Aster yellows witches'-broom phytoplasma AYWB, complete genome NC_007716 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 85057520 Pathogen - hypothetical protein AYWB_240 1 None None None 85057293 Common - hypothetical protein AYWB_013 13 COG4720 COG4720, Predicted membrane protein Function unknown 85057596 Common argS arginyl-tRNA synthetase AYWB_316 165 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057950 Common malK ABC-type maltose/maltodextrin transport system, ATP-binding protein MalK AYWB_670 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 85057288 Common prfA bacterial peptide chain release factor 1 AYWB_008 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 85057585 Common prfB bacterial peptide chain release factor 2 AYWB_305 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 85057812 Common - Zn-dependent carboxypeptidase AYWB_532 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 85057567 Common tra5 Tra5 transposase AYWB_287 123 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 85057466 Pathogen - hypothetical protein AYWB_186 1 None None None 85057498 Pathogen - hypothetical protein AYWB_218 1 None None None 85057549 Pathogen - hypothetical protein AYWB_269 5 None None None 85057438 Pathogen - hypothetical protein AYWB_158 2 None None None 85057497 Pathogen - hypothetical protein AYWB_217 2 None None None 85057335 Pathogen - hypothetical protein AYWB_055 2 None None None 85057321 Pathogen - hypothetical protein AYWB_041 2 None None None 85057563 Pathogen - hypothetical protein AYWB_283 2 None None None 85057299 Pathogen - hypothetical protein AYWB_019 2 None None None 85057743 Common rplJ 50S ribosomal protein L10 AYWB_463 154 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 85057689 Common hflB ATP-dependent Zn protease AYWB_409 249 COG1223 COG1223, Predicted ATPase (AAA+ superfamily) General function prediction only 85057650 Pathogen - hypothetical protein AYWB_370 2 None None None 85057375 Common potA ABC-type spermidine/putrescine transport, ATP-binding protein PotA AYWB_095 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 85057717 Common eno enolase AYWB_437 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 85057869 Common metN methionine transport ATP-binding protein AYWB_589 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 85057694 Common hflB ATP-dependent Zn protease AYWB_414 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 85057704 Common asm N6-adenine-specific methylase AYWB_424 191 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 85057751 Common - hypothetical protein AYWB_471 7 None None None 85057874 Common hisS histidyl-tRNA synthetase AYWB_594 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057906 Common obgE GTPase ObgE AYWB_626 249 COG0536 Obg, Predicted GTPase General function prediction only 85057511 Pathogen - hypothetical protein AYWB_231 1 None None None 85057404 Pathogen - hypothetical protein AYWB_124 1 None None None 85057670 Pathogen - hypothetical protein AYWB_390 2 None None None 85057445 Pathogen - hypothetical protein AYWB_165 1 None None None 85057400 Common pssA CDP-diacylglycerol-serine O-phosphatidyltransferase AYWB_120 99 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 85057882 Pathogen - hypothetical protein AYWB_602 2 None None None 85057367 Common - hypothetical protein AYWB_087 9 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057502 Common tmk thymidylate kinase AYWB_222 204 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 85057457 Pathogen - hypothetical protein AYWB_177 2 None None None 85057855 Common ppa Inorganic pyrophosphatase AYWB_575 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 85057876 Common spoT GTP pyrophosphokinase AYWB_596 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 85057828 Common - putative hydrolase of the HAD superfamily AYWB_548 38 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 85057330 Common - hypothetical protein AYWB_050 44 None None None 85057768 Pathogen - hypothetical protein AYWB_488 1 None None None 85057515 Pathogen - hypothetical protein AYWB_235 1 None None None 85057616 Common uvrA excinuclease ABC subunit A AYWB_336 245 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 85057345 Common ffh signal recognition particle, subunit FFH/SRP54 AYWB_065 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 85057542 Common artM ABC-type amino acid transport system, permease component AYWB_262 164 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057521 Common rpsD 30S ribosomal protein S4 AYWB_241 234 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 85057486 Common - hypothetical protein AYWB_206 29 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 85057475 Common - hypothetical protein AYWB_195 3 None None None 85057721 Common norM Na+ driven multidrug efflux pump AYWB_441 6 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 85057351 Pathogen - fragment of ATP-dependent Zn protease AYWB_071 2 None None None 85057579 Common - hypothetical protein AYWB_299 37 None None None 85057358 Common - hypothetical protein AYWB_078 80 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057736 Common tufB elongation factor Tu AYWB_456 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 85057860 Common glnS glutamyl-tRNA synthetase AYWB_580 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 85057900 Pathogen - hypothetical protein AYWB_620 2 None None None 85057306 Common nrdF ribonucleotide-diphosphate reductase subunit beta AYWB_026 115 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 85057728 Common - HAD hydrolase AYWB_448 76 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 85057771 Common holB DNA polymerase III, delta prime subunit AYWB_491 61 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 85057849 Common rbfA ribosome-binding factor A AYWB_569 113 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 85057896 Common dnaG DNA primase AYWB_616 144 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057399 Pathogen - hypothetical protein AYWB_119 2 None None None 85057553 Pathogen - hypothetical protein AYWB_273 2 None None None 85057528 Pathogen - hypothetical protein AYWB_248 1 None None None 85057617 Pathogen - hypothetical protein AYWB_337 2 None None None 85057934 Common rpoZ DNA-directed RNA polymerase omega chain AYWB_654 10 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 85057862 Common rplM 50S ribosomal protein L13 AYWB_582 215 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 85057922 Pathogen - hypothetical protein AYWB_642 2 None None None 85057813 Common mgtA cation transport ATPase AYWB_533 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 85057653 Pathogen - hypothetical protein AYWB_373 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057658 Common ssb single-stranded DNA binding protein AYWB_378 127 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057664 Pathogen - hypothetical protein AYWB_384 2 None None None 85057395 Common uvrD UvrD helicase AYWB_115 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 85057606 Common sodA superoxide dismutase AYWB_326 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 85057534 Common gyrA DNA gyrase subunit A AYWB_254 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 85057642 Pathogen - hypothetical protein AYWB_362 3 None None None 85057572 Pathogen - hypothetical protein AYWB_292 2 None None None 85057530 Common - hypothetical protein AYWB_250 195 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 85057634 Pathogen - hypothetical protein AYWB_354 2 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 85057757 Pathogen - hypothetical protein AYWB_477 2 None None None 85057562 Common tmk thymidylate kinase AYWB_282 184 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 85057322 Pathogen - hypothetical protein AYWB_042 2 None None None 85057439 Pathogen - hypothetical protein AYWB_159 2 None None None 85057352 Pathogen - hypothetical protein AYWB_072 2 None None None 85057374 Common potB ABC-type spermidine/putrescine transport system, permease protein PotB AYWB_094 175 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 85057506 Common - hypothetical protein AYWB_226 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057615 Pathogen - hypothetical protein AYWB_335 1 None None None 85057582 Common mutT MutT/nudix family phosphohydrolase AYWB_302 40 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 85057750 Common pnp polynucleotide phosphorylase/polyadenylase AYWB_470 233 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 85057740 Common rpoC DNA-directed RNA polymerase beta' chain AYWB_460 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 85057651 Pathogen - hypothetical protein AYWB_371 1 None None None 85057389 Common grs1 glycyl-tRNA synthetase AYWB_109 90 COG0423 GRS1, Glycyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 85057294 Common cbiO ABC-type cobalt transport system, ATP-binding protein AYWB_014 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 85057594 Common - hypothetical protein AYWB_314 167 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057474 Common rpoD RNA polymerase sigma factor AYWB_194 24 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 85057772 Common tmk thymidylate kinase AYWB_492 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 85057499 Common dnaG DNA primase AYWB_219 172 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057291 Common - GTPase EngB AYWB_011 186 COG0218 COG0218, Predicted GTPase General function prediction only 85057597 Common nfo endonuclease IV AYWB_317 106 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 85057566 Pathogen - hypothetical protein AYWB_286 2 None None None 85057699 Common smtA SAM-dependent methyltransferase AYWB_419 32 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 85057951 Common asnC asparaginyl-tRNA synthetase AYWB_671 201 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 85057626 Pathogen - hypothetical protein AYWB_346 2 None None None 85057830 Common cdsA phosphatidate cytidylyltransferase AYWB_550 118 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 85057419 Common lpd dihydrolipoamide dehydrogenase AYWB_139 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 85057318 Pathogen - hypothetical protein AYWB_038 2 None None None 85057875 Pathogen - hypothetical protein AYWB_595 1 None None None 85057459 Common dnaB replicative DNA helicase AYWB_179 211 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057398 Common - hypothetical protein AYWB_118 8 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 85057856 Common spoU 23S rRNA methyltransferase AYWB_576 195 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 85057723 Common - GTP-binding protein AYWB_443 93 COG1161 COG1161, Predicted GTPases General function prediction only 85057300 Pathogen - hypothetical protein AYWB_020 2 None None None 85057881 Common groES 10 kDa chaperonin GroES AYWB_601 4 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 85057346 Common polA DNA polymerase I AYWB_066 217 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 85057558 Common - hypothetical protein AYWB_278 59 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057758 Pathogen - hypothetical protein AYWB_478 1 None None None 85057514 Common - hypothetical protein AYWB_234 10 None None None 85057693 Pathogen - hypothetical protein AYWB_413 2 COG3859 COG3859, Predicted membrane protein Function unknown 85057767 Common - hypothetical protein AYWB_487 167 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 85057827 Common fba fructose bisphosphate aldolase AYWB_547 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 85057928 Common ksgA dimethyladenosine transferase AYWB_648 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 85057287 Common dnaB replicative DNA helicase AYWB_007 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057282 Common dnaN DNA polymerase III, beta subunit AYWB_002 211 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 85057403 Pathogen - hypothetical protein AYWB_123 1 None None None 85057809 Common dppA ABC-type dipeptide-binding protein, solute binding protein AYWB_529 153 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 85057510 Common himA DNA-binding protein HU AYWB_230 158 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057503 Common - hypothetical protein AYWB_223 9 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 85057707 Common - hypothetical protein AYWB_427 4 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 85057366 Pathogen - hypothetical protein AYWB_086 2 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057873 Common aspS aspartyl-tRNA synthetase AYWB_593 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057504 Pathogen - hypothetical protein AYWB_224 2 None None None 85057895 Pathogen - hypothetical protein AYWB_615 2 None None None 85057714 Common pykF pyruvate kinase AYWB_434 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 85057527 Pathogen - hypothetical protein AYWB_247 1 None None None 85057802 Common rplC LSU ribosomal protein L3P AYWB_522 217 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 85057781 Common adk adenylate kinase AYWB_501 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 85057759 Common himA DNA-binding protein HU AYWB_479 187 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057338 Pathogen - hypothetical protein AYWB_058 1 None None None 85057720 Common pfkA 6-phophofructokinase AYWB_440 146 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 85057578 Common - hypothetical protein AYWB_298 9 None None None 85057940 Common rplT LSU ribosomal protein L20P AYWB_660 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 85057671 Pathogen - hypothetical protein AYWB_391 1 None None None 85057739 Common rpsL 30S ribosomal protein S12 AYWB_459 245 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 85057673 Pathogen - hypothetical protein AYWB_393 1 None None None 85057914 Common glnQ ABC-type glutamine transport system, ATP-binding protein glnQ AYWB_634 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 85057359 Pathogen - hypothetical protein AYWB_079 2 None None None 85057571 Common - hypothetical protein AYWB_291 38 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 85057643 Pathogen - hypothetical protein AYWB_363 2 None None None 85057531 Common qri7 O-sialoglycoprotein endopeptidase AYWB_251 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 85057625 Pathogen - hypothetical protein AYWB_345 1 None None None 85057901 Common mntB ABC-type Mn/Zn transport system, membrane protein AYWB_621 178 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 85057814 Pathogen - hypothetical protein AYWB_534 2 COG1284 COG1284, Uncharacterized conserved protein Function unknown 85057535 Common gyrB DNA gyrase subunit B AYWB_255 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 85057933 Common - hypothetical protein AYWB_653 87 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 85057921 Pathogen - hypothetical protein AYWB_641 2 None None None 85057793 Common rpsQ 30S ribosomal protein S17 AYWB_513 226 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 85057863 Pathogen - hypothetical protein AYWB_583 1 None None None 85057665 Pathogen - hypothetical protein AYWB_385 2 None None None 85057659 Common dam adenine-specific methyltransferase AYWB_379 88 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 85057305 Common nrdA ribonucleoside-diphosphate reductase alpha chain AYWB_025 199 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 85057394 Pathogen - hypothetical protein AYWB_114 1 None None None 85057507 Pathogen - hypothetical protein AYWB_227 2 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 85057605 Pathogen - hypothetical protein AYWB_325 1 None None None 85057864 Common thiJ 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme AYWB_584 117 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 85057826 Common pgk phosphoglycerate kinase AYWB_546 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 85057718 Common pgi glucose-6-phosphate isomerase AYWB_438 198 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 85057428 Pathogen - hypothetical protein AYWB_148 2 None None None 85057477 Pathogen - hypothetical protein AYWB_197 2 None None None 85057796 Common rpsC 30S ribosomal protein S3 AYWB_516 222 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 85057884 Common rpmE 50S ribosomal protein L31 AYWB_604 122 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 85057775 Common rpoA DNA-directed RNA polymerase subunit alpha AYWB_495 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 85057878 Common qns glutamine-dependent NAD(+) synthetase AYWB_598 118 COG0388 COG0388, Predicted amidohydrolase General function prediction only 85057501 Pathogen - hypothetical protein AYWB_221 2 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 85057630 Common - hypothetical protein AYWB_350 3 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 85057407 Pathogen - hypothetical protein AYWB_127 1 None None None 85057312 Pathogen - hypothetical protein AYWB_032 2 None None None 85057857 Common thiI thiamine biosynthesis protein ThiI AYWB_577 93 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 85057406 Pathogen - hypothetical protein AYWB_126 1 None None None 85057540 Pathogen - hypothetical protein AYWB_260 2 None None None 85057402 Common pyrG CTP synthetase AYWB_122 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 85057513 Common rpoD RNA polymerase sigma factor AYWB_233 20 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 85057618 Pathogen - hypothetical protein AYWB_338 2 None None None 85057927 Common - HD superfamily phosphohydrolase AYWB_647 88 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 85057779 Common infA bacterial protein translation initiation factor 1 AYWB_499 211 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 85057569 Common tra5 Tra5 transposase AYWB_289 118 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 85057680 Pathogen - hypothetical protein AYWB_400 1 None None None 85057598 Common srmB superfamily II DNA and RNA helicase AYWB_318 229 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 85057588 Common rplS 50S ribosomal protein L19 AYWB_308 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 85057547 Pathogen - hypothetical protein AYWB_267 2 None None None 85057629 Pathogen - hypothetical protein AYWB_349 2 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057495 Common tra5 Tra5 transposase AYWB_215 130 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 85057532 Common - glycoprotease protein family AYWB_252 64 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 85057674 Pathogen - hypothetical protein AYWB_394 2 None None None 85057590 Common csdB cysteine desulfhydrase AYWB_310 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 85057801 Common rplD 50S ribosomal protein L4 AYWB_521 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 85057760 Common gpsA glycerol-3-phosphate dehydrogenase [NAD(P)+] AYWB_480 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 85057734 Common gidB glucose inhibited division protein B AYWB_454 169 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 85057308 Common evbG multidrug resistance ABC transporter ATP-binding and permease protein AYWB_028 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 85057608 Pathogen - hypothetical protein AYWB_328 1 None None None 85057522 Common mgtB Mg(2+) transport ATPase, P-type AYWB_242 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 85057316 Pathogen - hypothetical protein AYWB_036 2 None None None 85057565 Common dnaG DNA primase AYWB_285 161 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057387 Common rpoD RNA polymerase sigma factor RpoD AYWB_107 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 162139696 Common rplA 50S ribosomal protein L1 AYWB_464 242 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 85057551 Common ssb single-stranded DNA binding protein AYWB_271 22 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057844 Pathogen - hypothetical protein AYWB_564 1 None None None 85057323 Common - hypothetical protein AYWB_043 16 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057941 Pathogen rpmI LSU ribosomal protein L35P AYWB_661 3 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 85057741 Common rpoB DNA-directed RNA polymerase subunit beta AYWB_461 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 85057696 Common alaS alanyl-tRNA synthetase AYWB_416 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057839 Pathogen - hypothetical protein AYWB_559 2 None None None 85057753 Common rnpA ribonuclease P AYWB_473 17 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 85057939 Pathogen - hypothetical protein AYWB_659 2 None None None 85057848 Pathogen - hypothetical protein AYWB_568 1 None None None 85057281 Common dnaA chromosomal replication initiation protein AYWB_001 214 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 85057450 Pathogen - hypothetical protein AYWB_170 2 COG1223 COG1223, Predicted ATPase (AAA+ superfamily) General function prediction only 85057397 Common dnaX DNA polymerase III, gamma/tau subunit AYWB_117 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 85057662 Pathogen - hypothetical protein AYWB_382 2 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057656 Pathogen - hypothetical protein AYWB_376 2 None None None 85057932 Common - hypothetical protein AYWB_652 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 85057911 Pathogen - hypothetical protein AYWB_631 2 None None None 85057920 Pathogen - hypothetical protein AYWB_640 2 None None None 85057644 Pathogen - fragment of Tra5 transposase AYWB_364 2 None None None 85057574 Pathogen - hypothetical protein AYWB_294 1 None None None 85057907 Common rpmA 50S ribosomal protein L27 AYWB_627 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 85057347 Common nei formamidopyrimidine-DNA glycosylase AYWB_067 180 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 85057838 Pathogen - hypothetical protein AYWB_558 2 None None None 85057488 Common - hypothetical protein AYWB_208 35 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 85057633 Common - hypothetical protein AYWB_353 18 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057729 Pathogen - hypothetical protein AYWB_449 2 None None None 85057583 Pathogen - hypothetical protein AYWB_303 1 None None None 85057432 Pathogen - hypothetical protein AYWB_152 1 None None None 85057898 Pathogen - hypothetical protein AYWB_618 2 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 85057295 Common cbiQ ABC-type cobalt transport system, permease component CbiQ AYWB_015 12 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 85057401 Common psd phosphatidylserine decarboxylase AYWB_121 84 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 85057780 Common map methionine aminopeptidase AYWB_500 244 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 85057360 Pathogen - hypothetical protein AYWB_080 1 None None None 85057414 Common pheT phenylalanyl-tRNA synthetase beta chain AYWB_134 244 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 85057719 Common norM Na+ driven multidrug efflux pump AYWB_439 4 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 85057795 Common rplP 50S ribosomal protein L16 AYWB_515 219 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 85057672 Pathogen - hypothetical protein AYWB_392 1 None None None 85057410 Common - hypothetical protein AYWB_130 26 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 85057702 Pathogen - hypothetical protein AYWB_422 2 None None None 85057789 Common rpsN 30S ribosomal protein S14 AYWB_509 209 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 85057436 Pathogen - hypothetical protein AYWB_156 2 None None None 85057886 Common codA cytosine deaminase AYWB_606 211 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 85057628 Pathogen - hypothetical protein AYWB_348 2 None None None 85057384 Common hit asymmetrical bis(5'-nucleosyl)-tetraphosphatase AYWB_104 224 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 85057512 Common ssb single-stranded DNA binding protein AYWB_232 42 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057870 Common rluA ribosomal large subunit pseudouridine synthase D AYWB_590 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 85057942 Common infC bacterial protein translation initiation factor 3 AYWB_662 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 85057635 Common - hypothetical protein AYWB_355 3 None None None 85057877 Common trmU tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase AYWB_597 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 85057519 Pathogen - hypothetical protein AYWB_239 2 None None None 85057769 Common metG methionyl-tRNA synthetase AYWB_489 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057541 Common - hypothetical protein AYWB_261 7 None None None 85057858 Common udk uridine kinase AYWB_578 47 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 85057336 Pathogen - hypothetical protein AYWB_056 1 None None None 85057405 Common artM ABC transporter, bacterial extracellular solute-binding protein AYWB_125 164 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057824 Pathogen - hypothetical protein AYWB_544 2 None None None 85057786 Common rplR 50S ribosomal protein L18 AYWB_506 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 85057825 Common gapA glyceraldehyde-3-phosphate dehydrogenase AYWB_545 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 85057883 Common rpmB 50S ribosomal protein L28 AYWB_603 39 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 85057683 Pathogen - hypothetical protein AYWB_403 2 None None None 85057467 Common hflB ATP-dependent Zn protease AYWB_187 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057913 Common rpsT 30S ribosomal protein S20 AYWB_633 25 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 85057496 Pathogen - hypothetical protein AYWB_216 2 None None None 85057315 Pathogen - hypothetical protein AYWB_035 2 None None None 85057386 Common - hypothetical protein AYWB_106 17 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 85057529 Common - hypothetical protein AYWB_249 49 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 85057324 Pathogen - hypothetical protein AYWB_044 2 None None None 162139695 Common rplF 50S ribosomal protein L6 AYWB_507 241 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 85057843 Pathogen - hypothetical protein AYWB_563 1 None None None 85057804 Common rpsJ 30S ribosomal protein S10 AYWB_524 246 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 85057296 Pathogen - hypothetical protein AYWB_016 2 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 85057746 Common nusG transcription antitermination protein nusG AYWB_466 215 COG0250 NusG, Transcription antiterminator Transcription 85057564 Common dnaB replicative DNA helicase AYWB_284 211 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057716 Common gpmI phosphoglyceromutase AYWB_436 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 85057454 Common - hypothetical protein AYWB_174 9 None None None 85057329 Pathogen - hypothetical protein AYWB_049 2 None None None 85057778 Common rpmJ 50S ribosomal protein L36 AYWB_498 10 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 85057904 Common znuA ABC-type Mn/Zn transport system, periplasmic Mn/Zn-binding protein AYWB_624 121 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 85057752 Common yidC 60 kDa inner membrane protein AYWB_472 132 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 85057737 Common fusA elongation factor G AYWB_457 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 85057865 Common rpsO 30S ribosomal protein S15 AYWB_585 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 85057681 Pathogen - hypothetical protein AYWB_401 1 None None None 85057568 Common mgs1 recombination factor protein RarA AYWB_288 235 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 85057675 Common - hypothetical protein AYWB_395 2 None None None 85057591 Common iscU IscU protein AYWB_311 89 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 85057589 Common tyrS tyrosyl-tRNA synthetase AYWB_309 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057599 Pathogen - hypothetical protein AYWB_319 1 None None None 85057770 Common tpm tetrapyrrole (Corrin/Porphyrin) methylase AYWB_490 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 85057607 Common nusB N utilization substance protein B AYWB_327 57 COG0781 NusB, Transcription termination factor Transcription 85057559 Pathogen - hypothetical protein AYWB_279 2 None None None 85057451 Pathogen - hypothetical protein AYWB_171 1 None None None 85057493 Common hflB ATP-dependent Zn protease AYWB_213 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057573 Pathogen - hypothetical protein AYWB_293 2 None None None 85057632 Pathogen - hypothetical protein AYWB_352 3 None None None 85057919 Pathogen - hypothetical protein AYWB_639 2 None None None 85057645 Common - hypothetical protein AYWB_365 122 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 85057600 Common - hypothetical protein AYWB_320 169 COG0344 COG0344, Predicted membrane protein Function unknown 85057487 Common - hypothetical protein AYWB_207 5 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 85057350 Common cspC cold shock protein AYWB_070 159 COG1278 CspC, Cold shock proteins Transcription 85057695 Common - dimethyladenosine transferase AYWB_415 5 COG3963 COG3963, Phospholipid N-methyltransferase Lipid metabolism 85057289 Common sua5 translation factor SUA5 protein AYWB_009 241 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 85057464 Common - hypothetical protein AYWB_184 40 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057657 Common himA DNA-binding protein HU AYWB_377 147 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057307 Common mscL large-conductance mechanosensitive channel AYWB_027 141 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 85057580 Pathogen - hypothetical protein AYWB_300 2 None None None 85057926 Common pduL propanediol utilisation protein PduL AYWB_646 36 COG4869 PduL, Propanediol utilization protein Secondary metabolites biosynthesis, transport, and catabolism 85057663 Pathogen - hypothetical protein AYWB_383 2 None None None 85057284 Common - hypothetical protein AYWB_004 12 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057897 Common dnaB replicative DNA helicase AYWB_617 211 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057890 Pathogen - hypothetical protein AYWB_610 1 None None None 85057533 Common - uncharacterised P-loop hydrolase AYWB_253 62 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 85057627 Pathogen - hypothetical protein AYWB_347 2 None None None 85057429 Pathogen - hypothetical protein AYWB_149 2 None None None 85057586 Common rpsP 30S ribosomal protein S16 AYWB_306 204 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 85057705 Common - hypothetical protein AYWB_425 11 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 85057931 Common norM Na+-driven multidrug efflux pump AYWB_651 52 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 85057449 Pathogen - hypothetical protein AYWB_169 2 None None None 85057396 Common glnS glutaminyl-tRNA synthetase AYWB_116 245 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 85057788 Common rpsH 30S ribosomal protein S8 AYWB_508 246 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 85057885 Common tdk thymidine kinase AYWB_605 90 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 85057437 Pathogen - hypothetical protein AYWB_157 1 None None None 85057413 Common pheS phenylalanyl-tRNA synthetase alpha chain AYWB_133 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 85057794 Pathogen rpmC 50S ribosomal protein L29 AYWB_514 2 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 85057552 Common himA DNA-binding protein HU AYWB_272 7 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057431 Pathogen - hypothetical protein AYWB_151 1 None None None 85057310 Pathogen - hypothetical protein AYWB_030 4 None None None 85057912 Common serS seryl-tRNA synthetase AYWB_632 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057815 Common ileS isoleucyl-tRNA synthetase AYWB_535 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057548 Pathogen - hypothetical protein AYWB_268 1 None None None 85057348 Common dnaB replication initiation and membrane attachment protein AYWB_068 16 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 85057682 Pathogen - hypothetical protein AYWB_402 2 None None None 85057803 Pathogen - hypothetical protein AYWB_523 1 None None None 85057676 Pathogen - hypothetical protein AYWB_396 1 None None None 85057732 Pathogen - hypothetical protein AYWB_452 2 None None None 85057701 Common - hypothetical protein AYWB_421 46 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 85057355 Pathogen - hypothetical protein AYWB_075 2 None None None 85057430 Common ssb single-stranded DNA binding protein AYWB_150 171 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057668 Pathogen - hypothetical protein AYWB_388 2 None None None 85057416 Common acoA pyruvate dehydrogenase E1 component alpha subunit AYWB_136 155 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 85057472 Common himA DNA-binding protein HU AYWB_192 7 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057684 Pathogen - hypothetical protein AYWB_404 1 None None None 85057762 Common cmk cytidylate kinase AYWB_482 206 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 85057509 Common hflB ATP-dependent Zn protease AYWB_229 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057888 Common cbf CMP-binding factor AYWB_608 46 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 85057524 Common degV DegV family protein AYWB_244 48 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 85057892 Common rve integrase AYWB_612 122 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 85057373 Common potC ABC-type spermidine/putrescine transport system, permease protein PotC AYWB_093 188 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 85057622 Pathogen - hypothetical protein AYWB_342 1 None None None 85057917 Pathogen - hypothetical protein AYWB_637 2 None None None 85057453 Pathogen - hypothetical protein AYWB_173 2 None None None 85057391 Common - predicted metal-dependent hydrolase AYWB_111 200 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 85057943 Common thrS threonyl-tRNA synthetase AYWB_663 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057587 Common trmD tRNA (Guanine-N1) -methyltransferase AYWB_307 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 85057538 Pathogen - hypothetical protein AYWB_258 1 None None None 85057790 Common rplE 50S ribosomal protein L5 AYWB_510 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 85057905 Pathogen - hypothetical protein AYWB_625 2 None None None 85057866 Common - hypothetical protein AYWB_586 20 COG3870 COG3870, Uncharacterized protein conserved in bacteria Function unknown 85057383 Common rnhC ribonuclease HIII AYWB_103 29 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 85057575 Pathogen - hypothetical protein AYWB_295 2 None None None 85057440 Pathogen - hypothetical protein AYWB_160 1 None None None 85057341 Common dnaK molecular chaperone DnaK AYWB_061 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 85057799 Common rplB 50S ribosomal protein L2 AYWB_519 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 85057379 Common degV DegV family protein AYWB_099 50 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 85057638 Pathogen - hypothetical protein AYWB_358 2 None None None 85057491 Pathogen - hypothetical protein AYWB_211 1 None None None 85057685 Pathogen - hypothetical protein AYWB_405 1 None None None 85057465 Pathogen - hypothetical protein AYWB_185 1 COG0628 PerM, Predicted permease General function prediction only 85057938 Common ysdC endo-1,4-beta-glucanase AYWB_658 90 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 85057433 Pathogen - hypothetical protein AYWB_153 1 None None None 85057654 Common - hypothetical protein AYWB_374 30 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057727 Common - hypothetical protein AYWB_447 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 85057303 Pathogen - hypothetical protein AYWB_023 2 None None None 85057545 Common artQ ABC-type amino acid transport system, permease component AYWB_265 150 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057298 Common mgtA cation transport ATPase AYWB_018 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 85057339 Common hrcA heat-inducible transcription repressor AYWB_059 150 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 85057581 Pathogen - hypothetical protein AYWB_301 2 None None None 85057421 Pathogen - hypothetical protein AYWB_141 2 None None None 85057925 Pathogen - hypothetical protein AYWB_645 1 None None None 85057356 Pathogen - hypothetical protein AYWB_076 2 None None None 85057592 Common trpS tryptophanyl-tRNA synthetase AYWB_312 225 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057776 Common rpsK 30S ribosomal protein S11 AYWB_496 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 85057816 Common - translation-associated GTPase AYWB_536 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 85057947 Common malE putative maltose/maltodextrin-binding protein MalE AYWB_667 16 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 85057417 Common acoB pyruvate dehydrogenase E1 component beta subunit AYWB_137 191 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 85057362 Pathogen - hypothetical protein AYWB_082 2 None None None 85057649 Pathogen - hypothetical protein AYWB_369 2 None None None 85057349 Common dnaC DNA replication protein DnaC AYWB_069 31 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 85057434 Pathogen - hypothetical protein AYWB_154 2 None None None 85057412 Pathogen - hypothetical protein AYWB_132 2 None None None 85057325 Pathogen - hypothetical protein AYWB_045 3 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 85057785 Common rpsE 30S ribosomal protein S5 AYWB_505 244 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 162139694 Common rplU 50S ribosomal protein L21 AYWB_629 194 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 85057601 Common lig NAD-dependent DNA ligase AYWB_321 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 85057369 Pathogen - hypothetical protein AYWB_089 2 None None None 85057867 Common - methionine transport ATP-binding protein AYWB_587 83 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 85057494 Common - hypothetical protein AYWB_214 30 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057484 Pathogen - hypothetical protein AYWB_204 1 None None None 85057480 Pathogen - hypothetical protein AYWB_200 2 None None None 85057755 Common proS prolyl-tRNA synthetase AYWB_475 237 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057836 Common ung uracil-DNA glycosylase AYWB_556 130 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 85057537 Pathogen - hypothetical protein AYWB_257 1 None None None 85057283 Common rpsF 30S ribosomal protein S6 AYWB_003 80 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 85057823 Pathogen - hypothetical protein AYWB_543 2 None None None 85057846 Common tlyC hymolysin-related protein AYWB_566 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 85057334 Common srmB superfamily II DNA and RNA helicase AYWB_054 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 85057408 Common lysU lysyl-tRNA synthetase AYWB_128 245 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 85057764 Common truB tRNA pseudouridine synthase B AYWB_484 241 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 85057518 Pathogen - hypothetical protein AYWB_238 1 None None None 85057910 Common - hypothetical protein AYWB_630 121 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 85057612 Common pmbA PmbA protein AYWB_332 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 85057944 Common - exopolyphosphatase-related protein AYWB_664 74 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 85057476 Pathogen - hypothetical protein AYWB_196 2 None None None 85057320 Pathogen - hypothetical protein AYWB_040 2 None None None 85057733 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA AYWB_453 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 85057452 Pathogen - hypothetical protein AYWB_172 2 None None None 85057697 Pathogen - hypothetical protein AYWB_417 1 None None None 85057479 Pathogen - hypothetical protein AYWB_199 2 None None None 85057525 Pathogen - hypothetical protein AYWB_245 2 None None None 85057456 Pathogen - hypothetical protein AYWB_176 2 None None None 85057285 Common rpsR 30S ribosomal protein S18 AYWB_005 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 85057899 Common phnL ABC-type transport system, ATPase component AYWB_619 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 85057797 Common rplV 50S ribosomal protein L22 AYWB_517 217 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 85057311 Pathogen - hypothetical protein AYWB_031 4 None None None 85057523 Common - hypothetical protein AYWB_243 68 COG1624 COG1624, Uncharacterized conserved protein Function unknown 85057891 Pathogen - hypothetical protein AYWB_611 2 None None None 85057761 Common engA GTP-binding protein EngA AYWB_481 226 COG1160 COG1160, Predicted GTPases General function prediction only 85057710 Common thyA thymidylate synthase AYWB_430 143 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 85057851 Common - hypothetical protein AYWB_571 5 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 85057887 Common pcnB poly(A) polymerase AYWB_607 211 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 85057918 Pathogen - hypothetical protein AYWB_638 2 None None None 85057621 Pathogen - hypothetical protein AYWB_341 2 None None None 85057619 Pathogen - hypothetical protein AYWB_339 2 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 85057677 Common nfnB nitroreductase AYWB_397 75 COG0778 NfnB, Nitroreductase Energy production and conversion 85057669 Pathogen - hypothetical protein AYWB_389 5 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057372 Common potD spermidine/putrescine-binding protein AYWB_092 119 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 85057817 Common - GTPase AYWB_537 163 COG1162 COG1162, Predicted GTPases General function prediction only 85057301 Pathogen - hypothetical protein AYWB_021 2 None None None 85057806 Pathogen - hypothetical protein AYWB_526 4 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057735 Common - hypothetical protein AYWB_455 17 COG4760 COG4760, Predicted membrane protein Function unknown 85057924 Pathogen - hypothetical protein AYWB_644 1 None None None 85057700 Common greA transcription elongation factor GreA AYWB_420 199 COG0782 GreA, Transcription elongation factor Transcription 85057660 Common rpoD RNA polymerase sigma factor AYWB_380 29 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 85057546 Pathogen - hypothetical protein AYWB_266 2 None None None 85057631 Pathogen - hypothetical protein AYWB_351 1 None None None 85057411 Pathogen - hypothetical protein AYWB_131 1 None None None 85057609 Pathogen - hypothetical protein AYWB_329 2 None None None 85057930 Common zntA cation uptake P-type ATPase AYWB_650 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 85057460 Pathogen - hypothetical protein AYWB_180 2 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 85057837 Pathogen - hypothetical protein AYWB_557 2 None None None 85057937 Common acpP acyl carrier protein AYWB_657 88 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 85057473 Common ssb single-stranded DNA binding protein AYWB_193 25 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057390 Common era GTP-binding protein Era AYWB_110 224 COG1159 Era, GTPase General function prediction only 85057462 Common - hypothetical protein AYWB_182 9 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 85057610 Common lepA GTP-binding protein LepA AYWB_330 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 85057655 Common - hypothetical protein AYWB_375 239 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057539 Pathogen - hypothetical protein AYWB_259 2 None None None 85057602 Common - hypothetical protein AYWB_322 34 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 85057382 Pathogen - hypothetical protein AYWB_102 2 None None None 85057492 Pathogen - hypothetical protein AYWB_212 2 None None None 85057500 Common dnaB replicative DNA helicase AYWB_220 212 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057444 Pathogen - hypothetical protein AYWB_164 1 None None None 85057427 Pathogen - hypothetical protein AYWB_147 1 None None None 85057340 Common grpE molecular chaperone GrpE protein AYWB_060 136 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 85057361 Pathogen - hypothetical protein AYWB_081 2 None None None 85057435 Pathogen - hypothetical protein AYWB_155 2 None None None 85057481 Pathogen - hypothetical protein AYWB_201 1 None None None 85057371 Pathogen - hypothetical protein AYWB_091 2 None None None 85057648 Pathogen - hypothetical protein AYWB_368 2 None None None 85057485 Pathogen - hypothetical protein AYWB_205 1 None None None 85057784 Common rpmD 50S ribosomal protein L30 AYWB_504 50 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 85057868 Common nlpA ABC-type methionine transport system, periplasmic component AYWB_588 5 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 85057368 Pathogen - hypothetical protein AYWB_088 2 None None None 85057385 Pathogen - hypothetical protein AYWB_105 1 None None None 85057550 Pathogen - hypothetical protein AYWB_270 1 None None None 85057290 Common holA DNA polymerase III, delta subunit AYWB_010 15 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 85057357 Pathogen - hypothetical protein AYWB_077 3 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 85057304 Pathogen - hypothetical protein AYWB_024 2 None None None 85057754 Common rpmH 50S ribosomal protein L34 AYWB_474 186 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 85057593 Common polC DNA polymerase III alpha subunit AYWB_313 181 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 85057798 Common rpsS 30S ribosomal protein S19 AYWB_518 225 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 85057948 Common malG ABC-type maltose transport system, permease protein MalG AYWB_668 144 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 85057517 Pathogen - hypothetical protein AYWB_237 1 None None None 85057678 Common uvrC excinuclease ABC subunit C AYWB_398 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 85057426 Pathogen - hypothetical protein AYWB_146 2 None None None 85057842 Pathogen - hypothetical protein AYWB_562 2 None None None 85057620 Pathogen - hypothetical protein AYWB_340 2 None None None 85057711 Common pepD dipeptidase PepV AYWB_431 115 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 85057422 Common plsX fatty acid/phospholipid synthesis protein AYWB_142 176 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 85057478 Pathogen - hypothetical protein AYWB_198 2 None None None 85057902 Common mntB ABC-type Mn/Zn transport system, membrane protein AYWB_622 185 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 85057805 Pathogen rpmF 50S ribosomal protein L32 AYWB_525 2 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 85057326 Pathogen - hypothetical protein AYWB_046 2 None None None 85057726 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase AYWB_446 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 85057286 Common - exopolyphosphatase-related protein AYWB_006 105 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 85057393 Common - hypothetical protein AYWB_113 11 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 85057822 Common oepF oligoendopeptidase F AYWB_542 60 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 85057747 Pathogen secE preprotein translocase subunit SecE AYWB_467 2 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 85057333 Common pgsA CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase AYWB_053 204 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 85057847 Common pth peptidyl-tRNA hydrolase AYWB_567 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 85057834 Common rpsB 30S ribosomal protein S2 AYWB_554 232 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 85057945 Common trmE tRNA modification GTPase TrmE AYWB_665 222 COG0486 ThdF, Predicted GTPase General function prediction only 85057442 Pathogen - hypothetical protein AYWB_162 2 COG5280 COG5280, Phage-related minor tail protein Function unknown 85057415 Common phnL ABC transporter ATP-binding protein AYWB_135 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 85057611 Common tldD TldD protein AYWB_331 163 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 85057703 Pathogen - hypothetical protein AYWB_423 2 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 85057447 Pathogen - hypothetical protein AYWB_167 2 None None None 85057603 Common acpS holo-[acyl-carrier-protein] synthase AYWB_323 7 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 85057818 Common glyA serine hydroxymethyltransferase AYWB_538 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 85057706 Pathogen - hypothetical protein AYWB_426 2 None None None 85057640 Common - hypothetical protein AYWB_360 13 None None None 85057859 Common cysS cysteinyl-tRNA synthetase AYWB_579 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057489 Pathogen - hypothetical protein AYWB_209 2 None None None 85057903 Common mntA ABC-type Mn/Zn transport system, ATP-binding protein AYWB_623 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 85057317 Pathogen - hypothetical protein AYWB_037 3 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 85057554 Pathogen - hypothetical protein AYWB_274 1 None None None 85057636 Pathogen - hypothetical protein AYWB_356 2 None None None 85057536 Pathogen - hypothetical protein AYWB_256 1 None None None 85057468 Pathogen - hypothetical protein AYWB_188 2 None None None 85057313 Pathogen - hypothetical protein AYWB_033 2 None None None 85057936 Common leuS leucyl-tRNA synthetase AYWB_656 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057463 Pathogen - fragment of ATP-dependent Zn protease AYWB_183 2 None None None 85057691 Pathogen - hypothetical protein AYWB_411 1 None None None 85057461 Common tmk thymidylate kinase AYWB_181 178 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 85057666 Pathogen - hypothetical protein AYWB_386 2 None None None 85057570 Pathogen - hypothetical protein AYWB_290 2 None None None 85057923 Pathogen - hypothetical protein AYWB_643 2 None None None 85057637 Pathogen - hypothetical protein AYWB_357 2 None None None 85057773 Common truA tRNA pseudouridine synthase A AYWB_493 223 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 85057309 Common evbH multidrug resistance ABC transporter ATP-binding and permease protein AYWB_029 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 85057577 Pathogen - hypothetical protein AYWB_297 2 None None None 85057661 Pathogen - hypothetical protein AYWB_381 2 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 85057544 Common artP ABC-type polar amino acid transport system, ATPase component AYWB_264 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 85057722 Common topA DNA topoisomerase AYWB_442 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 85057381 Common - predicted hydrolase of the metallo-beta-lactamase superfamily AYWB_101 152 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 85057850 Common infB translation initiation factor IF-2 AYWB_570 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 85057470 Pathogen - hypothetical protein AYWB_190 1 None None None 85057715 Common citS citrate-sodium symport AYWB_435 28 COG3493 CitS, Na+/citrate symporter Energy production and conversion 85057894 Pathogen - hypothetical protein AYWB_614 2 None None None 85057819 Common cbiQ ABC-type cobalt transport protein CbiQ AYWB_539 41 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 85057353 Pathogen - hypothetical protein AYWB_073 2 None None None 85057337 Pathogen - hypothetical protein AYWB_057 1 None None None 85057852 Common nusA transcription elongation factor NusA AYWB_572 218 COG0195 NusA, Transcription elongation factor Transcription 85057624 Common - hypothetical protein AYWB_344 14 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 85057915 Common - ABC-type amino acid transport system, permease and periplasmic component AYWB_635 166 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057388 Common dnaG DNA primase AYWB_108 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057841 Common hlyC hemolysin III AYWB_561 112 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 85057879 Pathogen - immunodominant membrane protein precursor AYWB_599 2 None None None 85057614 Common tig trigger factor, PPIase AYWB_334 213 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 85057946 Common - exopolyphosphatase-related protein AYWB_666 74 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 85057378 Common - Zn-dependent hydrolase AYWB_098 150 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 85057443 Pathogen - hypothetical protein AYWB_163 2 None None None 85057792 Common rplN 50S ribosomal protein L14 AYWB_512 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 85057516 Pathogen - hypothetical protein AYWB_236 2 None None None 85057872 Common mesJ cell cycle protein MesJ AYWB_592 168 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 85057686 Pathogen - hypothetical protein AYWB_406 2 None None None 85057821 Common cbiO cobalt transport ATP-binding protein cbiO AYWB_541 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 85057471 Pathogen - hypothetical protein AYWB_191 2 None None None 85057679 Common uvrB excinuclease ABC subunit B AYWB_399 228 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 85057423 Common rnc dsRNA-specific ribonuclease AYWB_143 216 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 85057505 Pathogen - hypothetical protein AYWB_225 2 None None None 85057327 Pathogen - hypothetical protein AYWB_047 2 None None None 85057712 Pathogen - hypothetical protein AYWB_432 2 None None None 85057774 Common rplQ 50S ribosomal protein L17 AYWB_494 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 85057731 Pathogen - hypothetical protein AYWB_451 1 None None None 85057766 Pathogen - hypothetical protein AYWB_486 2 None None None 85057332 Common citS malate-sodium symport AYWB_052 30 COG3493 CitS, Na+/citrate symporter Energy production and conversion 85057949 Common malF maltose transport system permease protein MalF AYWB_669 162 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 85057557 Common - hypothetical protein AYWB_277 91 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 85057831 Common frr ribosome recycling factor AYWB_551 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 85057687 Pathogen - hypothetical protein AYWB_407 2 None None None 85057692 Common lplA lipoate-protein ligase A AYWB_412 74 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 85057561 Pathogen - hypothetical protein AYWB_281 2 None None None 85057829 Common tpiA triosephophate isomerase AYWB_549 219 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 85057738 Common rpsG 30S ribosomal protein S7 AYWB_458 242 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 85057543 Common artI ABC-type amino acid transport system, solute-binding protein AYWB_263 114 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 85057365 Common uvrD UvrD helicase AYWB_085 102 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 85057748 Common spoU 23S rRNA methyltransferase AYWB_468 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 85057455 Common tra5 Tra5 transposase AYWB_175 121 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 85057853 Common - hypothetical protein AYWB_573 18 None None None 85057641 Common - hypothetical protein AYWB_361 103 None None None 85057377 Common - hypothetical protein AYWB_097 11 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057526 Common - hypothetical protein AYWB_246 212 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 85057820 Common cbiO cobalt transport ATP-binding protein cbiO AYWB_540 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 85057840 Common ackA acetate kinase AYWB_560 161 COG0282 ackA, Acetate kinase Energy production and conversion 85057647 Pathogen - hypothetical protein AYWB_367 2 None None None 85057808 Common dppD dipeptide transport ATP-binding protein DppD AYWB_528 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 85057441 Pathogen - hypothetical protein AYWB_161 2 None None None 85057354 Common tmk thymidylate kinase AYWB_074 147 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 85057725 Common efp protein translation elongation factor P AYWB_445 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 85057469 Pathogen - hypothetical protein AYWB_189 2 None None None 85057392 Common rpsU 30S ribosomal protein S21 AYWB_112 77 None None None 85057482 Pathogen - hypothetical protein AYWB_202 1 None None None 85057555 Common hflB ATP-dependent Zn protease AYWB_275 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 85057508 Pathogen - hypothetical protein AYWB_228 2 None None None 85057833 Common tsf elongation factor Ts AYWB_553 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 85057646 Pathogen - hypothetical protein AYWB_366 1 None None None 85057576 Pathogen - hypothetical protein AYWB_296 2 None None None 85057709 Common folA dihydrofolate reductase AYWB_429 144 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 85057935 Common gmk guanylate kinase AYWB_655 212 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 85057344 Common ftsY signal recognition particle, docking protein FtsY AYWB_064 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 85057724 Pathogen - hypothetical protein AYWB_444 2 None None None 85057448 Pathogen - hypothetical protein AYWB_168 1 None None None 85057446 Pathogen - hypothetical protein AYWB_166 2 None None None 85057690 Pathogen - hypothetical protein AYWB_410 1 None None None 85057604 Common hcaD NADH oxidase H2O2-forming AYWB_324 242 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 85057929 Common spoVG regulatory protein SpoVG AYWB_649 24 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 85057425 Pathogen - hypothetical protein AYWB_145 3 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 85057782 Common secY preprotein translocase subunit SecY AYWB_502 226 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 85057342 Common dnaJ molecular chaperone DnaJ AYWB_062 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 85057364 Pathogen - hypothetical protein AYWB_084 4 None None None 85057639 Common rpoD RNA polymerase sigma factor AYWB_359 13 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 85057880 Common groEL chaperonin GroEL AYWB_600 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 85057458 Common dnaG DNA primase AYWB_178 151 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057380 Common cof putative hydrolase of the HAD superfamily AYWB_100 46 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 85057916 Pathogen - hypothetical protein AYWB_636 2 None None None 85057490 Common himA DNA-binding protein HU AYWB_210 162 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 85057623 Pathogen - hypothetical protein AYWB_343 2 None None None 85057889 Pathogen - fragment of IscU protein AYWB_609 2 None None None 85057314 Pathogen - hypothetical protein AYWB_034 1 None None None 85057893 Pathogen - hypothetical protein AYWB_613 2 None None None 85057584 Common secA preprotein translocase subunit SecA AYWB_304 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 85057370 Common - predicted kinase related to dihydroxyacetone kinase AYWB_090 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 85057667 Pathogen - hypothetical protein AYWB_387 2 None None None 85057777 Common rpsM 30S ribosomal protein S13 AYWB_497 240 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 85057811 Common dppC ABC-type dipeptide transport system, permease protein DppC AYWB_531 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 85057807 Common dppF dipeptide transport ATP-binding protein DppF AYWB_527 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 85057749 Common mgtA cation transport ATPase AYWB_469 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 85057713 Pathogen - hypothetical protein AYWB_433 2 None None None 85057908 Common - hypothetical protein AYWB_628 7 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 85057832 Common pyrH uridylate kinase AYWB_552 231 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 85057328 Pathogen - hypothetical protein AYWB_048 3 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 85057331 Common sfcA NAD-dependent malic enzyme AYWB_051 202 COG0281 SfcA, Malic enzyme Energy production and conversion 85057835 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase AYWB_555 148 COG0756 Dut, dUTPase Nucleotide transport and metabolism 85057765 Common trxA thioredoxin AYWB_485 229 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 85057556 Pathogen - hypothetical protein AYWB_276 2 None None None 85057791 Common rplX LSU ribosomal protein L24P AYWB_511 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 85057420 Common tatD Mg-dependent DNase AYWB_140 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 85057861 Common rpsI 30S ribosomal protein S9 AYWB_581 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 85057613 Common lon ATP-dependent protease La AYWB_333 210 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 85057871 Common ftsH cell division protein ftsH homolog AYWB_591 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 85057688 Pathogen - hypothetical protein AYWB_408 1 None None None 85057424 Common - hypothetical protein AYWB_144 15 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 85057854 Common smpB SsrA-binding protein AYWB_574 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 85057560 Pathogen - hypothetical protein AYWB_280 2 None None None 85057783 Common rplO 50S ribosomal protein L15 AYWB_503 178 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 85057297 Common ibpA molecular chaperone AYWB_017 104 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 85057845 Common priA primosomal protein N' AYWB_565 206 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 85057292 Common valS valyl-tRNA synthetase AYWB_012 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 85057376 Common hflB ATP-dependent zinc metallopeptidase FtsH AYWB_096 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 85057763 Common rsuA 16S rRNA pseudouridylate synthase AYWB_483 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 85057745 Common rplK 50S ribosomal protein L11 AYWB_465 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 85057698 Common yqgF Holliday junction resolvase AYWB_418 82 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 85057810 Common dppB ABC-type dipeptide transport system, permease protein DppB AYWB_530 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 85057730 Common rmuC RmuC family protein AYWB_450 103 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 85057302 Pathogen - hypothetical protein AYWB_022 1 None None None 85057742 Common rplL 50S ribosomal protein L7/L12 AYWB_462 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 85057319 Pathogen - hypothetical protein AYWB_039 2 None None None 85057483 Pathogen - hypothetical protein AYWB_203 2 None None None 85057756 Common rpmG 50S ribosomal protein L33 AYWB_476 80 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 85057652 Pathogen - hypothetical protein AYWB_372 1 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 85057343 Pathogen - hypothetical protein AYWB_063 1 None None None 85057363 Pathogen - hypothetical protein AYWB_083 2 COG5280 COG5280, Phage-related minor tail protein Function unknown 85057409 Common dnaE DNA polymerase III alpha subunit AYWB_129 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 85057418 Common aceF branched-chain alpha-keto acid dehydrogenase subunit E2 AYWB_138 196 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 85057800 Common rplW 50S ribosomal protein L23 AYWB_520 216 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 85057595 Common glnP ABC-type amino acid ABC transporter, permease component AYWB_315 168 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 85057708 Common plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase AYWB_428 42 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism