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 104782661 Common kgd alpha-ketoglutarate decarboxylase PSEEN3640 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 104781882 Common - hypothetical protein PSEEN2807 3 None None None 104782143 Common - hypothetical protein PSEEN3081 51 COG0392 COG0392, Predicted integral membrane protein Function unknown 104782762 Common - CAAX amino terminal protease PSEEN3757 14 None None None 104783364 Common - hypothetical protein PSEEN4394 2 None None None 104780515 Common - hypothetical protein PSEEN1320 23 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 104783342 Common - hypothetical protein PSEEN4371 14 COG5513 COG5513, Predicted secreted protein Function unknown 104784061 Common msrA methionine sulfoxide reductase A PSEEN5148 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 104781936 Common - transposase, IS256 family PSEEN2864 88 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 104781651 Common - oxidoreductase PSEEN2547 116 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 104780576 Common cobS cobalamin synthase PSEEN1387 12 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 104780910 Common - sensory box protein PSEEN1758 191 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 104782999 Common - ATPase, AAA family PSEEN4014 99 COG0714 COG0714, MoxR-like ATPases General function prediction only 104782769 Common - hypothetical protein PSEEN3764 2 COG5393 COG5393, Predicted membrane protein Function unknown 104780973 Common - glutathionylspermidine synthase PSEEN1824 54 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 104783661 Common mrcB penicillin-binding protein 1B PSEEN4715 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 104781379 Common - hypothetical protein PSEEN2259 109 COG0730 COG0730, Predicted permeases General function prediction only 104780904 Common nasA nitrate transporter PSEEN1752 96 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 104782405 Common - Glycosyl transferase, group 2 family PSEEN3361 182 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 104782778 Common - hypothetical protein PSEEN3773 1 None None None 104781889 Common cpo non-heme chloroperoxidase PSEEN2814 141 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 104783437 Common - ion small-conductance mechanosensitive channel PSEEN4468 202 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 104780146 Common trxB thioredoxin reductase PSEEN0924 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 104781057 Common - hypothetical protein PSEEN1913 3 COG3212 COG3212, Predicted membrane protein Function unknown 104779369 Common coxB cytochrome c oxidase, subunit II PSEEN0056 155 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 104783967 Common - hemolysin III PSEEN5049 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 104779577 Common - hydrolase, alpha/beta superfamily PSEEN0296 71 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 104783229 Common - long-chain acyl-CoA thioester hydrolase PSEEN4256 135 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 104783110 Common - Mu-like phage tail fiber protein PSEEN4135 4 None None None 104783348 Common - hypothetical protein PSEEN4377 1 None None None 104780658 Common - hypothetical protein PSEEN1477 107 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 104784204 Common - glutamine synthetase PSEEN5299 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 104783812 Common - virulence-assiciated protein MvpT PSEEN4875 22 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 104779789 Common - hypothetical protein PSEEN0524 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 104783549 Pathogen - hypothetical protein PSEEN4583 1 None None None 104780291 Common mreC rod shape-determining protein MreC PSEEN1075 147 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 104782224 Common - hypothetical protein PSEEN3167 17 None None None 104783473 Common petA ubiquinol--cytochrome c reductase, iron-sulfur subunit PSEEN4505 93 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 104779331 Common glyQ glycyl-tRNA synthetase subunit alpha PSEEN0017 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 104779913 Common - lipoprotein PSEEN0659 2 None None None 104783735 Common - hypothetical protein PSEEN4793 4 None None None 104783761 Common lipB lipoyltransferase PSEEN4820 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 104780294 Common cafA ibonuclease G PSEEN1078 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 104781695 Common mhbI maleylpyruvate isomerase PSEEN2595 101 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104783214 Common - hypothetical protein PSEEN4239 25 None None None 104779617 Common gltD glutamate synthase subunit beta PSEEN0338 193 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 104783104 Common recA recombinase A PSEEN4128 215 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 104783011 Pathogen - hypothetical protein PSEEN4027 1 None None None 104781342 Common cysG Siroheme synthase PSEEN2217 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 104780685 Common - glycosyl transferase WbpL PSEEN1505 178 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 104782162 Common - DNA-binding transcriptional dual regulator PSEEN3101 79 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 104782499 Common - alginate biosynthesis protein AlgX-like PSEEN3461 3 None None None 104780888 Pathogen - hypothetical protein PSEEN1733 1 None None None 104780651 Common - asparagine synthetase AsnB PSEEN1469 158 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 104781674 Common - ring-cleaving dioxygenase PSEEN2571 28 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 104782996 Common - hypothetical protein PSEEN4011 32 None None None 104783515 Pathogen - hypothetical protein PSEEN4549 1 None None None 104780881 Common - hypothetical protein PSEEN1726 43 None None None 104781974 Common - hypothetical protein PSEEN2903 24 COG4737 COG4737, Uncharacterized protein conserved in bacteria Function unknown 104783628 Common - hypothetical protein PSEEN4673 1 None None None 104782516 Common fusA elongation factor G PSEEN3478 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 104780207 Common - hypothetical protein PSEEN0986 1 None None None 104781531 Common - hypothetical protein PSEEN2419 1 None None None 104781791 Common - hypothetical protein PSEEN2704 68 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 104782532 Common nuoM NADH dehydrogenase subunit M PSEEN3495 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 104783141 Common - phage protein PSEEN4166 4 None None None 104780062 Common - hypothetical protein PSEEN0832 6 None None None 104784085 Common - electron transfer flavoprotein, beta subunit PSEEN5173 24 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 104781986 Common - multidrug efflux protein, MATE family PSEEN2915 133 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 104783992 Common - hypothetical protein PSEEN5074 36 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 104782680 Common - RNA polymerase sigma factor PSEEN3663 107 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104779562 Common - hypothetical protein PSEEN0280 10 None None None 104781852 Common - hypothetical protein PSEEN2771 1 None None None 104780956 Common ccoO-1 cytochrome c oxidase, cbb3-type, subunit II PSEEN1806 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 104781603 Common bauE ferric siderophore ABC transporter, ATP-binding protein BauE PSEEN2494 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 104783700 Common - multidrug efflux RND transporter PSEEN4757 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104780087 Common lolB outer membrane lipoprotein LolB PSEEN0859 54 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 104781151 Common - outer membrane ferric siderophore receptor PSEEN2012 126 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 104782668 Common - hypothetical protein PSEEN3648 36 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 104781196 Common - nicotinamidase PSEEN2059 83 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 104779634 Common - thioesterase; 4-hydroxybenzoyl-CoA thioesterase domain protein PSEEN0355 45 COG0824 FcbC, Predicted thioesterase General function prediction only 104784157 Common - FAD/FMN-containing dehydrogenase PSEEN5247 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 104779920 Common - methyl-accepting chemotaxis transducer PSEEN0666 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104781167 Common - hydrolase, MutT/nudix family PSEEN2028 135 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104782702 Common - hypothetical protein PSEEN3690 1 COG4907 COG4907, Predicted membrane protein Function unknown 104784305 Common - methyl-accepting chemotaxis transducer PSEEN5406 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104779872 Common - hypothetical protein PSEEN0614 84 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 104782235 Pathogen - hypothetical protein PSEEN3179 1 None None None 104783771 Common proA gamma-glutamyl phosphate reductase PSEEN4830 191 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 104780611 Common - transcriptional regulator, Cro/CI family PSEEN1428 1 COG1396 HipB, Predicted transcriptional regulators Transcription 104781245 Common - type II secretion system protein J PSEEN2110 20 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 104782059 Common - transmembrane sensor, FecR family PSEEN2995 48 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104782075 Common benR benABC operon transcriptional activator BenR PSEEN3012 85 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 104779909 Common - hypothetical protein PSEEN0655 2 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 104782510 Common - hypothetical protein PSEEN3472 22 COG5496 COG5496, Predicted thioesterase General function prediction only 104784325 Common rpmG 50S ribosomal protein L33 PSEEN5426 142 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 104780038 Common - cobalamin synthesis protein/P47K family protein PSEEN0805 126 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 104782334 Common - tautomerase PSEEN3286 32 None None None 104782786 Common ccmB heme ABC export system, permease protein CcmB PSEEN3781 59 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 104780520 Common - hypothetical protein PSEEN1326 10 COG1620 LldP, L-lactate permease Energy production and conversion 104782860 Common lpdV dihydrolipoamide dehydrogenase PSEEN3856 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 104781850 Common - hypothetical protein PSEEN2768 1 None None None 104784355 Common rubB Rubredoxin-NAD(+) reductase PSEEN5459 216 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 104781218 Common - penicillin amidase PSEEN2083 64 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 104780582 Common - hypothetical protein PSEEN1394 4 None None None 104781860 Common - hypothetical protein PSEEN2782 4 None None None 104782390 Common - hypothetical protein PSEEN3345 6 None None None 104783401 Common - sigma-54 dependent transcriptional regulator PSEEN4432 171 COG3283 TyrR, Transcriptional regulator of aromatic amino acids metabolism Transcription / Amino acid transport and metabolism 104783959 Common - periplasmic binding protein PSEEN5040 41 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104780660 Common - ABC transporter, ATP-binding protein PSEEN1479 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 104780876 Common - glutathione S-transferase PSEEN1720 59 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 104781529 Common - sensor histidine kinase PSEEN2417 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 104783755 Common - lipoprotein, rare lipoprotein B family PSEEN4814 16 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 104779461 Common - hypothetical protein PSEEN0168 29 COG2606 EbsC, Uncharacterized conserved protein Function unknown 104780790 Common holB DNA polymerase III subunit delta' PSEEN1625 215 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 104781921 Common - hypothetical protein PSEEN2846 8 None None None 104782933 Common - hypothetical protein PSEEN3938 42 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 104780027 Common nusA transcription elongation factor NusA PSEEN0794 216 COG0195 NusA, Transcription elongation factor Transcription 104779734 Common - hypothetical protein PSEEN0461 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 104781424 Common - transcriptional regulator, LysR family PSEEN2306 168 COG0583 LysR, Transcriptional regulator Transcription 104782086 Common - hypothetical protein PSEEN3023 1 None None None 104782504 Common - low-affinity inorganic phosphate transporter PSEEN3466 159 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 104780194 Common - Dihydrodipicolinate synthase PSEEN0973 196 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 104781801 Common - hypothetical protein PSEEN2714 36 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 104783442 Common - hypothetical protein PSEEN4474 121 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 104783899 Common - hydrolase, MutT/nudix family PSEEN4973 72 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 104782239 Common - hypothetical protein PSEEN3184 1 None None None 104784446 Common trmE tRNA modification GTPase TrmE PSEEN5555 224 COG0486 ThdF, Predicted GTPase General function prediction only 104783063 Common - hypothetical protein PSEEN4083 178 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 104784316 Common lrp leucine-responsive regulatory protein PSEEN5417 164 COG1522 Lrp, Transcriptional regulators Transcription 104780540 Common - DNA-glycosylase PSEEN1351 80 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 104783699 Common - multidrug efflux outer membrane protein, RND family PSEEN4756 129 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 104783983 Common - hypothetical protein PSEEN5065 51 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 104784270 Common xerC site-specific tyrosine recombinase XerC PSEEN5368 221 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 104779421 Common pntB pyridine nucleotide transhydrogenase, beta subunit PSEEN0114 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 104784003 Common - amino acid ABC transporter, permease protein PSEEN5086 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 104780861 Common - 1-aminocyclopropane-1-carboxylate deaminase PSEEN1704 21 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 104783719 Common cioB ubiquinol oxidase subunit II, cyanide insensitive PSEEN4776 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 104780220 Common tgt queuine tRNA-ribosyltransferase PSEEN1000 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 104782008 Common - hypothetical protein PSEEN2941 1 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 104781393 Common - hypothetical protein PSEEN2273 94 COG2135 COG2135, Uncharacterized conserved protein Function unknown 104780599 Common - methionine aminopeptidase, type I Map PSEEN1415 248 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 104781321 Common topB DNA topoisomerase III PSEEN2193 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 104780004 Common - transcriptional regulator, GntR family PSEEN0769 153 COG2186 FadR, Transcriptional regulators Transcription 104780981 Common - hypothetical protein PSEEN1832 1 None None None 104781236 Pathogen - hypothetical protein PSEEN2101 1 None None None 104779894 Common ubiX aromatic acid decarboxylase PSEEN0637 152 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 104781355 Pathogen - hypothetical protein PSEEN2230 2 None None None 104781831 Common - hypothetical protein PSEEN2749 16 None None None 104784173 Common - sigma-54 dependent transcriptional regulator PSEEN5263 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 104780019 Common - hypothetical protein PSEEN0785 92 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 104784093 Common - substrate-binding region of ABC-type glycine transport system PSEEN5181 63 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 104781413 Common gor glutathione reductase PSEEN2295 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 104784128 Common - hypothetical protein PSEEN5218 1 None None None 104781212 Common - acetyltransferase, GNAT family PSEEN2077 8 COG0456 RimI, Acetyltransferases General function prediction only 104781203 Common - transcriptional regulator PSEEN2066 68 COG1396 HipB, Predicted transcriptional regulators Transcription 104782698 Pathogen - hypothetical protein PSEEN3685 1 None None None 104781197 Common - hypothetical protein PSEEN2060 49 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 104781506 Pathogen - hypothetical protein PSEEN2393 1 None None None 104780166 Common - multidrug transport protein; acriflavin resistance protein family PSEEN0944 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 104779338 Common def peptide deformylase PSEEN0025 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 104779553 Common - hypothetical protein PSEEN0271 18 COG1160 COG1160, Predicted GTPases General function prediction only 104782399 Common - hypothetical protein PSEEN3355 62 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 104780467 Common - hypothetical protein PSEEN1262 3 None None None 104782610 Common - hypothetical protein PSEEN3586 2 None None None 104784197 Common potI putrescine ABC transporter, permease protein PSEEN5291 182 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 104780995 Common - transcriptional regulator, GntR family PSEEN1848 135 COG2186 FadR, Transcriptional regulators Transcription 104783317 Common - hypothetical protein PSEEN4345 1 None None None 104780428 Common metG methionyl-tRNA synthetase PSEEN1220 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 104781348 Common - hypothetical protein PSEEN2223 44 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 104783969 Common - sensor histidine kinase/response regulator ChpA PSEEN5051 223 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 104781432 Pathogen - hypothetical protein PSEEN2316 1 None None None 104782098 Common - hypothetical protein PSEEN3035 96 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 104783525 Common - fusaric acid resistance protein PSEEN4559 50 COG1289 COG1289, Predicted membrane protein Function unknown 104783834 Common psiF protein induced by phosphate starvation PSEEN4899 22 None None None 104781457 Common - non-ribosomal peptide synthetase, terminal component PSEEN2342 210 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 104783273 Common - hypothetical protein PSEEN4300 106 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 104780851 Common - hypothetical protein PSEEN1693 7 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 104782617 Common - hypothetical protein PSEEN3594 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 104784069 Common fdhA formaldehyde dehydrogenase, glutathione-independent PSEEN5156 193 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 104783946 Common ligB NAD-dependent DNA ligase LigB PSEEN5027 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 104782169 Common - hypothetical protein PSEEN3109 4 None None None 104783878 Common - iron-sulfur cluster-binding protein PSEEN4949 134 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 104784363 Common - peptidase, M23/M37 family PSEEN5467 180 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 104783075 Common - hypothetical protein PSEEN4095 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 104779755 Common rplC 50S ribosomal protein L3 PSEEN0490 237 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 104782798 Common cheA chemotaxis histidine kinase CheA PSEEN3793 151 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 104782125 Common - polysaccharide deacetylase PSEEN3063 94 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 104780988 Common - methyl-accepting chemotaxis transducer PSEEN1841 152 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780938 Common - hypothetical protein PSEEN1787 8 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 104781229 Common ureA urease subunit gamma PSEEN2094 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 104782858 Common bkdA2 2-oxoisovalerate dehydrogenase, beta subunit PSEEN3854 166 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 104781583 Common - PLP-dependent transaminase PSEEN2473 194 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 104781409 Common - hypothetical protein PSEEN2290 1 None None None 104783621 Common pilA type IV pili prepilin PilA PSEEN4666 22 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 104783882 Common - ribosome-associated GTPase PSEEN4955 163 COG1162 COG1162, Predicted GTPases General function prediction only 104783677 Common pcnB poly(A) polymerase I (PAP) PSEEN4733 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 104779825 Common fdnH formate dehydrogenase-O, Fe-S subunit PSEEN0565 160 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 104782870 Common mgtE magnesium transporter PSEEN3870 174 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 104784439 Common atpE F0F1 ATP synthase subunit C PSEEN5547 65 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 104780802 Common - HlyD family secretion protein PSEEN1638 155 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 104781517 Common - hypothetical protein PSEEN2405 1 None None None 104780316 Common ttg2B toluene tolerance ABC efflux transporter, permease PSEEN1100 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 104781177 Common - methyl-accepting chemotaxis transducer PSEEN2039 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 104780218 Common - acetyltransferase, GNAT family PSEEN0998 10 COG0456 RimI, Acetyltransferases General function prediction only 104780384 Common - hypothetical protein PSEEN1175 17 None None None 104783032 Common - proline racemase PSEEN4050 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 104781572 Common - oxidoreductase, aldo/keto reductase family PSEEN2462 196 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 104782435 Common - hypothetical protein PSEEN3392 4 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 104782887 Common phhR phenylalanine hydroxylase gene cluster transcription activator PSEEN3891 168 COG3283 TyrR, Transcriptional regulator of aromatic amino acids metabolism Transcription / Amino acid transport and metabolism 104779485 Common - sensory box protein PSEEN0197 194 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 104782305 Common - transporter, NCS1 family PSEEN3254 66 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 104780488 Common livG leucine/isoleucine/valine transporter ATP-binding subunit PSEEN1283 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 104780393 Common - transcriptional regulator MetR PSEEN1184 176 COG0583 LysR, Transcriptional regulator Transcription 104781220 Common ppiB peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase) PSEEN2085 201 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 104783417 Common hupN DNA-binding protein HU form N PSEEN4448 142 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 104780830 Common hyi hydroxypyruvate isomerase PSEEN1671 86 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 104780012 Common dnaK chaperone Hsp70 in DNA biosynthesis/cell division PSEEN0778 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 104784392 Common - transcriptional regulator, LysR family PSEEN5497 193 COG0583 LysR, Transcriptional regulator Transcription 104781522 Common cioA-2 ubiquinol oxidase subunit I, cyanide insensitive PSEEN2410 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 104780075 Common - hypothetical protein PSEEN0847 41 COG4949 COG4949, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 104780875 Common - hypothetical protein PSEEN1719 1 None None None 104780476 Common - hypothetical protein PSEEN1271 51 None None None 104783285 Common ung uracil-DNA glycosylase PSEEN4312 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 104780856 Common - hypothetical protein PSEEN1699 3 None None None 104781908 Common - solvent/drug/ferric siderophore transport protein ExbB PSEEN2833 112 COG5306 COG5306, Uncharacterized conserved protein Function unknown 104781402 Common - DNA topoisomerase IB PSEEN2283 45 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 104784057 Common glnE glutamine synthetase adenylyltransferase PSEEN5144 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 104780254 Common - RNA polymerase sigma-70 factor, ECF family PSEEN1037 113 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 104781304 Common - acetyltransferase, GNAT family PSEEN2173 24 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 104784228 Common rbbA ribosome-associated ATPase, ATP-binding domain (N-terminal) PSEEN5323 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 104782821 Common fliF flagellar MS-ring protein PSEEN3816 125 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 104780562 Common - DNA replication initiation factor PSEEN1373 164 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 104781145 Common - peptidase, M24 family (methionine aminopeptidase) PSEEN2006 9 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 104781725 Common - hypothetical protein PSEEN2633 1 None None None 104781623 Pathogen - hypothetical protein PSEEN2517 1 None None None 104784137 Common - hypothetical protein PSEEN5227 10 None None None 104781111 Common pheT phenylalanyl-tRNA synthetase subunit beta PSEEN1968 248 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 104782099 Common - hypothetical protein PSEEN3036 30 COG5470 COG5470, Uncharacterized conserved protein Function unknown 104783419 Common - hypothetical protein PSEEN4450 68 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 104784037 Common - molybdate transport regulator ModE PSEEN5123 55 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 104783412 Common pepA leucyl aminopeptidase PSEEN4443 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 104782867 Common glyA-3 serine hydroxymethyltransferase PSEEN3863 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 104783164 Common rpoS RNA polymerase sigma factor RpoS PSEEN4189 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 104782979 Common - hypothetical protein PSEEN3992 75 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane