Chromohalobacter salexigens DSM 3043, complete genome NC_007963 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 92112180 Common - carboxyl-terminal protease Csal_0044 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 92112510 Common - Glutaredoxin-like protein NrdH Csal_0377 35 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 92113728 Common - aminotransferase, class IV Csal_1604 120 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 92113721 Common - protein of unknown function DUF177 Csal_1597 60 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 92114752 Common - protein-L-isoaspartate O-methyltransferase Csal_2634 155 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 92114084 Common - flagellar basal body-associated protein FliL Csal_1961 40 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 92114484 Common - glutathione-dependent formaldehyde-activating, GFA Csal_2364 60 COG3791 COG3791, Uncharacterized conserved protein Function unknown 92115182 Common - aspartate alpha-decarboxylase Csal_3067 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 92113699 Common - ApbE-like lipoprotein Csal_1575 142 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 92115132 Common - signal recognition particle protein Csal_3017 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 92114369 Common - Sel1-like protein Csal_2247 77 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 92114258 Nonpathogen - hypothetical protein Csal_2136 1 None None None 92114073 Common - Pseudouridine synthase, Rsu Csal_1950 195 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 92114345 Nonpathogen - protein of unknown function DUF1239 Csal_2223 4 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 92115126 Common - thiol:disulfide interchange protein DsbC Csal_3011 68 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 92114159 Common - Asparaginase Csal_2037 136 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 92114503 Common - transcriptional regulator, LysR family Csal_2385 191 COG0583 LysR, Transcriptional regulator Transcription 92115011 Common - pseudouridine synthase Csal_2894 206 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 92114099 Common flgD flagellar basal body rod modification protein Csal_1976 110 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 92112286 Common - transcriptional regulator, GntR family Csal_0151 124 COG2188 PhnF, Transcriptional regulators Transcription 92113935 Common - glycine cleavage system H protein Csal_1812 188 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 92114337 Common - BolA-like protein Csal_2215 92 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 92112531 Common - hypothetical protein Csal_0398 15 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 92113005 Common - hypothetical protein Csal_0877 37 COG3571 COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 92113034 Common - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Csal_0906 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92112432 Common - 3-carboxy-cis,cis-muconate cycloisomerase Csal_0298 179 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 92112165 Nonpathogen - hypothetical protein Csal_0029 1 None None None 92113780 Nonpathogen - Flp/Fap pilin component Csal_1656 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 92114229 Common - hypothetical protein Csal_2107 25 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 92114063 Common - NUDIX hydrolase Csal_1940 112 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 92114799 Common - secretion protein HlyD Csal_2681 160 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 92113332 Common - hypothetical protein Csal_1206 2 None None None 92114429 Common - Urease accessory protein UreD Csal_2308 80 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 92114913 Common - methylated-DNA--protein-cysteine methyltransferase Csal_2796 219 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 92112564 Common - ribosomal protein L14 Csal_0431 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 92114327 Common - glutathione S-transferase-like protein Csal_2205 100 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92112790 Common - hypothetical protein Csal_0658 4 None None None 92112460 Common - alpha/beta hydrolase Csal_0327 120 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114150 Common - putative flagellar transcriptional activator transcription regulator protein Csal_2028 27 None None None 92115116 Common - binding-protein-dependent transport systems inner membrane component Csal_3001 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 92112257 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_0122 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 92112614 Common ileS isoleucyl-tRNA synthetase Csal_0481 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92115200 Common - carbamoyl-phosphate synthase, large subunit Csal_3085 235 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 92112561 Common rplP 50S ribosomal protein L16 Csal_0428 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 92112949 Common - hypothetical protein Csal_0821 42 COG3530 COG3530, Uncharacterized protein conserved in bacteria Function unknown 92115178 Common - poly(A) polymerase Csal_3063 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 92114874 Common - FAD dependent oxidoreductase Csal_2756 56 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 92115149 Common - hypothetical protein Csal_3034 17 None None None 92113578 Common - putative tricarboxylic transport membrane protein Csal_1454 5 None None None 92115106 Common - conserved hypothetical protein 95 Csal_2990 211 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 92114790 Common - protein of unknown function DUF81 Csal_2672 78 COG0730 COG0730, Predicted permeases General function prediction only 92113652 Common - Shikimate/quinate 5-dehydrogenase Csal_1528 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 92114320 Common - methyltransferase Csal_2198 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 92113521 Common - phage head completion Csal_1395 20 None None None 92114575 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2457 65 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92112945 Common - DEAD/DEAH box helicase-like protein Csal_0817 230 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 92114130 Common - Mammalian cell entry related Csal_2008 65 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 92112334 Common - Aspartate racemase Csal_0199 85 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 92113420 Common - major facilitator superfamily MFS_1 Csal_1294 178 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113966 Common - hypothetical protein Csal_1843 70 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 92113943 Common - acetyl-CoA synthetase Csal_1820 205 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 92112273 Common - Cupin 2 protein Csal_0138 17 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 92112429 Common - Auxin Efflux Carrier Csal_0295 89 COG0679 COG0679, Predicted permeases General function prediction only 92114870 Common - glycosyl transferase, family 2 Csal_2752 120 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92114440 Common - Indole-3-glycerol-phosphate synthase Csal_2319 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 92113921 Common - OmpA/MotB Csal_1798 173 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 92114639 Common - Peptidase M1, alanyl aminopeptidase Csal_2521 159 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 92112575 Common - ribosomal protein L36 Csal_0442 136 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 92113971 Common ruvB Holliday junction DNA helicase B Csal_1848 213 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 92113464 Common - Glutamate racemase Csal_1338 172 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 92113528 Nonpathogen - hypothetical protein Csal_1402 4 None None None 92114996 Common - ThiJ/PfpI Csal_2879 53 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92112230 Nonpathogen - hypothetical protein Csal_0095 1 None None None 92114319 Common - Cell division protein, FtsL -like protein Csal_2197 20 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 92112459 Common - hypothetical protein Csal_0326 8 None None None 92113143 Common - 2-nitropropane dioxygenase, NPD Csal_1015 119 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 92112256 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_0121 172 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 92113677 Common - Alcohol dehydrogenase GroES-like protein Csal_1553 181 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92113997 Common - Carbonate dehydratase Csal_1874 150 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 92112543 Common - ribosomal protein L11 Csal_0410 248 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 92112578 Common - ribosomal protein S4 Csal_0445 219 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 92113488 Nonpathogen - hypothetical protein Csal_1362 1 None None None 92115207 Common - protein of unknown function DUF6, transmembrane Csal_3092 30 COG2962 RarD, Predicted permeases General function prediction only 92113397 Common - 4Fe-4S cluster binding Csal_1271 141 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 92114424 Common - Urease accessory protein UreF Csal_2303 68 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 92112538 Common - FAD linked oxidase-like protein Csal_0405 198 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 92113990 Common - alpha/beta hydrolase Csal_1867 65 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 92113601 Common - Phosphate ABC transporter, permease protein PstC Csal_1477 227 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 92114168 Common - ATP-dependent Clp protease, proteolytic subunit ClpP Csal_2046 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 92114598 Common - ABC transporter related Csal_2480 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 92113179 Common - ABC transporter related Csal_1051 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 92115353 Common - secretion protein HlyD Csal_3238 135 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 92113978 Common - Tetratricopeptide TPR_2 Csal_1855 98 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 92114474 Common - glycine betaine/L-proline transport ATP binding subunit Csal_2354 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 92113909 Common - guanine deaminase Csal_1786 137 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 92114248 Common - hypothetical protein Csal_2126 14 COG5453 COG5453, Uncharacterized conserved protein Function unknown 92114204 Common - ABC transporter related Csal_2082 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 92115285 Common - transcriptional regulator, AraC family Csal_3170 48 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92114317 Common - UDP-N-acetylmuramyl-tripeptide synthetases Csal_2195 214 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 92114820 Common - ABC transporter related Csal_2702 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 92115064 Nonpathogen - hypothetical protein Csal_2948 1 None None None 92113769 Common - hypothetical protein Csal_1645 7 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 92115227 Common - diaminopimelate decarboxylase Csal_3112 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 92113052 Common - Polynucleotide adenylyltransferase region Csal_0924 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 92115402 Common - ATP synthase F1, delta subunit Csal_3287 183 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 92115058 Common - hypothetical protein Csal_2942 10 None None None 92112639 Common - flagellar hook-associated 2-like protein Csal_0506 100 COG1345 FliD, Flagellar capping protein Cell motility and secretion 92112368 Common - hypothetical protein Csal_0233 29 None None None 92114712 Common dsbG disulfide isomerase/thiol-disulfide oxidase Csal_2594 26 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 92112382 Common - Phosphonate-binding periplasmic protein Csal_0247 75 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 92113475 Common - GTP-binding Csal_1349 98 COG1161 COG1161, Predicted GTPases General function prediction only 92114035 Common - 4Fe-4S ferredoxin, iron-sulfur binding Csal_1912 69 COG1149 COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain Energy production and conversion 92113814 Common - glycosyl transferase, family 2 Csal_1691 116 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92113111 Common - transcriptional regulator, Crp/Fnr family Csal_0983 98 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 92113731 Common - DNA polymerase III, delta prime subunit Csal_1607 224 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 92112246 Common - nucleoside transporter Csal_0111 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 92115372 Common - ferric iron reductase Csal_3257 20 COG4114 FhuF, Uncharacterized Fe-S protein General function prediction only 92112927 Common - Aldose 1-epimerase Csal_0799 96 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 92112760 Common - carbon storage regulator, CsrA Csal_0627 81 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 92113392 Common - Colicin V production protein Csal_1266 2 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 92115249 Common - UspA Csal_3134 73 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 92112994 Common - two component transcriptional regulator, LuxR family Csal_0866 196 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92113023 Nonpathogen - hypothetical protein Csal_0895 1 None None None 92112891 Common - hypothetical protein Csal_0763 23 None None None 92112197 Common - transcriptional regulator, LuxR family Csal_0062 56 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92112860 Common - periplasmic sensor signal transduction histidine kinase Csal_0728 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92112765 Common - transcriptional regulator, DeoR family Csal_0632 61 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 92115140 Common - cell division topological specificity factor MinE Csal_3025 83 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 92113474 Common - aminotransferase AlaT Csal_1348 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 92114054 Nonpathogen - hypothetical protein Csal_1931 3 None None None 92113888 Common - D-galactarate dehydratase/Altronate hydrolase-like protein Csal_1765 43 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 92114447 Common - Glycerone kinase Csal_2326 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 92113285 Common - OsmC-like protein Csal_1158 78 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 92112515 Common - aldo/keto reductase Csal_0382 203 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 92112830 Common - Cell division protein ZipA Csal_0698 37 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 92114092 Common - Flagellar hook-associated protein Csal_1969 116 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 92114930 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase Csal_2813 209 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 92114673 Common - protein of unknown function DUF1249 Csal_2555 25 COG3151 COG3151, Uncharacterized protein conserved in bacteria Function unknown 92113264 Common - glutathione S-transferase-like protein Csal_1137 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92113098 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Csal_0970 147 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 92114860 Common - DNA-binding transcriptional regulator HexR Csal_2742 95 COG1737 RpiR, Transcriptional regulators Transcription 92113760 Common cysM cysteine synthase B Csal_1636 224 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 92115319 Common pyrE orotate phosphoribosyltransferase Csal_3204 116 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 92115296 Common - Hydroxypyruvate isomerase Csal_3181 81 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 92113114 Common - Carboxylesterase Csal_0986 103 COG0627 COG0627, Predicted esterase General function prediction only 92115406 Common - ATP synthase I chain Csal_3291 15 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 92114102 Common - Flageller protein FlgA Csal_1979 61 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 92112494 Common - ABC transporter related Csal_0361 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 92115024 Nonpathogen - hypothetical protein Csal_2908 1 None None None 92115397 Common - UDP-N-acetylglucosamine pyrophosphorylase Csal_3282 233 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 92114407 Common - ribosomal protein L11 methyltransferase Csal_2286 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 92114974 Common - Pyrrolo-quinoline quinone Csal_2857 126 COG1520 COG1520, FOG: WD40-like repeat Function unknown 92112759 Common - aspartate kinase Csal_0626 233 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 92114187 Common - hypoxanthine-guanine phosphoribosyltransferase Csal_2065 152 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 92112789 Common - YbhB and YbcL Csal_0657 123 COG1881 COG1881, Phospholipid-binding protein General function prediction only 92115168 Common - twitching motility protein Csal_3053 215 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 92114782 Common - dihydroxy-acid dehydratase Csal_2664 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 92115358 Common - NAD-dependent epimerase/dehydratase Csal_3243 111 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92112952 Common - transcriptional regulator, LysR family Csal_0824 165 COG0583 LysR, Transcriptional regulator Transcription 92113619 Common - hypothetical protein Csal_1495 27 COG3662 COG3662, Uncharacterized protein conserved in bacteria Function unknown 92112190 Common - putative hemagglutinin/hemolysin-related protein Csal_0055 178 None None None 92114222 Common - ABC transporter related Csal_2100 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 92115181 Common - pantoate--beta-alanine ligase Csal_3066 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 92114467 Common - protein of unknown function DUF488 Csal_2347 76 COG3189 COG3189, Uncharacterized conserved protein Function unknown 92113315 Common - transcriptional regulator, LysR family Csal_1188 111 COG0583 LysR, Transcriptional regulator Transcription 92113507 Common - hypothetical protein Csal_1381 2 None None None 92112844 Common - phosphate transporter Csal_0712 173 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 92113772 Common - hypothetical protein Csal_1648 17 None None None 92112697 Common - translation elongation factor Ts Csal_0564 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 92114109 Common - sulfotransferase Csal_1986 78 COG3914 Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family Posttranslational modification, protein turnover, chaperones 92113089 Common - Glucose/sorbosone dehydrogenases-like protein Csal_0961 73 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 92115223 Common - Uroporphyrinogen III synthase HEM4 Csal_3108 53 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 92114023 Common - pyridoxamine 5'-phosphate oxidase Csal_1900 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 92113139 Common - beta-lactamase-like protein Csal_1011 13 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 92113685 Nonpathogen - hypothetical protein Csal_1561 1 None None None 92112487 Common - transaldolase B Csal_0354 172 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 92114240 Common - thiamine biosynthesis protein ThiI Csal_2118 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 92115302 Common - L-carnitine dehydratase/bile acid-inducible protein F Csal_3187 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 92112155 Common - ribose-5-phosphate isomerase A Csal_0019 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 92115280 Common - transcriptional regulator, LysR family Csal_3165 138 COG0583 LysR, Transcriptional regulator Transcription 92115377 Common - protein of unknown function DUF540 Csal_3262 34 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 92115214 Common - protein of unknown function UPF0125 Csal_3099 58 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 92113059 Common - PfkB Csal_0931 152 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 92115326 Common - NAD-dependent epimerase/dehydratase Csal_3211 230 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92112839 Common - PHP-like protein Csal_0707 115 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 92115216 Common smpB SsrA-binding protein Csal_3101 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 92112418 Common - transcriptional regulator, MarR family Csal_0284 103 COG1846 MarR, Transcriptional regulators Transcription 92114630 Common - MgtC/SapB transporter Csal_2512 119 COG1285 SapB, Uncharacterized membrane protein Function unknown 92115368 Common - two component transcriptional regulator, winged helix family Csal_3253 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92112622 Common - methylation Csal_0489 10 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 92112478 Common - transcriptional regulator, GntR family Csal_0345 94 COG1802 GntR, Transcriptional regulators Transcription 92112700 Common - undecaprenyl diphosphate synthase Csal_0567 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 92114233 Common - protein of unknown function UPF0118 Csal_2111 194 COG0628 PerM, Predicted permease General function prediction only 92112347 Common - extracellular solute-binding protein, family 5 Csal_0212 208 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 92112875 Common - transcriptional regulator, AraC family Csal_0746 75 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92115051 Common - Coenzyme A biosynthesis protein Csal_2935 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 92113870 Common - TRAP dicarboxylate transporter, DctP subunit Csal_1747 117 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92113527 Common - DNA adenine methylase Csal_1401 105 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 92113379 Common - CBS domain containing membrane protein Csal_1253 110 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 92114522 Common - secretion protein HlyD Csal_2404 97 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 92113808 Common - polysaccharide biosynthesis protein Csal_1685 31 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 92114838 Common - hypothetical protein Csal_2720 26 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92112747 Common - 3-dehydroquinate synthase Csal_0614 207 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 92114296 Common - type II secretion system protein E Csal_2174 210 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 92112426 Common - 4-hydroxyphenylpyruvate dioxygenase Csal_0292 79 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 92112972 Common - type III restriction enzyme, res subunit Csal_0844 114 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 92114823 Common - proline racemase Csal_2705 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 92113741 Common - MotA/TolQ/ExbB proton channel Csal_1617 13 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 92114376 Common - hypothetical protein Csal_2255 23 COG4104 COG4104, Uncharacterized conserved protein Function unknown 92115097 Common - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Csal_2981 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 92113630 Common - glycerophosphoryl diester phosphodiesterase Csal_1506 114 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 92114661 Common - DNA topoisomerase IV subunit A Csal_2543 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 92113304 Common - hypothetical protein Csal_1177 24 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 92115309 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase Csal_3194 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 92114779 Common nudE ADP-ribose diphosphatase NudE Csal_2661 134 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 92112215 Common - Ureidoglycolate hydrolase Csal_0080 36 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 92115113 Common - lysyl-tRNA synthetase Csal_2997 244 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 92113626 Common - TonB-dependent receptor Csal_1502 127 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 92114392 Common - protein of unknown function DUF879 Csal_2271 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 92115332 Common - type III effector Hrp-dependent outers Csal_3217 49 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 92112815 Common - membrane-bound metal-dependent hydrolase Csal_0683 27 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 92112720 Common - short chain dehydrogenase Csal_0587 206 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114080 Common - flagellar assembly protein FliH Csal_1957 44 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 92113546 Common - ABC transporter related Csal_1421 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 92113087 Common - thiamine biosynthesis protein ThiC Csal_0959 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 92113828 Nonpathogen - hypothetical protein Csal_1705 1 None None None 92112869 Common - hypothetical protein Csal_0740 12 COG1623 COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) General function prediction only 92112858 Common - Uncharacterized protein UPF0065 Csal_0726 71 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92114505 Common - protein of unknown function DUF1028 Csal_2387 40 COG3342 COG3342, Uncharacterized conserved protein Function unknown 92114583 Nonpathogen - hypothetical protein Csal_2465 6 None None None 92114004 Common - Alpha-L-glutamate ligase-related protein Csal_1881 19 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 92113557 Common - ABC transporter related Csal_1432 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 92113388 Common - tryptophan synthase, alpha subunit Csal_1262 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 92114593 Common - amidohydrolase 2 Csal_2475 39 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 92112608 Common rpmA 50S ribosomal protein L27 Csal_0475 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 92114540 Common - transcriptional regulator, GntR family Csal_2422 142 COG1802 GntR, Transcriptional regulators Transcription 92113798 Common - DNA polymerase, beta-like region Csal_1674 23 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 92113823 Common - glycosyl transferase, family 2 Csal_1700 178 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92113275 Common - Flavoprotein WrbA Csal_1148 115 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 92112922 Common - HAD-superfamily hydrolase, subfamily IIA Csal_0794 104 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 92113726 Common - acyl carrier protein Csal_1602 181 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92113766 Common - transcriptional regulator, XRE family Csal_1642 106 COG1396 HipB, Predicted transcriptional regulators Transcription 92114532 Common - binding-protein-dependent transport systems inner membrane component Csal_2414 158 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 92114800 Common - Fusaric acid resistance protein conserved region Csal_2682 47 COG1289 COG1289, Predicted membrane protein Function unknown 92112336 Common - Propeptide, PepSY amd peptidase M4 Csal_0201 75 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 92113675 Common - lipoate-protein ligase B Csal_1551 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 92112806 Common - transcriptional regulator, RpiR family Csal_0674 79 COG1737 RpiR, Transcriptional regulators Transcription 92113661 Common - Lysine exporter protein (LYSE/YGGA) Csal_1537 104 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92114362 Common - cell shape determining protein, MreB/Mrl family Csal_2240 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 92112175 Common - protein of unknown function DUF6, transmembrane Csal_0039 71 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 92114934 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Csal_2817 207 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 92114807 Common glcF glycolate oxidase iron-sulfur subunit Csal_2689 180 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 92112440 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0306 110 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92113163 Nonpathogen - hypothetical protein Csal_1035 11 COG1084 COG1084, Predicted GTPase General function prediction only 92112144 Common - ADP-L-glycero-D-manno-heptose-6-epimerase Csal_0008 228 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92113224 Common - hypothetical protein Csal_1097 15 COG5343 COG5343, Uncharacterized protein conserved in bacteria Function unknown 92112655 Common - A/G-specific adenine glycosylase Csal_0522 234 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 92112401 Common - translation initiation factor SUI1 Csal_0267 67 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 92114402 Common - Inorganic diphosphatase Csal_2281 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 92113195 Nonpathogen - hypothetical protein Csal_1067 1 None None None 92114195 Common purU formyltetrahydrofolate deformylase Csal_2073 207 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 92113079 Common - heat shock protein DnaJ-like protein Csal_0951 18 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 92114638 Common - hypothetical protein Csal_2520 3 None None None 92114843 Common - aldehyde dehydrogenase Csal_2725 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113217 Common - transcriptional regulator, GntR family Csal_1090 209 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 92114880 Common - Endoribonuclease L-PSP Csal_2762 107 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 92112902 Common - ATP-binding protein Csal_0774 83 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 92115416 Common - conserved hypothetical protein 701 Csal_3301 95 COG1981 COG1981, Predicted membrane protein Function unknown 92114381 Common - OmpA/MotB Csal_2260 113 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 92112355 Common - periplasmic solute binding protein Csal_0220 167 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 92113482 Common - phage integrase Csal_1356 56 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 92114308 Common - cell division protein FtsA Csal_2186 198 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 92113862 Common - GntR-like protein Csal_1739 138 COG2186 FadR, Transcriptional regulators Transcription 92113409 Common - putative symporter YidK Csal_1283 121 COG4146 COG4146, Predicted symporter General function prediction only 92112646 Common - glutamine amidotransferase class-I Csal_0513 87 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 92114557 Common - translation initiation factor IF-1 Csal_2439 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 92112556 Common - Ribosomal protein L25/L23 Csal_0423 204 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 92113170 Common - transport system permease protein Csal_1042 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92114831 Common - haloacid dehalogenase, type II Csal_2713 78 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 92113247 Common - uroporphyrin-III C-methyltransferase Csal_1120 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 92113368 Common - hypothetical protein Csal_1242 10 None None None 92114695 Common - NUDIX hydrolase Csal_2577 112 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 92114954 Common - putative PAS/PAC sensor protein Csal_2837 176 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 92113025 Common - Ferrochelatase Csal_0897 170 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 92114169 Common - trigger factor Csal_2047 216 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 92115339 Common - ABC transporter related Csal_3224 249 COG4136 COG4136, ABC-type uncharacterized transport system, ATPase component General function prediction only 92114460 Common - proline racemase Csal_2339 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 92112669 Common - aminotransferase, class I and II Csal_0536 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 92112307 Nonpathogen - hypothetical protein Csal_0172 1 None None None 92113705 Common - Porphyromonas-type peptidyl-arginine deiminase Csal_1581 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 92114780 Nonpathogen - hypothetical protein Csal_2662 1 None None None 92112743 Common - Pilus assembly protein, PilO Csal_0610 47 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 92113203 Common - (S)-2-hydroxy-acid oxidase Csal_1075 110 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 92113226 Common - methyl-accepting chemotaxis sensory transducer Csal_1099 153 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92113232 Nonpathogen - hypothetical protein Csal_1105 10 None None None 92112384 Common - Phosphonate uptake transporter Csal_0249 105 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 92115277 Common - Rh-like protein/ammonium transporter Csal_3162 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 92114971 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Csal_2854 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 92114642 Common - nucleotide-binding protein Csal_2524 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 92113776 Common - transcriptional regulator MvaT, P16 subunit Csal_1652 4 None None None 92114273 Common - protein of unknown function DUF339 Csal_2151 41 COG2938 COG2938, Uncharacterized conserved protein Function unknown 92113958 Common cls cardiolipin synthetase Csal_1835 151 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 92113832 Common - hypothetical protein Csal_1709 22 None None None 92112826 Common - Oxaloacetate decarboxylase Csal_0694 56 COG1883 OadB, Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Energy production and conversion 92115083 Common - hypothetical protein Csal_2967 8 None None None 92112682 Common - extracellular solute-binding protein, family 1 Csal_0549 105 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 92113438 Common - ThiJ/PfpI Csal_1312 109 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 92112218 Common - Chromate transporter Csal_0083 105 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 92113445 Nonpathogen - hypothetical protein Csal_1319 1 None None None 92113514 Common - Phage-related baseplate assembly protein V Csal_1388 33 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 92113968 Common - hypothetical protein Csal_1845 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 92113092 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Csal_0964 32 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 92112689 Common - hypothetical protein Csal_0556 6 None None None 92112170 Common - protein of unknown function DUF181 Csal_0034 52 COG1944 COG1944, Uncharacterized conserved protein Function unknown 92115340 Common - binding-protein-dependent transport systems inner membrane component Csal_3225 52 COG4135 COG4135, ABC-type uncharacterized transport system, permease component General function prediction only 92113754 Common - Peptidase S26A, signal peptidase I Csal_1630 211 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 92112969 Common - phosphoribosylformylglycinamidine synthase Csal_0841 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 92115310 Common - mandelate racemase/muconate lactonizing enzyme Csal_3195 125 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92113589 Nonpathogen - hypothetical protein Csal_1465 1 None None None 92114059 Common - hypothetical protein Csal_1936 69 COG1738 COG1738, Uncharacterized conserved protein Function unknown 92112937 Common - ABC transporter related Csal_0809 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 92113157 Common - hypothetical protein Csal_1029 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 92114291 Common rdgC recombination associated protein Csal_2169 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 92114482 Common - lysine N6-hydroxylase/L-ornithine N5-oxygenase family protein Csal_2362 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 92112322 Common - hypothetical protein Csal_0187 19 COG3443 COG3443, Predicted periplasmic or secreted protein General function prediction only 92113656 Common - UBA/THIF-type NAD/FAD binding fold Csal_1532 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 92112718 Common - Carboxylyase-related protein Csal_0585 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 92113206 Common - hypothetical protein Csal_1078 43 COG1694 MazG, Predicted pyrophosphatase General function prediction only 92113989 Common - peptide methionine sulfoxide reductase Csal_1866 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 92112147 Common - glycosyl transferase, family 2 Csal_0011 90 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92114989 Common trkA potassium transporter peripheral membrane component Csal_2872 146 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 92113429 Common - ferredoxin-dependent glutamate synthase Csal_1303 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 92114388 Common - hypothetical protein Csal_2267 2 None None None 92113299 Common - GTP cyclohydrolase II Csal_1172 177 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 92113132 Common - Rieske (2Fe-2S) protein Csal_1004 84 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 92113374 Common - Sodium/proline symporter Csal_1248 117 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92115205 Common - transport system permease protein Csal_3090 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92113561 Nonpathogen - hypothetical protein Csal_1437 1 None None None 92114416 Common - predicted kinase Csal_2295 64 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 92112654 Common - AsmA Csal_0521 50 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 92112960 Common - transcriptional regulator, DeoR family Csal_0832 113 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 92114615 Common - heat shock protein 90 Csal_2497 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 92112582 Common - major facilitator superfamily MFS_1 Csal_0449 149 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92114476 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2356 90 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 92115002 Common - 2OG-Fe(II) oxygenase Csal_2885 52 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 92114010 Common - hypothetical protein Csal_1887 30 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 92114549 Common - acyl-CoA dehydrogenase-like protein Csal_2431 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 92113852 Common - short-chain dehydrogenase/reductase SDR Csal_1729 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113880 Common - transcriptional regulator, LysR family Csal_1757 137 COG0583 LysR, Transcriptional regulator Transcription 92112448 Nonpathogen - hypothetical protein Csal_0314 1 None None None 92112934 Nonpathogen - hypothetical protein Csal_0806 1 None None None 92113044 Common - aminoglycoside phosphotransferase Csal_0916 91 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 92114681 Common - putative transcriptional regulator Csal_2563 126 COG1733 COG1733, Predicted transcriptional regulators Transcription 92112982 Common - N-acetyl-anhydromuranmyl-L-alanine amidase Csal_0854 105 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 92112264 Common - transcriptional regulator, GntR family Csal_0129 22 COG2188 PhnF, Transcriptional regulators Transcription 92113913 Common - transcriptional regulator, TetR family Csal_1790 72 COG1309 AcrR, Transcriptional regulator Transcription 92115420 Common - hypothetical protein Csal_3305 56 COG2187 COG2187, Uncharacterized protein conserved in bacteria Function unknown 92115268 Common - Phenylacetic acid degradation-related protein Csal_3153 37 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 92112450 Common - hypothetical protein Csal_0316 21 COG4104 COG4104, Uncharacterized conserved protein Function unknown 92114966 Common - HesB/YadR/YfhF Csal_2849 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 92114747 Common - alanine racemase Csal_2629 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 92114606 Common - Antibiotic biosynthesis monooxygenase Csal_2488 18 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 92114765 Common - PfkB Csal_2647 96 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 92112637 Common - ketol-acid reductoisomerase Csal_0504 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 92114573 Common - Rieske (2Fe-2S) protein Csal_2455 83 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 92114689 Common - Dihydrofolate reductase Csal_2571 149 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 92113413 Nonpathogen - Transglycosylase-associated protein Csal_1287 1 COG2261 COG2261, Predicted membrane protein Function unknown 92112391 Nonpathogen - hypothetical protein Csal_0256 1 None None None 92114115 Common - flagellar protein FlaG protein Csal_1993 19 COG1334 FlaG, Uncharacterized flagellar protein FlaG Cell motility and secretion 92115075 Common - thioredoxin reductase Csal_2959 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 92114139 Common - chemotaxis regulator CheZ Csal_2017 43 COG3143 CheZ, Chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92114288 Common - chorismate mutase Csal_2166 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 92112398 Common - hypothetical protein Csal_0264 8 None None None 92113109 Common - transcriptional regulator, LysR family Csal_0981 171 COG0583 LysR, Transcriptional regulator Transcription 92115388 Nonpathogen - hypothetical protein Csal_3273 1 None None None 92114787 Common - MOSC Csal_2669 58 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 92112714 Common - Ppx/GppA phosphatase Csal_0581 176 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 92113646 Common - peptidyl-tRNA hydrolase Csal_1522 215 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 92113980 Common - phosphoglycolate phosphatase Csal_1857 160 COG0546 Gph, Predicted phosphatases General function prediction only 92113637 Common - secretion protein HlyD Csal_1513 163 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 92112508 Common - fructose-bisphosphate aldolase Csal_0375 63 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 92114266 Nonpathogen - SEC-C motif Csal_2144 3 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 92114891 Common - glycosyl transferase, group 1 Csal_2773 221 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92112664 Common - protein of unknown function DUF182 Csal_0531 113 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 92112670 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_0537 83 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92114218 Common - uracil-DNA glycosylase Csal_2096 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 92112791 Common - transcriptional regulator, LysR family Csal_0659 184 COG0583 LysR, Transcriptional regulator Transcription 92115154 Common - hypothetical protein Csal_3039 110 COG2606 EbsC, Uncharacterized conserved protein Function unknown 92114125 Common - carbon starvation protein CstA Csal_2003 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 92113895 Common - glycosyl transferase, group 1 Csal_1772 138 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92114140 Common - response regulator receiver domain protein (CheY-like) Csal_2018 216 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92114709 Common - hypothetical protein Csal_2591 8 None None None 92112526 Common - Auxin Efflux Carrier Csal_0393 26 COG0679 COG0679, Predicted permeases General function prediction only 92112279 Common - hypothetical protein Csal_0144 15 None None None 92112912 Common - transcriptional regulator, LysR family Csal_0784 140 COG0583 LysR, Transcriptional regulator Transcription 92112931 Common - Catalase Csal_0803 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 92113323 Common - ABC transporter related Csal_1196 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 92112710 Common - Ribonuclease H Csal_0577 208 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 92112275 Common - short chain dehydrogenase Csal_0140 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113854 Common - TRAP dicarboxylate transporter- DctM subunit Csal_1731 134 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92114577 Common - ferredoxin Csal_2459 100 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 92114226 Common - glycerol kinase Csal_2104 178 COG0554 GlpK, Glycerol kinase Energy production and conversion 92113882 Nonpathogen - hypothetical protein Csal_1759 1 None None None 92115351 Common - YjgF-like protein Csal_3236 187 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 92114569 Common - 3-isopropylmalate dehydrogenase Csal_2451 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 92113427 Common - hypothetical protein Csal_1301 3 None None None 92114302 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Csal_2180 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 92112387 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein Csal_0252 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 92112577 Common - 30S ribosomal protein S11 Csal_0444 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 92114493 Common - Abortive infection protein Csal_2373 9 None None None 92112332 Common - transcriptional regulator, XRE family with cupin sensor protein Csal_0197 91 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 92113654 Common - modification methylase, HemK family Csal_1530 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 92113973 Common - MotA/TolQ/ExbB proton channel Csal_1850 146 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 92113537 Common - cytochrome B561 Csal_1412 65 COG3038 CybB, Cytochrome B561 Energy production and conversion 92114994 Common - nitroreductase Csal_2877 20 COG0778 NfnB, Nitroreductase Energy production and conversion 92112775 Common frcK putative fructose transport system kinase Csal_0642 46 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 92113141 Common - secretion protein HlyD Csal_1013 148 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 92115120 Common - transcriptional regulator, MerR family Csal_3005 140 COG0789 SoxR, Predicted transcriptional regulators Transcription 92114033 Common - hypothetical protein Csal_1910 5 None None None 92113587 Common - hypothetical protein Csal_1463 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 92112943 Common - Alcohol dehydrogenase, zinc-binding Csal_0815 189 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92114898 Common - succinylglutamate desuccinylase Csal_2780 24 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 92114813 Common - Sulfite reductase (NADPH) hemoprotein, beta subunit Csal_2695 150 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 92114740 Common - SelT/selW/selH selenoprotein Csal_2622 29 COG3526 COG3526, Uncharacterized protein conserved in bacteria Posttranslational modification, protein turnover, chaperones 92113390 Common - FolC bifunctional protein Csal_1264 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 92114432 Common - inner-membrane translocator Csal_2311 162 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 92112624 Common - Tfp pilus assembly protein PilW-like protein Csal_0491 18 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 92113550 Nonpathogen - hypothetical protein Csal_1425 1 None None None 92115062 Common - binding-protein-dependent transport systems inner membrane component Csal_2946 145 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 92115379 Common - phosphate uptake regulator, PhoU Csal_3264 200 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 92114481 Common - transcriptional regulator, LysR family Csal_2361 186 COG0583 LysR, Transcriptional regulator Transcription 92113466 Common - NAD-glutamate dehydrogenase Csal_1340 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 92113486 Nonpathogen - hypothetical protein Csal_1360 1 None None None 92114031 Common - Excisionase/Xis, DNA-binding Csal_1908 48 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 92115047 Common - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Csal_2931 96 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 92112753 Common - 4Fe-4S ferredoxin, iron-sulfur binding Csal_0620 142 COG1146 COG1146, Ferredoxin Energy production and conversion 92114374 Common - hypothetical protein Csal_2253 3 None None None 92113576 Common - transcriptional regulator, IclR family Csal_1452 66 COG1414 IclR, Transcriptional regulator Transcription 92113603 Common - Phosphate transport system permease protein 1 Csal_1479 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 92113155 Common - transcriptional regulator, LysR family Csal_1027 186 COG0583 LysR, Transcriptional regulator Transcription 92114501 Common - transcriptional regulator, LysR family Csal_2383 189 COG0583 LysR, Transcriptional regulator Transcription 92112563 Common - ribosomal protein S17 Csal_0430 230 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 92114343 Common - KpsF/GutQ family protein Csal_2221 149 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 92115335 Common - hypothetical protein Csal_3220 51 COG3222 COG3222, Uncharacterized protein conserved in bacteria Function unknown 92113481 Nonpathogen - hypothetical protein Csal_1355 1 None None None 92114110 Common - hypothetical protein Csal_1988 41 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 92114730 Common - binding-protein-dependent transport systems inner membrane component Csal_2612 187 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 92112232 Common - exodeoxyribonuclease VII, small subunit Csal_0097 6 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 92112329 Common - hypothetical protein Csal_0194 5 None None None 92112587 Common - dTDP-4-dehydrorhamnose reductase Csal_0454 21 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 92114075 Common - rarD protein Csal_1952 95 COG2962 RarD, Predicted permeases General function prediction only 92113782 Common - type II and III secretion system protein Csal_1658 139 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 92114515 Common - UspA Csal_2397 146 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 92114359 Common - maf protein Csal_2237 197 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 92115134 Common - protein of unknown function DUF21 Csal_3019 219 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 92112195 Common - amino acid permease-associated region Csal_0060 188 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 92113902 Common - isochorismatase hydrolase Csal_1779 84 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 92113596 Common - serine phosphatase Csal_1472 64 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 92112592 Common - hypothetical protein Csal_0459 14 None None None 92114227 Common - transcriptional regulator, DeoR family Csal_2105 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 92112299 Common - Uncharacterized protein UPF0065 Csal_0164 31 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92112536 Common - GntR-like protein Csal_0403 150 COG2186 FadR, Transcriptional regulators Transcription 92113255 Common - beta-lactamase Csal_1128 64 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 92112292 Common - transcriptional regulator, GntR family Csal_0157 182 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 92114915 Common - hypothetical protein Csal_2798 6 None None None 92114012 Common metH B12-dependent methionine synthase Csal_1889 179 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 92113540 Common - Na+/H+ antiporter NhaC Csal_1415 55 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 92112492 Common - Alcohol dehydrogenase GroES-like protein Csal_0359 210 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92112163 Common - sigma-54 factor, interaction region Csal_0027 163 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 92112919 Nonpathogen - hypothetical protein Csal_0791 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 92114656 Common - putative esterase Csal_2538 47 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 92112979 Common - Pseudouridine synthase, Rsu Csal_0851 205 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 92113172 Common - TonB-dependent receptor Csal_1044 114 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 92113617 Common - cob(I)alamin adenosyltransferase Csal_1493 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 92112186 Common - Pirin-like protein Csal_0050 144 COG1741 COG1741, Pirin-related protein General function prediction only 92113549 Common - Na+/H+ antiporter NhaC Csal_1424 74 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 92115294 Common - type III effector Hrp-dependent outers Csal_3179 58 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 92112947 Common - peptidase S15 Csal_0819 70 COG2936 COG2936, Predicted acyl esterases General function prediction only 92113873 Common - transcriptional regulator, GntR family Csal_1750 34 COG1802 GntR, Transcriptional regulators Transcription 92115422 Common - Ham1-like protein Csal_3307 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 92112420 Common - oxidoreductase-like protein Csal_0286 170 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 92114256 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Csal_2134 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 92114703 Common - riboflavin biosynthesis protein RibD Csal_2585 223 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 92112319 Common - NLP/P60 Csal_0184 162 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 92113467 Nonpathogen - hypothetical protein Csal_1341 1 None None None 92112702 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase Csal_0569 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 92114553 Common lolA outer-membrane lipoprotein carrier protein Csal_2435 84 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 92114242 Common - methionyl-tRNA synthetase Csal_2120 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92114025 Common - binding-protein-dependent transport systems inner membrane component Csal_1902 191 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 92115361 Common - hypothetical protein Csal_3246 7 None None None 92113308 Common - Glutamate--ammonia ligase Csal_1181 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 92112179 Common - transcriptional regulator, AraC family Csal_0043 113 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92112867 Common - hypothetical protein Csal_0736 4 None None None 92114897 Common - Twin-arginine translocation pathway signal Csal_2779 58 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 92115022 Common - hypothetical protein Csal_2905 11 None None None 92115392 Common - MltA Csal_3277 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 92113022 Common - diguanylate cyclase/phosphodiesterase Csal_0894 165 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 92113361 Common - FeS assembly protein SufD Csal_1235 166 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 92113002 Common - DNA polymerase III subunit epsilon Csal_0874 67 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 92114352 Common - HPrNtr Csal_2230 140 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 92114149 Common - transcriptional activator FlhC Csal_2027 27 None None None 92114735 Common - Glycine hydroxymethyltransferase Csal_2617 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 92115021 Common - hypothetical protein Csal_2904 5 COG1578 COG1578, Uncharacterized conserved protein Function unknown 92115220 Common - Xanthine/uracil/vitamin C permease Csal_3105 137 COG2252 COG2252, Permeases General function prediction only 92114469 Common - peptidase S15 Csal_2349 73 COG2936 COG2936, Predicted acyl esterases General function prediction only 92114636 Common - hypothetical protein Csal_2518 2 None None None 92114215 Common - ABC transporter related Csal_2093 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92115324 Common - protein of unknown function DUF1007 Csal_3209 32 COG3683 COG3683, ABC-type uncharacterized transport system, periplasmic component General function prediction only 92112261 Common - methyl-accepting chemotaxis sensory transducer Csal_0126 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92115212 Common - ferric uptake regulator, FUR family Csal_3097 188 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 92115188 Common - ribosome-binding factor A Csal_3073 190 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 92112233 Common - Polyprenyl synthetase Csal_0098 239 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 92113559 Common - isocitrate dehydrogenase Csal_1434 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 92113083 Common - Cytochrome-c oxidase Csal_0955 166 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 92112248 Common - ABC transporter related Csal_0113 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 92112695 Common - methionine aminopeptidase, type I Csal_0562 246 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 92114926 Common - short-chain dehydrogenase/reductase SDR Csal_2809 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113041 Common - S-adenosylmethionine decarboxylase Csal_0913 30 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 92113683 Common - Pyruvate kinase Csal_1559 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 92115174 Common - sugar fermentation stimulation protein Csal_3059 105 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 92113707 Common - Lipoprotein releasing system, ATP-binding protein Csal_1583 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 92113425 Common - hypothetical protein Csal_1299 37 COG3528 COG3528, Uncharacterized protein conserved in bacteria Function unknown 92114181 Common - OmpA-like transmembrane region Csal_2059 27 None None None 92112842 Common - adenylate cyclase Csal_0710 58 COG3025 COG3025, Uncharacterized conserved protein Function unknown 92112671 Common - hypothetical protein Csal_0538 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 92114792 Common - protein of unknown function DUF6, transmembrane Csal_2674 49 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 92112476 Common - ferredoxin Csal_0343 112 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 92113679 Common - acetyl-CoA carboxylase Csal_1555 238 COG0439 AccC, Biotin carboxylase Lipid metabolism 92112361 Common - HipA-like protein Csal_0226 61 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 92115101 Common slmA nucleoid occlusion protein Csal_2985 48 COG1309 AcrR, Transcriptional regulator Transcription 92114220 Common - adenine phosphoribosyltransferase Csal_2098 186 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 92115031 Nonpathogen - hypothetical protein Csal_2915 1 None None None 92113792 Common - cold-shock DNA-binding domain protein Csal_1668 181 COG1278 CspC, Cold shock proteins Transcription 92113234 Common - Carboxylesterase Csal_1107 97 COG0400 COG0400, Predicted esterase General function prediction only 92112345 Common - binding-protein-dependent transport systems inner membrane component Csal_0210 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 92112208 Common - Uncharacterized protein UPF0065 Csal_0073 74 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92114834 Common - protein of unknown function DUF6, transmembrane Csal_2716 88 COG2962 RarD, Predicted permeases General function prediction only 92112612 Common - integral membrane protein MviN Csal_0479 189 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 92114232 Common - Chromosomal replication initiator, DnaA Csal_2110 202 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 92114239 Common - hypothetical protein Csal_2117 8 None None None 92114086 Common - Flagellar motor switch FliN Csal_1963 124 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 92115356 Nonpathogen - hypothetical protein Csal_3241 4 None None None 92112489 Common - Glycerone kinase Csal_0356 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 92113948 Common - 3-hydroxybutyrate dehydrogenase Csal_1825 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92115193 Common - Triosephosphate isomerase Csal_3078 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 92114555 Common aat leucyl/phenylalanyl-tRNA--protein transferase Csal_2437 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 92113070 Nonpathogen - hypothetical protein Csal_0942 1 None None None 92112632 Common - ATPase AAA-2 Csal_0499 220 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 92113525 Common - protein of unknown function DUF264 Csal_1399 25 COG5484 COG5484, Uncharacterized conserved protein Function unknown 92112690 Common - succinyl-diaminopimelate desuccinylase Csal_0557 202 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 92112758 Common - alanyl-tRNA synthetase Csal_0625 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92114847 Common - transcriptional regulator, LysR family Csal_2729 175 COG0583 LysR, Transcriptional regulator Transcription 92114676 Common - GreA/GreB family elongation factor Csal_2558 195 COG0782 GreA, Transcription elongation factor Transcription 92115017 Common - BFD-like (2Fe-2S)-binding protein Csal_2900 35 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 92113050 Common apaH diadenosine tetraphosphatase Csal_0922 81 None None None 92112898 Common - Saccharopine dehydrogenase Csal_0770 9 None None None 92114726 Nonpathogen - hypothetical protein Csal_2608 1 None None None 92113003 Common - PP-loop Csal_0875 165 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 92114529 Common - SirA-like protein Csal_2411 102 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 92114663 Common - protein of unknown function UPF0227 Csal_2545 48 COG3150 COG3150, Predicted esterase General function prediction only 92112320 Common - transcriptional regulator, LysR family Csal_0185 177 COG0583 LysR, Transcriptional regulator Transcription 92112244 Nonpathogen - hypothetical protein Csal_0109 1 None None None 92115409 Common - methyltransferase GidB Csal_3294 138 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 92114454 Common - SH3-like region Csal_2333 38 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 92113695 Common - Na(+)-translocating NADH-quinone reductase subunit C Csal_1571 50 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 92113477 Common - ABC transporter related Csal_1351 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 92112992 Common - Protein of unknown function SprT Csal_0864 26 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 92114399 Common - hypothetical protein Csal_2278 4 None None None 92113907 Common - monooxygenase, FAD-binding Csal_1784 80 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 92114068 Common - Lytic transglycosylase Csal_1945 137 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 92115244 Common - NADH-quinone oxidoreductase, E subunit Csal_3129 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 92113919 Common - hypothetical protein Csal_1796 6 None None None 92113713 Common - 3-deoxy-D-manno-octulosonate cytidylyltransferase Csal_1589 144 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 92112512 Common - Ribonucleoside-diphosphate reductase Csal_0379 221 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 92114042 Common - molybdopterin binding protein Csal_1919 153 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 92113287 Common - peptidase C26 Csal_1160 121 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 92113458 Common - nitrate reductase molybdenum cofactor assembly chaperone Csal_1332 56 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 92115104 Common - ABC transporter related Csal_2988 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 92112705 Common - outer membrane chaperone Skp (OmpH) Csal_0572 8 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 92112411 Common - aldehyde dehydrogenase Csal_0277 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92115161 Common - protein of unknown function DUF328 Csal_3046 87 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 92113343 Common kgd alpha-ketoglutarate decarboxylase Csal_1217 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 92114052 Nonpathogen - hypothetical protein Csal_1929 1 None None None 92112699 Common - ribosome recycling factor Csal_0566 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 92114310 Common - D-alanine--D-alanine ligase Csal_2188 215 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 92114444 Common - anthranilate synthase component I Csal_2323 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 92112920 Common - hypothetical protein Csal_0792 3 None None None 92113748 Common dinG ATP-dependent DNA helicase DinG Csal_1624 137 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 92114728 Common - extracellular solute-binding protein, family 1 Csal_2610 76 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92114094 Common flgI flagellar basal body P-ring protein Csal_1971 104 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 92115038 Common - valyl-tRNA synthetase Csal_2922 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92113407 Common hisZ ATP phosphoribosyltransferase regulatory subunit Csal_1281 141 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 92113096 Common - two component transcriptional regulator, winged helix family Csal_0968 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92114104 Common - FlgN Csal_1981 20 COG3418 COG3418, Flagellar biosynthesis/type III secretory pathway chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 92112237 Common - two component heavy metal response transcriptional regulator, winged helix family Csal_0102 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92112719 Common - oxidoreductase FAD/NAD(P)-binding Csal_0586 83 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 92112259 Nonpathogen - hypothetical protein Csal_0124 1 None None None 92114932 Common - hypothetical protein Csal_2815 11 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 92112735 Common argS arginyl-tRNA synthetase Csal_0602 247 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92112688 Common - cold-shock DNA-binding domain protein Csal_0555 175 COG1278 CspC, Cold shock proteins Transcription 92114691 Common - prolipoprotein diacylglyceryl transferase Csal_2573 208 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 92112900 Common - hypothetical protein Csal_0772 38 COG4338 COG4338, Uncharacterized protein conserved in bacteria Function unknown 92113197 Common - hypothetical protein Csal_1069 29 COG4691 StbC, Plasmid stability protein General function prediction only 92115418 Common - thiamine-phosphate pyrophosphorylase Csal_3303 157 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 92113353 Common - hypothetical protein Csal_1227 13 None None None 92112159 Common - hypothetical protein Csal_0023 24 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 92113605 Common - major facilitator superfamily MFS_1 Csal_1481 30 None None None 92113658 Common - 6-phosphofructokinase Csal_1534 101 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 92114153 Common - hypothetical protein Csal_2031 13 None None None 92114648 Common - tRNA synthetase, class II (D, K and N) Csal_2530 201 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 92112729 Common - protein of unknown function DUF1243 Csal_0596 44 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 92113042 Common - OsmC-like protein Csal_0914 87 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 92112142 Common - Glycine--tRNA ligase Csal_0006 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 92113184 Common - TonB-dependent receptor Csal_1056 53 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 92113915 Nonpathogen - hypothetical protein Csal_1792 1 None None None 92112408 Common - PfkB Csal_0274 178 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 92112300 Common - protein of unknown function DUF112, transmembrane Csal_0165 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92113219 Common - GCN5-related N-acetyltransferase Csal_1092 168 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 92112201 Common - transcriptional regulator, IclR family Csal_0066 121 COG1414 IclR, Transcriptional regulator Transcription 92112673 Common - Gamma-butyrobetaine,2-oxoglutarate dioxygenase Csal_0540 11 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 92114049 Nonpathogen - hypothetical protein Csal_1926 1 None None None 92113839 Common - glycosyl transferase, group 1 Csal_1716 220 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92112657 Common - hypothetical protein Csal_0524 62 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 92114547 Common - thioredoxin Csal_2429 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 92115342 Nonpathogen - aminoglycoside phosphotransferase Csal_3227 2 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 92114845 Common - Oxidoreductase alpha (molybdopterin) subunit Csal_2727 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 92114993 Common - diguanylate cyclase Csal_2876 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92115300 Nonpathogen - hypothetical protein Csal_3185 1 None None None 92112309 Common - ChaC-like protein Csal_0174 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 92114462 Common - plasmid maintenance system antidote protein, XRE family Csal_2342 71 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 92114400 Common - hypothetical protein Csal_2279 7 None None None 92113205 Common - hypothetical protein Csal_1077 25 COG3410 COG3410, Uncharacterized conserved protein Function unknown 92114312 Common - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Csal_2190 205 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 92113384 Common - hypothetical protein Csal_1258 18 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 92114050 Common - protein of unknown function UPF0005 Csal_1927 75 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 92113221 Common - UspA Csal_1094 89 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 92112741 Common - type IV pilus assembly protein PilM Csal_0608 79 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 92114957 Common - hypothetical protein Csal_2840 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 92112820 Common - diguanylate cyclase Csal_0688 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92113992 Common - Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Csal_1869 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 92113456 Common - nitrate reductase, alpha subunit Csal_1330 115 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 92114833 Common - hypothetical protein Csal_2715 14 None None None 92114335 Common hisG ATP phosphoribosyltransferase catalytic subunit Csal_2213 210 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 92112793 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_0661 14 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92114981 Common - SUA5/yciO/yrdC-like protein Csal_2864 197 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 92112730 Common - ubiquinone/menaquinone biosynthesis methyltransferases Csal_0597 224 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 92115266 Common - Adhesin HecA 20-residue repeat x2 Csal_3151 65 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 92114137 Common - flagellar biosynthesis protein FlhA Csal_2015 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 92113933 Common - transcriptional regulator, LysR family Csal_1810 179 COG0583 LysR, Transcriptional regulator Transcription 92112769 Common - ABC transporter related Csal_0636 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92113511 Common - Phage tail protein I Csal_1385 26 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 92114286 Common - cytidylate kinase Csal_2164 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 92113848 Common - putative leucine/isoleucine/valine-binding protein precursor Csal_1725 103 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 92115275 Common - protein of unknown function DUF526 Csal_3160 6 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 92113261 Common - peptidase M23B Csal_1134 187 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 92114354 Common - peptidase U62, modulator of DNA gyrase Csal_2232 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 92112745 Common - type II and III secretion system protein Csal_0612 140 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 92112293 Common - hypothetical protein Csal_0158 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 92112648 Common - protein of unknown function DUF416 Csal_0515 25 COG3068 COG3068, Uncharacterized protein conserved in bacteria Function unknown 92114298 Common - Prepilin peptidase Csal_2176 151 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 92113010 Common - hypothetical protein Csal_0882 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 92113830 Common - 3-hydroxyisobutyrate dehydrogenase Csal_1707 162 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 92112442 Common - benzoylformate decarboxylase Csal_0308 220 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 92114520 Common - protein of unknown function DUF462 Csal_2402 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 92113072 Common - Potassium efflux system protein Csal_0944 199 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 92114106 Common - adenosine deaminase Csal_1983 102 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 92115085 Common - formamidopyrimidine-DNA glycosylase Csal_2969 179 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 92112213 Common - polysaccharide deacetylase Csal_0078 69 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 92115111 Common - major facilitator superfamily MFS_1 Csal_2995 182 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92114534 Common - extracellular solute-binding protein, family 1 Csal_2416 63 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92112870 Common - Lysine exporter protein (LYSE/YGGA) Csal_0741 102 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92114918 Common - NAD(P)H dehydrogenase (quinone) Csal_2801 47 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 92113821 Nonpathogen - hypothetical protein Csal_1698 1 None None None 92115425 Common - protein of unknown function DUF519 Csal_3310 84 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 92113743 Common - TonB-like protein Csal_1619 31 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 92113593 Common - ATP-dependent helicase HrpA Csal_1469 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 92112856 Common - protein of unknown function DUF112, transmembrane Csal_0724 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92113632 Common - Alcohol dehydrogenase, zinc-binding Csal_1508 193 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92112152 Common - glycosyl transferase, family 9 Csal_0016 104 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 92114082 Common - Flagellar export FliJ Csal_1959 38 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 92115312 Nonpathogen - hypothetical protein Csal_3197 1 None None None 92114162 Common - hypothetical protein Csal_2040 16 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 92113764 Common - phosphoenolpyruvate carboxylase Csal_1640 118 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 92114802 Common - short-chain dehydrogenase/reductase SDR Csal_2684 229 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 92114757 Common - Septum formation initiator Csal_2639 64 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 92114070 Common - binding-protein-dependent transport systems inner membrane component Csal_1947 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 92114537 Common prpD 2-methylcitrate dehydratase Csal_2419 57 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 92114697 Common - malate:quinone oxidoreductase Csal_2579 58 COG0579 COG0579, Predicted dehydrogenase General function prediction only 92114390 Common - protein of unknown function DUF877 Csal_2269 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 92112808 Common - hypothetical protein Csal_0676 40 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 92114581 Common - Poly(R)-hydroxyalkanoic acid synthase, class I Csal_2463 74 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 92114719 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_2601 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 92114364 Common - glutamyl-tRNA(Gln) amidotransferase, A subunit Csal_2242 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 92112795 Common - peptidase M15D, vanX D-ala-D-ala dipeptidase Csal_0663 41 COG2173 DdpX, D-alanyl-D-alanine dipeptidase Cell envelope biogenesis, outer membrane 92115246 Common - NADH dehydrogenase subunit B Csal_3131 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 92112800 Common - ribonucleotide-diphosphate reductase subunit alpha Csal_0668 228 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 92114809 Common - Oxidoreductase alpha (molybdopterin) subunit Csal_2691 170 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 92113277 Common - nuclease SbcCD, D subunit Csal_1150 82 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 92113161 Common - transcriptional regulator, RpiR family Csal_1033 29 COG1737 RpiR, Transcriptional regulators Transcription 92113663 Nonpathogen - diguanylate cyclase Csal_1539 2 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92113306 Common - CDP-alcohol phosphatidyltransferase Csal_1179 18 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 92112280 Common - protein of unknown function DUF1232 Csal_0145 45 COG3339 COG3339, Uncharacterized conserved protein Function unknown 92114951 Common - preprotein translocase, YajC subunit Csal_2834 172 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 92115432 Common - ribonuclease P protein component Csal_3317 66 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 92113208 Common - hypothetical protein Csal_1080 5 None None None 92114006 Common - Phosphoribosyl-AMP cyclohydrolase Csal_1883 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 92113231 Common - Integral membrane protein TerC Csal_1104 90 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 92112606 Common - Trans-hexaprenyltranstransferase Csal_0473 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 92113009 Common - putative serine protein kinase, PrkA Csal_0881 70 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 92112554 Common - ribosomal protein L3 Csal_0421 245 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 92112357 Common - ABC transporter related Csal_0222 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 92112566 Common rplE 50S ribosomal protein L5 Csal_0433 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 92114127 Common - arsenite-activated ATPase (arsA) Csal_2005 89 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 92113771 Common - diguanylate cyclase Csal_1647 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92112169 Common - methyl-accepting chemotaxis sensory transducer Csal_0033 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92113512 Common - Baseplate J-like protein Csal_1386 36 COG3948 COG3948, Phage-related baseplate assembly protein General function prediction only 92113448 Common - ATP-dependent DNA helicase, RecQ family Csal_1322 234 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 92112227 Common - transcriptional regulator, RpiR family Csal_0092 95 COG1737 RpiR, Transcriptional regulators Transcription 92112585 Common - Oxidoreductase FAD-binding protein Csal_0452 126 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 92112506 Common - LrgB-like protein Csal_0373 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 92114077 Common - flagellar hook-basal body complex protein (FliE) Csal_1954 45 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 92112832 Common - signal transduction histidine kinase regulating citrate/malate metabolism Csal_0700 204 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 92114666 Common - methyltransferase, putative Csal_2548 53 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 92114061 Common - predicted inner membrane peptidase Csal_1938 187 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 92112630 Common - Pseudouridine synthase, RluD Csal_0497 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 92115230 Common - phage integrase Csal_3115 225 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 92114562 Common - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Csal_2444 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 92115041 Common - Amino acid/peptide transporter Csal_2925 79 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 92113266 Common - DEAD/DEAH box helicase-like protein Csal_1139 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 92114608 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Csal_2490 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 92113107 Common - DNA polymerase III subunit epsilon Csal_0979 55 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 92113624 Common - Radical SAM Csal_1500 106 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 92114649 Common - translation elongation factor P Csal_2531 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 92113644 Common - putative aminopeptidase 2 Csal_1520 44 COG1362 LAP4, Aspartyl aminopeptidase Amino acid transport and metabolism 92114789 Common - TRAP transporter solute receptor, TAXI family Csal_2671 88 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 92114749 Common - sigma 28 (Flagella/Sporulation) Csal_2631 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 92113639 Common - betaine aldehyde dehydrogenase Csal_1515 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113757 Common - DNA repair protein RecO Csal_1633 58 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 92113910 Common - protein of unknown function DUF182 Csal_1787 73 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 92113318 Common - transcriptional regulator, LuxR family Csal_1191 56 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92112817 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Csal_0685 127 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 92115239 Common - NADH dehydrogenase (quinone) Csal_3124 26 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 92115090 Common - mandelate racemase/muconate lactonizing enzyme Csal_2974 111 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92113697 Common - Na(+)-translocating NADH-quinone reductase subunit E Csal_1573 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 92113253 Common - methylmalonate-semialdehyde dehydrogenase Csal_1126 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113582 Common - DNA polymerase III subunits gamma and tau Csal_1458 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 92114513 Common - transcriptional regulator SlyA Csal_2395 104 COG1846 MarR, Transcriptional regulators Transcription 92112881 Common - protein of unknown function DUF808 Csal_0752 60 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 92114750 Common - peptidase M23B Csal_2632 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 92115073 Common - Peptidase M20C, Xaa-His dipeptidase Csal_2957 59 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 92114888 Common - Gamma-butyrobetaine,2-oxoglutarate dioxygenase Csal_2770 10 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 92112266 Common - hypothetical protein Csal_0131 5 None None None 92115396 Common - transcriptional regulator, DeoR family Csal_3281 111 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 92115323 Common - high-affinity nickel-transporter Csal_3208 33 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 92112302 Common - Cupin 2 protein Csal_0167 15 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 92112980 Common - quinolinate synthetase Csal_0852 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 92113017 Common - ribosomal protein S18 Csal_0889 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 92113339 Common - succinate dehydrogenase, cytochrome b subunit Csal_1213 72 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 92113961 Common - ribonuclease BN, putative Csal_1838 47 COG1295 Rbn, Predicted membrane protein Function unknown 92113126 Common - sarcosine oxidase, beta subunit family Csal_0998 130 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92113295 Common - exodeoxyribonuclease V, gamma subunit Csal_1168 64 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 92112524 Nonpathogen - branched-chain amino acid transport Csal_0391 1 None None None 92114264 Common - NusG antitermination factor Csal_2142 100 COG0250 NusG, Transcription antiterminator Transcription 92113395 Common - ribosome-associated GTPase Csal_1269 163 COG1162 COG1162, Predicted GTPases General function prediction only 92114591 Common - GntR-like protein Csal_2473 113 COG2186 FadR, Transcriptional regulators Transcription 92113436 Common - hypothetical protein Csal_1310 21 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 92114414 Common folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase Csal_2293 46 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 92114850 Common - peptidase M24 Csal_2732 177 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 92114907 Nonpathogen - hypothetical protein Csal_2790 3 None None None 92112964 Common - Alcohol dehydrogenase GroES-like protein Csal_0836 195 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 92114271 Common - hypothetical protein Csal_2149 34 COG1289 COG1289, Predicted membrane protein Function unknown 92112962 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Csal_0834 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 92115152 Nonpathogen - hypothetical protein Csal_3037 1 None None None 92113032 Common - Lytic murein transglycosylase Csal_0904 104 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 92114946 Nonpathogen - hypothetical protein Csal_2829 1 COG3895 COG3895, Predicted periplasmic protein General function prediction only 92112665 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_0532 168 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 92112917 Common - short-chain dehydrogenase/reductase SDR Csal_0789 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113937 Common - amino acid carrier protein Csal_1814 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 92113750 Common algU RNA polymerase sigma factor AlgU Csal_1626 171 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 92115162 Common - import inner membrane translocase, subunit Tim44 Csal_3047 32 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 92113956 Common - excinuclease ABC subunit B Csal_1833 229 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 92115381 Common - Phosphate transport system permease protein 2 Csal_3266 217 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 92112434 Common - coenzyme A transferase Csal_0300 76 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 92114057 Common - NLPA lipoprotein Csal_1934 98 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 92112910 Common - succinate dehydrogenase cytochrome b subunit family protein Csal_0782 7 COG4244 COG4244, Predicted membrane protein Function unknown 92113987 Common - protein of unknown function DUF490 Csal_1864 100 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 92114936 Common - SirA-like protein Csal_2819 92 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 92115049 Common - putative methyltransferase Csal_2933 13 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 92113893 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Csal_1770 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 92112374 Common - GTP-binding protein TypA Csal_0239 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 92112220 Common - putative transcriptional regulator Csal_0085 65 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 92112545 Common - ribosomal protein L10 Csal_0412 208 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 92113791 Nonpathogen - hypothetical protein Csal_1667 1 None None None 92114742 Common - putative PAS/PAC sensor protein Csal_2624 124 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 92115349 Common - DNA-directed RNA polymerase, omega subunit Csal_3234 112 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 92114386 Common - lipoprotein, putative Csal_2265 24 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 92115057 Nonpathogen - hypothetical protein Csal_2941 1 None None None 92113376 Common - transcriptional regulator, AraC family Csal_1250 150 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92114452 Common - hypothetical protein Csal_2331 3 COG3056 COG3056, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 92114614 Common - Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase Csal_2496 31 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 92115007 Common - DTW Csal_2890 40 COG3148 COG3148, Uncharacterized conserved protein Function unknown 92113733 Common - TatD-related deoxyribonuclease Csal_1609 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 92112828 Common - putative prophage repressor Csal_0696 173 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 92112149 Common - glycosyl transferase, group 1 Csal_0013 211 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92114683 Nonpathogen - hypothetical protein Csal_2565 1 None None None 92114968 Common - hypothetical protein Csal_2851 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 92112251 Common - uroporphyrinogen decarboxylase Csal_0116 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 92112312 Common - protein of unknown function DUF1470 Csal_0177 29 COG5516 COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding General function prediction only 92113567 Common - hypothetical protein Csal_1443 4 None None None 92113518 Common - glycoside hydrolase, family 24 Csal_1392 51 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 92114419 Common - Na+/solute symporter Csal_2298 144 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92114152 Common - hypothetical protein Csal_2030 11 None None None 92115143 Common - hypothetical protein Csal_3028 29 None None None 92113568 Nonpathogen - hypothetical protein Csal_1444 3 COG5393 COG5393, Predicted membrane protein Function unknown 92113860 Common - 5-carboxymethyl-2-hydroxymuconate delta-isomerase Csal_1737 183 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 92114179 Common - protein of unknown function DUF1289 Csal_2057 5 COG3313 COG3313, Predicted Fe-S protein General function prediction only 92113169 Common - transport system permease protein Csal_1041 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92113153 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_1025 16 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92113790 Common - diguanylate cyclase/phosphodiesterase Csal_1666 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 92112412 Common - p-hydroxycinnamoyl CoA hydratase/lyase Csal_0278 183 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 92112923 Common - sodium:dicarboxylate symporter Csal_0795 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 92113871 Common - mandelate racemase/muconate lactonizing enzyme Csal_1748 110 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92112957 Common - phosphopentomutase Csal_0829 71 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 92113693 Common - Na(+)-translocating NADH-quinone reductase subunit A Csal_1569 40 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 92114724 Common - KDPG and KHG aldolase Csal_2606 107 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 92114458 Common - putative metal ion transporter Csal_2337 216 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 92114701 Common - Riboflavin synthase Csal_2583 229 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 92113288 Nonpathogen - hypothetical protein Csal_1161 10 None None None 92113906 Common - two component transcriptional regulator, winged helix family Csal_1783 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92115315 Common - HpcH/HpaI aldolase Csal_3200 105 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 92113174 Common - amino acid permease-associated region Csal_1046 101 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 92114443 Nonpathogen - hypothetical protein Csal_2322 1 None None None 92112239 Common - Methyltransferase type 11 Csal_0104 3 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 92113245 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csal_1118 200 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 92112490 Common - sugar-phosphate isomerases, RpiB/LacA/LacB family Csal_0357 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 92112221 Common - restriction modification system DNA specificity protein Csal_0086 63 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 92114678 Common - SmtA protein Csal_2560 68 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 92114992 Common - TraB family protein Csal_2875 38 COG1916 COG1916, Uncharacterized homolog of PrgY (pheromone shutdown protein) Function unknown 92115245 Common - bifunctional NADH:ubiquinone oxidoreductase subunit C/D Csal_3130 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 92114634 Common - transcriptional regulator, AsnC family Csal_2516 159 COG1522 Lrp, Transcriptional regulators Transcription 92114652 Common - hypothetical protein Csal_2534 12 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 92114330 Common - AFG1-like ATPase Csal_2208 102 COG1485 COG1485, Predicted ATPase General function prediction only 92114453 Common - Thiopurine S-methyltransferase Csal_2332 36 None None None 92113701 Common - soluble pyridine nucleotide transhydrogenase Csal_1577 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 92115306 Common - succinic semialdehyde dehydrogenase Csal_3191 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113891 Common - protein of unknown function DUF112, transmembrane Csal_1768 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92114550 Common - Lysine exporter protein (LYSE/YGGA) Csal_2432 77 COG1279 COG1279, Lysine efflux permease General function prediction only 92113296 Common - exodeoxyribonuclease V, beta subunit Csal_1169 187 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 92112990 Common - phospholipase D/Transphosphatidylase Csal_0862 143 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 92113056 Common - protein of unknown function DUF340, membrane Csal_0928 48 COG2431 COG2431, Predicted membrane protein Function unknown 92113411 Common mdoG glucan biosynthesis protein G Csal_1285 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 92113735 Common - UvrD/REP helicase Csal_1611 229 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 92113073 Common - aminoglycoside phosphotransferase Csal_0945 69 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 92114014 Common - nitrite and sulphite reductase 4Fe-4S region Csal_1891 159 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 92115373 Common - TonB-dependent siderophore receptor Csal_3258 108 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 92114199 Common - molybdopterin biosynthesis MoaE Csal_2077 159 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 92113281 Common - GCN5-related N-acetyltransferase Csal_1154 78 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 92113504 Common - phage major tail tube protein Csal_1378 29 COG3498 COG3498, Phage tail tube protein FII General function prediction only 92112475 Common - TRAP transporter solute receptor, TAXI family Csal_0342 47 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 92115144 Common - Acetoacetyl-CoA reductase Csal_3029 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114716 Common - protein of unknown function DUF395, YeeE/YedE Csal_2598 9 COG2391 COG2391, Predicted transporter component General function prediction only 92112721 Common - phospho-2-dehydro-3-deoxyheptonate aldolase Csal_0588 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 92114660 Common - phosphoserine phosphatase SerB Csal_2542 158 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 92112897 Common - hypothetical protein Csal_0769 25 COG4320 COG4320, Uncharacterized protein conserved in bacteria Function unknown 92113615 Common - protein of unknown function DUF541 Csal_1491 84 COG2968 COG2968, Uncharacterized conserved protein Function unknown 92112625 Common - Tfp pilus assembly protein PilX-like protein Csal_0492 3 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 92114865 Nonpathogen - hypothetical protein Csal_2747 1 None None None 92112764 Common - periplasmic sensor signal transduction histidine kinase Csal_0631 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92115292 Common - GntR-like protein Csal_3177 140 COG2186 FadR, Transcriptional regulators Transcription 92113553 Common - heat shock protein DnaJ-like protein Csal_1428 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 92115171 Common - protein of unknown function YGGT Csal_3056 101 COG0762 COG0762, Predicted integral membrane protein Function unknown 92112242 Common - small multidrug resistance protein Csal_0107 110 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 92112194 Common - Holliday junction resolvase YqgF Csal_0059 177 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 92114244 Common - endonuclease III Csal_2122 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 92114105 Nonpathogen - hypothetical protein Csal_1982 1 None None None 92115125 Common - homoserine dehydrogenase Csal_3010 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 92112840 Common - Sua5/YciO/YrdC/YwlC Csal_0708 220 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 92112865 Nonpathogen - hypothetical protein Csal_0733 1 None None None 92113404 Common - GTP-binding protein, HSR1-related Csal_1278 225 COG2262 HflX, GTPases General function prediction only 92113802 Common - HicB Csal_1678 24 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 92112848 Nonpathogen - hypothetical protein Csal_0716 1 None None None 92112895 Common - oxidoreductase-like protein Csal_0767 145 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 92114182 Common - ribonuclease activity regulator protein RraA Csal_2060 87 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 92112914 Common - major facilitator superfamily MFS_1 Csal_0786 149 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92112712 Common - acetyl-CoA carboxylase carboxyltransferase subunit alpha Csal_0579 179 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 92115028 Common - Alcohol dehydrogenase, zinc-binding Csal_2912 215 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 92115195 Common - dihydropteroate synthase Csal_3080 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 92113094 Nonpathogen - hypothetical protein Csal_0966 1 None None None 92114625 Common - lipid kinase Csal_2507 115 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 92113503 Common - phage tail E Csal_1377 19 None None None 92114772 Common - Glutamate--cysteine ligase, monofunctional Csal_2654 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 92113117 Common - hypothetical protein Csal_0989 10 None None None 92113028 Common - cation antiporter Csal_0900 72 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 92112235 Common - heat shock protein DnaJ-like protein Csal_0100 107 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 92112782 Common - short chain dehydrogenase Csal_0649 227 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 92112363 Common - hypothetical protein Csal_0228 12 None None None 92114795 Common - molybdenum ABC transporter, periplasmic molybdate-binding protein Csal_2677 129 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 92115389 Common - sodium:neurotransmitter symporter Csal_3274 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 92114895 Common - Hemerythrin HHE cation binding protein Csal_2777 16 None None None 92115320 Common - exodeoxyribonuclease III Csal_3205 194 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 92112344 Common - response regulator receiver (CheY-like) and ANTAR domain protein Csal_0209 36 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 92114024 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_1901 87 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92112209 Common - transcriptional regulator, LacI family Csal_0074 126 COG1609 PurR, Transcriptional regulators Transcription 92112693 Common - hypothetical protein Csal_0560 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 92115284 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_3169 64 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92115363 Nonpathogen - hypothetical protein Csal_3248 1 None None None 92114008 Common - Fe-S metabolism associated SufE Csal_1885 103 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 92114560 Common - Pseudouridine synthase, Rsu Csal_2442 199 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 92115210 Common - GrpE protein Csal_3095 227 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 92113136 Common - protein of unknown function DUF533 Csal_1008 38 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 92114211 Common - extracellular solute-binding protein, family 1 Csal_2089 37 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92115219 Common - MscS Mechanosensitive ion channel Csal_3104 113 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 92112379 Common - hypothetical protein Csal_0244 16 None None None 92113067 Common - diguanylate cyclase with PAS/PAC sensor Csal_0939 187 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92114738 Common - Arylesterase Csal_2620 100 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 92112514 Common - transcriptional regulator, LysR family Csal_0381 166 COG0583 LysR, Transcriptional regulator Transcription 92112499 Common - mandelate racemase/muconate lactonizing enzyme Csal_0366 91 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92113539 Common - short-chain dehydrogenase/reductase SDR Csal_1414 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113580 Nonpathogen - hypothetical protein Csal_1456 3 None None None 92115033 Common - permease YjgP/YjgQ Csal_2917 111 COG0795 COG0795, Predicted permeases General function prediction only 92113530 Nonpathogen - hypothetical protein Csal_1404 1 None None None 92115187 Common - tRNA pseudouridine synthase B Csal_3072 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 92112853 Common - TRAP dicarboxylate transporter, DctP subunit Csal_0721 106 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92115071 Common - Peptidase C56, PfpI Csal_2955 170 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 92113659 Common - UDP-N-acetylmuramate Csal_1535 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 92114713 Common - periplasmic sensor signal transduction histidine kinase Csal_2595 203 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92112834 Common - protein of unknown function UPF0270 Csal_0702 8 COG3089 COG3089, Uncharacterized protein conserved in bacteria Function unknown 92115354 Common - Hydrophobe/amphiphile efflux-1 HAE1 Csal_3239 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 92115034 Common - Leucyl aminopeptidase Csal_2918 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 92114292 Common - phospholipid/glycerol acyltransferase Csal_2170 17 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 92114508 Common - Inorganic diphosphatase Csal_2390 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 92114783 Common - ATP-dependent protease La Csal_2665 213 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 92114527 Common - TRAP transporter, 4TM/12TM fusion protein Csal_2409 67 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 92114658 Common - transcriptional regulator, AraC family Csal_2540 20 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92114349 Common - sigma 54 modulation protein/ribosomal protein S30EA Csal_2227 144 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 92115348 Common - Guanylate kinase Csal_3233 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 92112941 Common - protein of unknown function DUF477 Csal_0813 44 COG3762 COG3762, Predicted membrane protein Function unknown 92114488 Nonpathogen - hypothetical protein Csal_2368 3 None None None 92114756 Common - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Csal_2638 173 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 92112708 Common - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Csal_0575 183 COG1043 LpxA, Acyl- acyl carrier protein 92113599 Common - Drug resistance transporter Bcr/CflA subfamily Csal_1475 205 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113857 Common - Mannitol dehydrogenase-like protein Csal_1734 79 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 92112595 Common - FAD dependent oxidoreductase Csal_0462 69 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 92113451 Common - hypothetical protein Csal_1325 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 92113439 Common - cytochrome B561 Csal_1313 75 COG3038 CybB, Cytochrome B561 Energy production and conversion 92114254 Common - two component transcriptional regulator, LuxR family Csal_2132 219 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92114732 Common - ABC transporter related Csal_2614 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92112707 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase Csal_0574 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 92112534 Common - anhydrase, family 3 protein Csal_0401 198 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 92114351 Common - hypothetical protein Csal_2229 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 92113345 Common - Dihydrolipoamide dehydrogenase Csal_1219 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 92114328 Common - ribosomal protein S9 Csal_2206 245 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 92113327 Common - tRNA-dihydrouridine synthase A Csal_1200 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 92114095 Common - flagellar L-ring protein Csal_1972 99 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 92114999 Common - transcriptional regulator, LysR family Csal_2882 181 COG0583 LysR, Transcriptional regulator Transcription 92113785 Common - type II secretion system protein Csal_1661 25 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 92115204 Common - periplasmic binding protein Csal_3089 88 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 92114056 Common - binding-protein-dependent transport systems inner membrane component Csal_1933 189 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 92114078 Common - flagellar M-ring protein FliF Csal_1955 125 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 92115426 Common - protein of unknown function DUF451 Csal_3311 27 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 92113813 Nonpathogen - hypothetical protein Csal_1690 2 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92113673 Common - Serine-type D-Ala-D-Ala carboxypeptidase Csal_1549 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 92112568 Common - ribosomal protein S8 Csal_0435 245 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 92113689 Common - ErfK/YbiS/YcfS/YnhG Csal_1565 37 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 92112253 Nonpathogen - VanZ like protein Csal_0118 1 COG5652 COG5652, Predicted integral membrane protein Function unknown 92113594 Common - 3-oxoacyl-(acyl carrier protein) synthase III Csal_1470 201 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 92114071 Common - binding-protein-dependent transport systems inner membrane component Csal_1948 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 92113665 Common - gamma-glutamyl phosphate reductase Csal_1541 187 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 92112877 Common - protein of unknown function DUF6, transmembrane Csal_0748 80 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 92114815 Common - Carboxymethylenebutenolidase Csal_2697 108 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 92114435 Common - uroporphyrin-III C-methyltransferase Csal_2314 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 92114825 Common - transcriptional regulator, GntR family Csal_2707 133 COG1802 GntR, Transcriptional regulators Transcription 92112598 Common - Deoxyribodipyrimidine photolyase Csal_0465 132 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 92113884 Common - UDP-glucose 6-dehydrogenase Csal_1761 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 92114315 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase Csal_2193 221 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 92113364 Common - protein of unknown function DUF218 Csal_1238 38 COG2949 SanA, Uncharacterized membrane protein Function unknown 92115163 Nonpathogen - hypothetical protein Csal_3048 8 None None None 92113147 Common - periplasmic binding protein/LacI transcriptional regulator Csal_1019 27 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92114224 Common - Lipoprotein YaeC Csal_2102 101 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 92113030 Common - putative monovalent cation/H+ antiporter subunit C Csal_0902 93 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 92112389 Common lamB maltoporin Csal_0254 27 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 92114741 Common - major facilitator superfamily MFS_1 Csal_2623 11 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113574 Common - periplasmic sensor signal transduction histidine kinase Csal_1450 201 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92114340 Common - Mammalian cell entry related Csal_2218 108 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 92114514 Nonpathogen - hypothetical protein Csal_2396 1 None None None 92114201 Common - MoeA-like protein Csal_2079 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 92113625 Common - hypothetical protein Csal_1501 9 COG4519 COG4519, Uncharacterized protein conserved in bacteria Function unknown 92114465 Common - hypothetical protein Csal_2345 3 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 92113430 Common zntR zinc-responsive transcriptional regulator Csal_1304 148 COG0789 SoxR, Predicted transcriptional regulators Transcription 92112480 Common - 4-hydroxybenzoate 3-monooxygenase Csal_0347 69 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 92114325 Common - transport-associated Csal_2203 68 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 92112752 Common - Phosphopyruvate hydratase Csal_0619 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 92114146 Common - CheA signal transduction histidine kinases Csal_2024 151 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 92112581 Common - excinuclease ABC, A subunit Csal_0448 241 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 92114208 Common - periplasmic sensor signal transduction histidine kinase Csal_2086 179 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92112278 Common - hypothetical protein Csal_0143 219 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 92114016 Common - Smr protein/MutS2 Csal_1893 59 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 92114118 Common - hypothetical protein Csal_1996 12 None None None 92114960 Common - beta-lactamase-like protein Csal_2843 84 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 92114685 Nonpathogen - hypothetical protein Csal_2567 3 None None None 92112168 Common - glutathione-dependent formaldehyde-activating, GFA Csal_0032 39 COG3791 COG3791, Uncharacterized conserved protein Function unknown 92113118 Common - NADH:flavin oxidoreductase/NADH oxidase Csal_0990 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 92115156 Common - conserved hypothetical protein 730 Csal_3041 134 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 92112281 Nonpathogen - hypothetical protein Csal_0146 1 None None None 92115196 Common - ATP-dependent metalloprotease FtsH Csal_3081 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 92115150 Common - thioredoxin-related Csal_3035 228 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 92114921 Common - succinylarginine dihydrolase Csal_2804 34 COG3724 AstB, Succinylarginine dihydrolase Amino acid transport and metabolism 92113038 Common - Phosphoribulokinase Csal_0910 51 COG3954 PrkB, Phosphoribulokinase Energy production and conversion 92113484 Nonpathogen - hypothetical protein Csal_1358 4 None None None 92113667 Common - Iojap-related protein Csal_1543 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 92113925 Common rplT 50S ribosomal protein L20 Csal_1802 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 92112436 Common - Carboxymuconolactone decarboxylase Csal_0302 123 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114567 Common - isocitrate lyase Csal_2449 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 92114594 Common - mandelate racemase/muconate lactonizing enzyme Csal_2476 129 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92112327 Common - cobalamin synthesis protein, P47K Csal_0192 129 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 92113604 Common - cyclopropane fatty acyl phospholipid synthase Csal_1480 144 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 92114135 Nonpathogen - hypothetical protein Csal_2013 1 None None None 92112997 Common - multi-sensor hybrid histidine kinase Csal_0869 225 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92112571 Common rpsE 30S ribosomal protein S5 Csal_0438 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 92114261 Common - prolyl-tRNA synthetase Csal_2139 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92112576 Common rpsM 30S ribosomal protein S13 Csal_0443 215 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 92113974 Common - Biopolymer transport protein ExbD/TolR Csal_1851 142 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 92112331 Common - protein of unknown function DUF6, transmembrane Csal_0196 62 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 92114496 Common - hypothetical protein Csal_2378 9 None None None 92113460 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Csal_1334 119 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 92114570 Common - 3-isopropylmalate dehydratase, small subunit Csal_2452 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 92115265 Nonpathogen - hypothetical protein Csal_3150 1 None None None 92113312 Common - hypothetical protein Csal_1185 236 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 92113954 Nonpathogen - hypothetical protein Csal_1831 1 None None None 92115251 Common - ABC transporter related Csal_3136 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 92114040 Common - Formate dehydrogenase, gamma subunit Csal_1917 65 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 92114193 Common - DNA-directed DNA polymerase Csal_2071 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 92114767 Common - DNA-binding transcriptional regulator FruR Csal_2649 118 COG1609 PurR, Transcriptional regulators Transcription 92114680 Common - NmrA-like protein Csal_2562 8 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 92112559 Common - ribosomal protein L22 Csal_0426 218 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 92113647 Common - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 Csal_1523 193 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 92113774 Nonpathogen - hypothetical protein Csal_1650 1 None None None 92113416 Common - succinic semialdehyde dehydrogenase Csal_1290 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113516 Common - hypothetical protein Csal_1390 17 None None None 92112392 Common - porin, LamB type Csal_0257 25 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 92112966 Common - acyl-CoA thioesterase Csal_0838 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 92113541 Common - Dimethylaniline monooxygenase (N-oxide forming) Csal_1416 67 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 92114985 Common - methionyl-tRNA formyltransferase Csal_2868 214 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 92113326 Common - Succinylglutamate desuccinylase/aspartoacylase Csal_1199 52 COG3608 COG3608, Predicted deacylase General function prediction only 92113640 Common - transcriptional regulator BetI Csal_1516 60 COG1309 AcrR, Transcriptional regulator Transcription 92113715 Common - UDP-N-acetylenolpyruvoylglucosamine reductase Csal_1591 174 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 92113259 Common - response regulator receiver (CheY-like) and ANTAR domain protein Csal_1132 91 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 92113498 Common - phage late control D Csal_1372 36 COG3500 COG3500, Phage protein D General function prediction only 92114602 Common - TRAP-type mannitol/chloroaromatic compound transport system small permease component-like protein Csal_2484 26 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 92115255 Common - TRAP dicarboxylate transporter- DctP subunit Csal_3140 100 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92113818 Common - glycosyl transferase, group 1 Csal_1695 121 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92114039 Common - 4Fe-4S ferredoxin, iron-sulfur binding Csal_1916 176 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 92113250 Common - protein of unknown function DUF6, transmembrane Csal_1123 37 COG2962 RarD, Predicted permeases General function prediction only 92112161 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase Csal_0025 122 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 92113759 Common - multi-sensor hybrid histidine kinase Csal_1635 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92114612 Common - isochorismatase hydrolase Csal_2494 68 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 92115383 Common - Phosphate binding protein Csal_3268 103 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 92114846 Common - formate dehydrogenase, subunit FdhD Csal_2728 101 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 92114001 Common ectC L-ectoine synthase Csal_1878 35 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 92112395 Common - binding-protein-dependent transport systems inner membrane component Csal_0260 180 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 92114384 Common - hypothetical protein Csal_2263 46 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 92115001 Common - peptidase M24 Csal_2884 108 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 92114170 Common - Methylenetetrahydrofolate dehydrogenase (NADP+) Csal_2048 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 92113014 Common - Ribonuclease R Csal_0886 196 COG0557 VacB, Exoribonuclease R Transcription 92114760 Common - NUDIX hydrolase Csal_2642 129 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 92112797 Common - transcriptional regulator, LysR family Csal_0665 157 COG0583 LysR, Transcriptional regulator Transcription 92115401 Common - ATP synthase F1, alpha subunit Csal_3286 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 92113313 Common - Amidase, hydantoinase/carbamoylase Csal_1186 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 92112224 Common - Na+/solute symporter Csal_0089 174 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92114618 Common - Lysine exporter protein (LYSE/YGGA) Csal_2500 119 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92113074 Common - alpha/beta hydrolase Csal_0946 54 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92113212 Common - short-chain dehydrogenase/reductase SDR Csal_1084 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114619 Common - Exopolysaccharide synthesis, ExoD Csal_2501 10 COG3932 COG3932, Uncharacterized ABC-type transport system, permease components General function prediction only 92112174 Common - Lysine exporter protein (LYSE/YGGA) Csal_0038 115 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92114961 Common - Betaine-aldehyde dehydrogenase Csal_2844 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92115043 Common - Na+/solute symporter Csal_2927 53 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92114413 Nonpathogen - hypothetical protein Csal_2292 1 None None None 92113565 Common - HI0933-like protein Csal_1441 144 COG2081 COG2081, Predicted flavoproteins General function prediction only 92112911 Common - MscS Mechanosensitive ion channel Csal_0783 49 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 92113497 Nonpathogen - hypothetical protein Csal_1371 1 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 92113434 Common - hypothetical protein Csal_1308 47 None None None 92114301 Common - hypothetical protein Csal_2179 198 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 92113268 Common - fumarylacetoacetate hydrolase family protein Csal_1141 35 COG3970 COG3970, Fumarylacetoacetate (FAA) hydrolase family protein General function prediction only 92112454 Common - hypothetical protein Csal_0321 70 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 92114927 Common - putative phosphatidylethanolamine N-methyltransferase Csal_2810 78 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 92113122 Common - major facilitator superfamily MFS_1 Csal_0994 65 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113354 Common - Cof protein Csal_1228 105 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 92113950 Common - periplasmic sensor signal transduction histidine kinase Csal_1827 206 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92114214 Common - binding-protein-dependent transport systems inner membrane component Csal_2092 154 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 92113402 Common - tRNA delta(2)-isopentenylpyrophosphate transferase Csal_1276 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 92112376 Common - hypothetical protein Csal_0241 4 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92114858 Common - 6-phosphogluconolactonase Csal_2740 113 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 161897781 Common - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Csal_0457 82 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 92112552 Common - elongation factor Tu Csal_0419 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 92114837 Common - transcriptional regulator, AraC family Csal_2719 141 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92112540 Common - putative transcriptional acitvator, Baf Csal_0407 122 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 92115237 Common - proton-translocating NADH-quinone oxidoreductase, chain L Csal_3122 206 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 92113469 Common - ribosome modulation factor-related protein Csal_1343 21 COG3130 Rmf, Ribosome modulation factor Translation, ribosomal structure and biogenesis 92113985 Nonpathogen - hypothetical protein Csal_1862 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 92114173 Common - cysteinyl-tRNA synthetase Csal_2051 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92114397 Common - hypothetical protein Csal_2276 8 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92115405 Common - F0F1 ATP synthase subunit A Csal_3290 203 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 92113441 Common - diguanylate cyclase Csal_1315 179 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92114545 Common - Phosphoadenylyl-sulfate reductase (thioredoxin) Csal_2427 128 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 92113181 Common - IucA/IucC Csal_1053 59 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 92113642 Common ligB NAD-dependent DNA ligase LigB Csal_1518 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 92112304 Common - protein of unknown function DUF204 Csal_0169 67 COG1971 COG1971, Predicted membrane protein Function unknown 92112986 Common - peptidase M22, glycoprotease Csal_0858 193 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 92115390 Common - protein of unknown function DUF72 Csal_3275 95 COG1801 COG1801, Uncharacterized conserved protein Function unknown 92114743 Nonpathogen - hypothetical protein Csal_2625 1 None None None 92112776 Common - Mannitol dehydrogenase-like protein Csal_0643 89 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 92114420 Nonpathogen - hypothetical protein Csal_2299 1 None None None 92113649 Common - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Csal_1525 181 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 92112268 Common - short chain dehydrogenase Csal_0133 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114144 Common - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Csal_2022 161 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92115289 Common - protein of unknown function DUF849 Csal_3174 63 COG3246 COG3246, Uncharacterized conserved protein Function unknown 92113128 Common - sarcosine oxidase, alpha subunit family Csal_1000 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 92113105 Common - hypothetical protein Csal_0977 12 None None None 92113680 Common - pyruvate carboxylase subunit B Csal_1556 185 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 92113086 Common - protoheme IX farnesyltransferase Csal_0958 173 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 92114122 Common - cytochrome d ubiquinol oxidase, subunit II Csal_2000 151 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 92115233 Common - DSBA oxidoreductase Csal_3118 66 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 92114943 Common - NUDIX hydrolase Csal_2826 24 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 92112369 Common - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) Csal_0234 97 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 92112879 Common - transcriptional regulator, XRE family Csal_0750 41 None None None 92114978 Common - peptidase M48, Ste24p Csal_2861 131 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 92114251 Common - Glutaredoxin-related protein Csal_2129 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 92112504 Common - Phosphoglycerate kinase Csal_0371 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 92114471 Common codB cytosine permease Csal_2351 44 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 92114905 Common - protein of unknown function DUF583 Csal_2787 68 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 92114803 Common - glutathione S-transferase-like protein Csal_2685 35 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92112810 Common - Twin-arginine translocation pathway signal Csal_0678 84 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 92112823 Common - dihydrouridine synthase, DuS Csal_0691 206 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 92115088 Common - DNA repair protein RadC Csal_2972 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 92114856 Common - extracellular solute-binding protein, family 1 Csal_2738 92 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92114699 Common - thiamine-monophosphate kinase Csal_2581 193 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 92114878 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase Csal_2760 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92115139 Common sbcB exonuclease I Csal_3024 51 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 92115369 Common - PAS/PAC sensor signal transduction histidine kinase Csal_3254 218 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 92113827 Common - transcriptional regulator, LysR family Csal_1704 173 COG0583 LysR, Transcriptional regulator Transcription 92113334 Nonpathogen - hypothetical protein Csal_1208 1 None None None 92114100 Common - flagellar basal-body rod protein FlgC Csal_1977 126 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 92113049 Common apaG ApaG Csal_0921 88 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 92113276 Common - SMC protein-like protein Csal_1149 86 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 92114088 Common fliP flagellar biosynthesis protein FliP Csal_1965 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 92112291 Common - extracellular solute-binding protein, family 3 Csal_0156 162 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92114523 Common - acriflavin resistance protein Csal_2405 180 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 92112667 Common - extracellular solute-binding protein, family 3 Csal_0534 182 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92113015 Common - RNA methyltransferase TrmH, group 3 Csal_0887 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 92112352 Common - Glyoxalase I Csal_0217 117 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 92113745 Common - exodeoxyribonuclease III Csal_1621 196 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 92112350 Common - secretion protein HlyD Csal_0215 127 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 92113300 Common - bifunctional deaminase-reductase-like protein Csal_1173 207 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 92112802 Common - periplasmic sensor signal transduction histidine kinase Csal_0670 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92113236 Nonpathogen - hypothetical protein Csal_1109 1 COG4640 COG4640, Predicted membrane protein Function unknown 92113191 Common - two component, sigma54 specific, transcriptional regulator, Fis family Csal_1063 170 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92112642 Nonpathogen - hypothetical protein Csal_0509 1 COG3015 CutF, Uncharacterized lipoprotein NlpE involved in copper resistance Cell envelope biogenesis, outer membrane / Inorganic ion transport and metabolism 92114047 Common - DsrE-like protein Csal_1924 35 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 92114238 Common - protein of unknown function DUF1332 Csal_2116 26 COG4103 COG4103, Uncharacterized protein conserved in bacteria Function unknown 92114107 Common - hypothetical protein Csal_1984 6 None None None 92114278 Common - Competence protein ComEA helix-hairpin-helix region Csal_2156 108 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 92113850 Common - Senescence marker protein-30 (SMP-30) Csal_1727 86 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 92112723 Common - polyphosphate kinase Csal_0590 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 92114539 Common prpB 2-methylisocitrate lyase Csal_2421 136 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 92112785 Common - hypothetical protein Csal_0653 39 COG1238 COG1238, Predicted membrane protein Function unknown 92115055 Common - thioesterase superfamily Csal_2939 137 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 92114111 Common - methyl-accepting chemotaxis sensory transducer Csal_1989 165 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92114841 Common - threonine dehydratase Csal_2723 209 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 92112465 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0332 103 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92113167 Common - multidrug transporter membrane component/ATP-binding component Csal_1039 249 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 92113845 Common - UDP-glucose 4-epimerase Csal_1722 233 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 92113121 Common - electron transfer flavoprotein beta-subunit Csal_0993 13 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 92113271 Common - sugar (Glycoside-Pentoside-Hexuronide) transporter Csal_1144 87 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 92113021 Nonpathogen - hypothetical protein Csal_0893 1 None None None 92112444 Common - transcriptional regulator, LysR family Csal_0310 123 COG0583 LysR, Transcriptional regulator Transcription 92115415 Common - Cl- channel, voltage gated Csal_3300 159 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 92115337 Common - glutaredoxin Csal_3222 24 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 92114155 Common - flagellar hook-associated 2-like protein Csal_2033 90 COG1345 FliD, Flagellar capping protein Cell motility and secretion 92113723 Common - fatty acid/phospholipid synthesis protein PlsX Csal_1599 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 92114868 Common - hypothetical protein Csal_2750 27 COG4648 COG4648, Predicted membrane protein Function unknown 92113186 Nonpathogen - hypothetical protein Csal_1058 1 None None None 92115434 Nonpathogen - hypothetical protein Csal_3319 1 None None None 92113493 Common - hypothetical protein Csal_1367 12 None None None 92112422 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Csal_0288 17 COG0546 Gph, Predicted phosphatases General function prediction only 92113866 Common - transcriptional regulator, GntR family Csal_1743 118 COG1802 GntR, Transcriptional regulators Transcription 92115272 Common - aminotransferase, class I and II Csal_3157 227 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 92114358 Common - ribonuclease, Rne/Rng family Csal_2236 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 92114283 Common - RNA methyltransferase TrmH, group 1 Csal_2161 157 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 92112406 Common - transcriptional regulator, LacI family Csal_0272 128 COG1609 PurR, Transcriptional regulators Transcription 92112727 Common - phosphoribosyl-ATP pyrophosphohydrolase Csal_0594 179 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 92115344 Common - major facilitator superfamily MFS_1 Csal_3229 131 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92112203 Common - Transthyretin Csal_0068 63 COG2351 COG2351, Transthyretin-like protein General function prediction only 92113040 Common - putative ubiquinone biosynthesis protein Csal_0912 50 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 92113904 Common - transcriptional regulator, LysR family Csal_1781 153 COG0583 LysR, Transcriptional regulator Transcription 92114754 Common - Pseudouridylate synthase Csal_2636 80 COG0585 COG0585, Uncharacterized conserved protein Function unknown 92113383 Common - protein of unknown function UPF0057 Csal_1257 29 COG0401 COG0401, Uncharacterized homolog of Blt101 Function unknown 92112604 Nonpathogen - hypothetical protein Csal_0471 1 None None None 92114623 Common - hypothetical protein Csal_2505 3 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 92113487 Common - hypothetical protein Csal_1361 5 None None None 92112611 Common - ribosomal protein S20 Csal_0478 11 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 92114120 Common - ABC transporter related Csal_1998 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 92112298 Common - protein of unknown function DUF453 Csal_0163 56 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 92113220 Common - ATPase, E1-E2 type Csal_1093 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 92113929 Common - flavodoxin/nitric oxide synthase Csal_1806 29 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 92114190 Common - ErfK/YbiS/YcfS/YnhG Csal_2068 24 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 92113613 Nonpathogen - hypothetical protein Csal_1489 1 None None None 92113807 Common - TrkA-like protein Csal_1684 106 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 92114304 Nonpathogen - hypothetical protein Csal_2182 1 None None None 92112620 Nonpathogen - methylation Csal_0487 3 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 92113387 Common - tryptophan synthase subunit beta Csal_1261 226 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 92114883 Common - HAD-superfamily subfamily IB, PSPase-like protein Csal_2765 69 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 92113947 Common - Inositol-1(or 4)-monophosphatase Csal_1824 207 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 92112140 Common gyrB DNA gyrase subunit B Csal_0004 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 92114775 Common - phosphoenolpyruvate carboxykinase Csal_2657 97 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 92114646 Common - Thiosulfate sulfurtransferase Csal_2528 146 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 92113290 Common - dethiobiotin synthase Csal_1163 131 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 92112768 Common - binding-protein-dependent transport systems inner membrane component Csal_0635 143 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 92112649 Common - imidazole glycerol phosphate synthase subunit HisF Csal_0516 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 92113963 Common - Inosine/uridine-preferring nucleoside hydrolase Csal_1840 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 92115375 Common - Superoxide dismutase Csal_3260 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 92112872 Common - Pyridoxal-dependent decarboxylase Csal_0743 107 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 92112905 Common - glutamine synthetase Csal_0777 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 92113330 Nonpathogen - hypothetical protein Csal_1204 1 None None None 92112318 Common - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Csal_0183 104 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 92112658 Common - isocitrate dehydrogenase, NADP-dependent Csal_0525 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 92114405 Common - acetyl-CoA carboxylase, biotin carboxyl carrier protein Csal_2284 189 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 92112675 Common - Ectoine hydroxylase Csal_0542 37 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 92113869 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_1746 40 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92114937 Common - peptidase M48, Ste24p Csal_2820 128 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 92113450 Common - hypothetical protein Csal_1324 3 None None None 92112955 Common - Cytidine deaminase, homotetrameric Csal_0827 122 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 92114519 Common - HPP Csal_2401 71 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 92112887 Common - protein of unknown function DUF88 Csal_0758 67 COG1432 COG1432, Uncharacterized conserved protein Function unknown 92114983 Common - hypothetical protein Csal_2866 39 None None None 92113837 Common - polysaccharide biosynthesis protein Csal_1714 47 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 92114826 Common - D-amino-acid dehydrogenase Csal_2708 104 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92112192 Common - glutathione synthetase Csal_0057 123 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 92113176 Common - transcriptional regulator, RpiR family Csal_1048 25 COG1737 RpiR, Transcriptional regulators Transcription 92112819 Common - DoxX Csal_0687 29 COG2259 COG2259, Predicted membrane protein Function unknown 92115092 Common - TRAP dicarboxylate transporter, DctP subunit Csal_2976 108 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92114536 Common - two component transcriptional regulator, winged helix family Csal_2418 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92112189 Common - outer membrane efflux protein Csal_0054 52 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 92113876 Common - protein of unknown function DUF112, transmembrane Csal_1753 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92112306 Nonpathogen - hypothetical protein Csal_0171 1 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 92112199 Common - short-chain dehydrogenase/reductase SDR Csal_0064 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92115019 Common - Lysine exporter protein (LYSE/YGGA) Csal_2902 122 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92114185 Common - hypothetical protein Csal_2063 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 92115025 Nonpathogen - hypothetical protein Csal_2909 2 None None None 92113099 Common - dihydroneopterin aldolase Csal_0971 113 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 92113201 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_1073 57 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92113337 Common gltX glutamyl-tRNA synthetase Csal_1211 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 92115026 Common - transcriptional regulator, TetR family Csal_2910 63 COG1309 AcrR, Transcriptional regulator Transcription 92114886 Nonpathogen - hypothetical protein Csal_2768 1 None None None 92115394 Common - delta-aminolevulinic acid dehydratase Csal_3279 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 92112240 Common - alpha/beta hydrolase Csal_0105 161 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114627 Common - Drug resistance transporter Bcr/CflA subfamily Csal_2509 199 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92114028 Common - histone deacetylase superfamily Csal_1905 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 92112497 Common - L-fucose permease Csal_0364 46 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 92114975 Common - Small GTP-binding protein protein Csal_2858 229 COG1160 COG1160, Predicted GTPases General function prediction only 92112547 Common rpoB DNA-directed RNA polymerase subunit beta Csal_0414 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 92112784 Common - hypothetical protein Csal_0652 16 None None None 92115166 Common anmK anhydro-N-acetylmuramic acid kinase Csal_3051 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 92112774 Common - short chain dehydrogenase Csal_0641 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113908 Common - uracil-xanthine permease Csal_1785 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 92114021 Nonpathogen - hypothetical protein Csal_1898 1 COG3308 COG3308, Predicted membrane protein Function unknown 92112342 Common - hypothetical protein Csal_0207 5 None None None 92113898 Nonpathogen - hypothetical protein Csal_1775 1 None None None 92115209 Common - Chaperone DnaK Csal_3094 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 92112365 Common - CRISPR-associated protein, CT1976 Csal_0230 36 None None None 92114252 Common - ornithine carbamoyltransferase Csal_2130 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 92113800 Common - transcriptional regulator, XRE family Csal_1676 40 COG2944 COG2944, Predicted transcriptional regulator Transcription 92114026 Common - glycine betaine/L-proline transport ATP binding subunit Csal_1903 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 92114903 Common - Succinylglutamate desuccinylase/aspartoacylase Csal_2785 23 COG3608 COG3608, Predicted deacylase General function prediction only 92112636 Common - DNA-binding transcriptional regulator IlvY Csal_0503 186 COG0583 LysR, Transcriptional regulator Transcription 92114797 Common - transcriptional regulator, LysR family Csal_2679 167 COG0583 LysR, Transcriptional regulator Transcription 92115365 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csal_3250 201 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 92112588 Common - phospholipid/glycerol acyltransferase Csal_0455 189 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 92113112 Common - transcriptional regulator, LysR family Csal_0984 148 COG0583 LysR, Transcriptional regulator Transcription 92112166 Common - acetylornithine deacetylase Csal_0030 192 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 92113340 Common - succinate dehydrogenase (D subunit) Csal_1214 55 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 92114090 Common - flagellar biosynthetic protein FliR Csal_1967 127 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 92112314 Common - Peroxidase Csal_0179 226 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 92112738 Common - Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) Csal_0605 202 COG0281 SfcA, Malic enzyme Energy production and conversion 92113263 Common - transcriptional regulator, LysR family Csal_1136 174 COG0583 LysR, Transcriptional regulator Transcription 92115036 Common - short-chain dehydrogenase/reductase SDR Csal_2920 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92115217 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_3102 71 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92115094 Common - TRAP dicarboxylate transporter- DctM subunit Csal_2978 129 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92112691 Common - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative Csal_0558 38 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 92112473 Common - transcriptional regulator, IclR family Csal_0340 77 COG1414 IclR, Transcriptional regulator Transcription 92113453 Common - recombination factor protein RarA Csal_1327 241 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 92112950 Common - protein of unknown function DUF606 Csal_0822 50 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 92112349 Common - ABC transporter related Csal_0214 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 92114184 Common - phosphoenolpyruvate synthase Csal_2062 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 92114486 Nonpathogen - hypothetical protein Csal_2366 1 None None None 92112846 Nonpathogen - hypothetical protein Csal_0714 1 None None None 92115299 Common - ATP-dependent RNA helicase DbpA Csal_3184 229 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 92112187 Common - Type I secretion membrane fusion protein, HlyD Csal_0052 134 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 92115009 Common - Silent information regulator protein Sir2 Csal_2892 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 92115429 Common - iron permease FTR1 Csal_3314 95 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 92115247 Common - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Csal_3132 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 92112414 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0280 82 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92113995 Common - binding-protein-dependent transport systems inner membrane component Csal_1872 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 92112959 Common - deoxyribose-phosphate aldolase Csal_0831 131 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 92114525 Common - two component, sigma54 specific, transcriptional regulator, Fis family Csal_2407 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92114866 Common - hypothetical protein Csal_2748 31 None None None 92113151 Common - hypothetical protein Csal_1023 15 COG3802 GguC, Uncharacterized protein conserved in bacteria Function unknown 92114672 Common - metallophosphoesterase Csal_2554 74 COG1409 Icc, Predicted phosphohydrolases General function prediction only 92114863 Common - binding-protein-dependent transport systems inner membrane component Csal_2745 80 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 92114990 Common - K+ transporter Trk Csal_2873 121 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 92114473 Common - binding-protein-dependent transport systems inner membrane component Csal_2353 159 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 92112762 Common - hypothetical protein Csal_0629 11 COG3212 COG3212, Predicted membrane protein Function unknown 92112516 Common - aldo/keto reductase Csal_0383 205 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 92114449 Common - Ribulose-phosphate 3-epimerase Csal_2328 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 92112370 Common - glycoside hydrolase 15-related Csal_0235 70 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 92114197 Nonpathogen - hypothetical protein Csal_2075 1 None None None 92112469 Common - Rieske (2Fe-2S) protein Csal_0336 75 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 92114632 Common - Uncharacterized protein UPF0065 Csal_2514 76 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92112893 Common - nucleoside:H+ symporter Csal_0765 67 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 92113149 Common araH L-arabinose transporter permease protein Csal_1021 108 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 92114933 Common - dihydrodipicolinate synthase Csal_2816 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 92114722 Common - mannosyl-3-phosphoglycerate phosphatase Csal_2604 29 COG3769 COG3769, Predicted hydrolase (HAD superfamily) General function prediction only 92114679 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Csal_2561 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 92115304 Common - transferase hexapeptide repeat protein Csal_3189 216 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 92113703 Nonpathogen - hypothetical protein Csal_1579 3 None None None 92113054 Common - Carbohydrate kinase, thermoresistant glucokinase Csal_0926 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 92113283 Common - aldo/keto reductase Csal_1156 201 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 92115329 Common - TRAP dicarboxylate transporter- DctP subunit Csal_3214 100 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92115184 Common - acyltransferase 3 Csal_3069 102 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 92113347 Common - succinyl-CoA synthetase, alpha subunit Csal_1221 217 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 92113472 Common - erythronate-4-phosphate dehydrogenase Csal_1346 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 92112627 Common - Glycine oxidase ThiO Csal_0494 167 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92112863 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein Csal_0731 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 92114451 Common - major facilitator superfamily MFS_1 Csal_2330 31 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92115282 Common - peptidase M24 Csal_3167 130 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 92112901 Nonpathogen - hypothetical protein Csal_0773 5 COG4913 COG4913, Uncharacterized protein conserved in bacteria Function unknown 92112739 Common - protein of unknown function DUF481 Csal_0606 36 COG3137 COG3137, Putative salt-induced outer membrane protein Cell envelope biogenesis, outer membrane 92115147 Common - putative circadian clock protein, KaiC Csal_3032 54 COG0467 RAD55, RecA-superfamily ATPases implicated in signal transduction Signal transduction mechanisms 92112600 Common - cobalamin (vitamin B12) biosynthesis CbiX protein Csal_0467 60 COG2138 COG2138, Uncharacterized conserved protein Function unknown 92115158 Common - hypothetical protein Csal_3043 9 None None None 92114654 Common - hypothetical protein Csal_2536 5 None None None 92112787 Common - hypothetical protein Csal_0655 3 None None None 92114246 Common - hypothetical protein Csal_2124 4 None None None 92113555 Common - transcriptional regulators, TraR/DksA family Csal_1430 32 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 92113130 Common - formyltetrahydrofolate deformylase Csal_1002 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 92115123 Common - single-stranded-DNA-specific exonuclease RecJ Csal_3008 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 92112340 Common - hypothetical protein Csal_0205 3 None None None 92113911 Common - Xanthine dehydrogenase Csal_1788 107 COG4631 XdhB, Xanthine dehydrogenase, molybdopterin-binding subunit B Nucleotide transport and metabolism 92112645 Common - tRNA 2-selenouridine synthase Csal_0512 65 COG2603 COG2603, Predicted ATPase General function prediction only 92113248 Common - peptidase U34, dipeptidase Csal_1121 27 COG4690 PepD, Dipeptidase Amino acid transport and metabolism 92112684 Common - binding-protein-dependent transport systems inner membrane component Csal_0551 131 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 92114739 Common - Mg2+ transporter protein, CorA-like protein Csal_2621 116 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 92115311 Common - Uncharacterized protein UPF0065 Csal_3196 71 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92115317 Common - RNA methyltransferase TrmH, group 2 Csal_3202 161 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 92112616 Common - peptidylprolyl isomerase, FKBP-type Csal_0483 133 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 92114620 Common - TM2 Csal_2502 23 COG2314 XynA, Predicted membrane protein Function unknown 92112403 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0269 132 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92113145 Common - D-galactose 1-dehydrogenase Csal_1017 103 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 92113523 Common - phage major capsid protein, P2 Csal_1397 22 None None None 92114494 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Csal_2376 27 COG4070 COG4070, Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family Posttranslational modification, protein turnover, chaperones 92112517 Common - transketolase Csal_0384 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 92113366 Common - S6 modification enzyme RimK Csal_1240 158 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 92114774 Common - Twin-arginine translocation pathway signal Csal_2656 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 92112438 Nonpathogen - TRAP-T family transporter, small inner membrane subunit Csal_0304 3 None None None 92112883 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0754 96 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92112523 Common - AzlC-like protein Csal_0390 100 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 92114018 Common - ribonuclease BN, putative Csal_1895 95 COG1295 Rbn, Predicted membrane protein Function unknown 92113623 Common - sodium/calcium exchanger membrane region Csal_1499 99 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 92113501 Common - Phage tail tape measure protein TP901, core region Csal_1375 54 COG5283 COG5283, Phage-related tail protein Function unknown 92113633 Common - rare lipoprotein A Csal_1509 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 92114988 Common - protein of unknown function DUF1458 Csal_2871 40 COG3360 COG3360, Uncharacterized conserved protein Function unknown 92115165 Common - tyrosyl-tRNA synthetase Csal_3050 243 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92113650 Common lolB outer membrane lipoprotein LolB Csal_1526 53 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 92112425 Common - Uncharacterized protein UPF0065 Csal_0291 70 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92112583 Common - single-strand binding protein Csal_0450 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 92114066 Common - Methyltransferase type 11 Csal_1943 31 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 92114596 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_2478 52 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92114687 Common - porin, Gram-negative type Csal_2569 39 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 92113319 Common - Glutamate--ammonia ligase Csal_1192 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 92115108 Common - ribosomal-protein-alanine acetyltransferase Csal_2992 96 COG0456 RimI, Acetyltransferases General function prediction only 92112482 Common - Alcohol dehydrogenase, zinc-binding Csal_0349 171 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 92114565 Common - Cupin 4 Csal_2447 59 COG2850 COG2850, Uncharacterized conserved protein Function unknown 92113669 Common - Peptidoglycan glycosyltransferase Csal_1545 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 92113508 Nonpathogen - hypothetical protein Csal_1382 1 None None None 92114323 Common - protein of unknown function UPF0102 Csal_2201 148 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 92114923 Common - Arginine N-succinyltransferase Csal_2806 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 92113606 Common - glyceraldehyde-3-phosphate dehydrogenase, type I Csal_1482 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 92113036 Common - Polyhydroxyalkanoate synthesis repressor PhaR Csal_0908 64 COG5394 COG5394, Uncharacterized protein conserved in bacteria Function unknown 92114339 Common - toluene tolerance Csal_2217 68 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 92113976 Common tolB translocation protein TolB Csal_1853 164 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 92113941 Common - peptidase M23B Csal_1818 140 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 92112178 Common - Lysine exporter protein (LYSE/YGGA) Csal_0042 55 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92115411 Common - ABC transporter related Csal_3296 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 92112150 Common - sulfatase Csal_0014 55 COG3083 COG3083, Predicted hydrolase of alkaline phosphatase superfamily General function prediction only 92114378 Common - ImpA-like protein Csal_2257 31 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 92113923 Common - translation initiation factor IF-3 Csal_1800 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 92114133 Common - sigma 28 (Flagella/Sporulation) Csal_2011 214 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 92115263 Common - amino acid carrier protein Csal_3148 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 92112908 Common - FAD dependent oxidoreductase Csal_0780 107 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92113322 Common - binding-protein-dependent transport systems inner membrane component Csal_1195 133 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 92112271 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csal_0136 206 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 92113945 Common - hypothetical protein Csal_1822 6 None None None 92114131 Common - protein of unknown function DUF330 Csal_2009 28 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 92114572 Common - transcriptional regulator, LysR family Csal_2454 192 COG0583 LysR, Transcriptional regulator Transcription 92113419 Common - NLP/P60 Csal_1293 146 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 92113310 Common - Porphyromonas-type peptidyl-arginine deiminase Csal_1183 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 92112573 Common - ribosomal protein L15 Csal_0440 213 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 92112999 Common - Na+/solute symporter Csal_0871 169 COG4147 DhlC, Predicted symporter General function prediction only 92113572 Common - hemolysin A Csal_1448 132 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 92114543 Common - transport system permease protein Csal_2425 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92113886 Common - transcriptional regulator, LysR family Csal_1763 191 COG0583 LysR, Transcriptional regulator Transcription 92113571 Common - MscS Mechanosensitive ion channel Csal_1447 189 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 92114166 Common - ATP-dependent protease La Csal_2044 229 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 92115225 Common - argininosuccinate lyase Csal_3110 234 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 92113725 Common - 3-oxoacyl-(acyl-carrier-protein) reductase Csal_1601 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113358 Common - transcriptional regulator, BadM/Rrf2 family Csal_1232 40 COG1959 COG1959, Predicted transcriptional regulator Transcription 92113351 Common - exoribonuclease II Csal_1225 192 COG4776 Rnb, Exoribonuclease II Transcription 92114431 Common - ABC transporter related Csal_2310 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 92113592 Common - acyl-CoA synthetase Csal_1468 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92112323 Common - periplasmic solute binding protein Csal_0188 142 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 92114097 Common - Flagellar basal-body rod FlgF Csal_1974 122 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 92114734 Common - GntR-like protein Csal_2616 116 COG2186 FadR, Transcriptional regulators Transcription 92113082 Common - ubiquinol oxidase, subunit II Csal_0954 144 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 92112929 Nonpathogen - hypothetical protein Csal_0801 1 None None None 92113298 Common - Creatininase Csal_1171 88 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 92113586 Common - protein of unknown function DUF709 Csal_1462 34 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 92114037 Nonpathogen - Twin-arginine translocation pathway signal Csal_1914 1 None None None 92114506 Common - Endoribonuclease L-PSP Csal_2388 140 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 92115287 Common - hypothetical protein Csal_3172 30 COG0824 FcbC, Predicted thioesterase General function prediction only 92115331 Common - transcriptional regulator, LacI family Csal_3216 126 COG1609 PurR, Transcriptional regulators Transcription 92112380 Common - signal transduction histidine kinase, nitrogen specific, NtrB Csal_0245 218 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 92114326 Common - Stringent starvation protein B Csal_2204 66 COG2969 SspB, Stringent starvation protein B General function prediction only 92114011 Common - HesB/YadR/YfhF Csal_1888 64 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 92114911 Common - putative ammonia monooxygenase Csal_2794 40 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 92114579 Common - hypothetical protein Csal_2461 118 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 92113931 Common - NADH:flavin oxidoreductase/NADH oxidase Csal_1808 177 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 92113811 Nonpathogen - hypothetical protein Csal_1688 2 None None None 92115221 Common - HemY-like protein Csal_3106 50 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 92114877 Common - hypothetical protein Csal_2759 14 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 92114437 Common - FAD linked oxidase-like protein Csal_2316 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 92112462 Common - hypothetical protein Csal_0329 40 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 92112916 Common - hypothetical protein Csal_0788 4 None None None 92113687 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Csal_1563 57 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 92113329 Nonpathogen - hypothetical protein Csal_1203 1 None None None 92113787 Nonpathogen - hypothetical protein Csal_1663 1 None None None 92112975 Common - coenzyme PQQ synthesis D Csal_0847 18 None None None 92113422 Common - CDP-alcohol phosphatidyltransferase Csal_1296 29 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 92114423 Common - urease accessory protein UreG Csal_2302 132 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 92112597 Common - hypothetical protein Csal_0464 29 None None None 92113796 Common - 3'(2'),5'-bisphosphate nucleotidase Csal_1672 164 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 92115069 Common - Ferritin and Dps Csal_2953 134 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 92114690 Common - Thymidylate synthase Csal_2572 143 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 92115176 Common - glutamyl-tRNA synthetase, class Ic Csal_3061 247 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 92114347 Common - ABC transporter related Csal_2225 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 92112295 Nonpathogen - protein of unknown function DUF81 Csal_0160 3 COG0730 COG0730, Predicted permeases General function prediction only 92114588 Common - alpha/beta hydrolase Csal_2470 50 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114817 Common - periplasmic binding protein Csal_2699 55 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 92115202 Common - Dihydrodipicolinate reductase Csal_3087 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 92114718 Common - extracellular solute-binding protein, family 3 Csal_2600 184 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92115198 Common - protein of unknown function UPF0044 Csal_3083 97 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 92114769 Common - hypothetical protein Csal_2651 22 None None None 92113778 Common - hypothetical protein Csal_1654 7 None None None 92113064 Common - phosphogluconate dehydratase Csal_0936 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 92113371 Nonpathogen - hypothetical protein Csal_1245 1 None None None 92113273 Common - GntR-like protein Csal_1146 112 COG2186 FadR, Transcriptional regulators Transcription 92113959 Common - transcriptional regulator, LysR family Csal_1836 171 COG0583 LysR, Transcriptional regulator Transcription 92113737 Common - electron transfer flavoprotein beta-subunit Csal_1613 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 92113124 Common - NADH dehydrogenase (quinone) Csal_0996 163 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 92112316 Common - ABC transporter related Csal_0181 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 92112550 Common - 30S ribosomal protein S7 Csal_0417 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 92113080 Nonpathogen - hypothetical protein Csal_0952 2 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 92112156 Common - threonine dehydratase, biosynthetic Csal_0020 215 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 92113952 Common - TatD-related deoxyribonuclease Csal_1829 235 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 92114371 Common - hypothetical protein Csal_2249 5 None None None 92114175 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin type Csal_2053 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 92112935 Common - nucleoid-associated protein NdpA Csal_0807 31 COG3081 COG3081, Nucleoid-associated protein General function prediction only 92115131 Common - ribosomal protein S16 Csal_3016 208 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 92114885 Common - protein of unknown function DUF107 Csal_2767 74 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 92113400 Common - N-acetylmuramoyl-L-alanine amidase Csal_1274 178 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 92114425 Common - UreE urease accessory-like protein Csal_2304 61 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 92112644 Common - selenide, water dikinase Csal_0511 149 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 92114559 Common - ATP-dependent Clp protease adaptor protein ClpS Csal_2441 123 COG2127 COG2127, Uncharacterized conserved protein Function unknown 92114142 Common - response regulator receiver (CheY-like) modulated CheB methylesterase Csal_2020 210 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 92114268 Common - DNA topoisomerase III Csal_2146 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 92114517 Common - TatD-related deoxyribonuclease Csal_2399 230 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 92112851 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0719 136 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92112446 Common - Protocatechuate 3,4-dioxygenase, alpha subunit Csal_0312 39 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 92115231 Common - HAD-superfamily hydrolase subfamily IA, variant 3 Csal_3116 77 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 92113444 Common - D-amino acid dehydrogenase small subunit Csal_1318 134 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92113336 Common - transcriptional regulator, LysR family Csal_1210 152 COG0583 LysR, Transcriptional regulator Transcription 92114940 Common - short-chain alcohol dehydrogenase Csal_2823 26 COG3007 COG3007, Uncharacterized paraquat-inducible protein B Function unknown 92114875 Nonpathogen - hypothetical protein Csal_2757 1 None None None 92114235 Common - phosphoribosylglycinamide formyltransferase Csal_2113 219 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 92112984 Common - Dihydrolipoamide acetyltransferase Csal_0856 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 92114124 Nonpathogen - hypothetical protein Csal_2002 1 None None None 92114707 Common - crcB protein Csal_2589 134 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 92112778 Common - transaldolase B Csal_0645 184 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 92114853 Common - ABC transporter related Csal_2735 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92112825 Common - pyruvate carboxylase subunit B Csal_0693 199 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 92115099 Common - Phosphomannomutase Csal_2983 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 92113867 Common - FAD linked oxidase-like protein Csal_1744 182 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 92115240 Common - NADH dehydrogenase subunit I Csal_3125 191 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 92113781 Common - Flp pilus assembly CpaB Csal_1657 20 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 92113103 Common - DNA primase Csal_0975 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 92112528 Common - cation diffusion facilitator family transporter Csal_0395 217 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 92115235 Common - Proton-translocating NADH-quinone oxidoreductase, chain N Csal_3120 203 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 92113635 Common - acriflavin resistance protein Csal_1511 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 92112885 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0756 125 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92114941 Common - hypothetical protein Csal_2824 2 None None None 92114745 Nonpathogen - protein of unknown function DUF1328 Csal_2627 1 None None None 92113965 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Csal_1842 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 92115385 Common - hypothetical protein Csal_3270 27 COG3431 COG3431, Predicted membrane protein Function unknown 92112861 Common - extracellular solute-binding protein, family 1 Csal_0729 25 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 92114294 Nonpathogen - hypothetical protein Csal_2172 4 None None None 92112417 Common - hypothetical protein Csal_0283 18 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92112634 Common - acetolactate synthase, large subunit, biosynthetic type Csal_0501 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 92115045 Common - diacylglycerol kinase Csal_2929 117 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 92113817 Common - O-antigen polymerase Csal_1694 6 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 92113621 Common - hypothetical protein Csal_1497 11 None None None 92114003 Common - hypothetical protein Csal_1880 18 COG0730 COG0730, Predicted permeases General function prediction only 92112755 Common - CinA-like protein Csal_0622 193 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 92114604 Common - mandelate racemase/muconate lactonizing enzyme Csal_2486 111 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92113462 Common - putative prophage repressor Csal_1336 67 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 92112549 Common rpsL 30S ribosomal protein S12 Csal_0416 238 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 92112968 Common - Lytic transglycosylase Csal_0840 110 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 92113257 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Csal_1130 83 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 92114411 Common - hypothetical protein Csal_2290 6 COG3205 COG3205, Predicted membrane protein Function unknown 92112397 Common - ABC transporter related Csal_0262 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92113012 Common - putative transcriptional regulator, AsnC family Csal_0884 31 COG1522 Lrp, Transcriptional regulators Transcription 92114777 Common - RNA-binding S4 Csal_2659 103 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 92113543 Common - Extracellular ligand-binding receptor Csal_1418 150 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 92115172 Common metX homoserine O-acetyltransferase Csal_3057 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 92113753 Common - GTP-binding protein LepA Csal_1629 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 92113628 Common - OmpA/MotB Csal_1504 158 COG1360 MotB, Flagellar motor protein Cell motility and secretion 92114963 Common - RNA methyltransferase TrmH, group 1 Csal_2846 156 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 92113533 Common - hypothetical protein Csal_1407 8 None None None 92115253 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_3138 36 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92113320 Common - extracellular solute-binding protein, family 1 Csal_1193 134 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 92114172 Common - Adenosylhomocysteine nucleosidase Csal_2050 82 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 92112521 Common - TRAP transporter, 4TM/12TM fusion protein Csal_0388 124 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 92112226 Common - N-acyl-D-amino-acid deacylase Csal_0091 69 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 92114382 Common - hypothetical protein Csal_2261 8 COG3913 SciT, Uncharacterized protein conserved in bacteria Function unknown 92113983 Common - UDP-glucose/GDP-mannose dehydrogenase Csal_1860 194 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 92115403 Common - F0F1 ATP synthase subunit B Csal_3288 138 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 92113562 Common - aldo/keto reductase Csal_1438 186 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 92115261 Common thiG thiazole synthase Csal_3146 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 92112836 Common - protein of unknown function DUF752 Csal_0704 100 COG4121 COG4121, Uncharacterized conserved protein Function unknown 92113717 Common - Pseudouridine synthase, RluD Csal_1593 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 92115270 Common - alpha/beta hydrolase Csal_3155 37 COG2267 PldB, Lysophospholipase Lipid metabolism 92114785 Common - multi-sensor hybrid histidine kinase Csal_2667 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92114854 Common - binding-protein-dependent transport systems inner membrane component Csal_2736 149 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 92115430 Common trmE tRNA modification GTPase TrmE Csal_3315 221 COG0486 ThdF, Predicted GTPase General function prediction only 92115257 Nonpathogen - hypothetical protein Csal_3142 3 None None None 92114762 Common - acyl-CoA dehydrogenase-like protein Csal_2644 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 92114643 Common - GCN5-related N-acetyltransferase Csal_2525 122 COG0456 RimI, Acetyltransferases General function prediction only 92112172 Common - GCN5-related N-acetyltransferase Csal_0036 36 COG0456 RimI, Acetyltransferases General function prediction only 92112325 Common - ABC-3 Csal_0190 94 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 92113432 Nonpathogen - hypothetical protein Csal_1306 1 None None None 92114456 Common - PhoH-like protein Csal_2335 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 92114499 Common - peptidase M24 Csal_2381 144 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 92114621 Common - cold-shock DNA-binding domain protein Csal_2503 182 COG1278 CspC, Cold shock proteins Transcription 92113864 Common - Chromate transporter Csal_1741 9 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 92113222 Common - sodium/hydrogen exchanger Csal_1095 180 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 92113381 Common - Glutaredoxin-like region Csal_1255 116 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 92112677 Common - arginine decarboxylase Csal_0544 76 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 92113495 Common - DNA-directed DNA polymerase Csal_1369 160 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 92113927 Common pheT phenylalanyl-tRNA synthetase subunit beta Csal_1804 233 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 92115346 Common - dihydroorotase Csal_3231 86 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 92112205 Common - HpcH/HpaI aldolase Csal_0070 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 92113100 Common - protein of unknown function DUF205 Csal_0972 126 COG0344 COG0344, Predicted membrane protein Function unknown 92113356 Common - conserved hypothetical protein 1620 Csal_1230 32 COG3768 COG3768, Predicted membrane protein Function unknown 92112198 Common - aspartate carbamoyltransferase Csal_0063 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 92112970 Common - Antibiotic biosynthesis monooxygenase Csal_0842 16 COG1359 COG1359, Uncharacterized conserved protein Function unknown 92112542 Common nusG transcription antitermination protein NusG Csal_0409 215 COG0250 NusG, Transcription antiterminator Transcription 92115378 Common - diguanylate phosphodiesterase with GAF sensor Csal_3263 171 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 92112338 Common - major facilitator superfamily MFS_1 Csal_0203 62 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92112659 Nonpathogen - hypothetical protein Csal_0526 1 None None None 92112479 Common - transcriptional regulator, AraC family Csal_0346 95 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92115078 Common - aconitate hydratase 1 Csal_2962 222 COG1048 AcnA, Aconitase A Energy production and conversion 92113805 Nonpathogen - hypothetical protein Csal_1682 1 None None None 92113608 Common - protein tyrosine phosphatase Csal_1484 103 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 92114667 Common - ABC transporter related Csal_2549 225 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 92112716 Nonpathogen - hypothetical protein Csal_0583 1 None None None 92113611 Common - Arsenical pump membrane protein Csal_1487 106 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 92115407 Common - parB-like partition proteins Csal_3292 184 COG1475 Spo0J, Predicted transcriptional regulators Transcription 92113178 Common - periplasmic binding protein Csal_1050 50 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 92114403 Common - hypothetical protein Csal_2282 21 COG5345 COG5345, Uncharacterized protein conserved in bacteria Function unknown 92113061 Common - aldo/keto reductase Csal_0933 149 COG4989 COG4989, Predicted oxidoreductase General function prediction only 92112772 Common - PfkB Csal_0639 132 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 92112602 Common - ATP-dependent helicase HepA Csal_0469 112 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 92114395 Common - Rhs element Vgr protein Csal_2274 57 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 92114939 Common - hypothetical protein Csal_2822 14 None None None 92112903 Common - Prevent-host-death protein Csal_0775 17 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 92113835 Common - polysaccharide export protein Csal_1712 123 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 92112618 Common - methylation Csal_0485 10 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 92112874 Common - Cupin 2 protein Csal_0745 10 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 92112734 Common - Sporulation related Csal_0601 15 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 92112457 Common - Protocatechuate 4,5-dioxygenase Csal_0324 33 COG3384 COG3384, Uncharacterized conserved protein Function unknown 92112660 Common - Twin-arginine translocation pathway signal Csal_0527 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 92114848 Common - transcriptional regulator, AsnC family Csal_2730 144 COG1522 Lrp, Transcriptional regulators Transcription 92115013 Common - protein of unknown function DUF1653 Csal_2896 36 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 92112977 Common - chromosome segregation and condensation protein ScpA Csal_0849 141 COG1354 COG1354, Uncharacterized conserved protein Function unknown 92114828 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_2710 189 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92114955 Common - agmatinase, putative Csal_2838 156 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 92112404 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_0270 10 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92112779 Common - Succinate-semialdehyde dehydrogenase (NAD(P)+) Csal_0646 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92112889 Common - transcriptional regulator, LysR family Csal_0760 129 COG0583 LysR, Transcriptional regulator Transcription 92113878 Common - Uncharacterized protein UPF0065 Csal_1755 75 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92113292 Common - alpha/beta hydrolase Csal_1165 26 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92113671 Common - Lytic murein transglycosylase B Csal_1547 103 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 92113211 Common - hypothetical protein Csal_1083 19 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 92115279 Common - Ankyrin Csal_3164 105 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 92115086 Common - ribosomal protein L33 Csal_2970 142 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 92114973 Common - hypothetical protein Csal_2856 63 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 92113768 Common - hypothetical protein Csal_1644 12 None None None 92115137 Common - protein of unknown function DUF159 Csal_3022 96 COG2135 COG2135, Uncharacterized conserved protein Function unknown 92113243 Common - Nitrite reductase (NAD(P)H) large subunit, NirD Csal_1116 45 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 92112766 Common - extracellular solute-binding protein, family 1 Csal_0633 109 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92112284 Common - hypothetical protein Csal_0149 44 None None None 92112211 Common - permease for cytosine/purines, uracil, thiamine, allantoin Csal_0076 72 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 92112812 Common - aldehyde dehydrogenase Csal_0680 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92112652 Common - Imidazoleglycerol-phosphate dehydratase Csal_0519 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 92114356 Common - peptidase U62, modulator of DNA gyrase Csal_2234 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 92113711 Common lpxK tetraacyldisaccharide 4'-kinase Csal_1587 129 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 92113047 Common - 4-hydroxythreonine-4-phosphate dehydrogenase Csal_0919 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 92113265 Common - protein of unknown function DUF188 Csal_1138 90 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 92113198 Common - PilT protein-like protein Csal_1070 57 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 92114531 Common - ABC transporter related Csal_2413 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92114586 Common - Smr protein/MutS2 Csal_2468 94 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 92113747 Common - DEAD/DEAH box helicase-like protein Csal_1623 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 92113193 Common - hypothetical protein Csal_1065 2 None None None 92115059 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2943 82 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 92113841 Common - acyltransferase family protein Csal_1718 9 COG3594 NolL, Fucose 4-O-acetylase and related acetyltransferases Carbohydrate transport and metabolism 92114045 Common - DsrC-like protein Csal_1922 60 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 92113076 Common - secretion protein HlyD Csal_0948 163 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 92115118 Common - Ectoine hydroxylase Csal_3003 37 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 92113302 Nonpathogen - hypothetical protein Csal_1175 7 None None None 92113598 Common - methyl-accepting chemotaxis sensory transducer Csal_1474 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92114521 Common - MATE efflux family protein Csal_2403 177 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 161897780 Common - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Csal_2058 207 COG1049 AcnB, Aconitase B Energy production and conversion 92114408 Common - Dihydrouridine synthase TIM-barrel protein nifR3 Csal_2287 207 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 92114821 Common - hypothetical protein Csal_2703 83 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 92114659 Common - metal dependent phosphohydrolase Csal_2541 86 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 92113238 Common - peptidase S15 Csal_1111 68 COG2936 COG2936, Predicted acyl esterases General function prediction only 92112470 Common - ferredoxin Csal_0337 77 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 92113165 Common - CsbD-like protein Csal_1037 54 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 92113843 Common - polysaccharide deacetylase Csal_1720 7 None None None 92114818 Common - transport system permease protein Csal_2700 186 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92113188 Common - two component transcriptional regulator, winged helix family Csal_1060 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92113278 Common - Deoxyribonuclease V Csal_1151 74 COG1515 Nfi, Deoxyinosine 3'endonuclease (endonuclease V) DNA replication, recombination, and repair 92113788 Common - membrane protein-like protein Csal_1664 8 COG4655 COG4655, Predicted membrane protein Function unknown 92113544 Common - inner-membrane translocator Csal_1419 161 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 92114811 Common - glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase Csal_2693 236 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 92114276 Common - hypothetical protein Csal_2154 60 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 92112804 Common - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Csal_0672 138 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 92115290 Common - gluconate transporter Csal_3175 80 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 92114366 Common - hypothetical protein Csal_2244 7 None None None 92112383 Common - Phosphonate ABC transporter PhnC, ATP-binding Csal_0248 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 92113214 Common - Arginase/agmatinase/formiminoglutamase Csal_1087 58 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 92113618 Common - Cobyrinic acid a,c-diamide synthase Csal_1494 220 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 92114759 Common - NUDIX hydrolase Csal_2641 42 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 92114987 Common - Nicotinamidase Csal_2870 105 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 92113183 Common - Pyridoxal-dependent decarboxylase Csal_1055 123 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 92114478 Common - MmgE/PrpD Csal_2358 53 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 92114281 Common - chaperonin Cpn10 Csal_2159 211 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 92112311 Common - methyl-accepting chemotaxis sensory transducer Csal_0176 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92112354 Common - ABC-type glycine betaine transport system protein Csal_0219 69 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92112182 Common - phosphoglyceromutase Csal_0046 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 92114113 Nonpathogen - hypothetical protein Csal_1991 1 None None None 92113491 Common - putative phage repressor Csal_1365 51 COG2932 COG2932, Predicted transcriptional regulator Transcription 92113825 Common - hypothetical protein Csal_1702 29 COG5464 COG5464, Uncharacterized conserved protein Function unknown 92112725 Common - twin-arginine translocation protein TatB Csal_0592 96 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 92113932 Common - conserved hypothetical protein 730 Csal_1809 38 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 92114952 Common secD preprotein translocase subunit SecD Csal_2835 210 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 92114005 Common - ferric uptake regulator, FUR family Csal_1882 151 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 92114696 Common - HAD-superfamily subfamily IB, PSPase-like protein Csal_2578 71 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 92112859 Common - two component transcriptional regulator, winged helix family Csal_0727 204 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92113840 Nonpathogen - hypothetical protein Csal_1717 1 None None None 92113727 Common - beta-ketoacyl synthase Csal_1603 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92114363 Common - glutamyl-tRNA(Gln) amidotransferase, C subunit Csal_2241 144 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 92114582 Common - hypothetical protein Csal_2464 9 None None None 92112607 Common - ribosomal protein L21 Csal_0474 214 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 92114274 Common - integration host factor, beta subunit Csal_2152 204 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 92112375 Common - polysaccharide deacetylase Csal_0240 24 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 92115313 Common - protein of unknown function DUF112, transmembrane Csal_3198 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92112807 Common - N-formylglutamate amidohydrolase Csal_0675 40 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 92113233 Common - TrkA-like protein Csal_1106 148 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 92114541 Common - alpha/beta hydrolase Csal_2423 67 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92112176 Common - major facilitator superfamily MFS_1 Csal_0040 19 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92115333 Common - major facilitator superfamily MFS_1 Csal_3218 77 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 92114908 Common - ThiJ/PfpI Csal_2791 106 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92114098 Common - flagellar basal body FlaE Csal_1975 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 92114129 Common - hypothetical protein Csal_2007 54 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 92112441 Common - transcriptional regulator, LysR family Csal_0307 131 COG0583 LysR, Transcriptional regulator Transcription 92114935 Common - protein of unknown function UPF0118 Csal_2818 150 COG0628 PerM, Predicted permease General function prediction only 92114806 Common glcE glycolate oxidase FAD binding subunit Csal_2688 160 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 92113359 Common - cysteine desulfurase activator complex subunit SufB Csal_1233 184 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 92113209 Common - AAA ATPase, central region Csal_1081 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 92112145 Common - Lipopolysaccharide heptosyltransferase II Csal_0009 113 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 92114355 Common - protein of unknown function DUF615 Csal_2233 61 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 92114377 Nonpathogen - hypothetical protein Csal_2256 1 None None None 92113185 Common - 4'-phosphopantetheinyl transferase Csal_1057 35 COG2977 EntD, Phosphopantetheinyl transferase component of siderophore synthetase Secondary metabolites biosynthesis, transport, and catabolism 92113272 Common - dihydroxy-acid dehydratase Csal_1145 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 92112748 Common gltB glutamate synthase subunit alpha Csal_0615 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 92115067 Nonpathogen - hypothetical protein Csal_2951 1 None None None 92113763 Common - MazG family protein Csal_1639 156 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 92113352 Common - NAD-dependent epimerase/dehydratase Csal_1226 52 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92113547 Common - ABC transporter related Csal_1422 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 92112973 Common - pyrroloquinoline quinone biosynthesis protein PqqB Csal_0845 35 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 92113779 Common - hypothetical protein Csal_1655 30 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 92115308 Common - GntR-like protein Csal_3193 127 COG2186 FadR, Transcriptional regulators Transcription 92114091 Common flgL flagellar hook-associated protein FlgL Csal_1968 82 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 92112263 Common - Oxidoreductase FAD-binding protein Csal_0128 123 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 92113349 Common - hypothetical protein Csal_1223 6 COG3233 COG3233, Predicted deacetylase General function prediction only 92114297 Common - type II secretion system protein Csal_2175 147 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 92113043 Common - Nucleotidyl transferase Csal_0915 226 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 92112260 Common - hypothetical protein Csal_0125 19 COG5622 COG5622, Protein required for attachment to host cells Cell motility and secretion 92112647 Common - methylated-DNA-(protein)-cysteine S-methyltransferase Csal_0514 62 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 92112294 Common - catalase/peroxidase HPI Csal_0159 98 COG0376 KatG, Catalase (peroxidase I) Inorganic ion transport and metabolism 92113303 Common - glycosyl transferase, group 1 Csal_1176 161 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92114053 Common - potassium/proton antiporter Csal_1930 139 COG3263 COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain Inorganic ion transport and metabolism 92113638 Common - choline dehydrogenase Csal_1514 88 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 92113773 Nonpathogen - hypothetical protein Csal_1649 1 None None None 92115114 Common - extracellular solute-binding protein, family 5 Csal_2999 213 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 92114081 Common - ATPase FliI/YscN Csal_1958 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 92113740 Common - MotA/TolQ/ExbB proton channel Csal_1616 147 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 92114311 Common - UDP-N-acetylmuramate--alanine ligase Csal_2189 207 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 92112359 Common - CRISPR-associated helicase Cas3, protein Csal_0224 75 COG1203 COG1203, Predicted helicases General function prediction only 92113227 Common - Catalase Csal_1100 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 92114236 Common dcd deoxycytidine triphosphate deaminase Csal_2114 151 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 92112520 Nonpathogen - hypothetical protein Csal_0387 4 COG4729 COG4729, Uncharacterized conserved protein Function unknown 92112749 Common gltD glutamate synthase subunit beta Csal_0616 214 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 92113018 Common - hypothetical protein Csal_0890 8 None None None 92114592 Common - NAD-dependent epimerase/dehydratase Csal_2474 169 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92112672 Common - metal dependent phosphohydrolase Csal_0539 16 COG4341 COG4341, Predicted HD phosphohydrolase General function prediction only 92112821 Common - diguanylate cyclase Csal_0689 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92113158 Common - Allophanate hydrolase subunit 1 Csal_1030 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 92112661 Common - molybdopterin dehydrogenase, FAD-binding Csal_0528 88 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 92112744 Common - Pilus assembly protein, PilQ Csal_0611 37 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 92114764 Common - Phosphotransferase system, fructose IIC component Csal_2646 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 92113879 Common - iron-containing alcohol dehydrogenase Csal_1756 172 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 92113660 Common - aromatic acid decarboxylase Csal_1536 152 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 92115410 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Csal_3295 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 92113246 Common - molybdopterin oxidoreductase Csal_1119 189 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 92113868 Common - TRAP dicarboxylate transporter- DctM subunit Csal_1745 120 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92112385 Common - Phosphonate uptake transporter Csal_0250 82 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 92114518 Nonpathogen - hypothetical protein Csal_2400 3 None None None 92113380 Common - dihydrolipoamide dehydrogenase Csal_1254 230 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 92115082 Common - alanine dehydrogenase Csal_2966 168 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 92115076 Common - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Csal_2960 223 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 92113629 Common - MotA/TolQ/ExbB proton channel Csal_1505 88 COG1291 MotA, Flagellar motor component Cell motility and secretion 92113861 Common - short-chain dehydrogenase/reductase SDR Csal_1738 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92115052 Common - 4Fe-4S ferredoxin, iron-sulfur binding Csal_2936 113 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 92113164 Nonpathogen - hypothetical protein Csal_1036 1 None None None 92114830 Common - protein of unknown function DUF748 Csal_2712 44 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 92114842 Common - hypothetical protein Csal_2724 236 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 92114287 Common - 3-phosphoshikimate 1-carboxyvinyltransferase Csal_2165 232 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 92115096 Common - mannonate dehydratase Csal_2980 57 COG1312 UxuA, D-mannonate dehydratase Carbohydrate transport and metabolism 92113194 Common - Curli production assembly/transport component CsgG Csal_1066 16 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 92113216 Common - membrane protein, major facilitator transporter family Csal_1089 29 None None None 92112732 Common hslU ATP-dependent protease ATP-binding subunit Csal_0599 216 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 92113378 Common - Uncharacterized protein UPF0065 Csal_1252 69 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92113294 Common - biotin synthase Csal_1167 178 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 92114194 Common - protein of unknown function UPF0016 Csal_2072 68 COG2119 COG2119, Predicted membrane protein Function unknown 92113225 Common - sigma-24 (FecI-like) Csal_1098 98 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 92112656 Common - hypothetical protein Csal_0523 71 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 92113078 Common - MscS Mechanosensitive ion channel Csal_0950 108 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 92113847 Common - FAD dependent oxidoreductase Csal_1724 125 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92113360 Common - FeS assembly ATPase SufC Csal_1234 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 92114953 Common - SecF protein Csal_2836 204 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 92114307 Common - cell division protein FtsZ Csal_2185 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 92114958 Common - permease for cytosine/purines, uracil, thiamine, allantoin Csal_2841 76 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 92112850 Common - exodeoxyribonuclease VII, large subunit Csal_0718 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 92113369 Common - hypothetical protein Csal_1243 32 COG3098 COG3098, Uncharacterized protein conserved in bacteria Function unknown 92115417 Common - phosphomethylpyrimidine kinase Csal_3302 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 92115341 Common - hypothetical protein Csal_3226 32 COG4134 COG4134, ABC-type uncharacterized transport system, periplasmic component General function prediction only 92113024 Common - deoxyribodipyrimidine photolyase-related protein Csal_0896 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 92114964 Common - transcriptional regulator, BadM/Rrf2 family Csal_2847 174 COG1959 COG1959, Predicted transcriptional regulator Transcription 92113483 Nonpathogen - hypothetical protein Csal_1357 1 None None None 92115380 Common - Phosphate transport system permease protein 1 Csal_3265 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 92114605 Common - 5-dehydro-4-deoxyglucarate dehydratase Csal_2487 226 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 92114158 Nonpathogen - hypothetical protein Csal_2036 1 None None None 92113254 Common - glutathione-dependent formaldehyde-activating, GFA Csal_1127 57 COG3791 COG3791, Uncharacterized conserved protein Function unknown 92112137 Common dnaA chromosomal replication initiation protein Csal_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 92115005 Common - BCCT transporter Csal_2888 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92114389 Common - Uncharacterised conserved protein UCP028301 Csal_2268 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 92114682 Nonpathogen - hypothetical protein Csal_2564 1 None None None 92112396 Common - alpha amylase Csal_0261 166 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 92112146 Common - Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase Csal_0010 48 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 92113133 Common - Oxidoreductase FAD-binding protein Csal_1005 167 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 92114969 Common - Tetratricopeptide TPR_2 Csal_2852 51 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 92113732 Common - type IV pilus assembly PilZ Csal_1608 32 COG3215 PilZ, Tfp pilus assembly protein PilZ Cell motility and secretion / Intracellular trafficking and secretion 92112449 Nonpathogen - hypothetical protein Csal_0315 1 None None None 92113560 Common - helix-turn-helix protein, CopG Csal_1436 9 None None None 92113396 Common - oligoribonuclease Csal_1270 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 92112210 Common - permease for cytosine/purines, uracil, thiamine, allantoin Csal_0075 63 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 92112961 Common - protein of unknown function DUF81 Csal_0833 13 COG0730 COG0730, Predicted permeases General function prediction only 92112681 Common - DNA polymerase I Csal_0548 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 92113584 Common - recombination protein RecR Csal_1460 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 92115060 Common - binding-protein-dependent transport systems inner membrane component Csal_2944 122 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 92113375 Common - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Csal_1249 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 92113569 Common - protein of unknown function DUF883, ElaB Csal_1445 25 COG4575 ElaB, Uncharacterized conserved protein Function unknown 92114616 Common - protein of unknown function DUF1232 Csal_2498 24 COG3339 COG3339, Uncharacterized conserved protein Function unknown 92113851 Common - Sugar transporter Csal_1728 178 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113896 Nonpathogen - hypothetical protein Csal_1773 1 None None None 92112274 Common - alpha/beta hydrolase Csal_0139 51 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92112827 Common - protein of unknown function UPF0029 Csal_0695 132 COG1739 COG1739, Uncharacterized conserved protein Function unknown 92112231 Common - D-3-phosphoglycerate dehydrogenase Csal_0096 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 92112713 Common - tRNA(Ile)-lysidine synthetase-like protein Csal_0580 130 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 92112717 Common rho transcription termination factor Rho Csal_0584 203 COG1158 Rho, Transcription termination factor Transcription 92113755 Common rnc ribonuclease III Csal_1631 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 92113515 Common - phage virion morphogenesis (putative tail completion) protein Csal_1389 15 None None None 92112938 Common - hypothetical protein Csal_0810 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 92112557 Common rplB 50S ribosomal protein L2 Csal_0424 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 92112399 Common - Silent information regulator protein Sir2 Csal_0265 151 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 92113077 Common - Hydrophobe/amphiphile efflux-1 HAE1 Csal_0949 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 92115260 Common - hypothetical protein Csal_3145 179 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 92115046 Common - Alcohol dehydrogenase, zinc-binding Csal_2930 93 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92112527 Common - protein of unknown function DUF6, transmembrane Csal_0394 31 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 92114138 Common - flagellar biosynthetic protein FlhB Csal_2016 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 92114873 Common - hypothetical protein Csal_2755 29 COG4258 COG4258, Predicted exporter General function prediction only 92113822 Common - glycosyl transferase, group 1 Csal_1699 181 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92112427 Common - Shikimate 5-dehydrogenase Csal_0293 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 92115155 Common - hypothetical protein Csal_3040 27 COG1507 COG1507, Uncharacterized conserved protein Function unknown 92112629 Common - competence lipoprotein ComL, putative Csal_0496 123 COG4105 ComL, DNA uptake lipoprotein General function prediction only 92114899 Common - ABC transporter related Csal_2781 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 92113317 Nonpathogen - hypothetical protein Csal_1190 1 None None None 92114217 Common - uracil phosphoribosyltransferase Csal_2095 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 92113645 Common - translation-associated GTPase Csal_1521 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 92114289 Common - phosphoserine aminotransferase Csal_2167 119 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 92114890 Common - hypothetical protein Csal_2772 78 COG0398 COG0398, Uncharacterized conserved protein Function unknown 92114980 Common - coproporphyrinogen III oxidase Csal_2863 112 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 92112983 Common aceE pyruvate dehydrogenase subunit E1 Csal_0855 153 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 92112228 Common - hypothetical protein Csal_0093 54 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 92114265 Common - major facilitator superfamily MFS_1 Csal_2143 99 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113981 Common - 3-demethylubiquinone-9 3-methyltransferase Csal_1858 172 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 92114788 Common - TRAP transporter, 4TM/12TM fusion protein Csal_2670 106 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 92114178 Common - tRNA--hydroxylase Csal_2056 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 92112313 Common - alpha/beta hydrolase Csal_0178 141 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114600 Nonpathogen - hypothetical protein Csal_2482 1 None None None 92113535 Nonpathogen - hypothetical protein Csal_1410 1 None None None 92112502 Common - aldo/keto reductase Csal_0369 161 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 92114901 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_2783 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 92112638 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase Csal_0505 150 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 92115191 Common - hypothetical protein Csal_3076 182 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 92113414 Common - acyltransferase 3 Csal_1288 7 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 92112507 Nonpathogen - LrgA Csal_0374 2 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 92114477 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2357 89 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 92113437 Common - hypothetical protein Csal_1311 20 None None None 92113916 Common - LrgA Csal_1793 15 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 92115350 Common - (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA Csal_3235 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 92114965 Common - aminotransferase, class V Csal_2848 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 92114947 Common - diguanylate phosphodiesterase Csal_2830 161 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 92114064 Common - DNA polymerase III, epsilon subunit Csal_1941 189 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 92114426 Common ureC urease subunit alpha Csal_2305 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 92114884 Common - band 7 protein Csal_2766 206 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 92113108 Common - choline/carnitine/betaine transport Csal_0980 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92113756 Common - GTP-binding protein Era Csal_1632 236 COG1159 Era, GTPase General function prediction only 92112771 Common - sorbitol dehydrogenase Csal_0638 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113936 Nonpathogen - hypothetical protein Csal_1813 1 None None None 92114851 Common - transcriptional regulator, GntR family Csal_2733 165 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 92114228 Common glpD glycerol-3-phosphate dehydrogenase Csal_2106 148 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 92113342 Common sdhB succinate dehydrogenase iron-sulfur subunit Csal_1216 205 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 92114418 Nonpathogen - hypothetical protein Csal_2297 1 None None None 92114810 Common - para-aminobenzoate synthase, component I Csal_2692 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 92115250 Common - D-tyrosyl-tRNA deacylase Csal_3135 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 92112918 Common - N-acylglucosamine 2-epimerase Csal_0790 29 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 92112704 Common - surface antigen (D15) Csal_0571 161 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 92114892 Common - transcriptional regulator, LysR family Csal_2774 120 COG0583 LysR, Transcriptional regulator Transcription 92114062 Common - Sterol-binding Csal_1939 16 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 92114116 Common - sulfate permease Csal_1994 160 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 92113922 Common - threonyl-tRNA synthetase Csal_1799 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92115160 Common - aldo/keto reductase Csal_3045 198 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 92112164 Common - Na+/solute symporter Csal_0028 136 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92113590 Common - von Willebrand factor, type A Csal_1466 12 None None None 92112754 Common - DNA mismatch repair protein MutS Csal_0621 204 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 92112421 Common - hypothetical protein Csal_0287 25 None None None 92114717 Common - beta-lactamase-like protein Csal_2599 195 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 92112451 Common - diguanylate cyclase/phosphodiesterase with GAF sensor Csal_0318 171 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 92114692 Common - response regulator receiver domain protein (CheY-like) Csal_2574 207 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 92115421 Common - transcriptional regulator, LuxR family Csal_3306 140 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92112461 Common - protein of unknown function DUF453 Csal_0328 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 92114433 Common - inner-membrane translocator Csal_2312 141 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 92113887 Common - transcriptional regulator, GntR family Csal_1764 126 COG2188 PhnF, Transcriptional regulators Transcription 92113691 Common - transcription-repair coupling factor Csal_1567 233 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 92114669 Common - Serine O-acetyltransferase Csal_2551 191 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 92112591 Common - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Csal_0458 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 92114504 Common - acetylornithine deacetylase (ArgE) Csal_2386 194 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 92114368 Nonpathogen - hypothetical protein Csal_2246 1 None None None 92114344 Common - Phosphatase kdsC Csal_2222 111 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 92112283 Common - transcriptional regulator, LysR family Csal_0148 119 COG0583 LysR, Transcriptional regulator Transcription 92114074 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_1951 192 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92113156 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Csal_1028 34 COG3565 COG3565, Predicted dioxygenase of extradiol dioxygenase family General function prediction only 92113698 Common - Na(+)-translocating NADH-quinone reductase subunit F Csal_1574 154 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 92114480 Common - YbhB and YbcL Csal_2360 124 COG1881 COG1881, Phospholipid-binding protein General function prediction only 92113944 Common - major facilitator superfamily MFS_1 Csal_1821 71 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92114751 Common - protein of unknown function DUF368 Csal_2633 50 COG2035 COG2035, Predicted membrane protein Function unknown 92115352 Common - transcriptional regulator, AraC family Csal_3237 115 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92113520 Common - putative bacteriophage protein Csal_1394 10 COG5004 COG5004, P2-like prophage tail protein X General function prediction only 92113720 Common - maf protein Csal_1596 193 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 92114259 Common - hypothetical protein Csal_2137 4 None None None 92114428 Common - urease, gamma subunit Csal_2307 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 92114160 Common - ExsB Csal_2038 177 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 92114438 Common - hypothetical protein Csal_2317 26 None None None 92112838 Common - intracellular septation protein A Csal_0706 92 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 92113676 Common - lipoyl synthase Csal_1552 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 92114920 Common - GCN5-related N-acetyltransferase Csal_2803 22 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 92115133 Common - cytochrome c assembly protein Csal_3018 66 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 92112532 Common - Oligopeptidase A Csal_0399 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 92113894 Common - Malate dehydrogenase (NADP+) Csal_1771 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 92113200 Common - TRAP dicarboxylate transporter, DctP subunit Csal_1072 104 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92112333 Common - protein of unknown function DUF427 Csal_0198 42 COG2343 COG2343, Uncharacterized protein conserved in bacteria Function unknown 92113979 Common - short-chain dehydrogenase/reductase SDR Csal_1856 221 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114748 Common - Type I secretion outer membrane protein, TolC Csal_2630 139 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 92114361 Common - rod shape-determining protein MreC Csal_2239 154 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 92113653 Common - peptide chain release factor 1 Csal_1529 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 92112468 Common - Alcohol dehydrogenase GroES-like protein Csal_0335 189 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92115016 Common - bacterioferritin Csal_2899 102 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 92113595 Common - VacJ-like lipoprotein Csal_1471 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 92112477 Common - Rieske (2Fe-2S) protein Csal_0344 78 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 92114034 Common - hypothetical protein Csal_1911 3 None None None 92114997 Common - plasmid maintenance system killer Csal_2880 65 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 92113600 Common - periplasmic phosphate binding protein Csal_1476 137 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 92114599 Common - Glucarate dehydratase Csal_2481 62 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92113972 Common - 4-hydroxybenzoyl-CoA thioesterase Csal_1849 135 COG0824 FcbC, Predicted thioesterase General function prediction only 92112428 Common - 3-dehydroquinate dehydratase Csal_0294 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 92113373 Common - GtrA-like protein Csal_1247 2 COG2246 COG2246, Predicted membrane protein Function unknown 92113454 Common - hypothetical protein Csal_1328 11 COG3945 COG3945, Uncharacterized conserved protein Function unknown 92113033 Common - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Csal_0905 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92112565 Common rplX 50S ribosomal protein L24 Csal_0432 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 92113998 Common - pyridine nucleotide-disulphide oxidoreductase dimerisation region Csal_1875 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 92112574 Common secY preprotein translocase subunit SecY Csal_0441 239 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 92115206 Common - ABC transporter related Csal_3091 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 92114665 Common - methyltransferase Csal_2547 93 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 92113398 Common - protein of unknown function UPF0031 Csal_1272 219 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 92113331 Nonpathogen - hypothetical protein Csal_1205 1 None None None 92114375 Common - Rhs element Vgr protein Csal_2254 57 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 92112484 Common - MltA-interacting MipA Csal_0351 41 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 92112539 Common - Biotin--acetyl-CoA-carboxylase ligase Csal_0406 209 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 92114318 Common - Peptidoglycan glycosyltransferase Csal_2196 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 92113426 Common - 17 kDa surface antigen Csal_1300 24 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 92113131 Common - hypothetical protein Csal_1003 2 None None None 92113463 Common - transcriptional regulator, LysR family Csal_1337 115 COG0583 LysR, Transcriptional regulator Transcription 92112615 Common - lipoprotein signal peptidase Csal_0482 199 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 92114321 Common - Protein of unknown function UPF0011 Csal_2199 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 92114773 Common - RNA binding S1 Csal_2655 213 COG2183 Tex, Transcriptional accessory protein Transcription 92114862 Common - ABC transporter related Csal_2744 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 92113967 Common aspS aspartyl-tRNA synthetase Csal_1844 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92113241 Common - Cyanophycin synthetase Csal_1114 151 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 92114485 Nonpathogen - HKD family nuclease-like protein Csal_2365 3 COG3886 COG3886, Predicted HKD family nuclease DNA replication, recombination, and repair 92115105 Common - signal recognition particle-docking protein FtsY Csal_2989 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 92112951 Common - protein of unknown function DUF606 Csal_0823 41 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 92114574 Common - short-chain dehydrogenase/reductase SDR Csal_2456 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114909 Common - GCN5-related N-acetyltransferase Csal_2792 76 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 92112196 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_0061 206 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92114492 Common - Alcohol dehydrogenase, zinc-binding Csal_2372 180 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92113284 Common - protein of unknown function DUF1415 Csal_1157 30 COG3310 COG3310, Uncharacterized protein conserved in bacteria Function unknown 92112255 Common - extracellular solute-binding protein, family 3 Csal_0120 116 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92113500 Nonpathogen - hypothetical protein Csal_1374 1 None None None 92115243 Common - NADH-quinone oxidoreductase, F subunit Csal_3128 160 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 92113060 Common - Glucose-6-phosphate isomerase Csal_0932 200 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 92113957 Common - hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region Csal_1834 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 92114441 Common - anthranilate phosphoribosyltransferase Csal_2320 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 92114871 Common - glycosyl transferase, group 2 family protein Csal_2753 42 COG4261 COG4261, Predicted acyltransferase General function prediction only 92112946 Common - transcriptional regulator, LysR family Csal_0818 185 COG0583 LysR, Transcriptional regulator Transcription 92112433 Common - coenzyme A transferase Csal_0299 41 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 92113783 Common - type II secretion system protein E Csal_1659 230 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 92114861 Common - Phosphonate-binding periplasmic protein Csal_2743 78 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 92112410 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0276 73 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92112200 Common - homocysteine S-methyltransferase Csal_0065 147 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 92113684 Common - DNA topoisomerase I Csal_1560 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 92113097 Common - periplasmic sensor signal transduction histidine kinase Csal_0969 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92115129 Common - tRNA (guanine-N1)-methyltransferase Csal_3014 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 92114221 Common - riboflavin synthase subunit alpha Csal_2099 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 92113940 Common - glycosyl transferase, group 1 Csal_1817 216 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92115192 Common - preprotein translocase, SecG subunit Csal_3077 20 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 92112185 Common - protein of unknown function DUF558 Csal_0049 199 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 92114101 Common - flagellar basal-body rod protein FlgB Csal_1978 96 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 92113616 Common - periplasmic binding protein Csal_1492 132 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 92114791 Common - protein of unknown function DUF192 Csal_2673 88 COG1430 COG1430, Uncharacterized conserved protein Function unknown 92114231 Common - protein of unknown function UPF0047 Csal_2109 97 COG0432 COG0432, Uncharacterized conserved protein Function unknown 92112419 Common - feruloyl-CoA synthase Csal_0285 191 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92114448 Common - Excinuclease ABC, C subunit-like protein Csal_2327 35 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 92114674 Common - Nucleoside diphosphate pyrophosphatase Csal_2556 59 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 92113662 Common - phosphoesterase, PA-phosphatase related Csal_1538 104 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 92113704 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_1580 203 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92113793 Nonpathogen - hypothetical protein Csal_1669 4 None None None 92113115 Common - transcriptional regulator, AraC family Csal_0987 111 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92113761 Common - RNA methyltransferase, TrmA family Csal_1637 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 92115269 Common - malate synthase G Csal_3154 79 COG2225 AceB, Malate synthase Energy production and conversion 92112687 Common - SlyX Csal_0554 11 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 92113815 Common - Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Csal_1692 165 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 92113393 Common - amidophosphoribosyltransferase Csal_1267 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 92114457 Common - protein of unknown function UPF0054 Csal_2336 170 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 92114675 Common - hypothetical protein Csal_2557 16 None None None 92112701 Common - phosphatidate cytidylyltransferase Csal_0568 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 92113004 Common - transcriptional regulator, Crp/Fnr family Csal_0876 114 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 92112372 Nonpathogen - hypothetical protein Csal_0237 1 None None None 92115318 Nonpathogen - YfaZ Csal_3203 1 None None None 92114316 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Csal_2194 203 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 92114398 Common - hypothetical protein Csal_2277 6 None None None 92113053 Common - gluconate transporter Csal_0925 81 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 92114637 Nonpathogen - hypothetical protein Csal_2519 1 None None None 92113367 Common - protein of unknown function DUF785 Csal_1241 38 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 92113719 Common - signal peptide peptidase SppA, 36K type Csal_1595 186 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 92113162 Common - aminotransferase, class I and II Csal_1034 234 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 92114069 Common - extracellular solute-binding protein, family 5 Csal_1946 180 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 92112915 Common - YCII-related Csal_0787 6 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 92113579 Common - protein of unknown function DUF112, transmembrane Csal_1455 80 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92114461 Common - Alcohol dehydrogenase, zinc-binding Csal_2340 166 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92113730 Common - Thymidylate kinase Csal_1606 221 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 92112596 Common - short-chain dehydrogenase/reductase SDR Csal_0463 207 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 92115303 Common - enoyl-CoA hydratase Csal_3188 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 92112680 Common - hypothetical protein Csal_0547 15 None None None 92113476 Common - Protein-methionine-S-oxide reductase Csal_1350 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 92114736 Common - protein of unknown function DUF214 Csal_2618 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 92113081 Nonpathogen - hypothetical protein Csal_0953 1 None None None 92114161 Common - hypothetical protein Csal_2039 133 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 92114900 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_2782 170 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 92115141 Common - septum site-determining protein MinD Csal_3026 150 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 92112245 Common - nucleoside-specific channel-forming protein, Tsx Csal_0110 19 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 92114729 Common - binding-protein-dependent transport systems inner membrane component Csal_2611 156 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 92115213 Common - SmpA/OmlA Csal_3098 63 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 92112995 Common - manganese transport regulator MntR Csal_0867 87 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 92113739 Common - hypothetical protein Csal_1615 18 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 92115189 Common - translation initiation factor IF-2 Csal_3074 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 92112346 Common - binding-protein-dependent transport systems inner membrane component Csal_0211 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 92112154 Common - Three-deoxy-D-manno-octulosonic-acid transferase-like protein Csal_0018 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 92113991 Common - transcriptional regulator, LysR family Csal_1868 164 COG0583 LysR, Transcriptional regulator Transcription 92113138 Common - thiamine pyrophosphate enzyme-like TPP-binding Csal_1010 219 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 92115215 Common - cyclase/dehydrase Csal_3100 102 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 92112890 Common - glutathione-dependent formaldehyde-activating, GFA Csal_0761 61 COG3791 COG3791, Uncharacterized conserved protein Function unknown 92115175 Common - transcriptional regulators, TraR/DksA family Csal_3060 156 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 92115030 Common - transcriptional regulator, AraC family Csal_2914 91 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92112623 Common - methylation Csal_0490 6 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 92113536 Nonpathogen - hypothetical protein Csal_1411 1 None None None 92112933 Common - hypothetical protein Csal_0805 19 None None None 92113321 Common - binding-protein-dependent transport systems inner membrane component Csal_1194 139 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 92115050 Common - beta-ketoacyl synthase Csal_2934 198 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92114924 Common - Arginine N-succinyltransferase Csal_2807 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 92112360 Common - hypothetical protein Csal_0225 21 None None None 92114584 Common - chorismate synthase Csal_2466 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 92115023 Common - hypothetical protein Csal_2906 4 None None None 92115169 Common - Protein of unknown function UPF0001 Csal_3054 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 92114186 Common - Enoyl-CoA hydratase/isomerase Csal_2064 131 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 92115228 Common - Diaminopimelate epimerase Csal_3113 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 92114662 Common - DNA topoisomerase IV subunit B Csal_2544 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 92114085 Common - flagellar motor switch protein FliM Csal_1962 111 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 92114247 Common - glutathione S-transferase-like protein Csal_2125 84 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92115360 Common - ATP-dependent DNA helicase RecG Csal_3245 211 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 92114466 Common holA DNA polymerase III subunit delta Csal_2346 94 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 92112921 Common - putative glutathione S-transferase YghU Csal_0793 96 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92112736 Common - primosome assembly protein PriA Csal_0603 212 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 92115327 Common - TRAP dicarboxylate transporter- DctM subunit Csal_3212 134 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92113455 Common - Nitrate transporter Csal_1329 156 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 92112308 Common - Class I peptide chain release factor Csal_0173 110 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 92112845 Common - N-acetylglutamate synthase Csal_0713 191 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 92114914 Common - protein of unknown function DUF924 Csal_2797 63 COG3803 COG3803, Uncharacterized protein conserved in bacteria Function unknown 92114205 Common - binding-protein-dependent transport systems inner membrane component Csal_2083 185 COG4662 TupA, ABC-type tungstate transport system, periplasmic component Coenzyme metabolism 92114393 Common - protein of unknown function DUF1305 Csal_2272 47 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 92115297 Common - TonB-dependent siderophore receptor Csal_3182 100 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 92115391 Common - protein of unknown function DUF161 Csal_3276 33 COG1284 COG1284, Uncharacterized conserved protein Function unknown 92115371 Common - heat shock protein Hsp20 Csal_3256 136 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 92115180 Common - 3-methyl-2-oxobutanoate hydroxymethyltransferase Csal_3065 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 92112899 Common - transcriptional regulator, TetR family Csal_0771 28 COG1309 AcrR, Transcriptional regulator Transcription 92114020 Common - flavodoxin/nitric oxide synthase Csal_1897 112 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 92113556 Common - ABC-2 Csal_1431 127 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 92115224 Common - porphobilinogen deaminase Csal_3109 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 92112698 Common pyrH uridylate kinase Csal_0565 231 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 92115398 Common - ATP synthase F1, epsilon subunit Csal_3283 86 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 92113385 Common - tRNA pseudouridine synthase A Csal_1259 233 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 92115074 Common - protein of unknown function DUF699, ATPase putative Csal_2958 48 COG1444 COG1444, Predicted P-loop ATPase fused to an acetyltransferase General function prediction only 92113389 Common - acetyl-CoA carboxylase, carboxyl transferase, beta subunit Csal_1263 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 92113918 Common - anion transporter Csal_1795 97 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 92113406 Common - HflC protein Csal_1280 160 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 92113204 Common - transcriptional regulator, GntR family Csal_1076 137 COG1802 GntR, Transcriptional regulators Transcription 92112742 Common - Fimbrial assembly Csal_0609 43 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 92114463 Common - hypothetical protein Csal_2343 9 None None None 92115338 Nonpathogen - hypothetical protein Csal_3223 16 None None None 92113949 Common - response regulator receiver domain protein (CheY-like) Csal_1826 141 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 92113362 Common - cysteine desulfurases, SufS subfamily Csal_1236 239 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 92114770 Common - anti-RNA polymerase sigma 70 factor Csal_2652 24 COG3160 Rsd, Regulator of sigma D Transcription 92114234 Common - phosphoribosylformylglycinamidine cyclo-ligase Csal_2112 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 92112792 Common - TRAP dicarboxylate transporter, DctP subunit Csal_0660 99 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92112814 Common - (Acyl-carrier protein) phosphodiesterase Csal_0682 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 92114334 Common - Histidinol dehydrogenase Csal_2212 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 92114126 Nonpathogen - hypothetical protein Csal_2004 12 None None None 92114401 Common - serine/threonine protein kinase Csal_2280 136 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 92115419 Common - glutamate-1-semialdehyde-2,1-aminomutase Csal_3304 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 92112409 Common - transcriptional regulator, LacI family Csal_0275 124 COG1609 PurR, Transcriptional regulators Transcription 92114192 Common - SOS-response transcriptional repressor, LexA Csal_2070 171 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 92113526 Common - Phage portal protein, PBSX Csal_1400 23 COG5518 COG5518, Bacteriophage capsid portal protein General function prediction only 92112431 Common - transcriptional regulator, IclR family Csal_0297 119 COG1414 IclR, Transcriptional regulator Transcription 92115084 Common - conserved hypothetical protein 95 Csal_2968 147 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 92113218 Common - Alcohol dehydrogenase GroES-like protein Csal_1091 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92113809 Common - Sulfate adenylyltransferase, small subunit Csal_1686 138 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 92114881 Common - UspA Csal_2763 54 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 92114781 Common - oxidoreductase-like protein Csal_2663 160 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 92114844 Nonpathogen - hypothetical protein Csal_2726 1 None None None 92113714 Common - protein tyrosine phosphatase Csal_1590 140 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 92115343 Nonpathogen - hypothetical protein Csal_3228 1 None None None 92112249 Common - channel protein, hemolysin III family Csal_0114 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 92113229 Common - Lysine exporter protein (LYSE/YGGA) Csal_1102 105 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92113758 Common - pyridoxal phosphate biosynthetic protein PdxJ Csal_1634 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 92113627 Common - nucleoside transporter Csal_1503 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 92113838 Common - glycosyl transferase, group 1 Csal_1715 215 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92112674 Common - transcriptional regulator, AraC family Csal_0541 110 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92113196 Common - Na+/solute symporter Csal_1068 172 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92114387 Common - hypothetical protein Csal_2266 4 None None None 92114391 Common - protein of unknown function DUF1316 Csal_2270 19 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 92114607 Common - phosphohistidine phosphatase, SixA Csal_2489 65 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 92114309 Common - cell division protein FtsQ Csal_2187 70 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 92115382 Common - binding-protein-dependent transport systems inner membrane component Csal_3267 224 COG4590 COG4590, ABC-type uncharacterized transport system, permease component General function prediction only 92112356 Common - ABC-3 Csal_0221 174 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 92114041 Common - protein of unknown function DUF1244 Csal_1918 38 COG3492 COG3492, Uncharacterized protein conserved in bacteria Function unknown 92112868 Nonpathogen - hypothetical protein Csal_0739 1 None None None 92112301 Common - dienelactone hydrolase Csal_0166 77 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 92114580 Common - transcriptional regulator, AraC family Csal_2462 146 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92114808 Common - protein of unknown function DUF336 Csal_2690 17 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 92114048 Common - hypothetical protein Csal_1925 41 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 92114698 Common - Phosphatidylglycerophosphatase Csal_2580 105 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 92112809 Common - TRAP C4-dicarboxylate transport system permease DctM subunit Csal_0677 122 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 92113274 Common - acetylornithine deacetylase (ArgE) Csal_1147 205 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 92114801 Common - GCN5-related N-acetyltransferase Csal_2683 52 COG0456 RimI, Acetyltransferases General function prediction only 92114758 Common - hypothetical protein Csal_2640 53 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 92112202 Common - hypothetical protein Csal_0067 47 COG3195 COG3195, Uncharacterized protein conserved in bacteria Function unknown 92112801 Common - two component transcriptional regulator, winged helix family Csal_0669 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92113235 Common - protein of unknown function DUF938 Csal_1108 49 None None None 92112925 Common - Alcohol dehydrogenase, zinc-binding Csal_0797 116 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 92112173 Common - OsmC-like protein Csal_0037 41 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 92112505 Common - Glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) Csal_0372 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 92114076 Common - FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csal_1953 38 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 92114538 Common - 2-methylcitrate synthase/citrate synthase II Csal_2420 194 COG0372 GltA, Citrate synthase Energy production and conversion 92114007 Common - protein of unknown function DUF37 Csal_1884 180 COG0759 COG0759, Uncharacterized conserved protein Function unknown 92112605 Nonpathogen - hypothetical protein Csal_0472 1 None None None 92113934 Common - glycine dehydrogenase Csal_1811 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 92115276 Common - nitrogen regulatory protein P-II (GlnB, GlnK) Csal_3161 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 92113187 Common - diguanylate cyclase with PAS/PAC and GAF sensors Csal_1059 181 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 92115112 Common - hypothetical protein Csal_2996 6 None None None 92114552 Common - protein of unknown function DUF77 Csal_2434 45 COG0011 COG0011, Uncharacterized conserved protein Function unknown 92115433 Common rpmH 50S ribosomal protein L34 Csal_3318 103 None None None 92114417 Common - hypothetical protein Csal_2296 163 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 92114148 Common - chemotaxis MotA protein Csal_2026 93 COG1291 MotA, Flagellar motor component Cell motility and secretion 92112746 Common aroK shikimate kinase Csal_0613 199 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 92114058 Common - alpha/beta hydrolase Csal_1935 183 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114299 Common - Dephospho-CoA kinase Csal_2177 201 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 92114859 Common - glucose-6-phosphate 1-dehydrogenase Csal_2741 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 92112467 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0334 134 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92112640 Common - histidinol-phosphate aminotransferase Csal_0507 228 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 92112214 Common - hypothetical protein Csal_0079 33 COG3257 GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization General function prediction only 92112703 Common - Peptidase M50, putative membrane-associated zinc metallopeptidase Csal_0570 213 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 92114984 Common - Peptide deformylase Csal_2867 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 92114704 Common - hypothetical protein Csal_2586 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 92114051 Common - metallophosphoesterase Csal_1928 34 None None None 92115424 Common - OmpA/MotB Csal_3309 173 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 92114533 Common - binding-protein-dependent transport systems inner membrane component Csal_2415 156 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 92113820 Nonpathogen - hypothetical protein Csal_1697 1 None None None 92114083 Common - flagellar hook-length control protein Csal_1960 41 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 92113742 Common - Biopolymer transport protein ExbD/TolR Csal_1618 92 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 92112377 Nonpathogen - hypothetical protein Csal_0242 1 None None None 92112153 Common - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase Csal_0017 146 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 92113829 Common - Betaine-aldehyde dehydrogenase Csal_1706 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113171 Common - periplasmic binding protein Csal_1043 75 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 92114917 Common - transcriptional regulator, LysR family Csal_2800 141 COG0583 LysR, Transcriptional regulator Transcription 92114313 Common - cell cycle protein Csal_2191 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 92113127 Common - sarcosine oxidase, delta subunit family Csal_0999 33 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 92113643 Common - carboxyl-terminal protease Csal_1519 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 92115387 Common - transcriptional regulator, RpiR family Csal_3272 93 COG1737 RpiR, Transcriptional regulators Transcription 92113833 Nonpathogen - hypothetical protein Csal_1710 1 None None None 92113134 Common - cation efflux protein Csal_1006 57 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 92112525 Common - transcriptional regulator, AraC family Csal_0392 45 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92114889 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2771 64 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92115048 Nonpathogen - hypothetical protein Csal_2932 1 None None None 92112303 Common - TspO and MBR like proteins Csal_0168 65 COG3476 COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) Signal transduction mechanisms 92113106 Common - cyclic nucleotide-binding domain (cNMP-BD) protein Csal_0978 94 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 92112770 Common - HAD-superfamily hydrolase subfamily IA, variant 3 Csal_0637 136 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 92112663 Common - hypothetical protein Csal_0530 98 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 92112500 Common - RbsD or FucU transport Csal_0367 7 COG4154 FucU, Fucose dissimilation pathway protein FucU Carbohydrate transport and metabolism 92112509 Common - hypothetical protein Csal_0376 117 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 92112880 Common - cold-shock DNA-binding domain protein Csal_0751 180 COG1278 CspC, Cold shock proteins Transcription 92115065 Common - histidine triad (HIT) protein Csal_2949 58 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 92115119 Common - membrane protein involved in aromatic hydrocarbon degradation Csal_3004 82 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 92114257 Common - transcriptional regulator, Crp/Fnr family Csal_2135 101 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 92113581 Common - hypothetical protein Csal_1457 10 COG0439 AccC, Biotin carboxylase Lipid metabolism 92114475 Common - binding-protein-dependent transport systems inner membrane component Csal_2355 184 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 92114982 Common - DNA processing protein DprA, putative Csal_2865 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 92114979 Common - shikimate 5-dehydrogenase Csal_2862 214 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 92115395 Common - glucosamine--fructose-6-phosphate aminotransferase, isomerizing Csal_3280 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 92112265 Common - Rieske (2Fe-2S) protein Csal_0130 87 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 92115322 Common - hypothetical protein Csal_3207 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 92112833 Common - Citrate carrier protein Csal_0701 30 COG3493 CitS, Na+/citrate symporter Energy production and conversion 92114590 Common - hypothetical protein Csal_2472 7 None None None 92115259 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Csal_3144 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 92112443 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0309 104 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92114972 Common - histidyl-tRNA synthetase Csal_2855 248 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92114641 Common - AMP-dependent synthetase and ligase Csal_2523 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92114272 Nonpathogen - hypothetical protein Csal_2150 1 None None None 92112584 Common - anaerobic nitric oxide reductase transcription regulator Csal_0451 168 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 92114944 Common - acyl-CoA dehydrogenase-like protein Csal_2827 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 92114285 Common rpsA 30S ribosomal protein S1 Csal_2163 217 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 92114967 Common - Nucleoside-diphosphate kinase Csal_2850 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 92113120 Common - electron transfer flavoprotein, alpha subunit Csal_0992 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 92114563 Common - hypothetical protein Csal_2445 41 COG2915 COG2915, Uncharacterized protein involved in purine metabolism General function prediction only 92114857 Common - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Csal_2739 125 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 92114945 Common - Lysine exporter protein (LYSE/YGGA) Csal_2828 113 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92113955 Common - OsmC-like protein Csal_1832 40 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 92113657 Common - hypothetical protein Csal_1533 18 COG3134 COG3134, Predicted outer membrane lipoprotein Function unknown 92115267 Common - Hemolysin activator HlyB Csal_3152 63 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 92112857 Common - putative tricarboxylic transport membrane protein Csal_0725 12 None None None 92113267 Common - aldehyde dehydrogenase Csal_1140 192 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92115040 Common - peptidase M24 Csal_2924 195 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 92113938 Common - glycine cleavage system T protein Csal_1815 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 92112666 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_0533 171 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 92112641 Common - NADH:flavin oxidoreductase/NADH oxidase Csal_0508 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 92113734 Common - protein of unknown function DUF1285 Csal_1610 44 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 92113767 Common - negative regulator of AmpC, AmpD Csal_1643 108 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 92113377 Nonpathogen - hypothetical protein Csal_1251 1 None None None 92113140 Common - glutathione S-transferase-like protein Csal_1012 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92115374 Common - transcriptional regulator, AraC family Csal_3259 114 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92113213 Common - cysteine synthase A Csal_1086 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 92115357 Common - hypothetical protein Csal_3242 3 None None None 92113252 Common - beta alanine--pyruvate transaminase Csal_1125 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 92112988 Common - protein of unknown function DUF548 Csal_0860 49 None None None 92114290 Common - DNA gyrase, A subunit Csal_2168 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 92113428 Common - MadN protein Csal_1302 34 None None None 92114198 Common - molybdenum cofactor synthesis-like protein Csal_2076 204 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 92112555 Common - ribosomal protein L4/L1e Csal_0422 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 92113447 Common - transcriptional coactivator/pterin dehydratase Csal_1321 94 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 92112963 Common - transcriptional regulator, AraC family Csal_0835 83 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92114684 Common - conserved hypothetical protein; putative conserved domain Csal_2566 11 None None None 92112148 Common - glycosyl transferase, family 9 Csal_0012 22 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 92113969 Common - crossover junction endodeoxyribonuclease RuvC Csal_1846 196 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 92113435 Common - Rhomboid-like protein Csal_1309 43 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 92115142 Common - septum site-determining protein MinC Csal_3027 109 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 92114151 Common - flagellar protein FhlB-like protein Csal_2029 105 COG2257 COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB Function unknown 92114548 Common - protein of unknown function UPF0118 Csal_2430 161 COG0628 PerM, Predicted permease General function prediction only 92112250 Common - GTP cyclohydrolase II Csal_0115 198 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 92113566 Nonpathogen - hypothetical protein Csal_1442 2 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92115003 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2886 72 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92112390 Common - SSS sodium solute transporter superfamily Csal_0255 177 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92113777 Common - transcriptional regulator, AraC family Csal_1653 44 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92113853 Common - transcriptional repressor of the xylose operon Csal_1730 153 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 92113446 Common - aromatic amino acid aminotransferase Csal_1320 71 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 92112965 Common - hypothetical protein Csal_0837 6 None None None 92113394 Common - O-succinylhomoserine sulfhydrylase Csal_1268 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 92113770 Nonpathogen - hypothetical protein Csal_1646 1 None None None 92114030 Common - amino acid permease-associated region Csal_1907 191 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 92113513 Common - GPW/gp25 Csal_1387 32 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 92114906 Common - hypothetical protein Csal_2788 15 None None None 92113519 Nonpathogen - hypothetical protein Csal_1393 1 None None None 92115153 Common - thioesterase superfamily Csal_3038 47 COG0824 FcbC, Predicted thioesterase General function prediction only 92112143 Common glyQ glycyl-tRNA synthetase subunit alpha Csal_0007 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 92114950 Common - queuine tRNA-ribosyltransferase Csal_2833 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 92113751 Common - Negative regulator of sigma E activity-like protein Csal_1627 3 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 92112981 Common - nicotinate-nucleotide pyrophosphorylase Csal_0853 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 92112757 Common - regulatory protein RecX Csal_0624 58 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 92114640 Common - protein of unknown function DUF454 Csal_2522 85 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 92113988 Common - hypothetical protein Csal_1865 85 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 92113016 Common - ribosomal protein S6 Csal_0888 199 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 92113708 Common - hypothetical protein Csal_1584 50 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 92112288 Common - ABC transporter related Csal_0153 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 92114766 Common - Phosphoenolpyruvate-protein phosphotransferase Csal_2648 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 92112932 Common - aldo/keto reductase Csal_0804 203 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 92113655 Common - transcriptional regulator, AsnC family Csal_1531 165 COG1522 Lrp, Transcriptional regulators Transcription 92113602 Common - Phosphate transport system permease protein 2 Csal_1478 225 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 92114032 Common - formate dehydrogenase, subunit FdhD Csal_1909 134 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 92115121 Common - Copper-translocating P-type ATPase Csal_3006 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 92113588 Common - Oligopeptidase B Csal_1464 111 COG1770 PtrB, Protease II Amino acid transport and metabolism 92112613 Common - riboflavin biosynthesis protein RibF Csal_0480 211 COG0196 RibF, FAD synthase Coenzyme metabolism 92113142 Common - Drug resistance transporter EmrB/QacA subfamily Csal_1014 181 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 92113058 Common - Peptidase C56, PfpI Csal_0930 127 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 92113538 Common - Hydantoin racemase-like protein Csal_1413 37 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 92112978 Common - putative transcriptional regulator Csal_0850 142 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 92115103 Common - protein of unknown function DUF214 Csal_2987 80 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 92115413 Common - extracellular solute-binding protein, family 3 Csal_3298 185 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92112452 Common - Appr-1-p processing Csal_0319 116 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 92113465 Common - tRNA (uracil-5-)-methyltransferase Csal_1339 137 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 92113577 Common - Uncharacterized protein UPF0065 Csal_1453 72 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92112829 Common - Chromosome segregation protein SMC Csal_0697 182 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 92114568 Common - aspartate-semialdehyde dehydrogenase Csal_2450 195 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 92112560 Common rpsC 30S ribosomal protein S3 Csal_0427 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 92114995 Common - Lysine exporter protein (LYSE/YGGA) Csal_2878 94 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92112486 Common - transketolase Csal_0353 221 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 92112435 Common - Beta-ketoadipyl CoA thiolase Csal_0301 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 92112685 Common - secretion protein HlyD Csal_0552 148 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 92113051 Common - Rhodanese-like protein Csal_0923 120 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 92112519 Common - TRAP transporter solute receptor, TAXI family Csal_0386 77 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 92114225 Common - putative GAF sensor protein Csal_2103 81 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 92114303 Common - preprotein translocase, SecA subunit Csal_2181 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 92113855 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_1732 77 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92114576 Common - glucose-methanol-choline oxidoreductase Csal_2458 96 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 92114677 Common - rRNA (guanine-N(2)-)-methyltransferase Csal_2559 78 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 92115194 Common - phosphoglucosamine mutase Csal_3079 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 92113039 Common - histidine triad (HIT) protein Csal_0911 233 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 92112544 Common - ribosomal protein L1 Csal_0411 233 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 92112781 Common - hypothetical protein Csal_0648 15 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 92112386 Common - hypothetical protein Csal_0251 110 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 92113920 Common - Peptidase M20D, amidohydrolase Csal_1797 167 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 92114694 Common - PTSINtr with GAF domain, PtsP Csal_2576 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 92113889 Common - Altronate dehydratase Csal_1766 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 92113899 Nonpathogen - glycosyl transferase, family 9 Csal_1776 2 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 92114490 Common - putative transcriptional regulator Csal_2370 147 COG1733 COG1733, Predicted transcriptional regulators Transcription 92115241 Common - respiratory-chain NADH dehydrogenase, subunit 1 Csal_3126 186 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 92113031 Common - putative monovalent cation/H+ antiporter subunit A Csal_0903 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 92115091 Common - Alcohol dehydrogenase GroES-like protein Csal_2975 208 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92114655 Common - peptidase M4, thermolysin Csal_2537 46 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 92113682 Common mgsA methylglyoxal synthase Csal_1558 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 92113678 Common - transcriptional regulator, LysR family Csal_1554 193 COG0583 LysR, Transcriptional regulator Transcription 92112423 Common - protein of unknown function DUF112, transmembrane Csal_0289 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92113614 Common - sodium:neurotransmitter symporter Csal_1490 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 92113696 Common - Na(+)-translocating NADH-quinone reductase subunit D Csal_1572 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 92112162 Common - Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Csal_0026 124 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 92112258 Common - ABC transporter related Csal_0123 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 92113960 Common - nicotinamide-nucleotide adenylyltransferase Csal_1837 28 COG1056 NadR, Nicotinamide mononucleotide adenylyltransferase Coenzyme metabolism 92112948 Common - BCCT transporter Csal_0820 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92115063 Common - Entericidin EcnAB Csal_2947 3 COG5510 COG5510, Predicted small secreted protein Function unknown 92113173 Common - TonB-dependent siderophore receptor Csal_1045 113 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 92114483 Common - protein of unknown function DUF6, transmembrane Csal_2363 11 None None None 92115295 Common - putative aldolase Csal_3180 147 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 92113795 Common - protein of unknown function DUF21 Csal_1671 215 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 92115423 Common - Putative oxygen-independent coproporphyrinogen III oxidase Csal_3308 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 92114916 Common - Antibiotic biosynthesis monooxygenase Csal_2799 8 COG1359 COG1359, Uncharacterized conserved protein Function unknown 92113548 Common - methyl-accepting chemotaxis sensory transducer Csal_1423 164 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92113531 Nonpathogen - hypothetical protein Csal_1405 1 None None None 92115334 Common - pyridine nucleotide-disulphide oxidoreductase dimerisation region Csal_3219 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 92113722 Common - ribosomal protein L32 Csal_1598 100 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 92113901 Common - Pirin-like protein Csal_1778 145 COG1741 COG1741, Pirin-related protein General function prediction only 92112567 Common - ribosomal protein S14 Csal_0434 205 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 92112276 Common - L-aspartate dehydrogenase Csal_0141 49 COG1712 COG1712, Predicted dinucleotide-utilizing enzyme General function prediction only 92113480 Common - nitroreductase Csal_1354 80 COG0778 NfnB, Nitroreductase Energy production and conversion 92113729 Common - aminodeoxychorismate lyase Csal_1605 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 92114502 Common - Na+/solute symporter Csal_2384 161 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 92114342 Common - ABC transporter related Csal_2220 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 92113881 Common - short-chain dehydrogenase/reductase SDR Csal_1758 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114561 Common - NUDIX hydrolase Csal_2443 45 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 92112285 Common - Serine-type D-Ala-D-Ala carboxypeptidase Csal_0150 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 92114516 Common - ABC transporter related Csal_2398 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 92112593 Common - Cyclopropane-fatty-acyl-phospholipid synthase Csal_0460 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 92114060 Common - transcriptional regulator, ArsR family Csal_1937 61 COG0640 ArsR, Predicted transcriptional regulators Transcription 92114812 Nonpathogen - hypothetical protein Csal_2694 6 None None None 92112530 Common - superoxide dismutase, copper/zinc binding Csal_0397 85 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 92113202 Common - TRAP dicarboxylate transporter- DctM subunit Csal_1074 135 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92113892 Nonpathogen - hypothetical protein Csal_1769 1 None None None 92115211 Common - DNA repair protein RecN Csal_3096 207 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 92115135 Common - phospholipid/glycerol acyltransferase Csal_3020 148 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 92112631 Common - protein of unknown function DUF152 Csal_0498 177 COG1496 COG1496, Uncharacterized conserved protein Function unknown 92112247 Common - hypothetical protein Csal_0112 68 COG2323 COG2323, Predicted membrane protein Function unknown 92114396 Common - hypothetical protein Csal_2275 3 None None None 92113424 Nonpathogen - hypothetical protein Csal_1298 1 None None None 92113749 Common - phospho-2-dehydro-3-heoxyheptonate aldolase Csal_1625 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 92113457 Common - nitrate reductase, beta subunit Csal_1331 148 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 92114925 Common - acetylornithine and succinylornithine aminotransferases Csal_2808 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 92115039 Common - Ion transport protein Csal_2923 39 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 92113666 Common - putative nicotinate-nucleotide adenylyltransferase Csal_1542 174 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 92114216 Common - ABC transporter related Csal_2094 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 92113160 Common - hypothetical protein Csal_1032 3 None None None 92112362 Common - hypothetical protein Csal_0227 18 None None None 92112679 Common - homoserine kinase Csal_0546 69 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 92112207 Nonpathogen - hypothetical protein Csal_0072 3 None None None 92114093 Common - Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase Csal_1970 74 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 92113071 Common - protein of unknown function DUF482 Csal_0943 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 92114554 Common - cell divisionFtsK/SpoIIIE Csal_2436 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 92114189 Common - glycoside hydrolase, family 3-like protein Csal_2067 174 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 92115032 Common - permease YjgP/YjgQ Csal_2916 98 COG0795 COG0795, Predicted permeases General function prediction only 92114087 Common - flagellar biosynthesis protein, FliO Csal_1964 4 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 92115359 Common - transcriptional regulator, LysR family Csal_3244 189 COG0583 LysR, Transcriptional regulator Transcription 92113993 Common - Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein Csal_1870 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 92114720 Common - ABC transporter related Csal_2602 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 92114511 Common fadB multifunctional fatty acid oxidation complex subunit alpha Csal_2393 167 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 92112876 Common - transcriptional regulator, LysR family Csal_0747 167 COG0583 LysR, Transcriptional regulator Transcription 92113524 Common - phage capsid scaffolding Csal_1398 22 None None None 92114664 Common - Glucose-6-phosphate isomerase Csal_2546 173 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 92115362 Common - Integral membrane protein, YccS/YhfK Csal_3247 52 COG1289 COG1289, Predicted membrane protein Function unknown 92114188 Common - MscS Mechanosensitive ion channel Csal_2066 157 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 92112262 Common - transcriptional regulator, LysR family Csal_0127 190 COG0583 LysR, Transcriptional regulator Transcription 92114835 Common - transcriptional regulator, LysR family Csal_2717 172 COG0583 LysR, Transcriptional regulator Transcription 92114702 Common - 3,4-dihydroxy-2-butanone 4-phosphate synthase Csal_2584 226 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 92112780 Common - luciferase-like protein Csal_0647 116 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 92112855 Common - amidohydrolase 2 Csal_0723 41 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 92114203 Common - molybdopterin-guanine dinucleotide biosynthesis protein A Csal_2081 125 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 92115020 Common - hypothetical protein Csal_2903 6 None None None 92114711 Common - putative thiol:disulfide interchange protein Csal_2593 117 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 92112843 Common - protein of unknown function DUF47 Csal_0711 36 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 92114468 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_2348 90 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 92115029 Common - Aldehyde dehydrogenase (NAD+) Csal_2913 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113001 Common - cyclic nucleotide-binding domain (cNMP-BD) protein Csal_0873 69 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 92115325 Common - Na+/H+ antiporter NhaC Csal_3210 77 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 92112953 Common - sulphate transporter Csal_0825 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 92113316 Common - Porphyromonas-type peptidyl-arginine deiminase Csal_1189 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 92114353 Common - magnesium transporter Csal_2231 172 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 92112234 Common - deoxyxylulose-5-phosphate synthase Csal_0099 222 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 92113558 Common - secretion protein HlyD Csal_1433 140 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 92114013 Common - MATE efflux family protein Csal_1890 146 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 92114373 Common - hypothetical protein Csal_2252 8 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 92114822 Common - hypothetical protein Csal_2704 23 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 92114380 Nonpathogen - hypothetical protein Csal_2259 1 None None None 92114022 Common - hypothetical protein Csal_1899 5 None None None 92115148 Common - diguanylate cyclase/phosphodiesterase with GAF sensor Csal_3033 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 92113344 Common - 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Csal_1218 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 92113084 Common - cytochrome c oxidase, subunit III Csal_0956 156 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 92114263 Common - peptidylprolyl isomerase, FKBP-type Csal_2141 127 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 92112706 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Csal_0573 154 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 92113391 Common - Sporulation related Csal_1265 24 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 92112183 Common - Rhodanese-like protein Csal_0047 157 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 92113286 Common - major facilitator superfamily MFS_1 Csal_1159 157 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92112216 Common - hypothetical protein Csal_0081 24 COG3336 COG3336, Predicted membrane protein Function unknown 92114445 Common - phosphoglycolate phosphatase Csal_2324 206 COG0546 Gph, Predicted phosphatases General function prediction only 92112944 Common - hypothetical protein Csal_0816 11 None None None 92114793 Common - Molybdate ABC transporter, ATP-binding protein Csal_2675 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 92113069 Common - nicotinate phosphoribosyltransferase Csal_0941 65 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 92112831 Common - response regulator receiver (CheY-like) and unknown domain protein Csal_0699 68 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 92114324 Common gmhA phosphoheptose isomerase Csal_2202 122 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 92113664 Nonpathogen - hypothetical protein Csal_1540 1 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92114446 Common - NADH dehydrogenase Csal_2325 173 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 92113008 Common - Threonine aldolase Csal_0880 114 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 92115367 Common - 4-hydroxybenzoate polyprenyl transferase Csal_3252 167 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 92114670 Common - Sulfate adenylyltransferase, large subunit Csal_2552 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 92112400 Nonpathogen - hypothetical protein Csal_0266 1 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 92114931 Common - beta-lactamase-like protein Csal_2814 64 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 92113489 Nonpathogen - hypothetical protein Csal_1363 1 None None None 92115127 Common - Tyrosine recombinase XerD Csal_3012 231 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 161897779 Common - glycolate oxidase subunit GlcD Csal_2687 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 92113095 Nonpathogen - hypothetical protein Csal_0967 1 None None None 92112367 Common - CRISPR-associated protein Cas1 Csal_0232 45 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 92113408 Common - Adenylosuccinate synthase Csal_1282 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 92113479 Common queF 7-cyano-7-deazaguanine reductase Csal_1353 92 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 92114241 Common - protein of unknown function UPF0131 Csal_2119 21 COG2105 COG2105, Uncharacterized conserved protein Function unknown 92113859 Common - Alcohol dehydrogenase GroES-like protein Csal_1736 195 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92112495 Common - inner-membrane translocator Csal_0362 112 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 92114332 Common - protein of unknown function DUF34 Csal_2210 104 COG0327 COG0327, Uncharacterized conserved protein Function unknown 92113706 Common - Lipoprotein releasing system, transmembrane protein, LolC/E family Csal_1582 171 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 92113812 Common - hypothetical protein Csal_1689 9 None None None 92114103 Common - anti-sigma-28 factor, FlgM Csal_1980 17 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 92114725 Common - transcriptional regulator, AraC family Csal_2607 146 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 92112928 Common - diguanylate cyclase/phosphodiesterase with GAF sensor Csal_0800 188 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 92114727 Common - Alcohol dehydrogenase, zinc-binding Csal_2609 204 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92115014 Common - phosphoribosylaminoimidazole carboxylase, catalytic subunit Csal_2897 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 92113499 Common - phage P2 GpU Csal_1373 30 COG3499 COG3499, Phage protein U General function prediction only 92115274 Common - Mg chelatase-related protein Csal_3159 196 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 92114832 Common - N-acetyl-gamma-glutamyl-phosphate reductase Csal_2714 214 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 92112238 Common - heavy metal sensor signal transduction histidine kinase Csal_0103 203 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92112321 Common - protein of unknown function DUF6, transmembrane Csal_0186 25 None None None 92113324 Common - FAD dependent oxidoreductase Csal_1197 124 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92113694 Common - Na(+)-translocating NADH-quinone reductase subunit B Csal_1570 76 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 92115408 Common - Cobyrinic acid a,c-diamide synthase Csal_3293 224 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 92114249 Common - Argininosuccinate synthase Csal_2127 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 92115286 Common - Taurine catabolism dioxygenase TauD/TfdA Csal_3171 8 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 92113478 Common - ABC-2 Csal_1352 177 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 92113090 Common - lipid A biosynthesis acyltransferase Csal_0962 115 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 92113970 Common - Holliday junction DNA helicase RuvA Csal_1847 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 92113110 Common - L-serine dehydratase 1 Csal_0982 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 92113506 Nonpathogen - hypothetical protein Csal_1380 1 None None None 92114455 Common - tRNA-i(6)A37 modification enzyme MiaB Csal_2334 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 92114163 Common - protein of unknown function UPF0153 Csal_2041 37 None None None 92112243 Common - small multidrug resistance protein Csal_0108 6 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 92115301 Common - protein of unknown function DUF892 Csal_3186 37 COG3685 COG3685, Uncharacterized protein conserved in bacteria Function unknown 92115000 Common - hypothetical protein Csal_2883 9 None None None 92113712 Common - protein of unknown function DUF343 Csal_1588 95 COG2835 COG2835, Uncharacterized conserved protein Function unknown 92114635 Common - 2-dehydro-3-deoxyglucarate aldolase Csal_2517 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 92114043 Common - MoeA-like protein Csal_1920 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 92112993 Common - Acetate--CoA ligase Csal_0865 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 92112223 Common - hypothetical protein Csal_0088 110 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 92114412 Common - succinic semialdehyde dehydrogenase Csal_2291 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92114686 Common - transcriptional regulator-like protein Csal_2568 25 COG2378 COG2378, Predicted transcriptional regulator Transcription 92113765 Common - benzoate transporter Csal_1641 62 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 92114668 Common - sulfatase Csal_2550 35 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 92112796 Common - protein of unknown function DUF1338 Csal_0664 23 COG5383 COG5383, Uncharacterized protein conserved in bacteria Function unknown 92112445 Common - Protocatechuate 3,4-dioxygenase, beta subunit Csal_0311 49 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 92113794 Common - Benzoate membrane transport protein Csal_1670 18 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 92112686 Common - Drug resistance transporter EmrB/QacA subfamily Csal_0553 205 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113986 Common - surface antigen (D15) Csal_1863 133 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 92114601 Common - TRAP dicarboxylate transporter- DctM subunit Csal_2483 123 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 92115273 Common - hypothetical protein Csal_3158 16 None None None 92114017 Nonpathogen - hypothetical protein Csal_1894 1 COG2105 COG2105, Uncharacterized conserved protein Function unknown 92113037 Common - phosphoribosylamine--glycine ligase Csal_0909 233 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 92112676 Common - fumarylacetoacetate (FAA) hydrolase Csal_0543 178 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 92114613 Common - protein of unknown function UPF0061 Csal_2495 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 92113433 Common ppnK inorganic polyphosphate/ATP-NAD kinase Csal_1307 239 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 92113865 Common - Chromate transporter Csal_1742 102 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 92112553 Common - ribosomal protein S10 Csal_0420 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 92114970 Common - transcriptional regulator, XRE family Csal_2853 89 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 92113563 Common - acriflavin resistance protein Csal_1439 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 92112756 Common - recA protein Csal_0623 219 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 92113496 Common - putative prophage repressor Csal_1370 125 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 92113810 Common - Sulfate adenylyltransferase, large subunit Csal_1687 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 92112204 Common - transcriptional regulator, GntR family Csal_0069 109 COG1802 GntR, Transcriptional regulators Transcription 92114855 Common - binding-protein-dependent transport systems inner membrane component Csal_2737 153 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 92115151 Common - aminotransferase, class I and II Csal_3036 232 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 92113564 Common - secretion protein HlyD Csal_1440 168 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 92114260 Common - GCN5-related N-acetyltransferase Csal_2138 19 None None None 92113027 Common - multiple resistance and pH regulation protein F Csal_0899 84 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 92115252 Common - hypothetical protein Csal_3137 12 COG5589 COG5589, Uncharacterized conserved protein Function unknown 92112393 Common - extracellular solute-binding protein, family 1 Csal_0258 96 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92113401 Common mutL DNA mismatch repair protein Csal_1275 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 92113736 Common - Electron-transferring-flavoprotein dehydrogenase Csal_1612 114 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 92112967 Common - CMP/dCMP deaminase, zinc-binding Csal_0839 199 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 92113417 Nonpathogen - hypothetical protein Csal_1291 1 None None None 92114154 Common - flagellar protein FliS Csal_2032 74 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 92114230 Common fumC fumarate hydratase Csal_2108 227 COG0114 FumC, Fumarase Energy production and conversion 92114986 Common - sun protein Csal_2869 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 92113199 Nonpathogen - hypothetical protein Csal_1071 2 None None None 92112633 Common - Sugar transporter Csal_0500 150 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113258 Common - major facilitator superfamily MFS_1 Csal_1131 90 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 92112407 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Csal_0273 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 92113831 Common - Peptidase M20D, amidohydrolase Csal_1708 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 92113631 Nonpathogen - hypothetical protein Csal_1507 1 None None None 92113575 Common - two component transcriptional regulator, winged helix family Csal_1451 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92114558 Common - ATPase AAA-2 Csal_2440 227 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 92113291 Common - Methyltransferase type 11 Csal_1164 186 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 92112643 Common - DNA repair protein RadA Csal_0510 203 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 92114000 Common - diaminobutyrate--2-oxoglutarate aminotransferase Csal_1877 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 92113370 Common - OmpW Csal_1244 63 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 92113641 Common - Substrate-binding region of ABC-type glycine betaine transport system Csal_1517 66 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 92114119 Common - DNA-binding transcriptional regulator CsiR Csal_1997 121 COG1802 GntR, Transcriptional regulators Transcription 92113510 Common - Phage-related tail fibre protein-like protein Csal_1384 24 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 92115042 Common - Glutamate-ammonia-ligase adenylyltransferase Csal_2926 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 92112794 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0662 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92113325 Common - FAD dependent oxidoreductase Csal_1198 128 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92112339 Common - Rhs element Vgr protein Csal_0204 59 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 92112816 Common - methyladenine glycosylase Csal_0684 130 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 92113260 Common - nitrate transporter, putative Csal_1133 80 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 92114977 Common - protein of unknown function DUF815 Csal_2860 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 92112503 Common - fructose-1,6-bisphosphate aldolase Csal_0370 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 92115264 Common - protein of unknown function DUF423 Csal_3149 71 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 92113856 Common - TRAP dicarboxylate transporter, DctP subunit Csal_1733 103 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92112696 Common - ribosomal protein S2 Csal_0563 221 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 92112987 Common - undecaprenyl pyrophosphate phosphatase Csal_0859 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 92115242 Common - NADH-quinone oxidoreductase, chain G Csal_3127 180 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 92113681 Common - putative poly(3-hydroxyalkanoate) synthetase Csal_1557 23 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 92115164 Nonpathogen - hypothetical protein Csal_3049 1 None None None 92114693 Common - protein of unknown function DUF833 Csal_2575 48 COG3332 COG3332, Uncharacterized conserved protein Function unknown 92115234 Common - Endonuclease/exonuclease/phosphatase Csal_3119 18 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 92112317 Common - binding-protein-dependent transport systems inner membrane component Csal_0182 121 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 92114942 Common - Glutathione peroxidase Csal_2825 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 92114250 Common - ribonuclease T Csal_2128 67 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 92114744 Common - putative ABC transporter ATP-binding protein Csal_2626 245 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 92114121 Common - ABC transporter related Csal_1999 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 92112878 Common - major facilitator superfamily MFS_1 Csal_0749 104 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92113129 Common - sarcosine oxidase, gamma subunit family Csal_1001 26 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 92114293 Common - cation transporter Csal_2171 123 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 92113085 Common - cytochrome C oxidase subunit IV Csal_0957 61 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 92113104 Common - sigma 70 (RpoD) Csal_0976 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 92112305 Common - Pyrrolo-quinoline quinone Csal_0170 61 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 92112882 Common - GntR-like protein Csal_0753 136 COG2186 FadR, Transcriptional regulators Transcription 92113230 Nonpathogen - hypothetical protein Csal_1103 1 None None None 92114269 Common - 2-dehydropantoate 2-reductase Csal_2147 102 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 92113307 Common - transcriptional regulator, LuxR family Csal_1180 37 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92113634 Common fadE acyl-CoA dehydrogenase Csal_1510 147 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 92113622 Common - Helicase c2 Csal_1498 45 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 92114300 Common - protein of unknown function DUF329 Csal_2178 61 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 92113492 Nonpathogen - hypothetical protein Csal_1366 2 None None None 92113517 Common - hypothetical protein Csal_1391 8 None None None 92114784 Nonpathogen - hypothetical protein Csal_2666 1 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 92112158 Common - protein of unknown function DUF710 Csal_0022 56 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 92114836 Common - Exopolysaccharide synthesis, ExoD Csal_2718 20 COG3932 COG3932, Uncharacterized ABC-type transport system, permease components General function prediction only 92115384 Common - thioesterase superfamily Csal_3269 86 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 92114928 Common - GCN5-related N-acetyltransferase Csal_2811 22 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 92112998 Common - hypothetical protein Csal_0870 10 None None None 92112358 Common - choline transport protein BetT Csal_0223 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92113333 Nonpathogen - hypothetical protein Csal_1207 1 None None None 92114647 Common - Phosphatidylserine decarboxylase Csal_2529 96 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 92112866 Nonpathogen - hypothetical protein Csal_0734 1 None None None 92115100 Common - acetylglutamate kinase Csal_2984 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 92114213 Common - binding-protein-dependent transport systems inner membrane component Csal_2091 156 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 92113123 Common - Alcohol dehydrogenase GroES-like protein Csal_0995 191 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92114609 Common - NAD(P) transhydrogenase, beta subunit Csal_2491 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 92114910 Common - extracellular solute-binding protein, family 3 Csal_2793 167 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92113101 Common - metalloendopeptidase, putative, glycoprotease family Csal_0973 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 92114597 Common - TRAP dicarboxylate transporter, DctP subunit Csal_2479 108 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92114778 Common - HAD-superfamily hydrolase subfamily IA, variant 3 Csal_2660 46 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 92113449 Common - hypothetical protein Csal_1323 3 None None None 92112483 Common - protein of unknown function UPF0126 Csal_0350 133 COG2860 COG2860, Predicted membrane protein Function unknown 92113328 Common - RNA-directed DNA polymerase (Reverse transcriptase) Csal_1202 40 None None None 92114385 Common - protein of unknown function DUF876 Csal_2264 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 92113752 Common - Peptidase S1C, Do Csal_1628 225 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 92114174 Common - glutaminyl-tRNA synthetase Csal_2052 238 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 92113410 Common - hypothetical protein Csal_1284 6 None None None 92112453 Common - Pyridoxal-5'-phosphate-dependent enzyme, beta subunit Csal_0320 196 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 92112668 Common - ABC transporter related Csal_0535 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 92114237 Common - ParA family protein Csal_2115 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 92114546 Common cysB transcriptional regulator CysB Csal_2428 188 COG0583 LysR, Transcriptional regulator Transcription 92112871 Nonpathogen - hypothetical protein Csal_0742 1 None None None 92113180 Common - sigma-24 (FecI-like) Csal_1052 79 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 92114279 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase Csal_2157 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114587 Common - Patatin Csal_2469 127 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 92114956 Common - nucleoside recognition Csal_2839 20 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 92115056 Common - hypothetical protein Csal_2940 9 None None None 92112378 Common - glutamine synthetase, type I Csal_0243 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 92113237 Common - PhoH-like protein Csal_1110 199 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 92112371 Common - HAD-superfamily hydrolase subfamily IIB Csal_0236 91 COG1877 OtsB, Trehalose-6-phosphatase Carbohydrate transport and metabolism 92112724 Common - Sec-independent protein translocase TatC Csal_0591 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 92113189 Common - hypothetical protein Csal_1061 26 COG3915 COG3915, Uncharacterized protein conserved in bacteria Function unknown 92113716 Common - ribonuclease, Rne/Rng family Csal_1592 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 92113215 Common - hypothetical protein Csal_1088 11 COG3403 COG3403, Uncharacterized conserved protein Function unknown 92112854 Common - transcriptional regulator, GntR family Csal_0722 115 COG2188 PhnF, Transcriptional regulators Transcription 92113269 Common - dihydroxy-acid dehydratase Csal_1142 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 92114046 Common - putative uncharacterized protein involved in oxidation of intracellular sulfur Csal_1923 18 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 92115015 Common - phosphoribosylaminoimidazole carboxylase ATPase subunit Csal_2898 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 92113903 Common - Pirin-like protein Csal_1780 148 COG1741 COG1741, Pirin-related protein General function prediction only 92113168 Common - Sucraseferredoxin-like protein Csal_1040 18 COG4759 COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain Posttranslational modification, protein turnover, chaperones 92115248 Common - Phosphomethylpyrimidine kinase Csal_3133 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 92114282 Common - chaperonin GroEL Csal_2160 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 92113900 Common - Antibiotic biosynthesis monooxygenase Csal_1777 20 COG3224 COG3224, Uncharacterized protein conserved in bacteria Function unknown 92114372 Common - hypothetical protein Csal_2251 8 None None None 92115122 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Csal_3007 21 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 92112733 Common - ATP-dependent protease peptidase subunit Csal_0600 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 92112603 Common - putative thiol:disulfide interchange protein Csal_0470 17 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 92113846 Common - diguanylate cyclase with PAS/PAC sensor Csal_1723 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 92114108 Common - flagellin-like protein Csal_1985 120 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 92114164 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Csal_2042 141 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 92112310 Common - protein of unknown function DUF6, transmembrane Csal_0175 100 COG2962 RarD, Predicted permeases General function prediction only 92114112 Nonpathogen - hypothetical protein Csal_1990 1 None None None 92112803 Common - transcriptional regulator, LysR family Csal_0671 187 COG0583 LysR, Transcriptional regulator Transcription 92114524 Common - periplasmic sensor signal transduction histidine kinase Csal_2406 209 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 92112219 Common - N-6 DNA methylase Csal_0084 159 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 92112241 Common - transcriptional regulator, TetR family Csal_0106 85 COG1309 AcrR, Transcriptional regulator Transcription 92115117 Common - ABC transporter related Csal_3002 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 92114535 Common - periplasmic sensor signal transduction histidine kinase Csal_2417 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92114879 Nonpathogen - hypothetical protein Csal_2761 1 None None None 92114849 Common - Succinylglutamate desuccinylase/aspartoacylase Csal_2731 51 COG3608 COG3608, Predicted deacylase General function prediction only 92113355 Common - UspA Csal_1229 132 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 92112184 Common - protein-export protein SecB Csal_0048 108 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 92112297 Common - transcriptional regulator, LysR family Csal_0162 185 COG0583 LysR, Transcriptional regulator Transcription 92113826 Common - protein tyrosine phosphatase Csal_1703 85 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 92113068 Common - dienelactone hydrolase Csal_0940 108 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 92113939 Common - phosphoesterase, PA-phosphatase related Csal_1816 39 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 92113806 Nonpathogen - lipopolysaccharide biosynthesis Csal_1683 2 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 92115238 Common - NADH dehydrogenase subunit K Csal_3123 166 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 92113744 Common - hypothetical protein Csal_1620 9 None None None 92114128 Common - K+-dependent Na+/Ca+ exchanger related-protein Csal_2006 113 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 92112290 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_0155 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 92112351 Common - Fusaric acid resistance protein conserved region Csal_0216 44 COG1289 COG1289, Predicted membrane protein Function unknown 92114421 Common - protein of unknown function DUF1206 Csal_2300 25 None None None 92115364 Common - histone-like DNA-binding protein Csal_3249 211 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 92113007 Common - NADH:flavin oxidoreductase/NADH oxidase Csal_0879 198 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 92114009 Common - phage integrase Csal_1886 79 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 92113418 Nonpathogen - hypothetical protein Csal_1292 1 None None None 92114512 Common - hypothetical protein Csal_2394 10 COG4129 COG4129, Predicted membrane protein Function unknown 92114827 Common - Na+/H+ antiporter NhaC Csal_2709 59 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 92113670 Common - Rod shape-determining protein RodA Csal_1546 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 92114706 Common - alpha amylase Csal_2588 131 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 92115291 Common - NAD-dependent epimerase/dehydratase Csal_3176 216 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92112906 Common - FAD dependent oxidoreductase Csal_0778 106 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 92114394 Common - ATPase AAA-2 Csal_2273 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 92113440 Common - hypothetical protein Csal_1314 119 COG2353 COG2353, Uncharacterized conserved protein Function unknown 92113962 Common - acylphosphatase Csal_1839 130 COG1254 AcyP, Acylphosphatases Energy production and conversion 92115376 Common - zinc/iron permease Csal_3261 101 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 92114406 Common - acetyl-CoA carboxylase, biotin carboxylase Csal_2285 231 COG0439 AccC, Biotin carboxylase Lipid metabolism 92115072 Common - hypothetical protein Csal_2956 20 COG4850 COG4850, Uncharacterized conserved protein Function unknown 92112740 Common - Penicillin-binding protein 1A Csal_0607 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 92113228 Common - transcriptional regulator, GntR family Csal_1101 185 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 92112651 Common - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Csal_0518 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 92115089 Common - transcriptional regulator, GntR family Csal_2973 131 COG1802 GntR, Transcriptional regulators Transcription 92114938 Common - transcriptional regulator, AraC family Csal_2821 84 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 92112252 Common - putative thiol-disulphide oxidoreductase DCC Csal_0117 16 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 92114491 Common - short-chain dehydrogenase/reductase SDR Csal_2371 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113020 Common - replicative DNA helicase Csal_0892 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 92115110 Common - BolA-like protein Csal_2994 93 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 92112886 Common - ribose-5-phosphate isomerase B Csal_0757 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 92112728 Common - 2-polyprenylphenol 6-hydroxylase Csal_0595 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 92113244 Common - Nitrite reductase (NAD(P)H) large subunit, NirB Csal_1117 189 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 92114794 Common - Molybdate ABC transporter, permease protein Csal_2676 182 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 92115412 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_3297 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 92113386 Common - Phosphoribosylanthranilate isomerase Csal_1260 190 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 92114357 Common - hypothetical protein Csal_2235 56 COG3164 COG3164, Predicted membrane protein Function unknown 92114333 Common - peptidase S1 and S6, chymotrypsin/Hap Csal_2211 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 92114270 Nonpathogen - hypothetical protein Csal_2148 1 None None None 92113154 Common - TRAP dicarboxylate transporter- DctP subunit Csal_1026 65 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92112976 Common - pyrroloquinoline quinone biosynthesis protein PqqE Csal_0848 142 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 92113953 Common - glycine cleavage T protein (aminomethyl transferase) Csal_1830 115 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 92114415 Common - GTP cyclohydrolase I Csal_2294 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 92115138 Common - peptidase M16-like protein Csal_3023 196 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 92112811 Common - Glutamate--ammonia ligase Csal_0679 220 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 92112141 Common - Histidinol-phosphate phosphatase Csal_0005 128 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 92113019 Common - ribosomal protein L9 Csal_0891 209 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 92113423 Common - peptidylprolyl isomerase, FKBP-type Csal_1297 127 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 92113190 Common - Hpt sensor hybrid histidine kinase Csal_1062 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92112619 Common - methylation Csal_0486 12 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 92114470 Nonpathogen - hypothetical protein Csal_2350 1 None None None 92114949 Common - S-adenosylmethionine Csal_2832 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 92113928 Common - integration host factor, alpha subunit Csal_1805 211 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 92113994 Common - binding-protein-dependent transport systems inner membrane component Csal_1871 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 92112896 Common - transcriptional regulator, LacI family Csal_0768 128 COG1609 PurR, Transcriptional regulators Transcription 92112466 Common - hypothetical protein Csal_0333 12 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92112430 Common - transcriptional regulator, IclR family Csal_0296 108 COG1414 IclR, Transcriptional regulator Transcription 92112626 Common - methylation Csal_0493 14 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 92113471 Nonpathogen - hypothetical protein Csal_1345 1 None None None 92115061 Common - ABC transporter related Csal_2945 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 92113505 Common - phage tail sheath protein Csal_1379 36 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 92115328 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_3213 56 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92113612 Common - K+ transporter Trk Csal_1488 85 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 92115170 Common - pyrroline-5-carboxylate reductase Csal_3055 214 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 92114624 Common - Cytosine deaminase Csal_2506 204 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 92115293 Common - 3-hydroxyisobutyrate dehydrogenase Csal_3178 162 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 92113280 Common - GCN5-related N-acetyltransferase Csal_1153 19 COG0456 RimI, Acetyltransferases General function prediction only 92112328 Common ampC beta-lactamase Csal_0193 43 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 92112849 Common - two component, sigma54 specific, transcriptional regulator, Fis family Csal_0717 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92112954 Common - carbonic anhydrase Csal_0826 147 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 92113063 Common - glucokinase Csal_0935 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 92112341 Common - hypothetical protein Csal_0206 5 COG0628 PerM, Predicted permease General function prediction only 92113836 Common - Protein-tyrosine kinase Csal_1713 146 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 92114202 Common - molybdopterin-guanine dinucleotide biosynthesis protein B Csal_2080 97 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 92113552 Common - transcriptional regulatory protein, MerR family Csal_1427 11 None None None 92115345 Common - Phosphoglycerate mutase Csal_3230 27 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 92113875 Common - Malate/L-lactate dehydrogenase Csal_1752 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 92115177 Common - response regulator receiver domain protein (CheY-like) Csal_3062 184 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92113692 Common - glyceraldehyde-3-phosphate dehydrogenase Csal_1568 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 92112864 Common - CMP/dCMP deaminase, zinc-binding Csal_0732 48 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 92115314 Common - transcriptional regulator, GntR family Csal_3199 143 COG1802 GntR, Transcriptional regulators Transcription 92113175 Common - peptidase S58, DmpA Csal_1047 37 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92113700 Common - hypothetical protein Csal_1576 7 COG2991 COG2991, Uncharacterized protein conserved in bacteria Function unknown 92115035 Common - branched-chain amino acid aminotransferase Csal_2919 203 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 92112270 Common - Glyoxalase/bleomycin resistance protein/dioxygenase Csal_0135 35 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 92112413 Common - transcriptional regulator, MarR family Csal_0279 79 COG1846 MarR, Transcriptional regulators Transcription 92114459 Common lnt apolipoprotein N-acyltransferase Csal_2338 168 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 92113148 Common araG L-arabinose transporter ATP-binding protein Csal_1020 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 92112562 Common - ribosomal protein L29 Csal_0429 112 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 92113917 Common - LrgB-like protein Csal_1794 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 92114651 Common - hypothetical protein Csal_2533 13 None None None 92112222 Common - type III restriction enzyme, res subunit Csal_0087 110 COG4096 HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 92114136 Common - GTP-binding signal recognition particle SRP54, G-protein Csal_2014 117 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 92114700 Common - NusB antitermination factor Csal_2582 145 COG0781 NusB, Transcription termination factor Transcription 92114633 Common - 2-isopropylmalate synthase Csal_2515 210 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 92113093 Common - Methyltransferase type 11 Csal_0965 25 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 92115136 Common - putative transcriptional regulator, TetR family Csal_3021 20 COG1309 AcrR, Transcriptional regulator Transcription 92114723 Common - 2-dehydro-3-deoxygalactonokinase Csal_2605 40 COG3734 DgoK, 2-keto-3-deoxy-galactonokinase Carbohydrate transport and metabolism 92112894 Common - Xylose isomerase-like protein Csal_0766 68 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 92115307 Common - NAD-dependent epimerase/dehydratase Csal_3192 163 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92114705 Common - Transglycosylase-associated protein Csal_2587 14 COG2261 COG2261, Predicted membrane protein Function unknown 92114331 Common - protein of unknown function DUF1043 Csal_2209 20 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 92112381 Common - nitrogen metabolism transcriptional regulator, NtrC, Fis Family Csal_0246 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92114277 Common - orotidine 5'-phosphate decarboxylase Csal_2155 159 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 92115006 Common - hypothetical protein Csal_2889 11 COG5607 COG5607, Uncharacterized conserved protein Function unknown 92113470 Common - putative RNA methylase Csal_1344 159 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 92113000 Common - hypothetical protein Csal_0872 53 COG4327 COG4327, Predicted membrane protein Function unknown 92112364 Common - CRISPR-associated protein, CT1975 Csal_0229 42 None None None 92112991 Common - YgfB and YecA Csal_0863 12 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 92114776 Common - Hsp33 protein Csal_2658 138 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 92112956 Common - purine nucleoside phosphorylase Csal_0828 97 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 92112511 Common - nrdI protein Csal_0378 34 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 92113585 Common - ribonuclease D Csal_1461 118 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 92113057 Nonpathogen - hypothetical protein Csal_0929 1 None None None 92115218 Nonpathogen - hypothetical protein Csal_3103 1 None None None 92112474 Common - TRAP transporter, 4TM/12TM fusion protein Csal_0341 83 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 92115185 Common - polynucleotide phosphorylase/polyadenylase Csal_3070 246 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 92114015 Common - Uncharacterised conserved protein UCP030820 Csal_1892 54 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 92114737 Common - ABC transporter related Csal_2619 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 92112456 Common - Protocatechuate 4,5-dioxygenase Csal_0323 29 COG3384 COG3384, Uncharacterized conserved protein Function unknown 92115229 Common - protein of unknown function DUF484 Csal_3114 44 COG3159 COG3159, Uncharacterized protein conserved in bacteria Function unknown 92113066 Nonpathogen - hypothetical protein Csal_0938 1 None None None 92114147 Common - OmpA/MotB Csal_2025 108 COG1360 MotB, Flagellar motor protein Cell motility and secretion 92115186 Common - ribosomal protein S15 Csal_3071 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 92112193 Common - protein of unknown function DUF179 Csal_0058 125 COG1678 COG1678, Putative transcriptional regulator Transcription 92114450 Common - Gamma-glutamyltransferase Csal_2329 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 92115283 Common - putative transposase, IS891/IS1136/IS1341 Csal_3168 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 92112498 Common - GntR-like protein Csal_0365 135 COG2186 FadR, Transcriptional regulators Transcription 92112537 Common lldD L-lactate dehydrogenase Csal_0404 128 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 92114904 Common - hypothetical protein Csal_2786 16 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 92115145 Common - two component transcriptional regulator, LuxR family Csal_3030 174 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92112786 Common - choline/carnitine/betaine transport Csal_0654 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92113459 Common - respiratory nitrate reductase, gamma subunit Csal_1333 59 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 92112763 Common - two component transcriptional regulator, winged helix family Csal_0630 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92114212 Common - hypothetical protein Csal_2090 26 COG5477 COG5477, Predicted small integral membrane protein Function unknown 92113363 Common - protein of unknown function DUF59 Csal_1237 135 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 92114243 Common - electron transport complex, RnfABCDGE type, B subunit Csal_2121 100 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 92115070 Common - protein of unknown function DUF195 Csal_2954 141 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 92114528 Nonpathogen - hypothetical protein Csal_2410 3 None None None 92114869 Common - AMP-binding enzyme family protein Csal_2751 64 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 92115124 Common - threonine synthase Csal_3009 130 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 92112841 Common - Ion transport protein Csal_0709 110 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 92112683 Common - ABC transporter related Csal_0550 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 92114714 Common - two component transcriptional regulator, winged helix family Csal_2596 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 92112852 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_0720 78 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92112822 Common - phosphoesterase, PA-phosphatase related Csal_0690 14 None None None 92112609 Common obgE GTPase ObgE Csal_0476 249 COG0536 Obg, Predicted GTPase General function prediction only 92113803 Common - Selenocysteine lyase-like protein Csal_1680 15 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 92115027 Common - beta-ketoacyl synthase Csal_2911 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92114314 Common - UDP-N-acetylmuramoylalanine--D-glutamate ligase Csal_2192 209 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 92114671 Common - Sulfate adenylyltransferase, small subunit Csal_2553 139 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 92114209 Common - transcriptional regulator, XRE family with cupin sensor protein Csal_2087 115 COG1396 HipB, Predicted transcriptional regulators Transcription 92115393 Common - short-chain dehydrogenase/reductase SDR Csal_3278 129 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92113048 Common - dimethyladenosine transferase Csal_0920 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 92114814 Common - sulfite reductase (NADPH) flavoprotein, alpha chain Csal_2696 101 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 92114510 Common fadA 3-ketoacyl-CoA thiolase Csal_2392 174 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 92112610 Common - gamma-glutamyl kinase Csal_0477 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 92114626 Common - YCII-related Csal_2508 38 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 92113029 Common - putative monovalent cation/H+ antiporter subunit D Csal_0901 195 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 92112586 Common - Senescence marker protein-30 (SMP-30) Csal_0453 81 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 92115321 Common - ribonuclease PH Csal_3206 193 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 92114089 Common - flagellar biosynthetic protein FliQ Csal_1966 129 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 92114284 Common - protein of unknown function DUF125, transmembrane Csal_2162 53 COG1814 COG1814, Uncharacterized membrane protein Function unknown 92115079 Common - Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) Csal_2963 201 COG0281 SfcA, Malic enzyme Energy production and conversion 92112343 Common - putative regulator protein Csal_0208 81 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 92112694 Common glnD PII uridylyl-transferase Csal_0561 124 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 92114219 Common - xanthine-guanine phosphoribosyltransferase Csal_2097 74 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 92113804 Common - lipopolysaccharide biosynthesis Csal_1681 3 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 92112546 Common - ribosomal protein L7/L12 Csal_0413 215 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 161897778 Common - tryptophanyl-tRNA synthetase Csal_2965 225 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92112236 Common - Transthyretin Csal_0101 63 COG2351 COG2351, Transthyretin-like protein General function prediction only 92114434 Common - putative urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic protein precursor Csal_2313 96 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 92113119 Common - protein of unknown function DUF224, cysteine-rich region Csal_0991 86 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 92112599 Common - transcriptional regulator, MerR family Csal_0466 59 COG0789 SoxR, Predicted transcriptional regulators Transcription 92114338 Nonpathogen - anti-sigma-factor antagonist (STAS) domain protein Csal_2216 1 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 92112535 Nonpathogen - hypothetical protein Csal_0402 13 None None None 92114079 Common - flagellar motor switch protein FliG Csal_1956 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 92113784 Common - type II secretion system protein Csal_1660 16 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 92114322 Common - LppC putative lipoprotein Csal_2200 46 COG3107 LppC, Putative lipoprotein General function prediction only 92112267 Common - Rieske (2Fe-2S) protein Csal_0132 78 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 92113797 Common - Nucleotidyltransferase substrate binding protein, HI0074 Csal_1673 32 None None None 92112282 Common - NAD(P)H dehydrogenase (quinone) Csal_0147 93 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 92112569 Common - ribosomal protein L6 Csal_0436 229 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 92113688 Nonpathogen - hypothetical protein Csal_1564 1 None None None 92112493 Common - hypothetical protein Csal_0360 8 COG5618 COG5618, Predicted periplasmic lipoprotein General function prediction only 92113672 Common - rare lipoprotein A Csal_1548 136 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 92113305 Nonpathogen - putative dehydrogenase Csal_1178 19 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 92114824 Common - dihydrodipicolinate synthetase Csal_2706 100 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 92115102 Common - RNA polymerase factor sigma-32 Csal_2986 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 92113591 Common - cysteine synthase A Csal_1467 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 92113874 Common - 6-phosphogluconate dehydrogenase, NAD-binding Csal_1751 185 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 92115203 Common - hypothetical protein Csal_3088 15 COG3553 COG3553, Uncharacterized protein conserved in bacteria Function unknown 92113883 Common - NAD-dependent epimerase/dehydratase Csal_1760 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 92114497 Nonpathogen - hypothetical protein Csal_2379 4 None None None 92112287 Common - Amidase Csal_0152 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 92113152 Common - TRAP dicarboxylate transporter- DctM subunit Csal_1024 126 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92112926 Common - protein of unknown function DUF306, Meta and HslJ Csal_0798 35 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 92112570 Common - ribosomal protein L18 Csal_0437 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 92114657 Common - TonB-dependent siderophore receptor Csal_2539 109 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 92113468 Common - Dihydroorotate oxidase Csal_1342 229 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 92114255 Common uvrC excinuclease ABC subunit C Csal_2133 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 92115044 Nonpathogen - hypothetical protein Csal_2928 1 None None None 92114755 Common - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Csal_2637 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 92112151 Common - 3-deoxy-D-manno-octulosonic-acid kinase Csal_0015 23 COG0478 COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain Signal transduction mechanisms 92114544 Common - ABC transporter related Csal_2426 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 92114489 Common - Cobyrinic acid a,c-diamide synthase Csal_2369 199 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 92112709 Common - lipid-A-disaccharide synthase Csal_0576 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 92113542 Common - transcriptional regulator, LysR family Csal_1417 187 COG0583 LysR, Transcriptional regulator Transcription 92114365 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B Csal_2243 212 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 92112481 Common - aldehyde dehydrogenase Csal_0348 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92114595 Common - TRAP dicarboxylate transporter- DctM subunit Csal_2477 135 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92112909 Common - L-sorbosone dehydrogenase Csal_0781 61 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 92112167 Common - Amidase, hydantoinase/carbamoylase Csal_0031 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 92112488 Common - Dihydroxyacetone kinase, subunit L Csal_0355 75 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 92113551 Common - Alcohol dehydrogenase GroES-like protein Csal_1426 192 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 92115157 Common - Alcohol dehydrogenase, zinc-binding Csal_3042 167 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 92112171 Common - protein of unknown function DUF523 Csal_0035 63 COG1683 COG1683, Uncharacterized conserved protein Function unknown 92114566 Common - GCN5-related N-acetyltransferase Csal_2448 74 COG2153 ElaA, Predicted acyltransferase General function prediction only 92114919 Common - major facilitator superfamily MFS_1 Csal_2802 74 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 92114262 Common - diguanylate cyclase/phosphodiesterase with GAF sensor Csal_2140 165 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 92112229 Common - TonB-dependent receptor Csal_0094 114 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 92112437 Common - TRAP dicarboxylate transporter- DctP subunit Csal_0303 106 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92113975 Common - TonB-like protein Csal_1852 14 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 92114067 Common - Hydroxyacylglutathione hydrolase Csal_1944 177 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 92113607 Nonpathogen - transcriptional regulator, ArsR family Csal_1483 2 COG0640 ArsR, Predicted transcriptional regulators Transcription 92113709 Common - DNA internalization-related competence protein ComEC/Rec2 Csal_1585 159 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 92113926 Common pheS phenylalanyl-tRNA synthetase subunit alpha Csal_1803 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 92112942 Common - Cupin 2 protein Csal_0814 17 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 92114348 Common - sigma-54 RpoN Csal_2226 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 92113311 Common - Na+/H+ antiporter NhaC Csal_1184 48 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 92113415 Common - 4-aminobutyrate aminotransferase Csal_1289 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 92113135 Common - hypothetical protein Csal_1007 17 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 92113405 Common - HflK protein Csal_1279 180 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 92112996 Common - NRAMP family Mn2+/Fe2+ transporters Csal_0868 102 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 92112330 Common - plasmid stabilization system Csal_0195 30 COG3668 ParE, Plasmid stabilization system protein General function prediction only 92112551 Common - translation elongation factor G Csal_0418 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 92114929 Common - protein of unknown function UPF0066 Csal_2812 97 COG1720 COG1720, Uncharacterized conserved protein Function unknown 92114896 Common - methyl-accepting chemotaxis sensory transducer Csal_2778 154 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92112388 Common - hypothetical protein Csal_0253 17 None None None 92112751 Common - 2-dehydro-3-deoxyphosphooctonate aldolase Csal_0618 182 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 92115256 Common - peptidylprolyl isomerase, FKBP-type Csal_3141 147 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 92114379 Common - protein of unknown function DUF796 Csal_2258 30 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 92114165 Common - histone-like DNA-binding protein Csal_2043 205 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 92115427 Common - Tat-translocated enzyme Csal_3312 46 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 92112160 Common - peptidase M24 Csal_0024 241 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 92113314 Common - Aldehyde dehydrogenase (NAD+) Csal_1187 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113668 Common - protein of unknown function DUF163 Csal_1544 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 92112750 Common - CTP synthetase Csal_0617 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 92114650 Common - Protein of unknown function DUF160 Csal_2532 126 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 92114329 Common rplM 50S ribosomal protein L13 Csal_2207 233 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 92112783 Common - conserved hypothetical protein, predicted heme oxygenase family Csal_0650 22 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 92112777 Common - xylulokinase Csal_0644 183 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 92114223 Common - binding-protein-dependent transport systems inner membrane component Csal_2101 130 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 92115109 Nonpathogen - hypothetical protein Csal_2993 1 None None None 92115018 Common - GCN5-related N-acetyltransferase Csal_2901 120 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 92114038 Common - Twin-arginine translocation pathway signal Csal_1915 191 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 92112989 Common - Glycerol-3-phosphate O-acyltransferase Csal_0861 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 92115068 Common - Glycerate kinase Csal_2952 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 92114464 Common - leucyl-tRNA synthetase Csal_2344 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 92112337 Common - nitroreductase Csal_0202 104 COG0778 NfnB, Nitroreductase Energy production and conversion 92113335 Nonpathogen - transcriptional regulator, XRE family Csal_1209 4 COG1396 HipB, Predicted transcriptional regulators Transcription 92112985 Common - adenylate kinases Csal_0857 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 92114117 Common - hypothetical protein Csal_1995 97 COG0579 COG0579, Predicted dehydrogenase General function prediction only 92113442 Common - aldo/keto reductase Csal_1316 185 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 92115262 Common - thiamine biosynthesis protein ThiS Csal_3147 64 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 92112296 Common - short-chain dehydrogenase/reductase SDR Csal_0161 213 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 92114746 Common - Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Csal_2628 108 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 92114852 Common - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Csal_2734 184 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 92115399 Common - F0F1 ATP synthase subunit beta Csal_3284 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 92113011 Common - hypothetical protein Csal_0883 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 92112767 Common - binding-protein-dependent transport systems inner membrane component Csal_0634 168 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 92114410 Common - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Csal_2289 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 92113964 Common - PfkB Csal_1841 161 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 92113620 Nonpathogen - hypothetical protein Csal_1496 1 None None None 92113636 Common - acriflavin resistance protein Csal_1512 186 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 92114645 Common - Xanthine/uracil/vitamin C permease Csal_2527 135 COG2252 COG2252, Permeases General function prediction only 92115236 Common - proton-translocating NADH-quinone oxidoreductase, chain M Csal_3121 208 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 92112837 Common - YCII-related Csal_0705 69 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 92112824 Common - sodium pump decarboxylase, gamma subunit Csal_0692 4 COG3630 OadG, Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit Energy production and conversion 92112884 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_0755 6 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92112529 Common - 5,10-methylenetetrahydrofolate reductase Csal_0396 147 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 92114786 Common - hypothetical protein Csal_2668 28 COG3915 COG3915, Uncharacterized protein conserved in bacteria Function unknown 92115232 Common - GTP-binding protein, HSR1-related Csal_3117 179 COG0218 COG0218, Predicted GTPase General function prediction only 92114123 Common - cytochrome bd ubiquinol oxidase, subunit I Csal_2001 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 92115197 Common - ribosomal RNA methyltransferase RrmJ/FtsJ Csal_3082 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 92114141 Common - methyl-accepting chemotaxis sensory transducer Csal_2019 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92114922 Common - aldehyde dehydrogenase Csal_2805 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92114295 Common - methylation Csal_2173 10 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 92114948 Common - Pyrrolo-quinoline quinone Csal_2831 59 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 92112269 Common - transcriptional regulator, IclR family Csal_0134 116 COG1414 IclR, Transcriptional regulator Transcription 92114893 Common - alpha/beta hydrolase Csal_2775 120 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92113125 Common - formate dehydrogenase, alpha subunit Csal_0997 215 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 92113309 Common - glutamine amidotransferase class-I Csal_1182 123 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 92113885 Common - conserved hypothetical protein 698 Csal_1762 122 COG2855 COG2855, Predicted membrane protein Function unknown 92113065 Common - glyceraldehyde-3-phosphate dehydrogenase, type I Csal_0937 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 92113648 Common - ribose-phosphate pyrophosphokinase Csal_1524 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 92114479 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_2359 191 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92112558 Common - ribosomal protein S19 Csal_0425 248 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 92112157 Common - 5-formyltetrahydrofolate cyclo-ligase Csal_0021 182 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 92113674 Common - protein of unknown function DUF493 Csal_1550 51 COG2921 COG2921, Uncharacterized conserved protein Function unknown 92113102 Common rpsU 30S ribosomal protein S21 Csal_0974 102 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 92113951 Common - peptide chain release factor 3 Csal_1828 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 92115130 Common - 16S rRNA processing protein RimM Csal_3015 139 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 92112501 Common - amidohydrolase 2 Csal_0368 38 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 92114177 Common - ATPase-like protein Csal_2055 44 COG3899 COG3899, Predicted ATPase General function prediction only 92114611 Nonpathogen - hypothetical protein Csal_2493 1 None None None 92113399 Common - protein of unknown function UPF0079 Csal_1273 197 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 92112541 Common - SecE subunit of protein translocation complex Csal_0408 53 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 92112485 Common - aldehyde dehydrogenase Csal_0352 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113026 Common - Na+/H+ antiporter subunit Csal_0898 89 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 92112936 Common - ABC-2 Csal_0808 173 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 92112873 Nonpathogen - hypothetical protein Csal_0744 1 None None None 92114176 Common - UDP-2,3-diacylglucosamine hydrolase Csal_2054 82 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 92115400 Common - ATP synthase F1, gamma subunit Csal_3285 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 92114644 Common - hypothetical protein Csal_2526 51 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 92114617 Common - Lytic transglycosylase Csal_2499 153 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 92113532 Nonpathogen - putative prophage repressor Csal_1406 1 None None None 92112939 Common - LemA Csal_0811 129 COG1704 LemA, Uncharacterized conserved protein Function unknown 92113088 Common - 6-phosphogluconate dehydrogenase, NAD-binding Csal_0960 165 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 92115431 Common - putative inner membrane protein translocase component YidC Csal_3316 213 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 92112715 Common - thioredoxin-related Csal_0582 177 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 92114171 Common - S-ribosylhomocysteinase Csal_2049 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 92114731 Common - short-chain dehydrogenase/reductase SDR Csal_2613 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92115288 Common - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Csal_3173 156 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 92112225 Common - Endoribonuclease L-PSP Csal_0090 143 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 92115098 Common - deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) Csal_2982 179 COG0756 Dut, dUTPase Nucleotide transport and metabolism 92113924 Common rpmI 50S ribosomal protein L35 Csal_1801 138 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 92115258 Common - Auxin Efflux Carrier Csal_3143 117 COG0679 COG0679, Predicted permeases General function prediction only 92113738 Common - electron transfer flavoprotein, alpha subunit Csal_1614 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 92115254 Common - TRAP dicarboxylate transporter- DctM subunit Csal_3139 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92113207 Common - hypothetical protein Csal_1079 21 COG5340 COG5340, Predicted transcriptional regulator Transcription 92113494 Common - DNA adenine methylase Csal_1368 98 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 92114156 Nonpathogen - hypothetical protein Csal_2034 1 None None None 92114839 Common - Twin-arginine translocation pathway signal Csal_2721 60 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 92114761 Common - 2OG-Fe(II) oxygenase Csal_2643 30 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 92112324 Common - ABC transporter related Csal_0189 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 92112139 Common recF recombination protein F Csal_0003 166 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 92115386 Common - UvrD/REP helicase Csal_3271 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 92113775 Common - Na+/H+ antiporter NhaC Csal_1651 30 COG2056 COG2056, Predicted permease General function prediction only 92112653 Common - hypothetical protein Csal_0520 2 None None None 92115370 Common - heat shock protein Hsp20 Csal_3255 130 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 92112548 Common - DNA-directed RNA polymerase subunit beta' Csal_0415 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 92114556 Common - arginyl-tRNA-protein transferase Csal_2438 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 92112212 Common - Asp/Glu racemase Csal_0077 44 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 92113256 Common - short-chain dehydrogenase/reductase SDR Csal_1129 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114768 Common - phosphoribosyltransferase Csal_2650 69 COG1926 COG1926, Predicted phosphoribosyltransferases General function prediction only 92115054 Common - short chain fatty acid transporter Csal_2938 40 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 92112394 Common - binding-protein-dependent transport systems inner membrane component Csal_0259 175 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 92113984 Common - Superoxide dismutase Csal_1861 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 92113690 Common - ErfK/YbiS/YcfS/YnhG Csal_1566 91 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 92113816 Common - Undecaprenyl-phosphate galactosephosphotransferase Csal_1693 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 92112818 Common - hypothetical protein Csal_0686 4 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 92113144 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase Csal_1016 199 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 92115404 Common - ATP synthase F0, C subunit Csal_3289 67 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 92114245 Nonpathogen - glycosyl transferase, group 1 Csal_2123 13 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92112617 Common - hydroxymethylbutenyl pyrophosphate reductase Csal_0484 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 92115093 Common - Tripartite ATP-independent periplasmic transporter, DctQ component Csal_2977 50 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 92112731 Common - protein of unknown function DUF971 Csal_0598 49 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 92114404 Common - 3-dehydroquinate dehydratase Csal_2283 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 92112471 Common - transcriptional regulator, LysR family Csal_0338 115 COG0583 LysR, Transcriptional regulator Transcription 92115012 Common - UBA/THIF-type NAD/FAD binding fold Csal_2895 152 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 92113293 Common - 8-amino-7-oxononanoate synthase Csal_1166 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 92113545 Common - inner-membrane translocator Csal_1420 154 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 92114409 Common - helix-turn-helix, Fis-type Csal_2288 95 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 92114829 Common - protein of unknown function DUF980 Csal_2711 57 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 92115146 Common - response regulator receiver domain protein (CheY-like) Csal_3031 116 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 92113372 Common - glycosyl transferase, family 2 Csal_1246 156 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92112904 Common - transcriptional regulator, GntR family Csal_0776 101 COG1802 GntR, Transcriptional regulators Transcription 92113877 Nonpathogen - hypothetical protein Csal_1754 2 None None None 92114206 Common - molybdate-binding protein Csal_2084 61 COG2998 TupB, ABC-type tungstate transport system, permease component Coenzyme metabolism 92113824 Common - periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system-like protein Csal_1701 77 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 92113242 Common - isoaspartyl dipeptidase Csal_1115 22 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 92114753 Common - stationary-phase survival protein SurE Csal_2635 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 92115414 Common - HesB/YadR/YfhF Csal_3299 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 92113346 Common sucC succinyl-CoA synthetase subunit beta Csal_1220 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 92114708 Common - hypothetical protein Csal_2590 11 COG1993 COG1993, Uncharacterized conserved protein Function unknown 92112726 Common - twin-arginine translocation protein, TatA/E family Csal_0593 50 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 92112888 Common - Endoribonuclease L-PSP Csal_0759 32 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 92113210 Common - peptidase S8 and S53, subtilisin, kexin, sedolisin Csal_1082 21 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 92113863 Common - Gamma-glutamyltransferase Csal_1740 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 92114498 Common - methylmalonate-semialdehyde dehydrogenase Csal_2380 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92114622 Nonpathogen - hypothetical protein Csal_2504 1 None None None 92112416 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0282 122 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92113177 Common - iron-hydroxamate transporter permease subunit Csal_1049 100 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 92112206 Common - protein of unknown function DUF112, transmembrane Csal_0071 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 92114002 Common - protein of unknown function DUF785 Csal_1879 38 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 92113554 Common - heat shock protein Hsp20 Csal_1429 140 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 92114804 Common - L-lactate transport Csal_2686 104 COG1620 LldP, L-lactate permease Energy production and conversion 92113914 Nonpathogen - hypothetical protein Csal_1791 1 None None None 92114472 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_2352 156 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92115128 Common rplS 50S ribosomal protein L19 Csal_3013 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 92112455 Common - major facilitator superfamily MFS_1 Csal_0322 225 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92115298 Common - protein of unknown function RIO1 Csal_3183 66 COG1718 RIO1, Serine/threonine protein kinase involved in cell cycle control Signal transduction mechanisms / Cell division and chromosome partitioning 92115080 Common - protein of unknown function DUF395, YeeE/YedE Csal_2964 30 COG2391 COG2391, Predicted transporter component General function prediction only 92113609 Common - NADPH-dependent FMN reductase Csal_1485 65 COG0431 COG0431, Predicted flavoprotein General function prediction only 92114796 Common - TonB-dependent siderophore receptor Csal_2678 128 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 92113062 Common - Aldose 1-epimerase Csal_0934 52 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 92114191 Common - transcriptional regulator, TetR family Csal_2069 70 COG1309 AcrR, Transcriptional regulator Transcription 92113046 Common - PpiC-type peptidyl-prolyl cis-trans isomerase Csal_0918 163 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 92114610 Common pntA NAD(P) transhydrogenase subunit alpha Csal_2492 164 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 92114882 Common - sulphate transporter Csal_2764 166 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 92113610 Common - transcriptional regulator, ArsR family Csal_1486 74 COG0640 ArsR, Predicted transcriptional regulators Transcription 92113597 Common - anti-sigma-factor antagonist (STAS) domain protein Csal_1473 7 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 92113842 Common - glycosyl transferase, group 1 Csal_1719 154 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92114367 Nonpathogen - hypothetical protein Csal_2245 1 None None None 92113166 Common - Auxin Efflux Carrier Csal_1038 131 COG0679 COG0679, Predicted permeases General function prediction only 92113718 Common - HAD-superfamily hydrolase, subfamily IA, variant 1 Csal_1594 168 COG0546 Gph, Predicted phosphatases General function prediction only 92115271 Nonpathogen - hypothetical protein Csal_3156 1 None None None 92112722 Common - Twin-arginine translocation pathway signal Csal_0589 64 COG3211 PhoX, Predicted phosphatase General function prediction only 92113075 Common - transcriptional regulator, TetR family Csal_0947 54 COG1309 AcrR, Transcriptional regulator Transcription 92114044 Common - hypothetical protein Csal_1921 31 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 92112805 Nonpathogen - hypothetical protein Csal_0673 9 COG3650 COG3650, Predicted membrane protein Function unknown 92113279 Common - transcriptional regulator, GntR family Csal_1152 188 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 92113113 Common - Alcohol dehydrogenase GroES-like protein Csal_0985 210 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 92113357 Common - protein of unknown function DUF463, YcjX-like protein Csal_1231 42 COG3106 COG3106, Predicted ATPase General function prediction only 92114819 Common - transport system permease protein Csal_2701 173 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 92113239 Common - hypothetical protein Csal_1112 11 COG0439 AccC, Biotin carboxylase Lipid metabolism 92112601 Common - hypothetical protein Csal_0468 112 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 92113844 Common - glycosyl transferase, group 1 Csal_1721 178 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92113834 Common - sugar transferase Csal_1711 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 92115336 Common - glycosyl transferase, family 2 Csal_3221 44 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 92114509 Common - protein of unknown function DUF1282 Csal_2391 24 None None None 92113182 Common - L-lysine 6-monooxygenase (NADPH) Csal_1054 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 92115428 Common - protein of unknown function DUF451 Csal_3313 23 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 92113223 Common - hypothetical protein Csal_1096 4 None None None 92114962 Common - Inositol-1(or 4)-monophosphatase Csal_2845 175 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 92112678 Nonpathogen - hypothetical protein Csal_0545 1 None None None 92112798 Common - 6-phosphogluconate dehydrogenase-like protein Csal_0666 187 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 92113490 Nonpathogen - hypothetical protein Csal_1364 1 COG1703 ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family Amino acid transport and metabolism 92112181 Common - peptidase M23B Csal_0045 209 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 92113270 Common - Alpha-L-arabinofuranosidase Csal_1143 42 COG3507 XynB, Beta-xylosidase Carbohydrate transport and metabolism 92113789 Common - TadE-like protein Csal_1665 7 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 92114114 Common - hypothetical protein Csal_1992 7 None None None 92112373 Common - OmpW Csal_0238 63 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 92115347 Common - major facilitator superfamily MFS_1 Csal_3232 20 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92114280 Common - FxsA cytoplasmic membrane protein Csal_2158 53 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 92112217 Common - membrane protein-like protein Csal_0082 13 COG4329 COG4329, Predicted membrane protein Function unknown 92112405 Common - TRAP dicarboxylate transporter, DctP subunit Csal_0271 95 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92114305 Common - hypothetical protein Csal_2183 2 COG4701 COG4701, Uncharacterized protein conserved in bacteria Function unknown 92113382 Nonpathogen - hypothetical protein Csal_1256 4 None None None 92113849 Common - methyl-accepting chemotaxis sensory transducer Csal_1726 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 92114072 Common - ABC transporter related Csal_1949 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 92112366 Common - CRISPR-associated protein, CT1974 Csal_0231 35 None None None 92115115 Common - binding-protein-dependent transport systems inner membrane component Csal_3000 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 92114959 Common - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csal_2842 208 COG0388 COG0388, Predicted amidohydrolase General function prediction only 92113045 Common - Organic solvent tolerance protein Csal_0917 114 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 92114360 Common - Rod shape-determining protein MreD Csal_2238 60 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 92113905 Common - periplasmic sensor signal transduction histidine kinase Csal_1782 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92112971 Nonpathogen - hypothetical protein Csal_0843 1 None None None 92113930 Nonpathogen - hypothetical protein Csal_1807 1 None None None 92113251 Common - transcriptional regulator, LysR family Csal_1124 85 COG0583 LysR, Transcriptional regulator Transcription 92113710 Common - Lipid A export ATP-binding/permease protein MsbA Csal_1586 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 92113262 Common - Pirin-like protein Csal_1135 148 COG1741 COG1741, Pirin-related protein General function prediction only 92112650 Common - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Csal_0517 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 92114585 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Csal_2467 226 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 92112496 Common - periplasmic binding protein/LacI transcriptional regulator Csal_0363 114 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 92113301 Nonpathogen - hypothetical protein Csal_1174 19 COG0392 COG0392, Predicted integral membrane protein Function unknown 92114530 Common - conserved hypothetical HI1195 Csal_2412 46 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 92114798 Common - protein of unknown function DUF1656 Csal_2680 5 None None None 92113529 Nonpathogen - hypothetical protein Csal_1403 1 None None None 92114065 Common - ribonuclease H Csal_1942 180 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 92112326 Common - protein of unknown function DUF198 Csal_0191 48 COG1469 COG1469, Uncharacterized conserved protein Function unknown 92114210 Common - uracil-xanthine permease Csal_2088 132 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 92113341 Common sdhA succinate dehydrogenase flavoprotein subunit Csal_1215 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 92112589 Common - beta-ketoacyl synthase Csal_0456 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92112737 Common - ribosomal protein L31 Csal_0604 174 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 92113746 Nonpathogen - hypothetical protein Csal_1622 1 None None None 92114902 Common - extracellular solute-binding protein, family 3 Csal_2784 162 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 92112773 Common - Tagatose-6-phosphate kinase Csal_0640 31 COG4573 GatZ, Predicted tagatose 6-phosphate kinase Carbohydrate transport and metabolism 92113116 Common - peptidase M19, renal dipeptidase Csal_0988 101 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 92112635 Common ilvH acetolactate synthase 3 regulatory subunit Csal_0502 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 92112315 Nonpathogen - hypothetical protein Csal_0180 2 COG1416 COG1416, Uncharacterized conserved protein Function unknown 92112348 Common - Acetamidase/Formamidase Csal_0213 66 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 92115037 Common - DNA polymerase III chi subunit, HolC Csal_2921 73 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 92112191 Common - RNA binding S1 Csal_0056 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 92113137 Common - Lysine exporter protein (LYSE/YGGA) Csal_1009 98 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 92115087 Common - ribosomal protein L28 Csal_2971 160 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 92112353 Common mdoD glucan biosynthesis protein D Csal_0218 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 92113890 Common - Uncharacterized protein UPF0065 Csal_1767 73 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 92112472 Common - monooxygenase, FAD-binding Csal_0339 116 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 92115226 Nonpathogen - hypothetical protein Csal_3111 1 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 92112458 Common - Extradiol ring-cleavage dioxygenase LigAB, LigA subunit Csal_0325 19 None None None 92114526 Common - TRAP transporter solute receptor, TAXI family Csal_2408 75 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 92114571 Common - isopropylmalate isomerase large subunit Csal_2453 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 92113403 Common - Host factor Hfq Csal_1277 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 92114167 Common clpX ATP-dependent protease ATP-binding subunit Csal_2045 231 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 92114267 Common - hypothetical protein Csal_2145 4 None None None 92113801 Common - plasmid maintenance system antidote protein, XRE family Csal_1677 67 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 92115077 Common - hypothetical protein Csal_2961 9 None None None 92113872 Common - Altronate dehydratase Csal_1749 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 92114867 Common - acyl carrier protein, putative Csal_2749 47 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92114887 Common - transcriptional regulator, LysR family Csal_2769 150 COG0583 LysR, Transcriptional regulator Transcription 92114733 Common - mandelate racemase/muconate lactonizing enzyme Csal_2615 112 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 92113289 Common - adenosylmethionine-8-amino-7-oxononanoate aminotransferase Csal_1162 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 92112930 Common - hypothetical protein Csal_0802 7 None None None 92113338 Common - Citrate synthase I Csal_1212 194 COG0372 GltA, Citrate synthase Energy production and conversion 92112277 Common - Aldehyde dehydrogenase (NAD+) Csal_0142 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92115222 Common - protein of unknown function DUF513, hemX Csal_3107 57 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 92114029 Common - transcriptional regulator, XRE family Csal_1906 98 COG1396 HipB, Predicted transcriptional regulators Transcription 92113192 Nonpathogen - hypothetical protein Csal_1064 1 None None None 92112788 Common - Extensin-like protein Csal_0656 37 COG3921 COG3921, Uncharacterized protein conserved in bacteria Function unknown 92115167 Common - twitching motility protein Csal_3052 214 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 92112491 Common - transcriptional regulator, DeoR family Csal_0358 67 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 92114207 Common - two component, sigma54 specific, transcriptional regulator, Fis family Csal_2085 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 92113502 Common - phage P2 GpE Csal_1376 3 None None None 92114628 Common - hypothetical protein Csal_2510 4 None None None 92114027 Common - CoA-binding Csal_1904 147 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 92115330 Common - Ribulose-bisphosphate carboxylase Csal_3215 67 COG1850 RbcL, Ribulose 1,5-bisphosphate carboxylase, large subunit Carbohydrate transport and metabolism 92114976 Common - diguanylate cyclase Csal_2859 206 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 92115281 Common - hypothetical protein Csal_3166 9 None None None 92112813 Common - iron-containing alcohol dehydrogenase Csal_0681 172 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 92114145 Common - CheW protein Csal_2023 123 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 92114771 Common - Disulphide bond formation protein DsbB Csal_2653 30 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 92115053 Common - MATE efflux family protein Csal_2937 113 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 92113762 Common - (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA Csal_1638 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 92113509 Nonpathogen - hypothetical protein Csal_1383 2 None None None 92113412 Common - glucosyltransferase MdoH Csal_1286 53 COG2943 MdoH, Membrane glycosyltransferase Cell envelope biogenesis, outer membrane 92113897 Common - Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Csal_1774 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 92115008 Common - Bile acid:sodium symporter Csal_2891 98 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 92112188 Common - ABC transporter related Csal_0053 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 92112862 Common - inosine-5'-monophosphate dehydrogenase Csal_0730 240 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 92113473 Common - heat shock protein HtpX Csal_1347 191 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 92115010 Nonpathogen - hypothetical protein Csal_2893 1 None None None 92115066 Nonpathogen - hypothetical protein Csal_2950 1 None None None 92112464 Common - transcriptional regulator, LysR family Csal_0331 183 COG0583 LysR, Transcriptional regulator Transcription 92112628 Common - NAD+ synthetase Csal_0495 221 COG0171 NadE, NAD synthase Coenzyme metabolism 92114629 Common - hypothetical protein Csal_2511 17 COG5616 COG5616, Predicted integral membrane protein Function unknown 92114715 Common - protein of unknown function DUF395, YeeE/YedE Csal_2597 61 COG2391 COG2391, Predicted transporter component General function prediction only 92112513 Common nrdF ribonucleotide-diphosphate reductase subunit beta Csal_0380 152 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 92114653 Common - 2-isopropylmalate synthase Csal_2535 210 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 92113912 Common - molybdopterin dehydrogenase, FAD-binding Csal_1789 122 COG4630 XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A Nucleotide transport and metabolism 92112835 Common - DNA ligase, NAD-dependent Csal_0703 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 92114200 Common - molybdenum cofactor biosynthesis protein C Csal_2078 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 92114991 Common - sodium:dicarboxylate symporter Csal_2874 149 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 92113282 Common - Negative transcriptional regulator Csal_1155 60 COG2808 PaiB, Transcriptional regulator Transcription 92112289 Common - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Csal_0154 170 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 92115316 Common - ATP-dependent DNA helicase Rep Csal_3201 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 92112913 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase Csal_0785 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92112415 Common - hypothetical protein Csal_0281 19 None None None 92113946 Common grxA glutaredoxin 1 Csal_1823 29 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 92114442 Common - glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase Csal_2321 234 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 92115004 Common - BCCT transporter Csal_2887 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92112924 Common - protoporphyrinogen oxidase Csal_0796 48 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 92112958 Common - Thymidine phosphorylase Csal_0830 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 92115179 Common - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Csal_3064 198 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 92112711 Common dnaE DNA polymerase III subunit alpha Csal_0578 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 92112892 Common - alpha/beta hydrolase Csal_0764 175 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 92114183 Common - glycerophosphoryl diester phosphodiesterase Csal_2061 173 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 92113240 Common - Cyanophycinase Csal_1113 26 COG4242 CphB, Cyanophycinase and related exopeptidases Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 92113858 Common - Altronate dehydratase Csal_1735 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 92114275 Nonpathogen - hypothetical protein Csal_2153 1 None None None 92113348 Common - conserved hypothetical protein 374 Csal_1222 12 COG0392 COG0392, Predicted integral membrane protein Function unknown 92114840 Common - ornithine cyclodeaminase Csal_2722 93 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 92113091 Common - membrane protein-like protein Csal_0963 33 COG3671 COG3671, Predicted membrane protein Function unknown 92112594 Common - protein of unknown function DUF1365 Csal_0461 63 COG3496 COG3496, Uncharacterized conserved protein Function unknown 92112761 Nonpathogen - hypothetical protein Csal_0628 2 None None None 92115305 Common - 6-phosphogluconate dehydrogenase, NAD-binding Csal_3190 172 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 92112335 Common - hypothetical protein Csal_0200 5 None None None 92114721 Common - hypothetical protein Csal_2603 36 None None None 92114631 Common - putative transport Csal_2513 27 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 92113055 Common - transcriptional regulator, LacI family Csal_0927 126 COG1609 PurR, Transcriptional regulators Transcription 92112138 Common - DNA polymerase III subunit beta Csal_0002 213 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 92114350 Common - PTS IIA-like nitrogen-regulatory protein PtsN Csal_2228 135 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 92112572 Common - ribosomal protein L30 Csal_0439 157 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 92113702 Common - hypothetical protein Csal_1578 7 None None None 92115208 Common - Chaperone DnaJ Csal_3093 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 92115173 Common - Methionine biosynthesis MetW Csal_3058 64 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 92114196 Common - beta-lactamase-like protein Csal_2074 155 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 92114551 Common - chromosome replication initiation inhibitor protein Csal_2433 115 COG0583 LysR, Transcriptional regulator Transcription 92115366 Common - Chorismate lyase Csal_3251 40 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 92114336 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase Csal_2214 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 92113977 Common - OmpA/MotB Csal_1854 152 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 92113982 Common - UTP-glucose-1-phosphate uridylyltransferase Csal_1859 230 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 92115355 Common - 2',5' RNA ligase Csal_3240 84 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 92114427 Common ureB urease subunit beta Csal_2306 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 92113534 Nonpathogen - hypothetical protein Csal_1408 1 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 92114564 Common - adenylosuccinate lyase Csal_2446 233 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 92113485 Common - conserved hypothetical phage-related protein Csal_1359 10 None None None 92115278 Common - nitrogen regulatory protein P-II (GlnB, GlnK) Csal_3163 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 92112799 Common - ribonucleotide-diphosphate reductase subunit beta Csal_0667 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 92112579 Common - DNA-directed RNA polymerase subunit alpha Csal_0446 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 92114132 Common - diguanylate cyclase with PAS/PAC and GAF sensors Csal_2010 186 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 92113651 Common - Tetratricopeptide TPR_4 Csal_1527 118 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 92114143 Common - MCP methyltransferase, CheR-type Csal_2021 150 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 92114134 Common - hypothetical protein Csal_2012 8 None None None 92112662 Common - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Csal_0529 120 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 92114589 Common - Auxin Efflux Carrier Csal_2471 102 COG0679 COG0679, Predicted permeases General function prediction only 92113996 Common - extracellular solute-binding protein, family 5 Csal_1873 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 92112907 Common - Na+/H+ antiporter NhaC Csal_0779 47 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 92114500 Common - hypothetical protein Csal_2382 10 None None None 92114306 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Csal_2184 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 92114495 Nonpathogen - hypothetical protein Csal_2377 1 None None None 92112518 Common - S-adenosylmethionine synthetase Csal_0385 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 92112940 Common - protein of unknown function DUF477 Csal_0812 88 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 92114872 Common - hypothetical protein Csal_2754 29 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 92112439 Common - TRAP dicarboxylate transporter- DctM subunit Csal_0305 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 92114603 Common - TRAP dicarboxylate transporter- DctP subunit Csal_2485 114 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 92114019 Common - arsenate reductase Csal_1896 114 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 92113522 Common - phage small terminase subunit Csal_1396 22 None None None 92112522 Common - transcriptional regulator, XRE family Csal_0389 62 COG1396 HipB, Predicted transcriptional regulators Transcription 92113431 Common - hypothetical protein Csal_1305 18 COG3782 COG3782, Uncharacterized protein conserved in bacteria Function unknown 92113461 Common - DNA-directed DNA polymerase Csal_1335 181 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 92114894 Common - Tartrate dehydrogenase Csal_2776 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 92113249 Common - transcriptional regulator, LysR family Csal_1122 158 COG0583 LysR, Transcriptional regulator Transcription 92115107 Common - hypothetical protein Csal_2991 22 COG3074 COG3074, Uncharacterized protein conserved in bacteria Function unknown 92112621 Common - hypothetical protein Csal_0488 21 None None None 92114763 Common - choline transport protein BetT Csal_2645 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 92113421 Common - peptide methionine sulfoxide reductase Csal_1295 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 92114383 Common - ImcF-related Csal_2262 46 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 92114688 Common - hypothetical protein Csal_2570 18 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 92113570 Common - Phospholipase A1 Csal_1446 52 COG2829 PldA, Outer membrane phospholipase A Cell envelope biogenesis, outer membrane 92114912 Common - transcriptional regulator, AraC family Csal_2795 102 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 92115159 Common - Sel1-like protein Csal_3044 8 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 92113452 Common - globin Csal_1326 66 COG2346 COG2346, Truncated hemoglobins General function prediction only 92114036 Common - cytoplasmic chaperone TorD Csal_1913 27 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 92114998 Common - plasmid maintenance system antidote protein, XRE family Csal_2881 78 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 92112402 Common - HAD-superfamily hydrolase subfamily IA, variant 3 Csal_0268 121 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 92113686 Common - hypothetical protein Csal_1562 3 None None None 92113942 Common - phospholipid/glycerol acyltransferase Csal_1819 30 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 92114876 Common - beta-ketoacyl synthase Csal_2758 208 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 92115190 Common - NusA antitermination factor Csal_3075 216 COG0195 NusA, Transcription elongation factor Transcription 92114422 Common - HupE/UreJ protein Csal_2301 44 COG2370 HupE, Hydrogenase/urease accessory protein Posttranslational modification, protein turnover, chaperones 92113799 Common - major facilitator superfamily MFS_1 Csal_1675 61 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 92112974 Common - pyrroloquinoline quinone biosynthesis protein PqqC Csal_0846 39 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 92114055 Common - ABC transporter related Csal_1932 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 92113443 Common - MATE efflux family protein Csal_1317 140 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 92112533 Common - sodium:neurotransmitter symporter Csal_0400 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 92115095 Common - Mannitol dehydrogenase-like protein Csal_2979 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 92112692 Common - hypothetical protein Csal_0559 94 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 92114436 Common - seryl-tRNA synthetase Csal_2315 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 92112424 Nonpathogen - hypothetical protein Csal_0290 3 None None None 92113013 Common - DNA/RNA non-specific endonuclease Csal_0885 47 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 92112847 Common - periplasmic sensor signal transduction histidine kinase Csal_0715 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 92113999 Common - L-2,4-diaminobutyric acid acetyltransferase Csal_1876 31 COG0456 RimI, Acetyltransferases General function prediction only 92113006 Common - hypothetical protein Csal_0878 19 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 92114816 Common - glutathione S-transferase-like protein Csal_2698 64 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 92112254 Common - spermidine synthase Csal_0119 116 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 92114439 Common - sodium/hydrogen exchanger Csal_2318 107 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 92113819 Nonpathogen - hypothetical protein Csal_1696 2 None None None 92114864 Common - protein of unknown function UPF0060 Csal_2746 63 COG1742 COG1742, Uncharacterized conserved protein Function unknown 92115201 Common - carbamoyl-phosphate synthase, small subunit Csal_3086 234 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 92113146 Common - transcriptional regulator, LysR family Csal_1018 161 COG0583 LysR, Transcriptional regulator Transcription 92112447 Nonpathogen - hypothetical protein Csal_0313 1 None None None 92113035 Common - protein of unknown function DUF558 Csal_0907 40 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 92114157 Common - hypothetical protein Csal_2035 15 None None None 92114430 Common - ABC transporter related Csal_2309 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 92114578 Common - Aldehyde dehydrogenase (NAD+) Csal_2460 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 92113350 Common - glycosyl transferase, group 1 Csal_1224 198 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 92114710 Common - cytochrome c biogenesis protein, transmembrane region Csal_2592 80 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 92114096 Common - Flagellar basal-body rod FlgG Csal_1973 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 92112272 Common - major facilitator superfamily MFS_1 Csal_0137 206 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 92113159 Common - Allophanate hydrolase subunit 2 Csal_1031 114 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 92113573 Common - extracellular solute-binding protein, family 1 Csal_1449 26 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 92113365 Nonpathogen - hypothetical protein Csal_1239 1 None None None 92114487 Nonpathogen - hypothetical protein Csal_2367 1 None None None 92115199 Common - GreA/GreB family elongation factor Csal_3084 204 COG0782 GreA, Transcription elongation factor Transcription 92115183 Common - Acetyl-CoA C-acetyltransferase Csal_3068 175 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 92114346 Common - OstA-like protein Csal_2224 48 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 92114370 Common - hypothetical protein Csal_2248 6 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 92112177 Common - transcriptional regulator, TetR family Csal_0041 81 COG1309 AcrR, Transcriptional regulator Transcription 92114341 Common - protein of unknown function DUF140 Csal_2219 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 92113786 Common - Tetratricopeptide TPR_2 Csal_1662 22 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 92113297 Common - exodeoxyribonuclease V, alpha subunit Csal_1170 120 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 92114507 Common - flavin-containing monooxygenase FMO Csal_2389 64 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 92112463 Common - LmbE-like protein Csal_0330 20 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 92113724 Common - malonyl CoA-acyl carrier protein transacylase Csal_1600 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 92112580 Common - ribosomal protein L17 Csal_0447 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 92113150 Common - short chain dehydrogenase Csal_1022 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 92114253 Nonpathogen - hypothetical protein Csal_2131 1 None None None 92114542 Common - para-aminobenzoate synthase, component I Csal_2424 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 92113583 Common - conserved hypothetical protein 103 Csal_1459 79 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown