Brucella melitensis biovar Abortus 2308 chromosome I, complete sequence NC_007618 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 82700659 Common - Family of unknown function DUF589 BAB1_1891 94 COG2947 COG2947, Uncharacterized conserved protein Function unknown 82699974 Common pyrG CTP synthetase BAB1_1157 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 82700503 Common - Uridine kinase:ABC transporter, transmembrane region:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Phospho... BAB1_1727 247 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 82700847 Pathogen - hypothetical protein BAB1_2095 1 None None None 82699904 Common - Thiosulfate sulfurtransferase:Rhodanese-like BAB1_1075 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 82700931 Common - enoyl-CoA hydratase BAB1_2185 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 82700650 Common - hypothetical protein BAB1_1881 78 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 82700699 Common ftsY GTP-binding signal recognition particle (SRP54) G-domain:ATP/GTP-binding site motif A (P-loop):AAA ATPase:Cell division trans... BAB1_1934 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 82700315 Common greA transcription elongation factor GreA BAB1_1523 203 COG0782 GreA, Transcription elongation factor Transcription 82699039 Common - 3'-5' exonuclease BAB1_0117 107 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 82700028 Common - Tetracycline resistance protein TetB BAB1_1216 92 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 82700442 Common - RNA polymerase factor sigma-32 BAB1_1665 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 82700331 Common - ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein, C-term... BAB1_1539 212 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82699335 Common - ATP/GTP-binding site motif A (P-loop):Cold-shock DNA-binding domain BAB1_0449 176 COG1278 CspC, Cold shock proteins Transcription 82699151 Common - ATP/GTP-binding site motif A (P-loop):Fumarylacetoacetate (FAA) hydrolase BAB1_0247 180 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 82698941 Common - Bacterial extracellular solute-binding protein, family 5 BAB1_0009 120 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 82700743 Common lysA Orn/DAP/Arg decarboxylase, family 2:ATP/GTP-binding site motif A (P-loop):Diaminopimelate decarboxylase BAB1_1984 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 82700321 Common - Bacterial SH3-like region BAB1_1529 16 COG4991 COG4991, Uncharacterized protein with a bacterial SH3 domain homologue Function unknown 82699779 Common - TPR repeat BAB1_0928 94 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 82699327 Common - GGDEF BAB1_0441 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 82700115 Common cobI precorrin-2 C(20)-methyltransferase BAB1_1306 185 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 82699952 Common - ATP/GTP-binding site motif A (P-loop):GTP1/OBG BAB1_1133 219 COG2262 HflX, GTPases General function prediction only 82700736 Common - hypothetical protein BAB1_1977 14 None None None 82700238 Common recN ATP/GTP-binding site motif A (P-loop):ABC transporter:DNA repair protein RecN BAB1_1440 199 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 82699675 Pathogen - hypothetical protein BAB1_0818 1 None None None 82699240 Common - Na+/solute symporter:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sen... BAB1_0346 228 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 82699900 Pathogen - hypothetical protein BAB1_1071 1 None None None 82699496 Common - Response regulator receiver:Transcriptional regulatory protein, C terminal:Sugar transporter superfamily BAB1_0628 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82699435 Common - IS5 family element, transposase orfB BAB1_0555 56 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82700490 Common ruvB Holliday junction DNA helicase B BAB1_1714 229 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 82699426 Common - ISBm1, transposase orfA BAB1_0546 78 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82700106 Common - hypothetical protein BAB1_1297 18 COG3553 COG3553, Uncharacterized protein conserved in bacteria Function unknown 82699708 Common - Tetracycline resistance protein TetB:Drug resistance transporter Bcr/CflA subfamily:General substrate transporter:Major facil... BAB1_0854 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 82700392 Pathogen - hypothetical protein BAB1_1604 1 None None None 82700770 Common - hypothetical protein BAB1_2012 4 None None None 82700824 Common aroE shikimate 5-dehydrogenase BAB1_2070 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 82700776 Common - hypothetical protein BAB1_2020 8 None None None 82700047 Common secY preprotein translocase subunit SecY BAB1_1235 236 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 82698965 Common - Cytochrome c heme-binding site:Cytochrome c, class IA/ IB:Cytochrome c, class I:Cytochrome c, class IC BAB1_0036 57 COG3474 COG3474, Cytochrome c2 Energy production and conversion 82700657 Common gpsA Adrenodoxin reductase:NAD-dependent glycerol-3-phosphate dehydrogenase BAB1_1889 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 82700787 Pathogen - hypothetical protein BAB1_2031 2 None None None 82699403 Common - Disease resistance protein:ATP/GTP-binding site motif A (P-loop):Peptidase family S16:SMC protein, N-terminal:Structural main... BAB1_0522 175 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 82698980 Common - TonB-dependent receptor protein:Mrp family:ATP/GTP-binding site motif A (P-loop):Protein of unknown function DUF59 BAB1_0054 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 82699014 Common ccmB SecY protein:Cytochrome c-type biogenesis protein CcmB BAB1_0092 74 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 82700840 Common hisF imidazole glycerol phosphate synthase subunit HisF BAB1_2086 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 82699797 Common - Esterase/lipase/thioesterase, active site BAB1_0946 86 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 82699158 Common - hypothetical protein BAB1_0254 3 None None None 82699717 Common - hypothetical protein BAB1_0863 26 COG5467 COG5467, Uncharacterized conserved protein Function unknown 82700604 Common ffh Disease resistance protein:GTP-binding signal recognition particle (SRP54) G-domain:ATP/GTP-binding site motif A (P-loop):AAA... BAB1_1834 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 82699695 Common - Glyoxalase/Bleomycin resistance protein/dioxygenase domain BAB1_0838 92 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 82700696 Pathogen - hypothetical protein BAB1_1931 1 None None None 162002877 Common - Excinuclease ABC, C subunit, N-terminal:Helix-hairpin-helix motif:Excinuclease ABC, C subunit, C-terminal:UvrB/UvrC protein:H... BAB1_0720 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 82698952 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase BAB1_0023 231 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 82699210 Common pgi glucose-6-phosphate isomerase BAB1_0316 198 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 82700244 Common - Actin-binding, actinin-type:Cell division protein FtsQ BAB1_1446 77 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 82700496 Common - Sel1-like repeat BAB1_1720 101 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 82700110 Common radC DNA repair protein RadC BAB1_1301 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 82700123 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase:Uroporphiryn-III C-methyltransferase:Uroporphyrin-III C-... BAB1_1317 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 82700348 Common apt adenine phosphoribosyltransferase BAB1_1556 186 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 82700796 Common - Protein of unknown function DUF636 BAB1_2040 53 COG3791 COG3791, Uncharacterized conserved protein Function unknown 82700098 Common gloA Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I BAB1_1286 124 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 82699937 Common - Peptidyl-prolyl cis-trans isomerase, cyclophilin type BAB1_1118 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 82700587 Common leuS leucyl-tRNA synthetase BAB1_1815 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700717 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1957 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 82700091 Common - Bacterial transferase hexapeptide repeat BAB1_1279 212 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 82700433 Common - hypothetical protein BAB1_1656 49 COG1238 COG1238, Predicted membrane protein Function unknown 82700830 Common - MltA family BAB1_2076 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 82698994 Common - hypothetical protein BAB1_0068 25 COG4544 COG4544, Uncharacterized conserved protein Function unknown 82699510 Common - Protein of unknown function DUF6 BAB1_0642 100 COG2962 RarD, Predicted permeases General function prediction only 82700054 Common rpsN 30S ribosomal protein S14 BAB1_1242 205 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 82700383 Common - Substrate-binding region of ABC-type glycine betaine transport system BAB1_1593 61 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 82700894 Common - lipoprotein, putative BAB1_2148 6 None None None 82699666 Common - Cytochrome oxidase assembly BAB1_0807 47 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 82700354 Common - tRNA/rRNA methyltransferase (SpoU) BAB1_1562 162 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 82700805 Common - hypothetical protein BAB1_2051 21 None None None 82699500 Common ccmE cytochrome c-type biogenesis protein CcmE BAB1_0632 94 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 82699270 Common - Cytochrome c heme-binding site BAB1_0382 38 COG3748 COG3748, Predicted membrane protein Function unknown 82700872 Common - hypothetical protein BAB1_2125 16 None None None 82700131 Common cobO cob(I)yrinic acid a,c-diamide adenosyltransferase BAB1_1325 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 82699919 Common folE GTP cyclohydrolase I BAB1_1097 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 82700863 Common - tryptophan synthase subunit beta BAB1_2112 226 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 82700910 Common - hypothetical protein BAB1_2164 43 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 82700171 Pathogen - hypothetical protein BAB1_1372 1 None None None 82699163 Pathogen - hypothetical protein BAB1_0263 1 None None None 82700452 Common - DNA gyrase, subunit B BAB1_1675 12 None None None 82699068 Common ihfB integration host factor subunit beta BAB1_0152 210 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 82699799 Common - cysteine desulfurase activator complex subunit SufB BAB1_0948 186 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 82699536 Common - Uracil-DNA glycosylase superfamily BAB1_0668 62 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 82699843 Common - Thymidylate kinase:ATP/GTP-binding site motif A (P-loop) BAB1_1011 224 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 82700199 Pathogen - hypothetical protein BAB1_1401 1 None None None 82699940 Common gyrA DNA gyrase subunit A BAB1_1121 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 82699301 Common rnhB ribonuclease HII BAB1_0415 207 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 82700420 Common - Delayed-early response protein/equilibrative nucleoside transporter:Multiple antibiotic resistance (MarC)-related proteins BAB1_1638 32 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 82699368 Common fabD Acyl transferase domain:Malonyl CoA-acyl carrier protein transacylase BAB1_0482 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 82699922 Common - Phage integrase BAB1_1100 26 COG0582 XerC, Integrase DNA replication, recombination, and repair 82699450 Pathogen - hypothetical protein BAB1_0575 1 None None None 82700148 Common - Binding-protein-dependent transport systems inner membrane component:ATP/GTP-binding site motif A (P-loop):TrkA-N:Potassium e... BAB1_1345 210 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 82699112 Pathogen - hypothetical protein BAB1_0198 1 None None None 82699646 Common glyA serine hydroxymethyltransferase BAB1_0787 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 82700216 Common thyA thymidylate synthase BAB1_1418 144 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 82699134 Common - hypothetical protein BAB1_0227 11 COG5514 COG5514, Uncharacterized conserved protein Function unknown 82699356 Common pssA CDP-alcohol phosphatidyltransferase:CDP-diacylglycerol--serine O-phosphatidyltransferase BAB1_0470 141 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 82698948 Common - hydroxymethylglutaryl-CoA lyase BAB1_0017 97 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 82699225 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein BAB1_0331 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 82698975 Pathogen - hypothetical protein BAB1_0049 2 None None None 82699096 Common cysH phosphoadenosine phosphosulfate reductase BAB1_0182 153 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 82699503 Common - Serine protease, V8 family:Serine protease, trypsin family:PDZ/DHR/GLGF domain:HtrA/DegQ protease BAB1_0635 224 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 82700647 Common - nitrilase/cyanide hydratase/apolipoprotein N-acyltransferase BAB1_1878 199 COG0388 COG0388, Predicted amidohydrolase General function prediction only 82699875 Common - hypothetical protein BAB1_1043 123 COG1511 COG1511, Predicted membrane protein Function unknown 82699457 Common - Transcriptional regulator AbrB:SpoVT/AbrB-like domain BAB1_0582 3 COG2336 MazE, Growth regulator Signal transduction mechanisms 82700782 Pathogen - hypothetical protein BAB1_2026 1 None None None 82700165 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1364 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 82700259 Common - SLT domain BAB1_1461 109 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 82698987 Pathogen - hypothetical protein BAB1_0061 2 None None None 82700192 Common - NUDIX hydrolase BAB1_1394 11 None None None 82699097 Common - hypothetical protein BAB1_0183 54 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 82700225 Common - Alpha-isopropylmalate/homocitrate synthase:AsmA BAB1_1427 21 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 82700635 Pathogen - hypothetical protein BAB1_1865 1 None None None 82700919 Common fabB 3-oxoacyl-(acyl carrier protein) synthase I BAB1_2173 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82699078 Common - Heat shock protein Hsp20 BAB1_0162 64 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 82699816 Common - Membrane protein involved in aromatic hydrocarbon degradation BAB1_0967 42 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 82699514 Common - Endonuclease/exonuclease/phosphatase family BAB1_0646 25 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 82699388 Common - PAS domain:GGDEF:PAS-associated C-terminal domain:PAC motif:EAL domain BAB1_0507 180 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 82699759 Common - ATP/GTP-binding site motif A (P-loop) BAB1_0908 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 82699505 Common - ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein, C-term... BAB1_0637 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82700295 Common - GatB/Yqey BAB1_1501 152 COG1610 COG1610, Uncharacterized conserved protein Function unknown 82699190 Common - Site-specific recombinase:Resolvase, N-terminal BAB1_0292 129 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 82699968 Common - pyruvate dehydrogenase subunit beta BAB1_1151 211 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 82700564 Common pyc pyruvate carboxylase BAB1_1791 239 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 82699589 Common - short chain dehydrogenase BAB1_0721 231 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82700598 Common - hypothetical protein BAB1_1828 53 COG3762 COG3762, Predicted membrane protein Function unknown 82700620 Common nadD nicotinic acid mononucleotide adenyltransferase BAB1_1850 172 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 82700627 Common rpmA 50S ribosomal protein L27 BAB1_1857 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 82699770 Common - GCN5-related N-acetyltransferase BAB1_0919 34 COG0456 RimI, Acetyltransferases General function prediction only 82700409 Common - PAS domain:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_1621 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82699338 Common - Protein of unknown function DUF374 BAB1_0452 43 COG2121 COG2121, Uncharacterized protein conserved in bacteria Function unknown 82699592 Common - Ribonuclease T2 BAB1_0724 39 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 82700487 Common - Biopolymer transport protein ExbD/TolR BAB1_1711 138 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 82699569 Common - putative alpha-isopropylmalate/homocitrate synthase family transferase BAB1_0701 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 82699601 Common - ATP/GTP-binding protein BAB1_0733 142 COG0628 PerM, Predicted permease General function prediction only 82699881 Common folK 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokina se, HPPK BAB1_1051 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 82699340 Common aroC chorismate synthase BAB1_0454 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 82699562 Common - Lysine exporter protein (LYSE/YGGA) BAB1_0694 76 COG1279 COG1279, Lysine efflux permease General function prediction only 82699654 Common - Ubiquinol-cytochrome C chaperone BAB1_0795 22 COG5452 COG5452, Uncharacterized conserved protein Function unknown 82700723 Common - Asparaginase/glutaminase BAB1_1963 116 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 82700544 Common thiP thiamin transporter membrane protein BAB1_1771 80 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 82699750 Common - Protein of unknown function DUF173 BAB1_0899 119 COG1354 COG1354, Uncharacterized conserved protein Function unknown 82699629 Common - salicylate hydroxylase BAB1_0770 64 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 82700555 Pathogen - hypothetical protein BAB1_1782 1 None None None 82699349 Common tlyA Cell division protein FtsJ:RNA-binding S4:Hemolysin A BAB1_0463 134 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 82699748 Common - Antifreeze protein, type I BAB1_0897 16 COG5373 COG5373, Predicted membrane protein Function unknown 82700186 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1388 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 82699318 Pathogen - hypothetical protein BAB1_0432 1 None None None 82700239 Common - TPR repeat-containing protein BAB1_1441 131 COG4105 ComL, DNA uptake lipoprotein General function prediction only 82699153 Pathogen - hypothetical protein BAB1_0249 1 None None None 82700513 Common - Protein of unknown function DUF710 BAB1_1737 32 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 82699806 Common - ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop) BAB1_0955 241 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 82699333 Common fabI-1 enoyl-(acyl carrier protein) reductase BAB1_0447 222 COG0623 FabI, Enoyl- acyl-carrier-protein 82700073 Pathogen - hypothetical protein BAB1_1261 2 None None None 82700669 Common sdhA succinate dehydrogenase flavoprotein subunit BAB1_1901 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 82700276 Common - Phthalate dioxygenase reductase:Ferredoxin:Phenol hydroxylase reductase:Oxidoreductase FAD/NAD(P)-binding:Flavoprotein pyridi... BAB1_1482 139 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 82699275 Common - nitrogen fixation protein FixH BAB1_0387 22 COG5456 COG5456, Predicted integral membrane protein linked to a cation pump Inorganic ion transport and metabolism 82700061 Common rpsC 30S ribosomal protein S3 BAB1_1249 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 82699089 Common - putative deoxyribonucleotide triphosphate pyrophosphatase BAB1_0175 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 82699188 Common - Phage integrase:Phage integrase, N-terminal SAM-like BAB1_0288 21 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 82699124 Common thiG thiazole synthase BAB1_0216 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 82699767 Common - hypothetical protein BAB1_0916 17 COG4929 COG4929, Uncharacterized membrane-anchored protein Function unknown 82699561 Common - Protein of unknown function DUF159 BAB1_0693 108 COG2135 COG2135, Uncharacterized conserved protein Function unknown 82699381 Common - Surf1 protein BAB1_0500 66 COG3346 COG3346, Uncharacterized conserved protein Function unknown 82699206 Common - Bacterial regulatory protein TetR, HTH motif BAB1_0311 97 COG1309 AcrR, Transcriptional regulator Transcription 82700573 Common - NAD binding site:TrkA potassium uptake protein BAB1_1801 130 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 82699721 Common - Glyoxalase/Bleomycin resistance protein/dioxygenase domain BAB1_0867 41 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 82699950 Common clpX ATP-dependent protease ATP-binding subunit BAB1_1131 231 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 82700069 Common tuf-2 elongation factor Tu BAB1_1257 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 82700579 Common atpD F0F1 ATP synthase subunit beta BAB1_1807 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 82700402 Common ctrA Response regulator receiver:Transcriptional regulatory protein, C terminal BAB1_1614 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82699178 Common - hypothetical protein BAB1_0278 10 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 82699526 Common - Phage integrase:Phage integrase, N-terminal SAM-like BAB1_0658 200 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 82700707 Common - PpiC-type peptidyl-prolyl cis-trans isomerase BAB1_1944 122 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 82699185 Common hisD histidinol dehydrogenase BAB1_0285 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 82700201 Pathogen - hypothetical protein BAB1_1403 1 None None None 82699471 Common - hypothetical protein BAB1_0599 100 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 82699596 Common - Immunoglobulin/major histocompatibility complex:Prokaryotic molybdopterin oxidoreductase:Molybdopterin oxidoreductase:Molydop... BAB1_0728 180 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 82700280 Pathogen - hypothetical protein BAB1_1486 2 None None None 82700492 Common ruvC Holliday junction resolvase BAB1_1716 197 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 82700400 Common - hypothetical protein BAB1_1612 22 COG5400 COG5400, Uncharacterized protein conserved in bacteria Function unknown 82700415 Common - Isocitrate lyase and phosphorylmutase:Isocitrate lyase BAB1_1631 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 82700449 Common - RNA polymerase sigma factor BAB1_1672 166 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 82699608 Common - hypothetical protein BAB1_0740 3 None None None 82700682 Common xerC site-specific tyrosine recombinase XerC BAB1_1916 223 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 82699122 Common - ABC transporter substrate-binding protein KO: K02051 sulfonate/nitrate transport system substrate-binding protein BAB1_0214 108 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 82700929 Pathogen - pilus biosythesis protein-related protein BAB1_2183 2 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 82700854 Common - Nucleotidyl transferase BAB1_2103 178 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 82699821 Common - Fumarate lyase:Fe-S type hydro-lyase tartrate/fumarate alpha region:Fe-S type hydro-lyase tartrate/fumarate beta region BAB1_0977 147 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 82700593 Common htpX heat shock protein HtpX BAB1_1821 190 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 82698950 Common - Carboxyl transferase family BAB1_0019 143 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 82700817 Common trmE tRNA modification GTPase TrmE BAB1_2063 217 COG0486 ThdF, Predicted GTPase General function prediction only 82699870 Common - Sulfate transporter/antisigma-factor antagonist STAS:Protein of unknown function DUF140 BAB1_1038 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 82700618 Common - hypothetical protein BAB1_1848 165 COG1576 COG1576, Uncharacterized conserved protein Function unknown 82700759 Pathogen - hypothetical protein BAB1_2000 1 None None None 82699685 Common nuoG NADH dehydrogenase subunit G BAB1_0828 190 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 82700642 Common prfA peptide chain release factor 1 BAB1_1872 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 82700768 Pathogen - Glyceraldehyde 3-phosphate dehydrogenase BAB1_2010 1 None None None 82700479 Common - Peptidase M41:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region:AAA-protein subdomain:ATP-dependent... BAB1_1703 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 82700651 Common - Blood group Rhesus C/E and D polypeptide:Sugar transporter superfamily:Major facilitator superfamily (MFS) BAB1_1882 127 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 82699266 Common - Polysaccharide deacetylase BAB1_0375 65 COG3195 COG3195, Uncharacterized protein conserved in bacteria Function unknown 82700287 Common - Phage integrase BAB1_1493 20 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 82699047 Common - GCN5-related N-acetyltransferase BAB1_0127 92 COG2153 ElaA, Predicted acyltransferase General function prediction only 82700362 Common - hypothetical protein BAB1_1572 44 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 82699260 Common - invasion protein B BAB1_0368 19 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 82700086 Common - CBS domain BAB1_1274 165 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 82700794 Common - Antifreeze protein, type I:Peptidase M20/M25/M40 BAB1_2038 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 82700384 Common - Binding-protein-dependent transport systems inner membrane component BAB1_1594 213 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 82699045 Pathogen - hypothetical protein BAB1_0123 1 None None None 82700898 Common - GCN5-related N-acetyltransferase:Ribosomal-protein-alanine acetyltransferase BAB1_2152 180 COG0456 RimI, Acetyltransferases General function prediction only 82699491 Common - phage minor tail protein H BAB1_0619 14 COG5281 COG5281, Phage-related minor tail protein Function unknown 82699143 Common - Binding-protein-dependent transport systems inner membrane component BAB1_0239 143 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 82699891 Common - Mechanosensitive (MS) ion channel BAB1_1062 69 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 82699765 Common - hypothetical protein BAB1_0914 7 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 82700003 Common - Endoribonuclease L-PSP BAB1_1187 92 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 82699104 Common - Bacterial regulatory protein, LuxR family:Autoinducer binding domain BAB1_0190 45 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 82700837 Common - hypothetical protein BAB1_2083 10 None None None 82700610 Common mmsA ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase BAB1_1840 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 82699579 Common - DNA polymerase III subunit chi BAB1_0711 38 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 82700870 Common rpmI 50S ribosomal protein L35 BAB1_2123 37 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 82699232 Common - hypothetical protein BAB1_0338 10 None None None 82700422 Common - Patatin BAB1_1640 16 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 82700812 Common holA DNA polymerase III subunit delta BAB1_2058 69 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 82699610 Common - ATP/GTP-binding site motif A (P-loop) BAB1_0742 14 COG2019 AdkA, Archaeal adenylate kinase Nucleotide transport and metabolism 82700712 Pathogen - hypothetical protein BAB1_1951 1 None None None 82700019 Pathogen - hypothetical protein BAB1_1207 1 None None None 82699325 Common - enoyl-CoA hydratase BAB1_0439 177 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 82699257 Common - ATP/GTP-binding site motif A (P-loop):Saccharopine dehydrogenase BAB1_0364 54 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 82700719 Common aspA aspartate ammonia-lyase BAB1_1959 216 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 82699377 Common - hypothetical protein BAB1_0491 13 COG5342 COG5342, Invasion protein B, involved in pathogenesis General function prediction only 82699197 Common ureC urease subunit alpha BAB1_0300 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 82700213 Common hflC Band 7 protein BAB1_1415 120 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 82699853 Common - Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily ... BAB1_1021 168 COG0546 Gph, Predicted phosphatases General function prediction only 82699893 Pathogen - Site-specific recombinase BAB1_1064 1 None None None 82699088 Common rph ribonuclease PH BAB1_0172 181 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 82699852 Common - Protein of unknown function DUF6 BAB1_1020 162 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 82700675 Common - hypothetical protein BAB1_1909 6 None None None 82700662 Common - Bacterial regulatory protein, GntR family:Aminotransferase, class I and II BAB1_1894 221 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 82699001 Common - hypothetical protein BAB1_0075 30 None None None 82699914 Common - hypothetical protein BAB1_1092 13 None None None 82700655 Common hemC porphobilinogen deaminase BAB1_1887 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 82699656 Common plsX fatty acid/phospholipid synthesis protein BAB1_0797 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 82700789 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha BAB1_2033 179 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 82699575 Common - Organic solvent tolerance protein BAB1_0707 116 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 82699991 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase BAB1_1174 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 82698996 Common - hypothetical protein BAB1_0070 4 None None None 82700146 Pathogen - hypothetical protein BAB1_1343 2 None None None 82700376 Common - Glutamine amidotransferase class-I:Carbamoyl-phosphate synthase, GATase domain:Anthranilate synthase component I and chorisma... BAB1_1586 238 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 82700017 Common - hypothetical protein BAB1_1204 7 None None None 82699619 Common - hypothetical protein BAB1_0756 10 COG4916 COG4916, Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain Function unknown 82699697 Pathogen - hypothetical protein BAB1_0840 1 None None None 82699644 Common - Putative peptidoglycan binding domain 1:Twin-arginine translocation pathway signal BAB1_0785 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 82699546 Common - hypothetical protein BAB1_0678 41 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 82699687 Common nuoI NADH dehydrogenase subunit I BAB1_0830 195 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 82699981 Common trpC indole-3-glycerol-phosphate synthase BAB1_1164 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 82699939 Pathogen - hypothetical protein BAB1_1120 1 None None None 82699699 Common - prolyl-tRNA synthetase BAB1_0842 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82699861 Common - hypothetical protein BAB1_1029 12 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 82700413 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Spermidine/putrescine ABC transporter ATP-binding subunit BAB1_1627 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 82700701 Common - Beta-lactamase-like BAB1_1936 209 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 82700195 Common - Aminotransferase, class I and II BAB1_1397 226 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 82700125 Common cobK cobalt-precorrin-6x reductase BAB1_1319 60 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 82699393 Common - EAL domain BAB1_0512 164 COG4943 COG4943, Predicted signal transduction protein containing sensor and EAL domains Signal transduction mechanisms 82699011 Pathogen - hypothetical protein BAB1_0089 1 None None None 82700133 Common - Dynamin:ATP/GTP-binding site motif A (P-loop):Cobalamin synthesis protein/P47K BAB1_1327 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 82699841 Common - Rare lipoprotein A BAB1_1009 135 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 82699207 Common - dihydropyrimidine dehydrogenase BAB1_0313 129 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 82699984 Common lexA LexA repressor BAB1_1167 167 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 82700444 Common - hypothetical protein BAB1_1667 7 None None None 82700720 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1960 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 82700727 Common - Universal stress protein (Usp):Usp domain BAB1_1967 111 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 82700849 Common ptsH Phosphocarrier HPr protein:Histidine phosphorylation site in HPr protein BAB1_2097 139 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 82699440 Common - Mannose-6-phosphate isomerase, type II:Nucleotidyl transferase:Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate is... BAB1_0561 166 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 82700026 Common - hypothetical protein BAB1_1214 125 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 82700337 Common - Protein of unknown function DUF185 BAB1_1545 94 COG1565 COG1565, Uncharacterized conserved protein Function unknown 82700120 Common cobD Cobalamin biosynthesis protein CbiB BAB1_1314 146 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 82699906 Common - Acetyl-CoA hydrolase/transferase BAB1_1077 96 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 82700430 Common - Glucose-methanol-choline oxidoreductase:GMC oxidoreductase BAB1_1653 96 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 82699972 Common eno Enolase BAB1_1155 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 82700332 Pathogen - hypothetical protein BAB1_1540 1 None None None 82699559 Common - hypothetical protein BAB1_0691 14 COG5451 COG5451, Predicted secreted protein Function unknown 82699809 Pathogen - Heavy metal transport/detoxification protein:Heavy metal binding BAB1_0960 3 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 82700323 Common - SLT domain BAB1_1531 62 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 82699350 Common - SAM (and some other nucleotide) binding motif BAB1_0464 197 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 82699037 Common - outer membrane protein, putative BAB1_0115 30 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 82699147 Common - hypothetical protein BAB1_0243 34 COG3254 COG3254, Uncharacterized conserved protein Function unknown 82699066 Common - SAM dependent methyltransferase, putative BAB1_0150 106 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 82700581 Common atpA F0F1 ATP synthase subunit alpha BAB1_1809 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 82699902 Common - cysteine synthase A BAB1_1073 226 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 82699433 Common - Glycosyl transferase, group 1 BAB1_0553 200 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 82698944 Pathogen - hypothetical protein BAB1_0012 2 None None None 82699706 Common - hypothetical protein BAB1_0852 139 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 82699399 Common - HhH-GPD:Iron-sulfur cluster loop:Endonuclease III, FCL:A/G-specific adenine glycosylase MutY BAB1_0518 229 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 82699647 Common - hypothetical protein BAB1_0788 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 82699917 Common - hypothetical protein BAB1_1095 179 COG0759 COG0759, Uncharacterized conserved protein Function unknown 82700692 Common mdh malate dehydrogenase BAB1_1927 200 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 82699463 Common - Manganese and iron superoxide dismutase:ATP/GTP-binding site motif A (P-loop) BAB1_0591 207 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 82699838 Pathogen - hypothetical protein BAB1_1006 1 None None None 82699383 Common thrB homoserine kinase BAB1_0502 66 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 82699670 Common rplM 50S ribosomal protein L13 BAB1_0811 228 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 82700734 Common - Proline-rich extensin:Radical SAM BAB1_1975 121 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 82700624 Common - hypothetical protein BAB1_1854 10 None None None 82699509 Common pepN Membrane alanine aminopeptidase:Neutral zinc metallopeptidase, zinc-binding region BAB1_0641 161 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 82699114 Common glpD glycerol-3-phosphate dehydrogenase BAB1_0200 150 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 82700367 Common - GCN5-related N-acetyltransferase BAB1_1577 94 COG3153 COG3153, Predicted acetyltransferase General function prediction only 82699250 Common - LrgB-like protein BAB1_0356 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 82699156 Common - hypothetical protein BAB1_0252 5 COG3311 AlpA, Predicted transcriptional regulator Transcription 82700570 Common - Bacterial inner-membrane translocator BAB1_1798 141 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 82700591 Common - acetyl-CoA synthetase BAB1_1819 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 82699337 Pathogen - hypothetical protein BAB1_0451 1 None None None 82699814 Pathogen - hypothetical protein BAB1_0965 1 None None None 82699876 Pathogen - hypothetical protein BAB1_1044 1 None None None 82700262 Pathogen - Antifreeze protein, type I BAB1_1464 2 None None None 82700258 Common - manganese transport protein MntH BAB1_1460 105 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 82700694 Common - ATP/GTP-binding site motif A (P-loop):AFG1-like ATPase BAB1_1929 102 COG1485 COG1485, Predicted ATPase General function prediction only 82700223 Common - hypothetical protein BAB1_1425 20 None None None 82699518 Common - hypothetical protein BAB1_0650 11 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 82699041 Pathogen - hypothetical protein BAB1_0119 1 None None None 82699735 Common - tRNA-dihydrouridine synthase A BAB1_0882 210 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 82700804 Common - Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator BAB1_2050 128 COG1609 PurR, Transcriptional regulators Transcription 82700194 Common - hypothetical protein BAB1_1396 6 None None None 82699094 Common - hypothetical protein BAB1_0180 10 None None None 82699032 Common - Phenazine biosynthesis PhzC/PhzF protein BAB1_0110 102 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 82699223 Common - Pollen allergen Poa pIX/Phl pVI, C-terminal BAB1_0329 33 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 82700435 Common - HNH endonuclease:HNH nuclease BAB1_1658 98 COG1403 McrA, Restriction endonuclease Defense mechanisms 82699522 Pathogen - hypothetical protein BAB1_0654 1 None None None 82700705 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein BAB1_1942 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 82700096 Common - Cold-shock DNA-binding domain BAB1_1284 153 COG1278 CspC, Cold shock proteins Transcription 82699616 Common - hypothetical protein BAB1_0750 8 None None None 82700352 Common - Uridine kinase:ABC transporter, transmembrane region:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1560 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 82699487 Common - Phage head-tail adaptor, putative BAB1_0615 9 COG5614 COG5614, Bacteriophage head-tail adaptor General function prediction only 82700530 Common - Protein of unknown function DUF465 BAB1_1756 13 COG5481 COG5481, Uncharacterized conserved small protein containing a coiled-coil domain Function unknown 82700588 Common - hypothetical protein BAB1_1816 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 82699271 Common - guanine deaminase BAB1_0383 166 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 82699483 Pathogen - hypothetical protein BAB1_0611 3 None None None 82700084 Pathogen - hypothetical protein BAB1_1272 1 None None None 82700154 Common - Prokaryotic sulfate-/thiosulfate-binding protein:Bacterial extracellular solute-binding protein, family 1 BAB1_1351 88 COG4150 CysP, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 82699289 Common - Polysaccharide deacetylase BAB1_0403 11 None None None 82699363 Common rplI 50S ribosomal protein L9 BAB1_0477 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 82699302 Common - Protein of unknown function DUF85:Elongator protein 3/MiaB/NifB:Radical SAM BAB1_0416 106 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 82700104 Pathogen - hypothetical protein BAB1_1295 2 None None None 82699358 Common purF amidophosphoribosyltransferase BAB1_0472 239 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 82699161 Pathogen - hypothetical protein BAB1_0259 1 None None None 82699063 Common - hypothetical protein BAB1_0147 74 COG3176 COG3176, Putative hemolysin General function prediction only 82700745 Common hpt Phosphoribosyltransferase:Hypoxanthine phosphoribosyl transferase BAB1_1986 137 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 82700052 Common rplF 50S ribosomal protein L6 BAB1_1240 239 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 82700454 Pathogen - hypothetical protein BAB1_1677 1 None None None 82699979 Common - peptidyl-prolyl cis-trans isomerase D BAB1_1162 130 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 82700869 Common - nickel-cobalt-cadmium resistance protein BAB1_2122 40 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 82699411 Common - ureidoglycolate hydrolase BAB1_0531 35 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 82699859 Common cbbZ phosphoglycolate phosphatase BAB1_1027 175 COG0546 Gph, Predicted phosphatases General function prediction only 82699281 Common - Ferric-uptake regulator BAB1_0393 138 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 82699020 Pathogen - hypothetical protein BAB1_0098 2 None None None 82700912 Common rbfA ribosome-binding factor A BAB1_2166 78 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 82699249 Common - LrgA family BAB1_0355 62 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 82699494 Common - hypothetical protein BAB1_0626 3 None None None 82698933 Common dnaA chromosomal replication initiation protein BAB1_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 82699785 Pathogen - IS711, transposase orfA BAB1_0934 1 None None None 82699176 Pathogen - hypothetical protein BAB1_0276 1 None None None 82700030 Common - tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH family, group 1 BAB1_1218 155 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 82699195 Common ureA urease subunit gamma BAB1_0298 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 82700891 Common phoU PhoU BAB1_2145 196 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 82700922 Common - Glutelin:Lipoprotein YaeC family:NLPA lipoprotein BAB1_2176 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 82699896 Pathogen - hypothetical protein BAB1_1067 1 None None None 82700601 Pathogen - hypothetical protein BAB1_1831 1 None None None 82700308 Pathogen - hypothetical protein BAB1_1516 1 None None None 82699246 Common - hypothetical protein BAB1_0352 7 None None None 82700278 Common - Isochorismatase hydrolase family BAB1_1484 120 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 82700809 Pathogen - hypothetical protein BAB1_2055 1 None None None 82700825 Common coaE dephospho-CoA kinase BAB1_2071 205 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 82699528 Common omp2b ATP/GTP-binding site motif A (P-loop):Porin, alpha proteobacteria type BAB1_0660 13 None None None 82699277 Common - Cytochrome c heme-binding site:Cytochrome c, class I:Cytochrome c oxidase cbb3-type, subunit III:Cytochrome c, class IC BAB1_0389 82 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 82700039 Common - transcriptional regulatory protein BAB1_1227 38 COG4764 COG4764, Uncharacterized protein conserved in bacteria Function unknown 82699423 Common rfbD ABC transporter, family 2:Acriflavin resistance protein BAB1_0543 120 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 82700456 Common exbB MotA/TolQ/ExbB proton channel BAB1_1679 149 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 82700528 Common - Protein of unknown function DUF465 BAB1_1754 19 COG5570 COG5570, Uncharacterized small protein Function unknown 82699790 Pathogen - hypothetical protein BAB1_0939 2 None None None 82700819 Common rho transcription termination factor Rho BAB1_2065 212 COG1158 Rho, Transcription termination factor Transcription 82699449 Common - Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator BAB1_0572 96 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 82699719 Common - hypothetical protein BAB1_0865 55 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 82698968 Common - Cytochrome c oxidase, subunit III BAB1_0041 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 82699993 Common - Bacterial surface antigen (D15) BAB1_1176 160 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 82699820 Common - hypothetical protein BAB1_0974 50 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 82699587 Common pgsA CDP-alcohol phosphatidyltransferase:NADH-ubiquinone oxidoreductase, chain 4:CDP-diacylglycerol--glycerol-3-phosphate 3-phosph... BAB1_0719 201 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 82699466 Common - transcriptional regulatory protein MucR BAB1_0594 33 COG4957 COG4957, Predicted transcriptional regulator Transcription 82699757 Common pcm protein-L-isoaspartate O-methyltransferase BAB1_0906 154 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 82700282 Common - Choloylglycine hydrolase BAB1_1488 55 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 82700067 Common rplC 50S ribosomal protein L3 BAB1_1255 218 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 82700626 Common - GCN5-related N-acetyltransferase BAB1_1856 119 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 82700143 Common - Helix-turn-helix, AraC type:Family of unknown function ThiJ/PfpI BAB1_1338 146 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 82700566 Pathogen - hypothetical protein BAB1_1793 1 None None None 82699710 Common - ATP/GTP-binding site motif A (P-loop):BolA-like protein BAB1_0856 81 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 82700761 Pathogen - hypothetical protein BAB1_2002 1 None None None 82700515 Pathogen - hypothetical protein BAB1_1739 1 None None None 82699590 Common - OmpA-like transmembrane domain BAB1_0722 16 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 82699292 Common - Heat shock protein Hsp70 BAB1_0406 225 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 82699550 Pathogen - hypothetical protein BAB1_0682 1 None None None 82700398 Common - hypothetical protein BAB1_1610 49 COG2388 COG2388, Predicted acetyltransferase General function prediction only 82699808 Pathogen - hypothetical protein BAB1_0959 1 None None None 82700365 Common - RNA-binding region RNP-1 (RNA recognition motif):Blue (type 1) copper domain BAB1_1575 31 None None None 82699342 Common - Histone deacetylase family BAB1_0456 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 82700375 Pathogen - hypothetical protein BAB1_1585 1 None None None 82700814 Common - NifH/frxC family:ATPase, ParA type BAB1_2060 199 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 82699397 Common babI SAM (and some other nucleotide) binding motif:Site-specific DNA-methyltransferase (cytosine-N4-specific):N-6 Adenine-specific... BAB1_0516 144 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 82700876 Common - Heat shock protein Hsp70:Calcium-binding EF-hand BAB1_2129 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 82700044 Common rpsK 30S ribosomal protein S11 BAB1_1232 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 82700596 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase BAB1_1824 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 82700188 Common crcB Camphor resistance CrcB protein BAB1_1390 167 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 82700006 Common - Histidine triad (HIT) protein BAB1_1190 236 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 82700577 Pathogen - hypothetical protein BAB1_1805 1 None None None 82699058 Common - hypothetical protein BAB1_0140 26 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 82700777 Pathogen - hypothetical protein BAB1_2021 1 None None None 82700508 Common - 2Fe-2S ferredoxins, iron-sulfur binding protein BAB1_1732 14 COG3543 COG3543, Uncharacterized conserved protein Function unknown 82700294 Common - Na+/Pi-cotransporter BAB1_1500 71 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 82699746 Common dgt deoxyguanosinetriphosphate triphosphohydrolase-like protein BAB1_0895 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 82699728 Common - acyl carrier protein BAB1_0874 97 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82700232 Common - Bacterial transferase hexapeptide repeat BAB1_1434 73 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 82700109 Common map methionine aminopeptidase BAB1_1300 243 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 82700673 Common leuC isopropylmalate isomerase large subunit BAB1_1905 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 82700725 Pathogen - hypothetical protein BAB1_1965 1 None None None 82699524 Common - Protein of unknown function DUF423 BAB1_0656 15 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 82699003 Common phhB pterin-4-alpha-carbinolamine dehydratase BAB1_0077 105 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 82699594 Common - N-6 Adenine-specific DNA methylase:Protein of unknown function DUF519 BAB1_0726 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 82700802 Common - Enoyl-CoA hydratase/isomerase BAB1_2046 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 82700289 Pathogen - Antifreeze protein, type I BAB1_1495 2 None None None 82699021 Common - Response regulator receiver BAB1_0099 27 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 82700501 Common - hypothetical protein BAB1_1725 28 None None None 82699116 Common - Zinc-containing alcohol dehydrogenase superfamily:Zinc-containing alcohol dehydrogenase BAB1_0204 207 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 82700173 Common - Protein of unknown function DUF187 BAB1_1374 38 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 82699557 Common - hypothetical protein BAB1_0689 6 None None None 82699438 Common - transposase BAB1_0559 36 None None None 82699878 Common - hypothetical protein BAB1_1048 9 COG5661 COG5661, Predicted secreted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 82699213 Common - Esterase/lipase/thioesterase, active site:ATP/GTP-binding site motif A (P-loop) BAB1_0319 27 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 162002879 Common trpS tryptophanyl-tRNA synthetase BAB1_0141 232 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700883 Common - Band 4.1 domain BAB1_2137 26 COG3672 COG3672, Predicted periplasmic protein Function unknown 82698986 Common - Fumarylacetoacetate (FAA) hydrolase BAB1_0060 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 82700470 Pathogen - hypothetical protein BAB1_1694 1 None None None 82699581 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0713 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 82700901 Common - ATP/GTP-binding site motif A (P-loop):PhoH-like protein BAB1_2155 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 82699406 Common - Polysaccharide deacetylase BAB1_0526 24 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 82699229 Common metZ O-succinylhomoserine sulfhydrylase BAB1_0335 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 82699769 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B BAB1_0918 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 82700548 Common rpoH2 RNA polymerase factor sigma-32 BAB1_1775 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 82699222 Common - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_0328 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 82700005 Common - Protein of unknown function DUF482 BAB1_1189 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 82699204 Common - Acriflavin resistance protein BAB1_0307 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 82699234 Common - Sodium:dicarboxylate symporter:Multi antimicrobial extrusion protein MatE BAB1_0340 91 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 82700521 Common - Glucose/ribitol dehydrogenase BAB1_1745 5 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82700303 Common - NUDIX hydrolase BAB1_1511 4 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 82700799 Common - 3-ketoacyl-(acyl-carrier-protein) reductase BAB1_2043 232 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82698979 Common - Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I BAB1_0053 113 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 82700663 Common - ATP/GTP-binding site motif A (P-loop):Cell divisionFtsK/SpoIIIE protein:AAA ATPase BAB1_1895 197 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 82699255 Pathogen - hypothetical protein BAB1_0362 1 None None None 82700208 Common - Phosphoserine phosphatase SerB:Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IB (PSPase-like) BAB1_1410 154 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 82699895 Common - xanthine-guanine phosphoribosyltransferase BAB1_1066 70 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 82699850 Pathogen - hypothetical protein BAB1_1018 1 None None None 82700368 Common - Glutathione S-transferase, C-terminal BAB1_1578 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 82699323 Common - hypothetical protein BAB1_0437 4 COG3905 COG3905, Predicted transcriptional regulator Transcription 82700489 Common - hypothetical protein BAB1_1713 126 COG0824 FcbC, Predicted thioesterase General function prediction only 82699963 Common - hypothetical protein BAB1_1146 100 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 82699959 Common - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_1141 223 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 82699375 Common gmk guanylate kinase BAB1_0489 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 82699051 Pathogen - IS711, transposase orfA BAB1_0133 1 None None None 82699145 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0241 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 82699888 Common - Proline-rich region:Proline-rich extensin BAB1_1058 13 COG5373 COG5373, Predicted membrane protein Function unknown 82699677 Pathogen - hypothetical protein BAB1_0820 1 None None None 82700211 Common - Serine protease, V8 family:Serine protease, trypsin family:PDZ/DHR/GLGF domain:HtrA/DegQ protease:Glucose/ribitol dehydrogenase BAB1_1413 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 82700608 Common - pyridoxamine kinase BAB1_1838 58 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 82700646 Common - hypothetical protein BAB1_1877 47 COG5319 COG5319, Uncharacterized protein conserved in bacteria Function unknown 82699267 Pathogen - hypothetical protein BAB1_0376 2 COG2351 COG2351, Transthyretin-like protein General function prediction only 82699082 Common - CysZ-like protein BAB1_0166 28 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 82699606 Common lldP L-lactate permease BAB1_0738 103 COG1620 LldP, L-lactate permease Energy production and conversion 82699986 Common gltX glutamyl-tRNA synthetase BAB1_1169 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 82700680 Common trmD tRNA (guanine-N(1)-)-methyltransferase BAB1_1914 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 82700407 Pathogen - hypothetical protein BAB1_1619 1 None None None 82699668 Common - Putative agmatinase:Arginase/agmatinase/formiminoglutamase BAB1_0809 132 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 82700616 Common - Peptidase M23/M37 BAB1_1846 120 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 82700429 Common - hypothetical protein BAB1_1652 6 COG5591 COG5591, Uncharacterized conserved protein Function unknown 82700551 Common fdxA 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain BAB1_1778 157 COG1146 COG1146, Ferredoxin Energy production and conversion 82700710 Pathogen - hypothetical protein BAB1_1947 1 None None None 82699209 Common - hypothetical protein BAB1_0315 40 COG3427 COG3427, Uncharacterized conserved protein Function unknown 82699732 Common phnM Amidohydrolase BAB1_0879 53 COG3454 COG3454, Metal-dependent hydrolase involved in phosphonate metabolism Inorganic ion transport and metabolism 82700852 Common - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_2101 219 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 82699683 Common nuoE NADH dehydrogenase subunit E BAB1_0826 154 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 82699262 Common - Bacterial regulatory protein, LuxR family:Response regulator receiver BAB1_0370 215 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 82700858 Common trx-1 Thioredoxin:Thioredoxin type domain:Thioredoxin domain 2 BAB1_2107 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 82700881 Common - Senescence marker protein-30 (SMP-30) BAB1_2134 76 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 82699624 Common - PA-phosphatase related phosphoesterase BAB1_0761 80 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 82700640 Pathogen - hypothetical protein BAB1_1870 1 None None None 82700851 Pathogen - hypothetical protein BAB1_2100 1 None None None 82700772 Common rpmB 50S ribosomal protein L28 BAB1_2016 152 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 82699584 Common - Protein of unknown function DUF306 BAB1_0716 46 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 82699530 Pathogen - hypothetical protein BAB1_0662 1 None None None 82700386 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1596 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 82700266 Common metF Methylenetetrahydrofolate reductase:5,10-methylenetetrahydrofolate reductase BAB1_1468 143 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 82699168 Pathogen - hypothetical protein BAB1_0268 1 None None None 82700633 Common - transposase, putative BAB1_1863 46 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699296 Common - ATP synthase KO: K02116 ATP synthase protein I BAB1_0410 25 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 82700784 Common - CBS domain:CBS:Transporter associated domain BAB1_2028 219 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 82699064 Common lspA Signal peptidase II, family A8 BAB1_0148 202 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 82700703 Common - NUDIX hydrolase BAB1_1940 172 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 82700310 Common trxB Pyridine nucleotide-disulphide oxidoreductase, class-II:Adrenodoxin reductase:Pyridine nucleotide-disulphide oxidoreductase, ... BAB1_1518 245 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 82700358 Common hemF coproporphyrinogen III oxidase BAB1_1566 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 82699117 Common - Bacterial regulatory protein LacI, HTH motif:Periplasmic binding protein/LacI transcriptional regulator BAB1_0206 127 COG1609 PurR, Transcriptional regulators Transcription 82699475 Common - hypothetical protein BAB1_0603 25 COG5447 COG5447, Uncharacterized conserved protein Function unknown 82698936 Common - molybdopterin biosynthesis protein MoeB BAB1_0004 218 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 82699692 Common - NADH dehydrogenase subunit N BAB1_0835 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 82700351 Common - Rieske iron-sulfur protein:Rieske [2Fe-2S] domain:Twin-arginine translocation pathway signal:Ubiquinol-cytochrome c reductase... BAB1_1559 100 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 82699819 Common moaA molybdenum cofactor biosynthesis protein A BAB1_0973 200 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 82699447 Common - xylose isomerase BAB1_0570 72 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 82700464 Common - Bacterial regulatory proteins, AsnC family:Helix-turn-helix, Fis-type BAB1_1688 155 COG1522 Lrp, Transcriptional regulators Transcription 82699860 Pathogen - hypothetical protein BAB1_1028 1 None None None 82698946 Pathogen - hypothetical protein BAB1_0015 1 None None None 82699783 Common - Glycosyl transferase, family 51:Penicillin-binding protein, transpeptidase domain BAB1_0932 202 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 82699239 Common - Bacterial regulatory protein, LuxR family:Response regulator receiver BAB1_0345 176 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 82699887 Pathogen - hypothetical protein BAB1_1057 1 None None None 82700474 Pathogen - hypothetical protein BAB1_1698 1 None None None 82699690 Common - NADH dehydrogenase subunit L BAB1_0833 208 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 82699219 Common - Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 BAB1_0325 103 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 82699967 Common aceF branched-chain alpha-keto acid dehydrogenase subunit E2 BAB1_1150 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 82700550 Common - Transcription factor CarD BAB1_1777 83 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 82700203 Common - hypothetical protein BAB1_1405 8 None None None 82700345 Common - translation-associated GTPase BAB1_1553 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 82699355 Common - phosphatidylserine decarboxylase BAB1_0469 94 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 82700547 Common - MOSC domain BAB1_1774 79 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 82700860 Common accD acetyl-CoA carboxylase subunit beta BAB1_2109 218 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 82699486 Common - hypothetical protein BAB1_0614 19 None None None 82699517 Common - Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal BAB1_0649 98 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 82698967 Common - Copper center Cu(A):Cytochrome o ubiquinol oxidase subunit II BAB1_0038 135 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 82699847 Common - TatD-related deoxyribonuclease BAB1_1015 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 82699074 Pathogen - hypothetical protein BAB1_0158 1 None None None 82699251 Common - Esterase/lipase/thioesterase, active site BAB1_0358 24 COG4782 COG4782, Uncharacterized protein conserved in bacteria Function unknown 82699747 Common argS arginyl-tRNA synthetase BAB1_0896 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82699311 Common - Clp protease:Peptidase U7:Na+/H+ antiporter NhaA BAB1_0425 203 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 82699831 Common - hypothetical protein BAB1_0994 9 COG2929 COG2929, Uncharacterized protein conserved in bacteria Function unknown 82700418 Common - 7-alpha-hydroxysteroid dehydrogenase BAB1_1634 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82700740 Common - Sodium:dicarboxylate symporter:Thioredoxin type domain:Thioredoxin domain 2 BAB1_1981 137 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 82700015 Common - Bacterial regulatory protein, MerR family BAB1_1201 102 COG0789 SoxR, Predicted transcriptional regulators Transcription 82700913 Common truB tRNA pseudouridine synthase B BAB1_2167 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 82698977 Common - Protein of unknown function DUF461 BAB1_0051 89 COG4549 COG4549, Uncharacterized protein conserved in bacteria Function unknown 82699868 Common - malic enzyme BAB1_1036 214 COG0281 SfcA, Malic enzyme Energy production and conversion 82699306 Pathogen - hypothetical protein BAB1_0420 2 None None None 82700915 Common - polynucleotide phosphorylase/polyadenylase BAB1_2169 240 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 82700150 Common - hypothetical protein BAB1_1347 41 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 82699091 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase:ATP/GTP-binding site motif A (P-loop):Protein of unknown... BAB1_0177 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 82700164 Common - Oxidoreductase, N-terminal:ATP/GTP-binding site motif A (P-loop):Oxidoreductase, C-terminal BAB1_1363 174 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 82699642 Common - Bacterial regulatory protein, MarR family BAB1_0783 22 COG1846 MarR, Transcriptional regulators Transcription 82699177 Pathogen - hypothetical protein BAB1_0277 1 None None None 82700309 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_1517 188 COG0583 LysR, Transcriptional regulator Transcription 82699365 Common rpsR 30S ribosomal protein S18 BAB1_0479 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 82699304 Pathogen - hypothetical protein BAB1_0418 2 None None None 82699137 Common - Pyridine nucleotide-disulphide oxidoreductase, class-II:FAD dependent oxidoreductase:Sarcosine oxidase, beta subunit, heterot... BAB1_0230 115 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 82699705 Common rpsD 30S ribosomal protein S4 BAB1_0851 224 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 82699221 Common - Domain of unknown function DUF344 BAB1_0327 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 82699228 Common apaG ApaG BAB1_0334 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 82700833 Common - hypothetical protein BAB1_2079 6 None None None 82699812 Common - Outer membrane efflux protein BAB1_0963 150 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 82699737 Common - hypothetical protein BAB1_0884 42 COG3313 COG3313, Predicted Fe-S protein General function prediction only 82700101 Common glpX fructose 1,6-bisphosphatase II BAB1_1292 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 82700679 Common - Bacterial regulatory protein LysR, HTH motif:Bacterial regulatory protein, ArsR family BAB1_1913 40 COG0640 ArsR, Predicted transcriptional regulators Transcription 82700396 Pathogen - hypothetical protein BAB1_1608 1 None None None 82699429 Common - transposase BAB1_0549 44 None None None 82699396 Common - Cl-channel, voltage gated BAB1_0515 131 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 82700878 Common - SAM (and some other nucleotide) binding motif BAB1_2131 41 COG3963 COG3963, Phospholipid N-methyltransferase Lipid metabolism 82700690 Common - succinyl-CoA synthetase subunit alpha BAB1_1925 214 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 82700094 Common - Alpha/beta hydrolase fold:Esterase/lipase/thioesterase, active site:Prolyl aminopeptidase S33:Alpha/beta hydrolase BAB1_1282 91 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 82700440 Common - malate synthase G BAB1_1663 83 COG2225 AceB, Malate synthase Energy production and conversion 82700325 Common - Glutelin:Proline-rich region BAB1_1533 8 None None None 82700361 Common - NUDIX hydrolase BAB1_1571 116 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 82699294 Common - ATP/GTP-binding site motif A (P-loop) BAB1_0408 48 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 82699614 Common - hypothetical protein BAB1_0746 8 None None None 82699570 Common - Protein of unknown function DUF6:RarD protein BAB1_0702 96 COG2962 RarD, Predicted permeases General function prediction only 82699024 Common - Formate/nitrite transporter BAB1_0102 3 None None None 82700119 Common - Leu/Ile/Val-binding protein family BAB1_1313 48 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 82700654 Common hemD uroporphyrinogen-III synthase BAB1_1886 27 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 82699908 Common - Bile acid:sodium symporter BAB1_1086 58 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 82700791 Common - hypothetical protein BAB1_2035 103 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 82699631 Common ppk polyphosphate kinase BAB1_0772 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 82699344 Common - DedA family BAB1_0458 138 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 82700020 Pathogen - hypothetical protein BAB1_1208 2 None None None 82700867 Common - Esterase/lipase/thioesterase, active site:Alpha/beta hydrolase BAB1_2120 48 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 82698937 Common - Pyridine nucleotide-disulphide oxidoreductase, class I:D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BAB1_0005 224 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 82700494 Common - Bacterial general secretion pathway protein H BAB1_1718 32 COG4645 COG4645, Uncharacterized protein conserved in bacteria Function unknown 82699700 Common - Bacterial general secretion pathway protein H:Protein of unknown function DUF214 BAB1_0843 193 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 82699926 Pathogen - hypothetical protein BAB1_1105 1 None None None 82699987 Common gltA type II citrate synthase BAB1_1170 194 COG0372 GltA, Citrate synthase Energy production and conversion 82699740 Common - Bacterial regulatory proteins, AsnC family BAB1_0887 154 COG1522 Lrp, Transcriptional regulators Transcription 82699788 Common - Transposase, IS4 BAB1_0937 57 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699800 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0949 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 82699101 Common - hypothetical protein BAB1_0187 6 None None None 82699422 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0542 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 82700025 Common - hypothetical protein BAB1_1213 6 None None None 82700043 Common rpoA DNA-directed RNA polymerase subunit alpha BAB1_1231 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 82699793 Common - RNA-binding region RNP-1 (RNA recognition motif) BAB1_0942 30 None None None 82700436 Pathogen - hypothetical protein BAB1_1659 1 None None None 82700300 Common carB carbamoyl phosphate synthase large subunit BAB1_1508 233 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 82699781 Common - Ribonuclease E and G BAB1_0930 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 82700539 Common - hypothetical protein BAB1_1765 38 COG3750 COG3750, Uncharacterized protein conserved in bacteria Function unknown 82700256 Common mraW S-adenosyl-methyltransferase MraW BAB1_1458 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 82700827 Common secB preprotein translocase subunit SecB BAB1_2073 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 82699713 Common - Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal BAB1_0859 102 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 82699149 Pathogen - hypothetical protein BAB1_0245 1 None None None 82698956 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_0027 191 COG0583 LysR, Transcriptional regulator Transcription 82699544 Common - Major facilitator superfamily (MFS) BAB1_0676 114 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 82699622 Pathogen - hypothetical protein BAB1_0759 1 None None None 82700820 Common - Conserved hypothetical protein 701 BAB1_2066 97 COG1981 COG1981, Predicted membrane protein Function unknown 82698997 Common - argininosuccinate synthase BAB1_0071 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 82700114 Common cobH precorrin-8X methylmutase BAB1_1305 119 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 82700240 Pathogen - hypothetical protein BAB1_1442 1 None None None 82699409 Common - Beta-lactamase-like BAB1_0529 142 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 82700559 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase BAB1_1786 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 82699385 Common - Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen BAB1_0504 81 COG0678 AHP1, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 82699679 Common - NADH dehydrogenase subunit A BAB1_0822 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 82699331 Common - hypothetical protein BAB1_0445 9 None None None 82699214 Common fadD acyl-CoA synthetase BAB1_0320 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82700197 Common - ketol-acid reductoisomerase BAB1_1399 214 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 82700583 Common - hypothetical protein BAB1_1811 6 None None None 82700600 Common - LemA family BAB1_1830 131 COG1704 LemA, Uncharacterized conserved protein Function unknown 82699126 Common - Mercuric reductase:Flavin-containing monooxygenase FMO:Pyridine nucleotide-disulphide oxidoreductase, class I:TrkA potassium ... BAB1_0218 90 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 82700135 Common - hypothetical protein BAB1_1330 10 None None None 82700584 Common priA primosome assembly protein PriA BAB1_1812 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 82700607 Common - Carbonic anhydrase, prokaryotic BAB1_1837 152 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 82699243 Common - 5-aminolevulinate synthase BAB1_0349 191 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 82699155 Pathogen - hypothetical protein BAB1_0251 1 None None None 82700128 Common - hypothetical protein BAB1_1322 5 COG4103 COG4103, Uncharacterized protein conserved in bacteria Function unknown 82700535 Common pyk pyruvate kinase BAB1_1761 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 82700058 Common rpsQ 30S ribosomal protein S17 BAB1_1246 219 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 82699658 Common ihfA integration host factor subunit alpha BAB1_0799 196 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 82700340 Common - lipoprotein, putative BAB1_1548 9 None None None 82698990 Common - SLT domain BAB1_0064 21 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 82699456 Common - Death-on-curing family protein BAB1_0581 64 COG3654 Doc, Prophage maintenance system killer protein General function prediction only 82699552 Common recO DNA repair protein RecO BAB1_0684 39 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 82699248 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_0354 176 COG0583 LysR, Transcriptional regulator Transcription 82700857 Pathogen - hypothetical protein BAB1_2106 1 None None None 82700926 Common - NLP/P60 BAB1_2180 69 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 82700427 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1650 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 82699681 Common nuoC NADH dehydrogenase subunit C BAB1_0824 175 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 82700483 Common - MotY protein:Bacterial outer membrane protein:OmpA/MotB domain BAB1_1707 154 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 82699054 Common - Response regulator receiver:Helix-turn-helix, Fis-type BAB1_0136 219 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 82700614 Common ialA dinucleoside polyphosphate hydrolase BAB1_1844 113 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 82699957 Common ntrY PAS domain:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor prot... BAB1_1139 220 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 82699025 Common - hypothetical protein BAB1_0103 10 COG1434 COG1434, Uncharacterized conserved protein Function unknown 82700850 Common ahcY S-adenosyl-L-homocysteine hydrolase BAB1_2099 178 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 82700001 Common rpsB 30S ribosomal protein S2 BAB1_1184 228 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 82699620 Common - Bacterial SH3-like region BAB1_0757 15 COG4991 COG4991, Uncharacterized protein with a bacterial SH3 domain homologue Function unknown 82699287 Common - Tetracycline resistance protein:Major facilitator superfamily (MFS) BAB1_0401 68 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 82700272 Common - putative ABC transporter ATP-binding protein BAB1_1474 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 82700715 Common - Solute-binding protein/glutamate receptor:Bacterial extracellular solute-binding protein, family 3 BAB1_1954 169 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 82700210 Pathogen - hypothetical protein BAB1_1412 1 None None None 82699977 Common secG preprotein translocase subunit SecG BAB1_1160 14 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 82699872 Common - hypothetical protein BAB1_1040 68 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 82698973 Common - ErfK/YbiS/YcfS/YnhG:Twin-arginine translocation pathway signal BAB1_0047 70 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 82700764 Common - Cyclic nucleotide-binding domain:cAMP-dependent protein kinase:Delta crystallin BAB1_2005 49 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 82699930 Common - Bacterial luciferase BAB1_1111 113 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 82700908 Common - hypothetical protein BAB1_2162 160 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 82700644 Common - aspartate kinase BAB1_1874 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 82699328 Common purD phosphoribosylamine--glycine ligase BAB1_0442 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 82699373 Common - Protein of unknown function DUF175 BAB1_0487 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 82699648 Common ribD Cytidine/deoxycytidylate deaminase, zinc-binding region:Bacterial bifunctional deaminase-reductase, C-terminal:Riboflavin bio... BAB1_0789 227 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 82699582 Common - DinB BAB1_0714 36 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 82699856 Common glnB Nitrogen regulatory protein P-II:P-II protein urydylation site BAB1_1024 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 82699857 Common - hypothetical protein BAB1_1025 221 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 82700380 Common - methyltransferase BAB1_1590 17 COG5459 COG5459, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 82699970 Common - Septum formation initiator BAB1_1153 32 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 82699730 Common galM Aldose 1-epimerase BAB1_0876 93 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 82699236 Common - hypothetical protein BAB1_0342 46 COG3502 COG3502, Uncharacterized protein conserved in bacteria Function unknown 82700758 Pathogen - hypothetical protein BAB1_1999 2 None None None 82699755 Common serS seryl-tRNA synthetase BAB1_0904 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700755 Common - hypothetical protein BAB1_1996 34 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 82699415 Common - Glycosyl transferase, family 4 BAB1_0535 33 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 82700874 Common pheT phenylalanyl-tRNA synthetase subunit beta BAB1_2127 235 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 82700319 Common - hypothetical protein BAB1_1527 36 COG3921 COG3921, Uncharacterized protein conserved in bacteria Function unknown 82700843 Common - hypothetical protein BAB1_2089 109 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 82700517 Common gap Glyceraldehyde 3-phosphate dehydrogenase:TrkA potassium uptake protein:Glyceraldehyde-3-phosphate dehydrogenase, type I BAB1_1741 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 82700008 Common clpS ATP-dependent Clp protease adaptor protein ClpS BAB1_1192 119 COG2127 COG2127, Uncharacterized conserved protein Function unknown 82699506 Common glnE Rhodopsin-like GPCR superfamily:Glutamate-ammonia ligase adenylyltransferase BAB1_0638 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 82700391 Common - hypothetical protein BAB1_1603 9 COG0748 HugZ, Putative heme iron utilization protein Inorganic ion transport and metabolism 82700248 Common murG N-acetylglucosaminyl transferase BAB1_1450 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 82700130 Common - hypothetical protein BAB1_1324 45 COG2510 COG2510, Predicted membrane protein Function unknown 82700739 Common - hypothetical protein BAB1_1980 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 82700568 Common - hypothetical protein BAB1_1795 10 None None None 82699996 Common cdsA Phosphatidate cytidylyltransferase:Homoserine kinase BAB1_1179 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 82700560 Common - Polyprenyl synthetase BAB1_1787 240 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 82699541 Common pyrE orotate phosphoribosyltransferase BAB1_0673 107 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 82699729 Common - hypothetical protein BAB1_0875 31 COG3926 zliS, Putative secretion activating protein General function prediction only 82699336 Pathogen - hypothetical protein BAB1_0450 1 None None None 82699070 Common - hypothetical protein BAB1_0154 17 COG5375 COG5375, Uncharacterized protein conserved in bacteria Function unknown 82699745 Common - Protein of unknown function, HesB/YadR/YfhF BAB1_0894 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 82700606 Common - lytic murein transglycosylase, putative BAB1_1836 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 82699031 Common pncB nicotinate phosphoribosyltransferase BAB1_0109 60 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 82699760 Common - YajC BAB1_0909 54 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 82699005 Common - Lipolytic enzyme, G-D-S-L family BAB1_0081 105 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 82700779 Common - Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):Cobalt chelatase, pCobS small subunit BAB1_2023 67 COG0714 COG0714, MoxR-like ATPases General function prediction only 82700269 Common - Sugar transporter:Citrate-proton symport:General substrate transporter:Sugar transporter superfamily:Major facilitator superf... BAB1_1471 136 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 82700405 Common - Oxidoreductase, N-terminal:Oxidoreductase, C-terminal BAB1_1617 187 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 82700076 Common rpoB DNA-directed RNA polymerase subunit beta BAB1_1264 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 82700665 Common - Acyl-CoA thioesterase BAB1_1897 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 82699983 Common moeA Molybdenum cofactor biosynthesis protein:MoeA N-terminal region, domain I and II:MoeA C-terminal, domain IV BAB1_1166 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 82700246 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase BAB1_1448 148 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 82699464 Pathogen - hypothetical protein BAB1_0592 1 None None None 82700425 Common - Periplasmic binding protein/LacI transcriptional regulator BAB1_1648 107 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 82700291 Common - hypothetical protein BAB1_1497 15 COG5453 COG5453, Uncharacterized conserved protein Function unknown 82699636 Common parC DNA topoisomerase IV subunit A BAB1_0777 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 82699314 Common - hypothetical protein BAB1_0428 22 None None None 82700721 Common - Asparaginase/glutaminase BAB1_1961 137 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 82699947 Common uvrA excinuclease ABC subunit A BAB1_1128 238 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 162002872 Common leuA 2-isopropylmalate synthase BAB1_1583 209 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 82699282 Pathogen - hypothetical protein BAB1_0394 1 None None None 82700540 Common - H+-transporting two-sector ATPase, A subunit:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1766 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 82699194 Common ureD-1 Urease accessory protein UreD BAB1_0297 75 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 82699566 Pathogen - hypothetical protein BAB1_0698 1 None None None 82700307 Pathogen - hypothetical protein BAB1_1515 1 None None None 82700728 Common - ATP/GTP-binding site motif A (P-loop):Pyridoxal-5'-phosphate-dependent enzyme, beta family:Glucose/ribitol dehydrogenase:Cyst... BAB1_1968 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 82700182 Common - ATP-dependent DNA ligase BAB1_1384 17 COG5266 CbiK, ABC-type Co2+ transport system, periplasmic component Inorganic ion transport and metabolism 82699119 Common - Aldehyde dehydrogenase BAB1_0211 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 82699157 Pathogen - hypothetical protein BAB1_0253 1 None None None 82699412 Common - Transthyretin BAB1_0532 63 COG2351 COG2351, Transthyretin-like protein General function prediction only 82699532 Pathogen - hypothetical protein BAB1_0664 1 None None None 82699605 Pathogen - hypothetical protein BAB1_0737 2 None None None 82700034 Common - bacterial alkaline phosphatase BAB1_1222 86 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 82700083 Common tuf-2 elongation factor Tu BAB1_1271 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 82699775 Common accC acetyl-CoA carboxylase biotin carboxylase subunit BAB1_0924 237 COG0439 AccC, Biotin carboxylase Lipid metabolism 82700370 Common - NUDIX hydrolase BAB1_1580 49 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 82700175 Common ureA urease subunit gamma BAB1_1376 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 82700510 Common - Metallo-phosphoesterase:Conserved hypothetical protein 282 BAB1_1734 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 82699802 Common - Aminotransferase, class V BAB1_0951 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 82699845 Pathogen - hypothetical protein BAB1_1013 1 None None None 82699408 Common - hypothetical protein BAB1_0528 31 COG5373 COG5373, Predicted membrane protein Function unknown 82700157 Common - DedA family BAB1_1354 83 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 82699898 Common - Molybdenum cofactor biosynthesis protein BAB1_1069 166 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 82700040 Common - recombination factor protein RarA BAB1_1228 239 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 82699817 Common mobB Rhodopsin-like GPCR superfamily BAB1_0971 69 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 82699313 Common - SAM (and some other nucleotide) binding motif:Site-specific DNA-methyltransferase (cytosine-N4-specific):N-6 Adenine-specific... BAB1_0427 27 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 82700808 Common - Protein of unknown function DUF534 BAB1_2054 55 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 82700886 Common - hypothetical protein BAB1_2140 80 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 82699565 Common cysS cysteinyl-tRNA synthetase BAB1_0697 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700205 Common ilvH acetolactate synthase 3 regulatory subunit BAB1_1407 188 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 82699128 Common - PAS domain:GGDEF:PAS-associated C-terminal domain:PAC motif:EAL domain BAB1_0220 192 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 82700893 Common - lipoprotein, putative BAB1_2147 23 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 82699444 Common rbsC-1 Tetracycline resistance protein TetB:Bacterial inner-membrane translocator BAB1_0566 136 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 82700924 Common - TrkA potassium uptake protein:D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain:D-isomer specific 2-hydroxyacid... BAB1_2178 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 82699175 Pathogen - hypothetical protein BAB1_0275 1 None None None 82700523 Common - Bacterial regulatory protein, DeoR family BAB1_1747 101 COG2378 COG2378, Predicted transcriptional regulator Transcription 82699181 Common maf-1 Maf-like protein BAB1_0281 194 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 82699488 Common - hypothetical protein BAB1_0616 14 None None None 82699184 Common - hypothetical protein BAB1_0284 31 COG5328 COG5328, Uncharacterized protein conserved in bacteria Function unknown 82699725 Common - Zinc-containing alcohol dehydrogenase superfamily:Glucose/ribitol dehydrogenase BAB1_0871 211 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 82700687 Common - hypothetical protein BAB1_1921 18 COG3686 COG3686, Predicted membrane protein Function unknown 82699202 Pathogen - hypothetical protein BAB1_0305 1 None None None 82700065 Common rplW 50S ribosomal protein L23 BAB1_1253 229 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 82699451 Common - betaine aldehyde dehydrogenase BAB1_0576 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 82700689 Common kgd alpha-ketoglutarate decarboxylase BAB1_1923 148 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 82700472 Common - GCN5-related N-acetyltransferase BAB1_1696 22 COG0456 RimI, Acetyltransferases General function prediction only 82699965 Pathogen - hypothetical protein BAB1_1148 2 None None None 82699253 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase BAB1_0360 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 82700377 Common lrp-2 Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein LysR, HTH motif BAB1_1587 159 COG1522 Lrp, Transcriptional regulators Transcription 82700261 Common - Heat shock protein DnaJ, N-terminal BAB1_1463 70 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 82699272 Common - MOFRL BAB1_0384 86 COG2379 GckA, Putative glycerate kinase Carbohydrate transport and metabolism 82700284 Pathogen - hypothetical protein BAB1_1490 1 None None None 82700670 Common - hypothetical protein BAB1_1902 44 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 82700423 Common - hypothetical protein BAB1_1641 3 None None None 82699942 Common - Guanylate kinase/L-type calcium channel region BAB1_1123 76 COG3709 COG3709, Uncharacterized component of phosphonate metabolism Inorganic ion transport and metabolism 82699380 Common coxC Cytochrome c oxidase, subunit III BAB1_0497 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 82700023 Common - Biotin/lipoyl attachment:Biotin-requiring enzyme, attachment site:Carbamoyl-phosphate synthase L chain, ATP-binding:Carbamoyl... BAB1_1211 239 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 82699932 Common - hypothetical protein BAB1_1113 165 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 82700169 Common - ABC transporter, family 2 BAB1_1368 119 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 82700467 Common - hypothetical protein BAB1_1691 26 COG1633 COG1633, Uncharacterized conserved protein Function unknown 82700749 Pathogen - hypothetical protein BAB1_1990 1 None None None 82699810 Pathogen - hypothetical protein BAB1_0961 1 None None None 82700202 Common - pyridoxal phosphate biosynthetic protein PdxJ BAB1_1404 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 82698972 Common - Family of unknown function DUF490 BAB1_0046 49 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 82700416 Common - hypothetical protein BAB1_1632 6 None None None 82699285 Common - Conserved hypothetical protein, ArsC related:Arsenate reductase and related BAB1_0399 110 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 82699538 Pathogen - hypothetical protein BAB1_0670 1 None None None 82700459 Common - Protein of unknown function DUF214 BAB1_1683 169 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 82698954 Common rpsA 30S ribosomal protein S1 BAB1_0025 217 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 82699758 Common - Peptidoglycan-binding LysM:Peptidase M23/M37 BAB1_0907 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 82700839 Common - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase BAB1_2085 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 82699018 Common ilvD dihydroxy-acid dehydratase BAB1_0096 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 82699212 Common - Eukaryotic thiol (cysteine) protease:ATPase, E1-E2 type:Blood group Rhesus C/E and D polypeptide:Haloacid dehalogenase/epoxid... BAB1_0318 141 COG0546 Gph, Predicted phosphatases General function prediction only 82699960 Common - hypothetical protein BAB1_1142 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 82699069 Common sppA Clp protease:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type BAB1_0153 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 82699110 Common - Bacterial regulatory proteins, AsnC family:Cyclic nucleotide-binding domain:Bacterial regulatory protein, Crp family BAB1_0196 98 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 82700142 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_1337 192 COG0583 LysR, Transcriptional regulator Transcription 82700242 Common ftsZ cell division protein FtsZ BAB1_1444 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 82700742 Pathogen - hypothetical protein BAB1_1983 2 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 82700888 Common - Binding-protein-dependent transport systems inner membrane component:Cl-channel, voltage gated:Blood group Rhesus C/E and D ... BAB1_2142 230 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 82699924 Pathogen - hypothetical protein BAB1_1102 1 None None None 82700450 Common - ATP-binding region, ATPase-like:Histidine kinase BAB1_1673 85 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 82699866 Common gltX-1 glutamyl-tRNA synthetase BAB1_1034 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 82700798 Common - Glucose-methanol-choline oxidoreductase:GMC oxidoreductase BAB1_2042 93 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 82699140 Common - Amidohydrolase 2 BAB1_0236 51 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 82700162 Pathogen - hypothetical protein BAB1_1361 1 None None None 82699076 Common - Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2:PTS IIA-like nitrogen-regulatory protein PtsN BAB1_0160 139 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 82699738 Common cobS cobalamin synthase BAB1_0885 90 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 82699205 Common - allantoate amidohydrolase BAB1_0310 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 82700313 Common lrp-1 Bacterial regulatory proteins, AsnC family BAB1_1521 162 COG1522 Lrp, Transcriptional regulators Transcription 82699298 Common atpE F0F1 ATP synthase subunit C BAB1_0412 39 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 82699473 Common - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_0601 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82699445 Common rbsB-1 Periplasmic binding protein/LacI transcriptional regulator BAB1_0567 94 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 82699166 Pathogen - hypothetical protein BAB1_0266 1 None None None 82700462 Pathogen - hypothetical protein BAB1_1686 1 None None None 82699072 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0156 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 82699217 Common - Acriflavin resistance protein:Hydrophobe/amphiphile efflux-1 HAE1 BAB1_0323 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 82700652 Common - hypothetical protein BAB1_1884 26 COG3898 COG3898, Uncharacterized membrane-bound protein Function unknown 82699367 Pathogen - hypothetical protein BAB1_0481 1 None None None 82700637 Common - ErfK/YbiS/YcfS/YnhG BAB1_1867 86 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 82700117 Pathogen - hypothetical protein BAB1_1308 2 None None None 82699062 Common - DNA mismatch repair protein BAB1_0146 199 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 82700630 Common - SAM (and some other nucleotide) binding motif:Helix-turn-helix motif BAB1_1860 43 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 82699308 Pathogen - hypothetical protein BAB1_0422 1 None None None 82700631 Common - AzlC protein BAB1_1861 76 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 82699498 Common - outer membrane lipoprotein-related protein BAB1_0630 19 COG4520 LipA, Surface antigen Cell envelope biogenesis, outer membrane 82700628 Common rplU 50S ribosomal protein L21 BAB1_1858 214 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 82700476 Common - Bile acid:sodium symporter BAB1_1700 100 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 82700864 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase BAB1_2113 189 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 82699242 Common mscL Large-conductance mechanosensitive channel BAB1_0348 107 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 82699121 Common - TENA/THI-4 protein BAB1_0213 74 COG0819 TenA, Putative transcription activator Transcription 82699835 Pathogen - hypothetical protein BAB1_1001 1 None None None 82700155 Pathogen - hypothetical protein BAB1_1352 2 None None None 82700189 Common - hypothetical protein BAB1_1391 4 None None None 82699653 Common - SmpA/OmlA BAB1_0794 35 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 82700121 Common cobC Aminotransferase, class-I:Aminotransferase, class I and II BAB1_1315 152 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 82699777 Common aroQ 3-dehydroquinate dehydratase BAB1_0926 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 82700228 Common - hypothetical protein BAB1_1430 20 COG4702 COG4702, Uncharacterized conserved protein Function unknown 82699884 Common - ATP/GTP-binding site motif A (P-loop):YcjX-like protein BAB1_1054 42 COG3106 COG3106, Predicted ATPase General function prediction only 82699542 Common - Cyclic nucleotide-binding domain:Bacterial regulatory protein, Crp family BAB1_0674 141 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 82700661 Common - Protein of unknown function DUF6 BAB1_1893 71 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 82699171 Common - hypothetical protein BAB1_0271 7 None None None 82700112 Common - SAM (and some other nucleotide) binding motif:Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase:Precorrin-... BAB1_1303 102 COG2241 CobL, Precorrin-6B methylase 1 Coenzyme metabolism 82699795 Common anmK anhydro-N-acetylmuramic acid kinase BAB1_0944 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 82700621 Common proA gamma-glutamyl phosphate reductase BAB1_1851 188 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 82698963 Common pheA prephenate dehydratase BAB1_0034 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 82700221 Common - hypothetical protein BAB1_1423 40 COG3814 COG3814, Uncharacterized protein conserved in bacteria Function unknown 82698969 Common qoxD Prokaryotic Cytochrome C oxidase subunit IV BAB1_0042 57 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 82699033 Common - SAM (and some other nucleotide) binding motif:Generic methyltransferase BAB1_0111 139 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 82700586 Common - hypothetical protein BAB1_1814 8 COG5468 COG5468, Predicted secreted (periplasmic) protein Function unknown 82699892 Common - ribonucleotide-diphosphate reductase subunit alpha BAB1_1063 181 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 82698999 Pathogen - hypothetical protein BAB1_0073 2 None None None 82700732 Common - ExsB protein BAB1_1973 171 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 82700674 Common rplS 50S ribosomal protein L19 BAB1_1906 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 82700013 Common - Protein of unknown function DUF218 BAB1_1199 88 COG1434 COG1434, Uncharacterized conserved protein Function unknown 82699703 Pathogen - hypothetical protein BAB1_0846 2 None None None 82699555 Common - Glycine cleavage T protein (aminomethyl transferase) BAB1_0687 112 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 82699132 Common - Binding-protein-dependent transport systems inner membrane component BAB1_0225 127 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 82700137 Pathogen - hypothetical protein BAB1_1332 1 None None None 82699108 Common - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein BAB1_0194 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 82700338 Common - Protein of unknown function DUF152 BAB1_1546 182 COG1496 COG1496, Uncharacterized conserved protein Function unknown 82700356 Pathogen - hypothetical protein BAB1_1564 1 None None None 82699694 Common - Beta-lactamase-like BAB1_0837 155 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 82700780 Pathogen - hypothetical protein BAB1_2024 1 None None None 82700786 Common aroK Shikimate kinase:ATP/GTP-binding site motif A (P-loop) BAB1_2030 194 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 82698983 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_0057 182 COG0583 LysR, Transcriptional regulator Transcription 82699454 Common - hypothetical protein BAB1_0579 46 COG4448 AnsA, L-asparaginase II Amino acid transport and metabolism 82699478 Common - hypothetical protein BAB1_0606 18 COG5402 COG5402, Uncharacterized conserved protein Function unknown 82698989 Common - hypothetical protein BAB1_0063 3 None None None 82700537 Common - N-formylglutamate amidohydrolase BAB1_1763 41 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 82699418 Common - transposase BAB1_0538 39 None None None 82698992 Common dnaE2 error-prone DNA polymerase BAB1_0066 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 82700448 Common - two-component response regulator BAB1_1671 126 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 82700917 Common - N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, N12 class:Methyltransferase small BAB1_2171 53 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 82699130 Common - Binding-protein-dependent transport systems inner membrane component:Basic helix-loop-helix dimerization domain bHLH:Pollen a... BAB1_0223 151 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 82699664 Common - hypothetical protein BAB1_0805 14 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 82700347 Common - MaoC-like dehydratase BAB1_1555 59 COG2030 MaoC, Acyl dehydratase Lipid metabolism 82699394 Pathogen - hypothetical protein BAB1_0513 2 None None None 82700533 Common rpmJ 50S ribosomal protein L36 BAB1_1759 69 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 82699439 Common - Phosphoglucomutase/phosphomannomutase:Phosphogluc omutase/phosphomannomutase alpha/beta/alpha domain I:Phosphoglucomutase/phos... BAB1_0560 229 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 82699786 Common - IS711, transposase orfB BAB1_0935 55 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699633 Common - HRDC domain:3'-5' exonuclease:Ribonuclease D BAB1_0774 123 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 82699572 Common ksgA dimethyladenosine transferase BAB1_0704 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 82699432 Common - transposase BAB1_0552 40 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82700668 Common sdhB succinate dehydrogenase iron-sulfur subunit BAB1_1900 192 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 82700327 Pathogen - C-5 cytosine-specific DNA methylase BAB1_1535 1 None None None 82700149 Common - low PH-induced protein A BAB1_1346 55 COG0392 COG0392, Predicted integral membrane protein Function unknown 82700329 Common - Bacterial regulatory protein, MarR family BAB1_1537 39 COG1846 MarR, Transcriptional regulators Transcription 82700845 Common - ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein, C-term... BAB1_2093 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82700438 Common - HhH-GPD BAB1_1661 87 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 82699468 Common - hypothetical protein BAB1_0596 13 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 82700051 Common rplR 50S ribosomal protein L18 BAB1_1239 213 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 82699662 Pathogen - hypothetical protein BAB1_0803 2 None None None 82699674 Common - hypothetical protein BAB1_0817 3 None None None 82699515 Common amn AMP nucleosidase BAB1_0647 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 82698982 Pathogen - hypothetical protein BAB1_0056 1 None None None 82699913 Common - Nitroreductase family BAB1_1091 80 COG0778 NfnB, Nitroreductase Energy production and conversion 82699371 Pathogen - hypothetical protein BAB1_0485 1 None None None 82699043 Common - Lipocalin-related protein and Bos/Can/Equ allergen:ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-termin... BAB1_0121 244 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 82700676 Pathogen - hypothetical protein BAB1_1910 4 COG4747 COG4747, ACT domain-containing protein General function prediction only 82699442 Pathogen - hypothetical protein BAB1_0564 1 None None None 82699854 Common - Beta tubulin BAB1_1022 33 COG5387 COG5387, Chaperone required for the assembly of the mitochondrial F1-ATPase Posttranslational modification, protein turnover, chaperones 82700382 Pathogen - hypothetical protein BAB1_1592 1 None None None 82699321 Common - RNA-binding region RNP-1 (RNA recognition motif):FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal BAB1_0435 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 82700168 Common - TonB-dependent receptor protein BAB1_1367 128 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 82700071 Common rpsG 30S ribosomal protein S7 BAB1_1259 247 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 82699535 Common smpB SsrA-binding protein BAB1_0667 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 82699080 Common - hypothetical protein BAB1_0164 19 COG5488 COG5488, Integral membrane protein Function unknown 82700290 Common - hypothetical protein BAB1_1496 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 82700753 Common - Mercuric reductase:Phospholipid/glycerol acyltransferase BAB1_1994 158 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 82700342 Common - Proline-rich region:ATP/GTP-binding site motif A (P-loop) BAB1_1550 30 COG0433 COG0433, Predicted ATPase General function prediction only 82699723 Common rpe Ribulose-phosphate 3-epimerase BAB1_0869 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 82699238 Common pip Alpha/beta hydrolase fold:Esterase/lipase/thioesterase, active site:Epoxide hydrolase:Prolyl aminopeptidase S33:Alpha/beta hy... BAB1_0344 96 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 82700379 Common - Major facilitator superfamily (MFS) BAB1_1589 82 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 82699259 Common - ATP/GTP-binding site motif A (P-loop) BAB1_0366 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 82700519 Common - hypothetical protein BAB1_1743 3 None None None 82700737 Common - short chain dehydrogenase BAB1_1978 228 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 82699035 Common - Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_0113 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699672 Common - O-acetylhomoserine aminocarboxypropyltransferase BAB1_0813 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 82700056 Common rplX 50S ribosomal protein L24 BAB1_1244 213 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 82700595 Common - Aldehyde dehydrogenase BAB1_1823 45 COG5360 COG5360, Uncharacterized protein conserved in bacteria Function unknown 82700928 Common - Cytosol aminopeptidase BAB1_2182 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 82699056 Common - ErfK/YbiS/YcfS/YnhG BAB1_0138 77 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 82700612 Common - hypothetical protein BAB1_1842 19 COG3619 COG3619, Predicted membrane protein Function unknown 82700217 Common - hypothetical protein BAB1_1419 16 None None None 82700525 Common - hypothetical protein BAB1_1749 41 COG3820 COG3820, Uncharacterized protein conserved in bacteria Function unknown 82699027 Common - Binding-protein-dependent transport systems inner membrane component BAB1_0105 238 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 82699945 Common - Single-strand binding protein BAB1_1126 210 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 82700446 Common - PAS-associated C-terminal domain BAB1_1669 37 COG3920 COG3920, Signal transduction histidine kinase Signal transduction mechanisms 82700274 Common - Esterase/lipase/thioesterase, active site:Prolyl aminopeptidase S33 BAB1_1476 83 COG2267 PldB, Lysophospholipase Lipid metabolism 82700904 Common lnt apolipoprotein N-acyltransferase BAB1_2158 167 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 82700088 Pathogen - hypothetical protein BAB1_1276 1 None None None 82700542 Common - Thiamin pyrophosphokinase, catalytic domain BAB1_1769 41 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 82700619 Common - Iojap-related protein BAB1_1849 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 82700485 Common tolB translocation protein TolB BAB1_1709 154 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 82700906 Common - S-adenosylmethionine synthetase BAB1_2160 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 82698951 Common - hypothetical protein BAB1_0022 17 COG4530 COG4530, Uncharacterized protein conserved in bacteria Function unknown 82699264 Common - TRAP dicarboxylate transporter-DctP subunit:Twin-arginine translocation pathway signal BAB1_0373 97 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 82700747 Common hisC histidinol-phosphate aminotransferase BAB1_1988 238 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 82699844 Common - DNA polymerase III subunit delta' BAB1_1012 243 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 82700177 Common ureC urease subunit alpha BAB1_1378 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 82699989 Common - hypothetical protein BAB1_1172 45 COG3494 COG3494, Uncharacterized protein conserved in bacteria Function unknown 82699827 Pathogen - hypothetical protein BAB1_0987 1 None None None 82699173 Common - hypothetical protein BAB1_0273 17 None None None 82699863 Common - Aminoacyl-tRNA synthetase, class I:DAHP synthetase, classII BAB1_1031 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 82700253 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase BAB1_1455 211 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 82700806 Common - Bacterial luciferase BAB1_2052 64 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 82700191 Pathogen - hypothetical protein BAB1_1393 1 None None None 82700895 Common pepS Thermophilic metalloprotease (M29) BAB1_2149 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 82700498 Common - elongation factor P BAB1_1722 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 82700575 Common - Bacterial regulatory protein, GntR family BAB1_1803 123 COG1802 GntR, Transcriptional regulators Transcription 82699139 Common soxG Sarcosine oxidase, gamma subunit BAB1_0235 21 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 82699215 Common - Bacterial regulatory protein TetR, HTH motif BAB1_0321 58 COG1309 AcrR, Transcriptional regulator Transcription 82699715 Common - phosphoribosylformylglycinamidine synthase subunit PurS BAB1_0861 117 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 82700395 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase BAB1_1607 218 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 82700685 Common - hypothetical protein BAB1_1919 5 None None None 82699548 Common - Bacterial signal peptidase S26A:Signal peptidase BAB1_0680 205 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 82699186 Common - hypothetical protein BAB1_0286 22 None None None 82699753 Common - sec-independent translocase BAB1_0902 26 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 82699599 Common purM phosphoribosylaminoimidazole synthetase BAB1_0731 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 82700286 Common - hypothetical protein BAB1_1492 2 None None None 82699627 Common - Binding-protein-dependent transport systems inner membrane component:Tetracycline resistance protein BAB1_0768 183 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 82700810 Common - Bacterial inner-membrane translocator BAB1_2056 105 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 82700821 Common hemE uroporphyrinogen decarboxylase BAB1_2067 177 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 82699199 Common - urease accessory protein UreF BAB1_0302 46 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 82699651 Common nusB transcription antitermination protein NusB BAB1_0792 172 COG0781 NusB, Transcription termination factor Transcription 82699086 Common grpE GrpE protein BAB1_0170 231 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 82699200 Common ureG-1 RecA bacterial DNA recombination protein:ATP/GTP-binding site motif A (P-loop):HypB/UreG, nucleotide-binding:Urease accessory... BAB1_0303 152 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 82699823 Common - Transglycosylase-associated protein BAB1_0981 20 COG2261 COG2261, Predicted membrane protein Function unknown 82700297 Pathogen - hypothetical protein BAB1_1503 1 None None None 82699274 Common - Cation-transporting ATPase A, P type:Copper-transporting ATPase:ATPase, E1-E2 type:Mercury scavenger protein:Haloacid dehalog... BAB1_0386 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 82700063 Common rpsS 30S ribosomal protein S19 BAB1_1251 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 82699743 Common xth-1 AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family BAB1_0892 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 82699882 Common - hypothetical protein BAB1_1052 6 None None None 82700010 Pathogen - hypothetical protein BAB1_1194 2 None None None 82699299 Common - F0F1 ATP synthase subunit B' BAB1_0413 36 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 82699360 Common radA DNA repair protein RadA BAB1_0474 216 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 82700562 Common - Eukaryotic thiol (cysteine) protease:Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_1789 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 162002874 Common ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein BAB1_1143 195 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 82700305 Common - Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal BAB1_1513 101 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 82699015 Common ccmC Cytochrome c assembly protein:Cytochrome c-type biogenesis protein CcmC BAB1_0093 124 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 82699192 Common - hypothetical protein BAB1_0295 17 None None None 82699462 Common - Haloacid dehalogenase/epoxide hydrolase:Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IA, variant 2 BAB1_0590 51 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 82699283 Common - DSBA oxidoreductase:Twin-arginine translocation pathway signal BAB1_0395 69 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 82700078 Common rplJ 50S ribosomal protein L10 BAB1_1266 211 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 82699106 Pathogen - hypothetical protein BAB1_0192 1 None None None 82700760 Common - aquaporin Z BAB1_2001 115 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 82699727 Common - 3-oxoacyl-(acyl carrier protein) synthase II BAB1_0873 168 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82700505 Common - hypothetical protein BAB1_1729 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 82699998 Common frr ribosome recycling factor BAB1_1181 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 82699316 Common - TPR repeat BAB1_0430 169 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 82699007 Common - Protein of unknown function DUF214 BAB1_0083 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 82700032 Common - hypothetical protein BAB1_1220 29 COG4321 COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis General function prediction only 82699804 Common - Glycosyl transferase, family 2 BAB1_0953 27 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 82700389 Common - Binding-protein-dependent transport systems inner membrane component BAB1_1599 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 82699521 Common - Protein of unknown function DUF161 BAB1_0653 58 COG1284 COG1284, Uncharacterized conserved protein Function unknown 82700267 Common - SAM (and some other nucleotide) binding motif:Generic methyltransferase:Bacterial regulatory protein, ArsR family BAB1_1469 146 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 82700236 Common - hypothetical protein BAB1_1438 35 COG5587 COG5587, Uncharacterized conserved protein Function unknown 82700713 Pathogen - hypothetical protein BAB1_1952 1 None None None 82700553 Common - RNA-binding S4 BAB1_1780 113 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 82699874 Pathogen - hypothetical protein BAB1_1042 1 None None None 82699600 Pathogen - hypothetical protein BAB1_0732 1 None None None 82699638 Common - hypothetical protein BAB1_0779 16 COG1714 COG1714, Predicted membrane protein/domain Function unknown 82700170 Common - Gram-negative bacterial RTX secretion protein D:Secretion protein HlyD BAB1_1371 100 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 82700184 Common - hypothetical protein BAB1_1386 11 None None None 82699326 Common - Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain BAB1_0440 144 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 82699379 Common coxA Cytochrome c oxidase, subunit I BAB1_0493 167 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 82700049 Common rpmD 50S ribosomal protein L30 BAB1_1237 84 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 82698940 Common - Binding-protein-dependent transport systems inner membrane component BAB1_0008 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 82700081 Common nusG transcription antitermination protein NusG BAB1_1269 215 COG0250 NusG, Transcription antiterminator Transcription 82699603 Pathogen - Proline-rich region:Proline-rich extensin BAB1_0735 2 None None None 82699428 Common - transposase BAB1_0548 23 None None None 82700079 Common rplA 50S ribosomal protein L1 BAB1_1267 237 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 82699430 Pathogen - IS711, transposase orfA BAB1_0550 1 None None None 82700724 Common - Tetracycline resistance protein:NADH-ubiquinone oxidoreductase, chain 4:General substrate transporter:Major facilitator super... BAB1_1964 83 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 82700209 Common - NAD binding site:Pyridine nucleotide-disulphide oxidoreductase, class I:FAD-dependent pyridine nucleotide-disulphide oxidored... BAB1_1411 137 COG2081 COG2081, Predicted flavoproteins General function prediction only 82700672 Common - GCN5-related N-acetyltransferase BAB1_1904 10 COG0456 RimI, Acetyltransferases General function prediction only 82699720 Pathogen - hypothetical protein BAB1_0866 1 None None None 82699523 Common - Antifreeze protein, type I BAB1_0655 9 None None None 82699563 Pathogen - hypothetical protein BAB1_0695 2 None None None 82699502 Common - Cytochrome C biogenesis protein BAB1_0634 91 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 82700502 Common - hypothetical protein BAB1_1726 122 COG1360 MotB, Flagellar motor protein Cell motility and secretion 82699319 Common glyS glycyl-tRNA synthetase subunit beta BAB1_0433 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 82700060 Common rplP 50S ribosomal protein L16 BAB1_1248 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 82699332 Common - Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal:Heat shock protein DnaJ BAB1_0446 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 82699376 Common - Modulator of DNA gyrase BAB1_0490 169 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 82699290 Common - hypothetical protein BAB1_0404 20 COG4649 COG4649, Uncharacterized protein conserved in bacteria Function unknown 82699751 Common - Conserved hypothetical protein 281 BAB1_0900 141 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 82700231 Common - hypothetical protein BAB1_1433 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 82699437 Common - Transposase, IS4 BAB1_0558 58 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699460 Common - ATP/GTP-binding site motif A (P-loop) BAB1_0588 78 COG0433 COG0433, Predicted ATPase General function prediction only 82699389 Common - GCN5-related N-acetyltransferase BAB1_0508 137 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 82698958 Common recR recombination protein RecR BAB1_0029 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 82699568 Pathogen - hypothetical protein BAB1_0700 1 None None None 82700226 Pathogen - hypothetical protein BAB1_1428 2 None None None 82699969 Common - Dehydrogenase, E1 component:Mitochondrial substrate carrier BAB1_1152 171 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 82699465 Common - Esterase/lipase/thioesterase, active site:Prolyl oligopeptidase:Prolyl oligopeptidase serine protease (S9A):Prolyl endopeptid... BAB1_0593 108 COG1770 PtrB, Protease II Amino acid transport and metabolism 82700185 Common - Cobalt transport protein BAB1_1387 82 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 82699341 Common - 3,4-Dihydroxy-2-butanone 4-phosphate synthase:GTP cyclohydrolase II BAB1_0455 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 82700578 Common atpC F0F1 ATP synthase subunit epsilon BAB1_1806 167 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 82700374 Pathogen - hypothetical protein BAB1_1584 1 None None None 82699593 Common - hypothetical protein BAB1_0725 8 COG5511 COG5511, Bacteriophage capsid protein General function prediction only 82700399 Common - hypothetical protein BAB1_1611 65 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 82699105 Common - aminotransferase BAB1_0191 236 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 82700813 Common - ParB-like nuclease:ParB-like partition protein BAB1_2059 181 COG1475 Spo0J, Predicted transcriptional regulators Transcription 82700038 Common - MotY protein:Bacterial outer membrane protein:OmpA/MotB domain BAB1_1226 168 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 82700599 Common - Protein of unknown function DUF477 BAB1_1829 91 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 82700298 Common - Neutral zinc metallopeptidase, zinc-binding region:Putative neutral zinc metallopeptidase BAB1_1504 87 COG2321 COG2321, Predicted metalloprotease General function prediction only 82700754 Common - hypothetical protein BAB1_1995 30 COG1434 COG1434, Uncharacterized conserved protein Function unknown 82700572 Common - proline racemase, putative BAB1_1800 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 82699405 Common ppdK pyruvate phosphate dikinase BAB1_0525 234 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 82699756 Common surE stationary phase survival protein SurE BAB1_0905 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 82700520 Common - AMP-dependent synthetase and ligase BAB1_1744 216 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 82699650 Common ribH riboflavin synthase subunit beta BAB1_0791 204 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 82700250 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase BAB1_1452 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 82699934 Common tgt queuine tRNA-ribosyltransferase BAB1_1115 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 82700882 Common gshb glutathione synthetase BAB1_2135 137 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 82700403 Common - hypothetical protein BAB1_1615 14 None None None 82700068 Common rpsJ 30S ribosomal protein S10 BAB1_1256 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 82700200 Common - K+ potassium transporter BAB1_1402 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 82699597 Common - hypothetical protein BAB1_0729 12 None None None 82699718 Common - HpcH/HpaI aldolase BAB1_0864 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 82699992 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase BAB1_1175 159 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 82700493 Common - hypothetical protein BAB1_1717 18 COG5317 COG5317, Uncharacterized protein conserved in bacteria Function unknown 82700401 Common - hypothetical protein BAB1_1613 28 COG5385 COG5385, Uncharacterized protein conserved in bacteria Function unknown 82700172 Pathogen - ATP/GTP-binding site motif A (P-loop) BAB1_1373 1 None None None 82700897 Common - Glycoprotease (M22) metalloprotease BAB1_2151 190 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 82699527 Common - ATP/GTP-binding site motif A (P-loop):Porin, alpha proteobacteria type BAB1_0659 13 None None None 82700193 Common - Endonuclease/exonuclease/phosphatase family BAB1_1395 13 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 82700355 Common - purine nucleoside permease BAB1_1563 11 COG5042 NUP, Purine nucleoside permease Nucleotide transport and metabolism 82700471 Common purA adenylosuccinate synthetase BAB1_1695 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 82699276 Common - 4Fe-4S ferredoxin, iron-sulfur binding domain BAB1_0388 77 COG0348 NapH, Polyferredoxin Energy production and conversion 82700275 Common - Bacterial ring hydroxylating dioxygenase, alpha subunit:Immunoglobulin/major histocompatibility complex:Rieske [2Fe-2S] domain BAB1_1481 83 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 82699771 Common - NADH dehydrogenase BAB1_0920 38 COG3761 COG3761, NADH:ubiquinone oxidoreductase 17.2 kD subunit Energy production and conversion 82699060 Common mviN Virulence factor MVIN-like BAB1_0142 189 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 82699825 Common - Phage integrase BAB1_0983 44 COG0582 XerC, Integrase DNA replication, recombination, and repair 82699203 Common - transporter, putative BAB1_0306 163 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 82700855 Common - hypothetical protein BAB1_2104 59 COG3893 COG3893, Inactivated superfamily I helicase DNA replication, recombination, and repair 82700190 Common - hypothetical protein BAB1_1392 8 COG3467 COG3467, Predicted flavin-nucleotide-binding protein General function prediction only 82699351 Common - Conserved hypothetical protein 730 BAB1_0465 151 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 82700478 Common glmM Phosphoglucomutase/phosphomannomutase:Phosphogluc omutase/phosphomannomutase C terminal:Phosphoglucomutase/phosphomannomutase ... BAB1_1702 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 82699048 Common - NAD binding site:Zinc-containing alcohol dehydrogenase superfamily:Zinc-containing alcohol dehydrogenase BAB1_0128 209 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 82700641 Common - SAM (and some other nucleotide) binding motif:N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, N... BAB1_1871 223 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 82699265 Common - hypothetical protein BAB1_0374 33 COG3257 GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization General function prediction only 82700767 Pathogen - hypothetical protein BAB1_2008 1 None None None 82699944 Pathogen - hypothetical protein BAB1_1125 1 None None None 82700766 Common - hypothetical protein BAB1_2007 38 COG3786 COG3786, Uncharacterized protein conserved in bacteria Function unknown 82699962 Common - CinA, C-terminal BAB1_1144 192 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 82699531 Common - hypothetical protein BAB1_0663 26 COG3743 COG3743, Uncharacterized conserved protein Function unknown 82700793 Common - D-alanyl-D-alanine carboxypeptidase 1, S11 family BAB1_2037 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 82700543 Common tbpA thiamin transporter substrate binding subunit BAB1_1770 62 COG4143 TbpA, ABC-type thiamine transport system, periplasmic component Coenzyme metabolism 82700711 Common - hypothetical protein BAB1_1948 18 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 82700085 Pathogen - hypothetical protein BAB1_1273 1 None None None 82699142 Common - Bacterial extracellular solute-binding protein, family 1 BAB1_0238 95 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 82699520 Common - hypothetical protein BAB1_0652 19 None None None 82699489 Common - hypothetical protein BAB1_0617 18 COG5437 COG5437, Predicted secreted protein Function unknown 82699346 Common - Ribosomal protein P2 BAB1_0460 25 COG3753 COG3753, Uncharacterized protein conserved in bacteria Function unknown 82700773 Common - hypothetical protein BAB1_2017 16 None None None 82698970 Pathogen - hypothetical protein BAB1_0043 1 None None None 82699009 Common - hypothetical protein BAB1_0087 30 None None None 82699609 Common - Exonuclease BAB1_0741 4 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 82699029 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0107 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 82700552 Pathogen - hypothetical protein BAB1_1779 1 None None None 82699123 Common thiE thiamine-phosphate pyrophosphorylase BAB1_0215 200 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 82699833 Common - glycosyltransferase BAB1_0999 6 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 82700902 Common - hypothetical protein BAB1_2156 128 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 82700816 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA BAB1_2062 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 82699216 Common - Secretion protein HlyD BAB1_0322 138 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 82700730 Common etfA Antifreeze protein, type I:Electron transfer flavoprotein, alpha subunit BAB1_1971 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 82700214 Common - Band 7 protein:Stomatin BAB1_1416 178 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 82699002 Common - hypothetical protein BAB1_0076 37 COG3339 COG3339, Uncharacterized conserved protein Function unknown 82699268 Common - Ferredoxin:Molybdopterin dehydrogenase, FAD-binding:[2Fe-2S]-binding:CO dehydrogenase flavoprotein C-terminal domain:2Fe-2S f... BAB1_0377 122 COG4630 XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A Nucleotide transport and metabolism 82699324 Common - hypothetical protein BAB1_0438 10 None None None 82699611 Common - GCN5-related N-acetyltransferase BAB1_0743 13 None None None 82699258 Pathogen - hypothetical protein BAB1_0365 1 None None None 82699851 Common - RNA-binding S4:Pseudouridine synthase:Pseudouridine synthase, Rlu:Pseudouridine synthase, RluD BAB1_1019 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 82699805 Common ppnK inorganic polyphosphate/ATP-NAD kinase BAB1_0954 236 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 82699678 Pathogen - hypothetical protein BAB1_0821 1 None None None 82699081 Common - Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding, class 1:Endonuclease III, HhH:Endonuclease III/Nth BAB1_0165 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 82700512 Pathogen - hypothetical protein BAB1_1736 1 None None None 82699990 Common lpxA UDP-N-acetylglucosamine acyltransferase BAB1_1173 147 COG1043 LpxA, Acyl- acyl carrier protein 82700509 Common - RNA-binding region RNP-1 (RNA recognition motif):Integral membrane protein TerC family BAB1_1733 117 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 82699762 Common - hypothetical protein BAB1_0911 36 COG3737 COG3737, Uncharacterized conserved protein Function unknown 82700265 Common - Auxin Efflux Carrier BAB1_1467 111 COG0679 COG0679, Predicted permeases General function prediction only 82699578 Common - leucyl aminopeptidase BAB1_0710 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 82700921 Common - Ferric-uptake regulator BAB1_2175 136 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 82698995 Common - hypothetical protein BAB1_0069 110 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 82699046 Common - Esterase/lipase/thioesterase, active site:Putative esterase BAB1_0124 97 COG0627 COG0627, Predicted esterase General function prediction only 82699492 Common - hypothetical protein BAB1_0620 26 COG5448 COG5448, Uncharacterized conserved protein Function unknown 82700836 Common hisB imidazoleglycerol-phosphate dehydratase BAB1_2082 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 82699955 Common trkA potassium transporter peripheral membrane component BAB1_1137 150 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 82700320 Common - Thioesterase superfamily BAB1_1528 114 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 82700871 Common rplT 50S ribosomal protein L20 BAB1_2124 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 82700072 Common rpsL 30S ribosomal protein S12 BAB1_1260 240 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 82700486 Common tolA Proline-rich region:Proline-rich extensin:Histamine H3 receptor BAB1_1710 18 COG5373 COG5373, Predicted membrane protein Function unknown 82700002 Common - ATP/GTP-binding site motif A (P-loop) BAB1_1186 19 None None None 82699279 Common ccoO Cytochrome c heme-binding site:Cytochrome C oxidase, mono-heme subunit/FixO BAB1_0391 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 82700735 Common - Protein of unknown function DUF80 BAB1_1976 131 COG2096 COG2096, Uncharacterized conserved protein Function unknown 82699613 Pathogen - hypothetical protein BAB1_0745 1 None None None 82699558 Common - hypothetical protein BAB1_0690 6 None None None 82699953 Common hfq RNA-binding protein Hfq BAB1_1134 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 82700349 Common - Cytochrome c heme-binding site:Ribosomal protein P2:Cytochrome c1 BAB1_1557 72 COG2857 CYT1, Cytochrome c1 Energy production and conversion 82699764 Common - tRNA (uracil-5-)-methyltransferase Gid BAB1_0913 98 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 82699901 Common - ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop) BAB1_1072 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 82700775 Common cadA-1 DNA gyrase, subunit B:H+ transporting ATPase, proton pump:Cadmium-transporting ATPase:ATP/GTP-binding site motif A (P-loop):A... BAB1_2019 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 82700880 Common - hypothetical protein BAB1_2133 44 COG5470 COG5470, Uncharacterized conserved protein Function unknown 82700220 Common - Beta and gamma crystallin:Bacterial regulatory protein TetR, HTH motif BAB1_1422 88 COG1309 AcrR, Transcriptional regulator Transcription 82699709 Common - Glutaredoxin:Glutaredoxin-related protein BAB1_0855 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 82700046 Common adk adenylate kinase BAB1_1234 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 82699784 Common - peptide chain release factor 2 BAB1_0933 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 82700227 Common - FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal BAB1_1429 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 82700527 Common - hypothetical protein BAB1_1751 4 COG5509 COG5509, Uncharacterized small protein containing a coiled-coil domain Function unknown 82700504 Common rpmE 50S ribosomal protein L31 BAB1_1728 113 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 82700846 Common - ATP/GTP-binding site motif A (P-loop) BAB1_2094 77 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 82698993 Common - hypothetical protein BAB1_0067 65 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 82700333 Common csaA t-RNA-binding region BAB1_1541 121 COG0073 ARC1, EMAP domain General function prediction only 82699842 Common - D-alanyl-D-alanine carboxypeptidase 1, S11 family BAB1_1010 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 82699513 Common - NAD binding site:ATP/GTP-binding site motif A (P-loop):Aromatic-ring hydroxylase:Electron transfer flavoprotein-ubiquinone ox... BAB1_0645 108 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 82700531 Common - 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxyl ate (AIR) carboxylase BAB1_1757 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 82699169 Pathogen - hypothetical protein BAB1_0269 1 None None None 82700698 Common - elongator protein 3 BAB1_1933 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 82699286 Common - hypothetical protein BAB1_0400 18 COG4129 COG4129, Predicted membrane protein Function unknown 82699905 Common - GCN5-related N-acetyltransferase BAB1_1076 31 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 82700312 Pathogen - hypothetical protein BAB1_1520 1 None None None 82699392 Common - lipoprotein, putative BAB1_0511 10 None None None 82699150 Common - Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_0246 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82700153 Common - Binding-protein-dependent transport systems inner membrane component BAB1_1350 231 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 82699975 Pathogen - hypothetical protein BAB1_1158 1 None None None 162002876 Common purN phosphoribosylglycinamide formyltransferase BAB1_0730 221 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 82700243 Common ftsA Heat shock protein Hsp70:Cell division protein FtsA BAB1_1445 183 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 82700330 Common - Response regulator receiver:Transcriptional regulatory protein, C terminal BAB1_1538 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82700580 Common - F0F1 ATP synthase subunit gamma BAB1_1808 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 82699113 Common glpR Bacterial regulatory protein, DeoR family BAB1_0199 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 82700132 Common cobN cobaltochelatase BAB1_1326 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 82698942 Common - Bacterial extracellular solute-binding protein, family 5 BAB1_0010 151 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 82700617 Common - hypothetical protein BAB1_1847 2 None None None 82700414 Common - Bacterial periplasmic spermidine/putrescine-binding protein:Bacterial extracellular solute-binding protein, family 1 BAB1_1628 129 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 82699894 Common - NUDIX hydrolase BAB1_1065 31 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 82699686 Common nuoH NADH dehydrogenase subunit H BAB1_0829 190 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 82700029 Common murI glutamate racemase BAB1_1217 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 82700831 Common - Smr protein/MutS2 C-terminal BAB1_2077 85 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 82700838 Common hisH imidazole glycerol phosphate synthase subunit HisH BAB1_2084 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 82700145 Common - Mechanosensitive (MS) ion channel:Mechanosensitive (MS) ion channel subdomain BAB1_1342 193 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 82699980 Common trpD anthranilate phosphoribosyltransferase BAB1_1163 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 82700099 Common recJ Phosphoesterase, RecJ-like:Phosphoesterase, DHHA1:Bacterial RecJ exonuclease BAB1_1290 195 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 82700434 Common - Basic helix-loop-helix dimerization domain bHLH BAB1_1657 37 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 82699676 Common - hypothetical protein BAB1_0819 2 None None None 82700129 Common - Protein of unknown function DUF81 BAB1_1323 105 COG0730 COG0730, Predicted permeases General function prediction only 82700092 Common - hypothetical protein BAB1_1280 21 None None None 82700469 Common - Basic-leucine zipper (bZIP) transcription factor BAB1_1693 13 None None None 82700658 Common - YciI-like protein BAB1_1890 47 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 82699796 Common qacH Small multidrug resistance protein BAB1_0945 146 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 82700718 Common - Arginase/agmatinase/formiminoglutamase BAB1_1958 151 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 82700918 Common fabI-2 enoyl-(acyl carrier protein) reductase BAB1_2172 231 COG0623 FabI, Enoyl- acyl-carrier-protein 82699936 Common - ATP/GTP-binding site motif A (P-loop):Peptidyl-prolyl cis-trans isomerase, cyclophilin type BAB1_1117 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 82700124 Common cbiD cobalt-precorrin-6A synthase BAB1_1318 83 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 82700055 Common rplE 50S ribosomal protein L5 BAB1_1243 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 82699013 Common ccmA ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Heme exporter protein CcmA BAB1_0091 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 82699864 Common - Prokaryotic diacylglycerol kinase BAB1_1032 82 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 82699549 Common rnc ribonuclease III BAB1_0681 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 82700823 Common maf-2 Maf-like protein BAB1_2069 188 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 82700363 Common - Chaperonin clpA/B:AAA ATPase BAB1_1573 172 COG0714 COG0714, MoxR-like ATPases General function prediction only 82699822 Pathogen - hypothetical protein BAB1_0980 1 None None None 82699696 Common - hypothetical protein BAB1_0839 20 COG5454 COG5454, Predicted secreted protein Function unknown 82699916 Common - D-alanyl-D-alanine carboxypeptidase 1, S11 family BAB1_1094 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 82699688 Common nuoJ NADH dehydrogenase subunit J BAB1_0831 69 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 82700603 Common - chorismate mutase BAB1_1833 31 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 82700788 Common xerD site-specific tyrosine recombinase XerD BAB1_2032 221 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 82699362 Common cfa SAM (and some other nucleotide) binding motif:Generic methyltransferase:Cyclopropane-fatty-acyl-phospholipid synthase BAB1_0476 142 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 82700108 Common sfsA sugar fermentation stimulation protein A BAB1_1299 106 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 82699065 Common - tRNA/rRNA methyltransferase (SpoU) BAB1_0149 214 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 82699077 Common - hypothetical protein BAB1_0161 13 COG5568 COG5568, Uncharacterized small protein Function unknown 82700103 Common - aminotransferase BAB1_1294 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 82699004 Common - 2`-5` RNA ligase, putative BAB1_0080 87 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 82700460 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Phosphoribulokinase BAB1_1684 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 82699472 Common - hypothetical protein BAB1_0600 4 None None None 82699164 Pathogen - hypothetical protein BAB1_0264 1 None None None 82700453 Common - hypothetical protein BAB1_1676 23 None None None 82700484 Pathogen - hypothetical protein BAB1_1708 1 None None None 82700785 Common aroB 3-dehydroquinate synthase BAB1_2029 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 82700346 Common - MaoC-like dehydratase BAB1_1554 64 COG2030 MaoC, Acyl dehydratase Lipid metabolism 82699402 Common - DSBA oxidoreductase:Twin-arginine translocation pathway signal BAB1_0521 92 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 82700166 Common - Helix-turn-helix, AraC type:FecCD transport family:Sodium:dicarboxylate symporter:SecY protein BAB1_1365 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 82699815 Common valS valyl-tRNA synthetase BAB1_0966 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700708 Pathogen - hypothetical protein BAB1_1945 1 None None None 82699131 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0224 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 82700636 Common - Peptidase M23/M37 BAB1_1866 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 82699640 Common - enoyl-CoA hydratase BAB1_0781 167 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 82699303 Common - hypothetical protein BAB1_0417 15 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 82700118 Common - phospholipase/carboxylesterase family protein BAB1_1309 6 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 82699224 Pathogen - hypothetical protein BAB1_0330 1 None None None 82699357 Common - Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_0471 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699458 Common - Mg2+ transporter protein, CorA-like BAB1_0583 153 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 82699419 Common - Integrase, catalytic domain BAB1_0539 66 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699778 Common - DSBA oxidoreductase BAB1_0927 100 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 82699702 Common dnaE DNA polymerase III subunit alpha BAB1_0845 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 82700648 Common grxC Glutaredoxin:Thioredoxin type domain BAB1_1879 119 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 82700251 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase BAB1_1453 217 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 82699098 Common - hypothetical protein BAB1_0184 8 None None None 82699943 Common - Bacterial regulatory protein, GntR family BAB1_1124 144 COG2188 PhnF, Transcriptional regulators Transcription 82699300 Common atpF F0F1 ATP synthase subunit B BAB1_0414 18 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 82700421 Common omp31-1 OmpA-like transmembrane domain BAB1_1639 27 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 82699586 Common moaD ThiamineS BAB1_0718 82 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 82699574 Common - peptidyl-prolyl cis-trans isomerase, putative BAB1_0706 64 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 82700393 Common - Bacterial regulatory protein LysR, HTH motif:Bacterial regulatory protein, ArsR family BAB1_1605 131 COG0640 ArsR, Predicted transcriptional regulators Transcription 82699369 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BAB1_0483 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699495 Common - hypothetical protein BAB1_0627 4 None None None 82699537 Common - Protein of unknown function DUF88 BAB1_0669 67 COG1432 COG1432, Uncharacterized conserved protein Function unknown 82700215 Common folA Dihydrofolate reductase BAB1_1417 147 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 82700565 Common - Leu/Ile/Val-binding protein family:Extracellular ligand-binding receptor BAB1_1792 141 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 82699133 Common - Substrate-binding region of ABC-type glycine betaine transport system BAB1_0226 87 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 82699387 Common - hypothetical protein BAB1_0506 126 COG1678 COG1678, Putative transcriptional regulator Transcription 82699083 Pathogen - hypothetical protein BAB1_0167 1 None None None 82700529 Pathogen - hypothetical protein BAB1_1755 1 None None None 82699348 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase BAB1_0462 225 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 82700302 Common - ABC transporter BAB1_1510 84 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 82699125 Common - ThiamineS BAB1_0217 24 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 82699711 Common - phosphoribosylformylglycinamidine synthase II BAB1_0857 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 82699187 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase BAB1_0287 211 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 82699807 Common - Protein of unknown function, HesB/YadR/YfhF BAB1_0956 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 82699180 Common - zinc-binding protein BAB1_0280 28 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 82700066 Common rplD 50S ribosomal protein L4 BAB1_1254 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 82700625 Common - GCN5-related N-acetyltransferase BAB1_1855 23 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 82700930 Common - formamidopyrimidine-DNA glycosylase BAB1_2184 178 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 82700514 Common - hypothetical protein BAB1_1738 11 None None None 82700884 Common - Rare lipoprotein A BAB1_2138 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 82700911 Common infB translation initiation factor IF-2 BAB1_2165 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 82700602 Common rpsP 30S ribosomal protein S16 BAB1_1832 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 82700609 Common - hypothetical protein BAB1_1839 3 None None None 82700074 Common - hypothetical protein BAB1_1262 4 None None None 82698960 Common - DNA polymerase III subunits gamma and tau BAB1_0031 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 82700567 Common - Leu/Ile/Val-binding protein family:Extracellular ligand-binding receptor BAB1_1794 140 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 82700899 Common - Phospholipid/glycerol acyltransferase BAB1_2153 106 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 82700174 Pathogen - hypothetical protein BAB1_1375 1 None None None 82699923 Pathogen - hypothetical protein BAB1_1101 1 None None None 82699482 Common - Phage portal protein, HK97 family:Phage portal protein BAB1_0610 60 COG4695 COG4695, Phage-related protein Function unknown 82699798 Common - Aminotransferase, class V BAB1_0947 231 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 82699889 Common - NAD binding site:Adrenodoxin reductase:Pyridine nucleotide-disulphide oxidoreductase, class I:FAD-dependent pyridine nucleoti... BAB1_1060 120 COG2081 COG2081, Predicted flavoproteins General function prediction only 82700277 Common - PhnA protein BAB1_1483 105 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 82698934 Common dnaN DNA polymerase III subunit beta BAB1_0002 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 82700031 Common - Family of unknown function ThiJ/PfpI:Intracellular protease PfpI BAB1_1219 145 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 82699278 Common ccoQ cytochrome c oxidase, cbb3-type, CcoQ subunit BAB1_0390 7 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 82699773 Common - hypothetical protein BAB1_0922 28 COG4765 COG4765, Uncharacterized protein conserved in bacteria Function unknown 82699949 Common - Disease resistance protein:Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):Peptidase family S16:ATP-dependent proteas... BAB1_1130 212 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 82699245 Common - Glycosyl transferase, family 25 BAB1_0351 23 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 82700726 Common - methionine gamma-lyase BAB1_1966 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 82699288 Common bacA transport protein BAB1_0402 58 COG1133 SbmA, ABC-type long-chain fatty acid transport system, fused permease and ATPase components Lipid metabolism 82700500 Pathogen - hypothetical protein BAB1_1724 1 None None None 82699791 Common - Protein of unknown function DUF455 BAB1_0940 48 COG2833 COG2833, Uncharacterized protein conserved in bacteria Function unknown 82700233 Common - Electron transport protein SCO1/SenC BAB1_1435 98 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 82700545 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Thiamine ABC transporter, ATP-binding protein BAB1_1772 249 COG3840 ThiQ, ABC-type thiamine transport system, ATPase component Coenzyme metabolism 82699525 Common - histidinol-phosphate aminotransferase BAB1_0657 223 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 82699022 Common - transcriptional regulator, putative BAB1_0100 25 COG1522 Lrp, Transcriptional regulators Transcription 82700270 Pathogen - hypothetical protein BAB1_1472 1 None None None 82699079 Pathogen - hypothetical protein BAB1_0163 1 None None None 82700263 Common - Glycoside hydrolase, family 25 BAB1_1465 45 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 82699556 Common pyrC-1 dihydroorotase BAB1_0688 210 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 82700281 Pathogen - hypothetical protein BAB1_1487 1 None None None 82699591 Common - Aminoacyl-tRNA synthetase, class I:Glutathione S-transferase, N-terminal BAB1_0723 67 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 82700762 Common - hypothetical protein BAB1_2003 35 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 82700247 Common murC UDP-N-acetylmuramate--L-alanine ligase BAB1_1449 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 82699897 Common - Universal stress protein (Usp) BAB1_1068 36 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 82700597 Common - ATP/GTP-binding site motif A (P-loop):Bacterial NAD-glutamate dehydrogenase BAB1_1827 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 82700877 Common dnaJ Cytochrome c heme-binding site:DnaJ central domain (CXXCXGXG):Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal... BAB1_2130 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 82700187 Common ccrB camphor resistance protein CrcB BAB1_1389 37 COG3439 COG3439, Uncharacterized conserved protein Function unknown 82700397 Common - hypothetical protein BAB1_1609 27 None None None 82700571 Common - Bacterial inner-membrane translocator BAB1_1799 151 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 82700683 Common - hypothetical protein BAB1_1917 45 COG3735 COG3735, Uncharacterized protein conserved in bacteria Function unknown 82699858 Pathogen - hypothetical protein BAB1_1026 2 None None None 82699291 Common engA GTP-binding protein EngA BAB1_0405 234 COG1160 COG1160, Predicted GTPases General function prediction only 82700716 Common - Binding-protein-dependent transport systems inner membrane component BAB1_1956 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 82700036 Common recA recombinase A BAB1_1224 244 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 82700778 Common - Von Willebrand factor, type A:Cobalt chelatase, pCobT subunit BAB1_2022 41 COG4547 CobT, Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) Coenzyme metabolism 82699560 Common - NUDIX hydrolase BAB1_0692 117 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 82699057 Common - Nitrogen-fixing NifU, C-terminal BAB1_0139 97 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 82700925 Common - Esterase/lipase/thioesterase, active site:Lipase:Prolyl aminopeptidase S33:Alpha/beta hydrolase BAB1_2179 168 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 82699343 Common xseB exodeoxyribonuclease VII small subunit BAB1_0457 124 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 82700293 Common dnaG DNA primase BAB1_1499 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 82699551 Common era GTP-binding protein Era BAB1_0683 232 COG1159 Era, GTPase General function prediction only 82700207 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase BAB1_1409 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 82700296 Common - carbamoyl phosphate synthase small subunit BAB1_1502 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 82700576 Common - Bacterial regulatory protein, MarR family BAB1_1804 105 COG1846 MarR, Transcriptional regulators Transcription 82700045 Common rpsM 30S ribosomal protein S13 BAB1_1233 240 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 82700408 Common - Glycosyl transferase, family 25 BAB1_1620 30 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 82700815 Common gidB glucose-inhibited division protein B BAB1_2061 172 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 82699424 Common - DegT/DnrJ/EryC1/StrS aminotransferase BAB1_0544 194 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 82700522 Pathogen - hypothetical protein BAB1_1746 2 None None None 82699322 Common - Plasmid stabilization system BAB1_0436 3 COG3668 ParE, Plasmid stabilization system protein General function prediction only 82700163 Common - Periplasmic binding protein/LacI transcriptional regulator BAB1_1362 59 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 82699684 Common - Respiratory-chain NADH dehydrogenase, 51 kDa subunit BAB1_0827 166 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 82699585 Common moaE Molybdopterin biosynthesis MoaE BAB1_0717 153 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 82699951 Common clpP ATP-dependent Clp protease proteolytic subunit BAB1_1132 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 82699733 Common - Haloacid dehalogenase/epoxide hydrolase:Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IIB:HAD-sup... BAB1_0880 118 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 82700615 Common - PDZ/DHR/GLGF domain:Tail specific protease:Carboxyl-terminal protease BAB1_1845 183 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 82700664 Common amt Ammonium transporter BAB1_1896 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 82699256 Common nspC Orn/DAP/Arg decarboxylase, family 2:Carboxynorspermidine decarboxylase BAB1_0363 51 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 82700488 Common tolQ MotA/TolQ/ExbB proton channel BAB1_1712 133 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 82699490 Common - hypothetical protein BAB1_0618 13 None None None 82698943 Pathogen - hypothetical protein BAB1_0011 1 None None None 82699050 Common - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_0132 77 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82699754 Common tatC Sec-independent periplasmic protein translocase BAB1_0903 204 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 82699958 Common ntrC CbxX/CfqX superfamily:Response regulator receiver:Sigma-54 factor interaction domain:Helix-turn-helix, Fis-type:AAA ATPase BAB1_1140 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 82699580 Common - hypothetical protein BAB1_0712 3 None None None 82699890 Common - Beta-lactamase BAB1_1061 69 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 82699994 Pathogen - hypothetical protein BAB1_1177 1 None None None 82700923 Common - Bacterial SH3-like region BAB1_2177 40 COG3807 COG3807, Uncharacterized protein conserved in bacteria Function unknown 82700835 Common hslV ATP-dependent protease peptidase subunit BAB1_2081 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 82699179 Common - hypothetical protein BAB1_0279 25 None None None 82699407 Pathogen - hypothetical protein BAB1_0527 2 None None None 82699499 Common - TPR repeat BAB1_0631 36 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 82700473 Common - ATP/GTP-binding site motif A (P-loop):Amino acid-binding ACT:D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain:... BAB1_1697 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 82699413 Common - ribonuclease III BAB1_0533 24 None None None 82699766 Common - hypothetical protein BAB1_0915 8 COG4872 COG4872, Predicted membrane protein Function unknown 82700004 Common - Glycerophosphoryl diester phosphodiesterase BAB1_1188 81 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 82699374 Common - hypothetical protein BAB1_0488 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 82700507 Common - BioY protein BAB1_1731 105 COG1268 BioY, Uncharacterized conserved protein General function prediction only 82699871 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1039 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 82700818 Common - Protein of unknown function DUF255 BAB1_2064 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 82700859 Common folC Folylpolyglutamate synthetase BAB1_2108 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 82700769 Pathogen - hypothetical protein BAB1_2011 1 None None None 82700554 Common - DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase BAB1_1781 65 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 82699964 Common lipA lipoyl synthase BAB1_1147 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 82700853 Common - ATP/GTP-binding protein BAB1_2102 188 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 82700909 Common nusA transcription elongation factor NusA BAB1_2163 219 COG0195 NusA, Transcription elongation factor Transcription 82699198 Common ureE urease accessory protein UreE BAB1_0301 62 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 82699529 Common - hypothetical protein BAB1_0661 11 None None None 82700317 Common - Protein of unknown function DUF6 BAB1_1525 115 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 82699353 Common - Peptidoglycan-binding LysM BAB1_0467 42 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 82700656 Common gcp O-sialoglycoprotein endopeptidase BAB1_1888 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 82699261 Common - Gliadin, alpha/beta:ATP-binding region, ATPase-like:Bacterial sensor protein, C-terminal:Histidine kinase BAB1_0369 163 COG4564 COG4564, Signal transduction histidine kinase Signal transduction mechanisms 82699607 Common - ETC complex I subunit conserved region BAB1_0739 37 None None None 82700410 Pathogen - hypothetical protein BAB1_1622 1 None None None 82700212 Common - hypothetical protein BAB1_1414 3 COG3242 COG3242, Uncharacterized protein conserved in bacteria Function unknown 82698939 Common - Binding-protein-dependent transport systems inner membrane component BAB1_0007 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 82700645 Common ubiG 3-demethylubiquinone-9 3-methyltransferase BAB1_1875 146 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 82699880 Common - Dihydroneopterin aldolase family:Dihydroneopterin aldolase BAB1_1050 75 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 82699625 Pathogen - hypothetical protein BAB1_0764 1 None None None 82699839 Pathogen - hypothetical protein BAB1_1007 1 None None None 82699749 Common - Glycoside hydrolase, family 3, N-terminal BAB1_0898 168 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 82700428 Pathogen - hypothetical protein BAB1_1651 1 None None None 82700206 Common ilvB acetolactate synthase 3 catalytic subunit BAB1_1408 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 82699233 Common - Allergen V5/Tpx-1 related BAB1_0339 57 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 82699667 Common argC N-acetyl-gamma-glutamyl-phosphate reductase BAB1_0808 209 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 82700481 Common - TPR repeat:Molluscan rhodopsin C-terminal tail BAB1_1705 91 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 82700900 Common - hypothetical protein BAB1_2154 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 82700196 Pathogen - hypothetical protein BAB1_1398 1 None None None 82700322 Common uvrB excinuclease ABC subunit B BAB1_1530 227 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 82700134 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase BAB1_1328 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 82699691 Common nuoM NADH dehydrogenase subunit M BAB1_0834 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 82700126 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase:Uroporphiryn-III C-methyltransferase:Pecorrin-4 C11-meth... BAB1_1320 199 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 82700412 Common - Binding-protein-dependent transport systems inner membrane component BAB1_1624 197 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 82699938 Common coaD phosphopantetheine adenylyltransferase BAB1_1119 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 82700582 Common atpH F0F1 ATP synthase subunit delta BAB1_1810 170 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 82700771 Common - Protein of unknown function DUF165 BAB1_2015 57 COG1738 COG1738, Uncharacterized conserved protein Function unknown 82700751 Common - Family of unknown function YGGT BAB1_1992 33 COG0762 COG0762, Predicted integral membrane protein Function unknown 82699985 Common - ComEC/Rec2-related protein BAB1_1168 72 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 82699655 Common - hypothetical protein BAB1_0796 28 None None None 82700702 Pathogen - hypothetical protein BAB1_1939 2 None None None 82700557 Common - Domain of unknown function DUF336 BAB1_1784 25 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 82700097 Pathogen - hypothetical protein BAB1_1285 1 None None None 82699848 Common - Beta-lactamase-like BAB1_1016 80 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 82699135 Common - ATP/GTP-binding site motif A (P-loop):TrkA potassium uptake protein:Glu/Leu/Phe/Val dehydrogenase:Glu/Leu/Phe/Val dehydrogena... BAB1_0228 179 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 82699862 Common - glutathione reductase BAB1_1030 247 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 82699698 Pathogen - hypothetical protein BAB1_0841 1 None None None 82699660 Common sugE Small multidrug resistance protein BAB1_0801 127 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 82700090 Common - hypothetical protein BAB1_1278 31 COG3672 COG3672, Predicted periplasmic protein Function unknown 82699623 Common - cystathionine beta-lyase BAB1_0760 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 82699404 Common - glyoxalase family protein BAB1_0524 30 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 82699201 Common - Rice seed allergenic protein RAG:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal... BAB1_0304 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82699669 Common rpsI 30S ribosomal protein S9 BAB1_0810 248 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 82700841 Common hisE phosphoribosyl-ATP pyrophosphatase BAB1_2087 174 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 82699618 Common - Beta and gamma crystallin BAB1_0752 11 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 82699547 Common acpS 4'-phosphopantetheinyl transferase BAB1_0679 161 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 82699915 Common thrS threonyl-tRNA synthetase BAB1_1093 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700697 Common dapF diaminopimelate epimerase BAB1_1932 184 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 82699903 Common - Alanyl-transfer RNA synthetase BAB1_1074 213 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 82700516 Common tkt transketolase BAB1_1740 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 82698985 Common frcK putative fructose transport system kinase BAB1_0059 79 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 82700144 Common - hypothetical protein BAB1_1341 6 None None None 82699782 Common - Cell wall hydrolase/autolysin BAB1_0931 180 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 82699436 Common - ISBm1, transposase orfA BAB1_0557 70 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699707 Common - Inositol phosphatase/fructose-1,6-bisphosphatase:Inositol monophosphatase BAB1_0853 178 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 82699364 Common - hypothetical protein BAB1_0478 12 None None None 82699398 Common - Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IA, variant 3 BAB1_0517 51 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 82700385 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1595 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 82700733 Common - 6-pyruvoyl tetrahydropterin synthase and hypothetical protein BAB1_1974 119 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 82699837 Pathogen - hypothetical protein BAB1_1003 1 None None None 82700139 Common - 3-hydroxyisobutyrate dehydrogenase:6-phosphogluconate dehydrogenase, NAD binding domain:6-phosphogluconate dehydrogenase BAB1_1334 163 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 82699280 Common ccoN Cytochrome c oxidase, subunit I:Cytochrome c oxidase cbb3-type, subunit I BAB1_0392 137 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 82699144 Common - Binding-protein-dependent transport systems inner membrane component BAB1_0240 183 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 82699511 Common - General substrate transporter:Major facilitator superfamily (MFS) BAB1_0643 73 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 82699382 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BAB1_0501 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 82699801 Common - hypothetical protein BAB1_0950 181 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 82699576 Common - Predicted permease YjgP/YjgQ family BAB1_0708 58 COG0795 COG0795, Predicted permeases General function prediction only 82700364 Common - Protein of unknown function DUF58 BAB1_1574 68 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 82700230 Common - UvrD/REP helicase:ATP/GTP-binding site motif A (P-loop) BAB1_1432 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 82699103 Pathogen - hypothetical protein BAB1_0189 1 None None None 82700336 Common lgt prolipoprotein diacylglyceryl transferase BAB1_1544 206 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 82700491 Common ruvA Holliday junction DNA helicase motor protein BAB1_1715 209 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 82700245 Common ddl D-alanine--D-alanine ligase BAB1_1447 211 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 82700335 Common - Protein of unknown function DUF526 BAB1_1543 30 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 82699973 Common - 2-dehydro-3-deoxyphosphooctonate aldolase BAB1_1156 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 82700848 Common - PTS system fructose subfamily IIA component BAB1_2096 95 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 82699295 Pathogen - hypothetical protein BAB1_0409 1 None None None 82699038 Common - outer membrane protein, putative BAB1_0116 29 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 82699334 Common - Phosphoglycerate/bisphosphoglycerate mutase BAB1_0448 140 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 82700497 Pathogen - hypothetical protein BAB1_1721 1 None None None 82700116 Common - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase:Cobalamin (vitamin B12) biosynthesis CbiG protein:Precor... BAB1_1307 117 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 82699159 Common - virulence-associated protein E BAB1_0255 29 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 82700027 Pathogen - hypothetical protein BAB1_1215 1 None None None 82700431 Common - Bacterial regulatory proteins, IclR family BAB1_1654 101 COG1414 IclR, Transcriptional regulator Transcription 82699911 Common mazG nucleoside triphosphate pyrophosphohydrolase BAB1_1089 155 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 162002878 Common - Flagellar protein FlgJ:Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase BAB1_0260 66 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 82700549 Pathogen - hypothetical protein BAB1_1776 1 None None None 82700016 Pathogen - hypothetical protein BAB1_1202 2 None None None 82699907 Common - SAM (and some other nucleotide) binding motif:TPR repeat BAB1_1085 53 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 82699455 Common - Prokaryotic transcription elongation factor GreA/GreB BAB1_0580 115 COG0782 GreA, Transcription elongation factor Transcription 82700803 Common - Oxidoreductase, N-terminal:Oxidoreductase, C-terminal BAB1_2049 185 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 82699595 Common - Protein of unknown function DUF6 BAB1_0727 50 COG2510 COG2510, Predicted membrane protein Function unknown 82699390 Common - Insulinase-like peptidase, family M16:Peptidase M16 inactive BAB1_0509 201 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 82699519 Pathogen - hypothetical protein BAB1_0651 1 None None None 82699877 Common - Cytochrome c heme-binding site:Ferredoxin:Adrenodoxin BAB1_1045 77 COG0633 Fdx, Ferredoxin Energy production and conversion 82699359 Common - Colicin V production protein BAB1_0473 47 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 82699734 Common - Solute-binding protein/glutamate receptor:Ionotropic glutamate receptor:Bacterial extracellular solute-binding protein, family 3 BAB1_0881 180 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 82700024 Common bhbA methylmalonyl-CoA mutase BAB1_1212 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 82698976 Pathogen - hypothetical protein BAB1_0050 1 None None None 82700862 Pathogen - hypothetical protein BAB1_2111 2 None None None 82699813 Common - hypothetical protein BAB1_0964 17 COG3827 COG3827, Uncharacterized protein conserved in bacteria Function unknown 82699305 Pathogen - hypothetical protein BAB1_0419 1 None None None 82699921 Common - Patatin BAB1_1099 124 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 82700053 Common rpsH 30S ribosomal protein S8 BAB1_1241 245 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 82699095 Common cysI Nitrite/sulfite reductase ferredoxin-like half domain:Nitrite and sulfite reductase iron-sulfur/siroheme-binding site:Nitrite... BAB1_0181 166 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 82699553 Common - Tyrosine specific protein phosphatase and dual specificity protein phosphatase BAB1_0685 15 COG5350 COG5350, Predicted protein tyrosine phosphatase General function prediction only 82700224 Common - hypothetical protein BAB1_1426 25 COG4321 COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis General function prediction only 82699645 Pathogen - hypothetical protein BAB1_0786 1 None None None 82699941 Common - Multiple antibiotic resistance (MarC)-related proteins BAB1_1122 159 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 82699493 Common - NLP/P60 BAB1_0623 35 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 82699508 Common - PAS domain:PAC motif:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Hist... BAB1_0640 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82700353 Common - ABC transporter, transmembrane region:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1561 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 82698947 Common - enoyl-CoA hydratase BAB1_0016 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 82699293 Pathogen - hypothetical protein BAB1_0407 1 None None None 82699410 Common - BioY protein BAB1_0530 95 COG1268 BioY, Uncharacterized conserved protein General function prediction only 82699501 Common - Cytochrome c assembly protein:Cytochrome c-type biogenesis protein:Cytochrome c-type biogenesis protein CcmF BAB1_0633 138 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 82699307 Pathogen - hypothetical protein BAB1_0421 1 None None None 82700590 Common - usg protein, putative BAB1_1818 24 COG5425 COG5425, Usg protein, probable subunit of phosphoribosylanthranilate isomerase Amino acid transport and metabolism 82699345 Common - Transglycosylase-associated protein BAB1_0459 14 COG2261 COG2261, Predicted membrane protein Function unknown 82700457 Common - Biopolymer transport protein ExbD/TolR BAB1_1680 128 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 82700443 Common - Prenyl group binding site (CAAX box):RNA-binding S4:Pseudouridine synthase:Pseudouridine synthase, Rlu:Pseudouridine synthase... BAB1_1666 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 82698955 Common - Conserved hypothetical protein 698 BAB1_0026 115 COG2855 COG2855, Predicted membrane protein Function unknown 82700781 Common - Heat shock protein DnaJ, N-terminal:Heat shock protein DnaJ BAB1_2025 85 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 82700455 Pathogen - hypothetical protein BAB1_1678 2 None None None 82700744 Common - hypothetical protein BAB1_1985 28 None None None 82699470 Common - amidase BAB1_0598 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 82700873 Common pheS phenylalanyl-tRNA synthetase subunit alpha BAB1_2126 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 82699928 Common - Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain:Acyl-CoA dehydrogenase, N-te... BAB1_1109 159 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 82699167 Pathogen - hypothetical protein BAB1_0267 2 None None None 82700706 Pathogen - hypothetical protein BAB1_1943 1 None None None 82699780 Common - 1-aminocyclopropane-1-carboxylate synthase:Aminotransferase, class I and II BAB1_0929 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 82699115 Common - Helix-turn-helix, Fis-type BAB1_0201 73 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 82699484 Common - Phage prohead protease HK97 BAB1_0612 45 COG3740 COG3740, Phage head maturation protease General function prediction only 82698962 Common - NUDIX hydrolase BAB1_0033 105 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 82699849 Common - Uridine kinase:ABC transporter, transmembrane region:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Glucan ... BAB1_1017 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 82700314 Common lpcC Glycosyl transferase, group 1 BAB1_1522 207 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 82700589 Common - fusaric acid resistance protein FusB / fusaric acid resistance protein FusC BAB1_1817 17 COG1289 COG1289, Predicted membrane protein Function unknown 82700465 Common - hypothetical protein BAB1_1689 8 None None None 82700151 Common - hypothetical protein BAB1_1348 36 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 82699102 Common metH B12-dependent methionine synthase BAB1_0188 175 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 82699030 Common - cyclic beta 1-2 glucan synthetase BAB1_0108 48 COG3459 COG3459, Cellobiose phosphorylase Carbohydrate transport and metabolism 82700907 Common trmB tRNA (guanine-N(7))-methyltransferase BAB1_2161 165 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 82699931 Common - Acriflavin resistance protein BAB1_1112 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 82699480 Pathogen - hypothetical protein BAB1_0608 1 None None None 82699479 Common - Glycosyl transferase, family 51:Penicillin-binding protein, transpeptidase domain BAB1_0607 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 82699247 Pathogen - hypothetical protein BAB1_0353 2 None None None 82699443 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0565 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 82700136 Common - cobyric acid synthase BAB1_1331 154 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 82700426 Common rbsC-2 Bacterial inner-membrane translocator:Voltage-dependent potassium channel BAB1_1649 168 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 82698998 Common - Lysine exporter protein (LYSE/YGGA) BAB1_0072 117 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 82699855 Common glnA Glutamine synthetase class-I, adenylation site:Glutamine synthetase type I:Glutamine synthetase, catalytic domain:Glutamine s... BAB1_1023 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 82699621 Pathogen - hypothetical protein BAB1_0758 2 None None None 82700406 Pathogen - hypothetical protein BAB1_1618 1 None None None 82700279 Common - Protein of unknown function DUF475 BAB1_1485 41 COG2899 COG2899, Uncharacterized protein conserved in bacteria Function unknown 82699976 Common - ErfK/YbiS/YcfS/YnhG BAB1_1159 84 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 82698938 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0006 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 82700318 Common - Protein of unknown function DUF486 BAB1_1526 53 COG3169 COG3169, Uncharacterized protein conserved in bacteria Function unknown 82700752 Common ppa inorganic pyrophosphatase BAB1_1993 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 82700378 Common - Bacterial regulatory protein, MarR family BAB1_1588 26 COG1846 MarR, Transcriptional regulators Transcription 82700260 Common - Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine amidase, family 2 BAB1_1462 112 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 82699910 Common galE-1 NAD binding site:NAD-dependent epimerase/dehydratase:UDP-glucose 4-epimerase BAB1_1088 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 82699391 Common - threonine synthase BAB1_0510 179 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 82700801 Common - Aldehyde dehydrogenase BAB1_2045 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 82699879 Common - Dihydropteroate synthase, DHPS:Dihydropteroate synthase BAB1_1049 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 82700007 Common clpA Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region:Clp, N terminal BAB1_1191 230 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 82700763 Common - AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family BAB1_2004 193 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 82700482 Pathogen - hypothetical protein BAB1_1706 1 None None None 82700643 Common ptsP PEP-utilizing enzyme:Beta tubulin:GAF domain:Phosphoenolpyruvate-protein phosphotransferase BAB1_1873 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 82700890 Common pstB ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_2144 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 82699196 Common ureB urease subunit beta BAB1_0299 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 82699507 Common - Glycosyl transferase, family 25:O-antigen polymerase BAB1_0639 22 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 82699042 Common - DNA polymerase I BAB1_0120 217 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 82699583 Common ndk nucleoside diphosphate kinase BAB1_0715 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 82700569 Common - ATP/GTP-binding site motif A (P-loop):Mitochondrial substrate carrier:ABC transporter:AAA ATPase BAB1_1796 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 82699453 Common - transcriptional regulator BetI BAB1_0578 58 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 82699604 Common - Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_0736 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699731 Common - hypothetical protein BAB1_0878 27 None None None 82700757 Pathogen - hypothetical protein BAB1_1998 1 None None None 82698949 Common - Biotin/lipoyl attachment:Biotin-requiring enzyme, attachment site:Carbamoyl-phosphate synthase L chain, ATP-binding:Carbamoyl... BAB1_0018 234 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 82700000 Common tsf elongation factor Ts BAB1_1183 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 82700556 Common phbA-1 acetyl-CoA acetyltransferase BAB1_1783 170 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 82699577 Common - Predicted permease YjgP/YjgQ family BAB1_0709 105 COG0795 COG0795, Predicted permeases General function prediction only 82699635 Common - hypothetical protein BAB1_0776 6 None None None 82699724 Common - lipid A biosynthesis lauroyl acyltransferase BAB1_0870 101 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 82699427 Common - transposase BAB1_0547 35 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699118 Pathogen - hypothetical protein BAB1_0210 1 None None None 82699434 Common - IS5 family element, transposase orfA BAB1_0554 72 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82700387 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1597 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 82700176 Common ureB urease subunit beta BAB1_1377 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 82699630 Common - hypothetical protein BAB1_0771 15 COG4391 COG4391, Uncharacterized protein conserved in bacteria Function unknown 82700219 Pathogen - hypothetical protein BAB1_1421 1 None None None 82700035 Common alaS alanyl-tRNA synthetase BAB1_1223 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82699273 Common ccoS Cytochrome oxidase maturation protein cbb3-type BAB1_0385 3 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 162002873 Common pyrH uridylate kinase BAB1_1182 226 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 82700235 Common - Metallopeptidase family M24 BAB1_1437 236 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 82699744 Common - Protein of unknown function DUF533 BAB1_0893 31 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 82700152 Common cysW-2 Binding-protein-dependent transport systems inner membrane component BAB1_1349 215 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 82699461 Common - ErfK/YbiS/YcfS/YnhG:Twin-arginine translocation pathway signal BAB1_0589 69 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 82700390 Common - periplasmic dipeptide transport protein precursor BAB1_1600 109 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 82700666 Common - 2-octaprenyl-6-methoxyphenyl hydroxylase BAB1_1898 132 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 82699824 Pathogen - hypothetical protein BAB1_0982 1 None None None 82699649 Common - riboflavin synthase subunit alpha BAB1_0790 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 82700681 Common rimM 16S rRNA-processing protein BAB1_1915 167 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 82699006 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Sugar transporter superfamily BAB1_0082 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 82699982 Common moaC molybdenum cofactor biosynthesis protein C BAB1_1165 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 82699540 Common - Amino acid-binding ACT:Metal dependent phosphohydrolase, HD region:TGS domain:RelA/SpoT protein:Metal-dependent phosphohydrol... BAB1_0672 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 82700887 Common - hypothetical protein BAB1_2141 130 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 82699997 Common - RNA-binding region RNP-1 (RNA recognition motif):Di-trans-poly-cis-decaprenylcistransferase BAB1_1180 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 82700594 Common sun SAM (and some other nucleotide) binding motif:Bacterial Sun/eukaryotic nucleolar Nop1/Nop2:Antitermination protein NusB:NusB ... BAB1_1822 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 82698935 Common recF recombination protein F BAB1_0003 160 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 82700075 Common rpoC DNA-directed RNA polymerase subunit beta' BAB1_1263 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 82699869 Common - Mandelate racemase/muconate lactonizing enzyme BAB1_1037 121 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 82699235 Common pyrD dihydroorotate dehydrogenase 2 BAB1_0341 224 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 82699761 Common - Vacuolar H+-transporting two-sector ATPase, C subunit:Rhodopsin-like GPCR superfamily:Regulator of chromosome condensation, R... BAB1_0910 216 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 82700424 Common - short chain dehydrogenase BAB1_1647 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82700927 Common - Bacterial regulatory protein, MarR family BAB1_2181 18 COG1846 MarR, Transcriptional regulators Transcription 82699956 Common - CbxX/CfqX superfamily:Chaperonin clpA/B:Response regulator receiver:Sigma-54 factor interaction domain:Helix-turn-helix, Fis-... BAB1_1138 223 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 82698961 Common - hit1 protein BAB1_0032 52 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 82699752 Common tatA twin argininte translocase protein A BAB1_0901 107 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 82700159 Common fucU RbsD or FucU transport BAB1_1356 44 COG4154 FucU, Fucose dissimilation pathway protein FucU Carbohydrate transport and metabolism 82700613 Pathogen - Transglycosylase-associated protein BAB1_1843 2 COG2261 COG2261, Predicted membrane protein Function unknown 82699182 Common infA translation initiation factor IF-1 BAB1_0282 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 82700714 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_1953 177 COG0583 LysR, Transcriptional regulator Transcription 82700254 Common - Beta-lactamase, class A:Penicillin-binding protein, transpeptidase domain:ATP/GTP-binding site motif A (P-loop):Penicillin-bi... BAB1_1456 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 82699885 Common - hypothetical protein BAB1_1055 66 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 82699189 Pathogen - hypothetical protein BAB1_0291 1 None None None 82699052 Common - Transposase, IS4 BAB1_0134 55 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699682 Common - NADH dehydrogenase subunit D BAB1_0825 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 82699420 Common - Formyl transferase, N-terminal BAB1_0540 222 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 82699714 Common - phosphoribosylformylglycinamidine synthase subunit I BAB1_0860 231 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 82700686 Common - Lysine exporter protein (LYSE/YGGA) BAB1_1920 111 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 82700671 Common sdhC Succinate dehydrogenase, cytochrome b subunit BAB1_1903 86 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 82699899 Common - TrpR binding protein WrbA BAB1_1070 97 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 82700064 Common rplB 50S ribosomal protein L2 BAB1_1252 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 82700371 Common - Metallo-phosphoesterase BAB1_1581 43 COG1409 Icc, Predicted phosphohydrolases General function prediction only 82699948 Common - Histone-like bacterial DNA-binding protein BAB1_1129 213 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 82699818 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A BAB1_0972 71 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 82700722 Common - Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family BAB1_1962 129 COG1802 GntR, Transcriptional regulators Transcription 82699830 Common - hypothetical protein BAB1_0993 28 COG3514 COG3514, Uncharacterized protein conserved in bacteria Function unknown 82700048 Common rplO 50S ribosomal protein L15 BAB1_1236 211 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 82700561 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase BAB1_1788 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 82699174 Pathogen - hypothetical protein BAB1_0274 1 None None None 82700041 Common - Serine protease, V8 family:Serine protease, trypsin family:PDZ/DHR/GLGF domain:HtrA/DegQ protease BAB1_1229 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 82699772 Pathogen - hypothetical protein BAB1_0921 1 None None None 82699315 Common - Polyprenyl synthetase BAB1_0429 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 82700369 Common - OmpW family BAB1_1579 72 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 82700688 Common sucB dihydrolipoamide acetyltransferase BAB1_1922 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 82700729 Common - 3-hydroxybutyryl-CoA dehydrogenase BAB1_1970 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 82699768 Common tig trigger factor BAB1_0917 214 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 82700271 Common - SAM (and some other nucleotide) binding motif BAB1_1473 79 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 82700506 Common - Bacterial regulatory protein, GntR family BAB1_1730 133 COG1802 GntR, Transcriptional regulators Transcription 82699929 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_1110 174 COG0583 LysR, Transcriptional regulator Transcription 82700082 Common secE preprotein translocase subunit SecE BAB1_1270 31 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 82699481 Common - ATP/GTP-binding site motif A (P-loop) BAB1_0609 25 COG5323 COG5323, Uncharacterized conserved protein Function unknown 82699886 Common dksA Zn-finger, prokaryotic DksA/TraR C4 type BAB1_1056 160 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 82700089 Common - hypothetical protein BAB1_1277 13 COG5388 COG5388, Uncharacterized protein conserved in bacteria Function unknown 82699485 Common - Phage major capsid protein, HK97 family BAB1_0613 49 COG4653 COG4653, Predicted phage phi-C31 gp36 major capsid-like protein General function prediction only 82699146 Common - Mandelate racemase/muconate lactonizing enzyme BAB1_0242 131 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 82700475 Common serC phosphoserine aminotransferase BAB1_1699 69 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 82700797 Common - ATP/GTP-binding site motif A (P-loop) BAB1_2041 4 None None None 82700411 Common - AsmA BAB1_1623 25 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 82699966 Common - dihydrolipoamide dehydrogenase BAB1_1149 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 82700107 Pathogen - hypothetical protein BAB1_1298 1 None None None 82700546 Common - Peptidase family M48:Neutral zinc metallopeptidase, zinc-binding region BAB1_1773 131 COG4784 COG4784, Putative Zn-dependent protease General function prediction only 82700480 Common - hypothetical protein BAB1_1704 121 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 82700538 Pathogen - hypothetical protein BAB1_1764 1 None None None 82698959 Common - hypothetical protein BAB1_0030 134 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 82699040 Common - hypothetical protein BAB1_0118 172 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 82700158 Common - Calcium-binding EF-hand BAB1_1355 8 None None None 82699448 Common xylB Carbohydrate kinase, FGGY:Xylulokinase BAB1_0571 184 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 82699476 Common - hypothetical protein BAB1_0604 6 COG5330 COG5330, Uncharacterized protein conserved in bacteria Function unknown 82699832 Pathogen - IS711, transposase orfA BAB1_0996 1 None None None 82700204 Common - ATP/GTP-binding site motif A (P-loop) BAB1_1406 108 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 82700445 Common - Ferric-uptake regulator BAB1_1668 190 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 82699136 Pathogen - hypothetical protein BAB1_0229 1 None None None 82699220 Common - Glycosyl transferase, family 2 BAB1_0326 132 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 82699061 Common - PII uridylyl-transferase BAB1_0143 125 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 82699227 Common hslO Hsp33-like chaperonin BAB1_0333 132 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 82700563 Common - membrane protein MosC BAB1_1790 72 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 82699366 Common rpsF 30S ribosomal protein S6 BAB1_0480 202 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 82698953 Common cmk cytidylate kinase BAB1_0024 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 82700359 Common - GCN5-related N-acetyltransferase BAB1_1567 91 COG3153 COG3153, Predicted acetyltransferase General function prediction only 82700634 Common - hypothetical protein BAB1_1864 16 None None None 82700463 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase BAB1_1687 183 COG0756 Dut, dUTPase Nucleotide transport and metabolism 82700704 Common - GCN5-related N-acetyltransferase BAB1_1941 25 COG0456 RimI, Acetyltransferases General function prediction only 82699211 Common - arginine/ornithine transport operon protein aot BAB1_0317 25 COG3608 COG3608, Predicted deacylase General function prediction only 82699012 Common - aconitate hydratase BAB1_0090 223 COG1048 AcnA, Aconitase A Energy production and conversion 82700283 Common - hypothetical protein BAB1_1489 19 None None None 82700306 Common aspC aspartate aminotransferase BAB1_1514 237 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 82700181 Common - Urea transporter BAB1_1383 18 COG4413 Utp, Urea transporter Amino acid transport and metabolism 82700324 Common - Cold-shock DNA-binding domain BAB1_1532 176 COG1278 CspC, Cold shock proteins Transcription 82699736 Common - Eukaryotic/viral aspartic protease, active site BAB1_0883 53 COG3577 COG3577, Predicted aspartyl protease General function prediction only 82699193 Pathogen - hypothetical protein BAB1_0296 1 None None None 82699995 Common - Mammalian sterol-regulatory element binding protein (SREBP) site 2 protease:PDZ/DHR/GLGF domain:Zinc metalloprotease (putativ... BAB1_1178 211 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 82699093 Common cysG Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase:Pyrokinin:Uroporphiryn-III C-methyltransferase:Uroporphy... BAB1_0179 204 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 82699739 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase BAB1_0886 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 82700264 Common - Putative peptidoglycan binding domain 1 BAB1_1466 100 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 82700693 Pathogen - hypothetical protein BAB1_1928 1 None None None 82699092 Common - hypothetical protein BAB1_0178 118 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 82700037 Pathogen - hypothetical protein BAB1_1225 1 None None None 82700458 Common - ATP/GTP-binding site motif A (P-loop):Proline-rich extensin:Gram-negative bacterial tonB protein:TonB, C-terminal BAB1_1681 7 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 82699208 Common - putative oxidoreductase BAB1_0314 227 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 82699867 Pathogen - Proline-rich extensin BAB1_1035 2 None None None 82699421 Common - perosamine synthetase WbkB BAB1_0541 4 None None None 82699774 Common aat leucyl/phenylalanyl-tRNA--protein transferase BAB1_0923 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 82700102 Common - homoserine dehydrogenase BAB1_1293 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 82698964 Common - 3-deoxy-manno-octulosonate cytidylyltransferase BAB1_0035 147 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 82699811 Common - SAM (and some other nucleotide) binding motif:Protein-L-isoaspartate(D-aspartate) O-methyltransferase:Site-specific DNA-methy... BAB1_0962 160 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 82699659 Common - Bacterial regulatory protein, MerR family BAB1_0800 92 COG0789 SoxR, Predicted transcriptional regulators Transcription 82700678 Common - hypothetical protein BAB1_1912 17 None None None 82699792 Common bcp Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen BAB1_0941 217 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 82699846 Common metG methionyl-tRNA synthetase BAB1_1014 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82699297 Common - F0F1 ATP synthase subunit A BAB1_0411 74 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 82699310 Common - hypothetical protein BAB1_0424 6 None None None 82699084 Common - Ribokinase:Carbohydrate kinase, PfkB BAB1_0168 203 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 82699533 Pathogen - hypothetical protein BAB1_0665 1 None None None 82699828 Common - hypothetical protein BAB1_0991 10 COG3422 COG3422, Uncharacterized conserved protein Function unknown 82699927 Common - BRO family, N-terminal BAB1_1106 40 COG3617 COG3617, Prophage antirepressor Transcription 82700419 Common - Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_1635 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699933 Common - Bacterial regulatory protein TetR, HTH motif BAB1_1114 43 COG1309 AcrR, Transcriptional regulator Transcription 82699073 Common rpoN RNA polymerase factor sigma-54 BAB1_0157 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 82700885 Pathogen - hypothetical protein BAB1_2139 1 None None None 82699309 Common ispE Cell division protein FtsZ:TonB-dependent receptor protein:Homoserine kinase:4-diphosphocytidyl-2C-methyl-D-erythritol kinase... BAB1_0423 178 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 82699252 Common panC pantoate--beta-alanine ligase BAB1_0359 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 82700829 Common - Calcium-binding EF-hand BAB1_2075 45 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 82699019 Pathogen - hypothetical protein BAB1_0097 1 None None None 82700161 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1358 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 82700014 Common - hypothetical protein BAB1_1200 27 COG3503 COG3503, Predicted membrane protein Function unknown 82700868 Common infC translation initiation factor IF-3 BAB1_2121 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 82700750 Common - ChaC-like protein BAB1_1991 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 82699701 Common lolD ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0844 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 82700437 Pathogen - hypothetical protein BAB1_1660 1 None None None 82700316 Common - hypothetical protein BAB1_1524 12 None None None 82699693 Common - Biotin protein ligase, C-terminal:Biotin/lipoate A/B protein ligase domain:Biotin--acetyl-CoA-carboxylase ligase BAB1_0836 221 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 82699741 Pathogen - hypothetical protein BAB1_0890 1 None None None 82700746 Common - Generic methyltransferase BAB1_1987 63 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 82700695 Common omp19 lipoprotein Omp19 BAB1_1930 8 None None None 82699554 Common - hypothetical protein BAB1_0686 31 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 82700842 Common coaA pantothenate kinase BAB1_2088 78 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 82700021 Common - Helix-turn-helix motif BAB1_1209 49 COG3800 COG3800, Predicted transcriptional regulator General function prediction only 82700875 Common - Oxidoreductase, N-terminal:Oxidoreductase, C-terminal BAB1_2128 160 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 82699165 Common - hypothetical protein BAB1_0265 2 None None None 82699836 Common - secretion activator protein, putative BAB1_1002 21 COG3926 zliS, Putative secretion activating protein General function prediction only 82700341 Common - ribose-phosphate pyrophosphokinase BAB1_1549 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 82699657 Common - 3-oxoacyl-(acyl carrier protein) synthase III BAB1_0798 220 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 82700334 Common - hypothetical protein BAB1_1542 34 COG5465 COG5465, Uncharacterized conserved protein Function unknown 82700234 Common prmA ribosomal protein L11 methyltransferase BAB1_1436 156 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 82699663 Common - Polysaccharide export protein BAB1_0804 112 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 82700623 Common obgE GTPase ObgE BAB1_1853 249 COG0536 Obg, Predicted GTPase General function prediction only 82699632 Common - Lipocalin-related protein and Bos/Can/Equ allergen:Ppx/GppA phosphatase BAB1_0773 170 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 82699617 Pathogen - hypothetical protein BAB1_0751 1 None None None 82699671 Common - Phenylacetic acid degradation-related protein:Thioesterase superfamily BAB1_0812 36 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 82699571 Common - Peptidase M23/M37 BAB1_0703 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 82699036 Common - Glycosyl transferase, family 51:Penicillin-binding protein, transpeptidase domain:ATP/GTP-binding site motif A (P-loop) BAB1_0114 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 82699352 Common - hypothetical protein BAB1_0466 9 COG3895 COG3895, Predicted periplasmic protein General function prediction only 82699789 Pathogen - hypothetical protein BAB1_0938 1 None None None 82700042 Common rplQ 50S ribosomal protein L17 BAB1_1230 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 82699971 Common - SAM (and some other nucleotide) binding motif:Site-specific DNA-methyltransferase (cytosine-N4-specific) BAB1_1154 41 None None None 82699661 Common - Bacterial sugar transferase BAB1_0802 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 82699154 Common - Phage integrase BAB1_0250 91 COG0582 XerC, Integrase DNA replication, recombination, and repair 82699909 Pathogen - hypothetical protein BAB1_1087 1 None None None 82700366 Common - hypothetical protein BAB1_1576 35 COG5426 COG5426, Uncharacterized membrane protein Function unknown 82700792 Common - ATP/GTP-binding site motif A (P-loop):Cobalamin synthesis protein/P47K BAB1_2036 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 82699023 Common - hypothetical protein BAB1_0101 10 None None None 82699384 Common rnhA ribonuclease H BAB1_0503 180 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 82699049 Common - Protein of unknown function DUF156 BAB1_0129 55 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 82698974 Pathogen - hypothetical protein BAB1_0048 2 None None None 82700339 Common - Metallopeptidase family M24 BAB1_1547 55 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 82700050 Common rpsE 30S ribosomal protein S5 BAB1_1238 247 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 82700198 Common - Bacterial regulatory protein TetR, HTH motif BAB1_1400 23 COG1309 AcrR, Transcriptional regulator Transcription 82699160 Common - hypothetical protein BAB1_0258 4 None None None 82700585 Common - putative translaldolase BAB1_1813 154 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 82699127 Common - Eukaryotic/viral aspartic protease, active site:Ribokinase:Phosphomethylpyrimidine kinase BAB1_0219 217 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 82699244 Common - Polysaccharide deacetylase BAB1_0350 97 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 82699626 Pathogen - amino acid ABC transporter, permease protein KO: K02028 polar amino acid transport system ATP-binding proetin BAB1_0767 2 None None None 82700700 Common ispZ intracellular septation protein A BAB1_1935 92 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 82700059 Common rpmC 50S ribosomal protein L29 BAB1_1247 173 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 82700257 Pathogen - hypothetical protein BAB1_1459 1 None None None 82700834 Common hslU ATP-dependent protease ATP-binding subunit BAB1_2080 209 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 82699414 Common - Polysaccharide biosynthesis protein CapD BAB1_0534 170 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 82698984 Common - Esterase/lipase/thioesterase, active site BAB1_0058 54 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 82699840 Common - Arsenate reductase:Arsenate reductase and related BAB1_1008 105 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 82700301 Pathogen - hypothetical protein BAB1_1509 1 None None None 82700095 Common - Protein of unknown function DUF192 BAB1_1283 87 COG1430 COG1430, Uncharacterized conserved protein Function unknown 82700113 Common - Nitrite/sulfite reductase ferredoxin-like half domain:Nitrite and sulfite reductase iron-sulfur/siroheme-binding site:Nitrite... BAB1_1304 64 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 82700861 Common trpA tryptophan synthase subunit alpha BAB1_2110 217 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 82700466 Common - Glutamine amidotransferase, class-II BAB1_1690 66 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 82699545 Common - Helix-turn-helix, AraC type BAB1_0677 80 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 82700141 Pathogen - hypothetical protein BAB1_1336 2 COG5510 COG5510, Predicted small secreted protein Function unknown 82699053 Common - hypothetical protein BAB1_0135 5 None None None 82699395 Common - Haloacid dehalogenase/epoxide hydrolase:Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IA, variant... BAB1_0514 156 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 82699912 Common - nitrilotriacetate monooxygenase component B BAB1_1090 86 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 82700022 Common - Carboxyl transferase family:Acetyl-CoA carboxylase carboxyl transferase, beta subunit BAB1_1210 216 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 82699269 Common - chaperone XdhC, putative BAB1_0380 40 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 82699712 Common - lipoprotein, putative BAB1_0858 6 None None None 82700826 Common dnaQ DNA polymerase III subunit epsilon BAB1_2072 193 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 82699829 Pathogen - hypothetical protein BAB1_0992 1 None None None 82699978 Common tpiA triosephosphate isomerase BAB1_1161 219 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 82699643 Pathogen - hypothetical protein BAB1_0784 1 None None None 82699226 Common - ornithine carbamoyltransferase BAB1_0332 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 82700611 Common - Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain BAB1_1841 109 COG0583 LysR, Transcriptional regulator Transcription 82700160 Common - short chain dehydrogenase BAB1_1357 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699237 Common - hypothetical protein BAB1_0343 10 None None None 82699452 Common - choline dehydrogenase BAB1_0577 90 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 82699008 Common - hypothetical protein BAB1_0084 142 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 82700180 Common ureD-2 Urease accessory protein UreD BAB1_1382 71 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 82700009 Common - D-alanyl-D-alanine carboxypeptidase 1, S11 family BAB1_1193 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 82699459 Common - hypothetical protein BAB1_0587 11 None None None 82700518 Common pgk phosphoglycerate kinase BAB1_1742 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 82700738 Common - Ribonuclease BN BAB1_1979 67 COG1295 Rbn, Predicted membrane protein Function unknown 82699370 Common acpP acyl carrier protein BAB1_0484 206 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82700080 Common rplK 50S ribosomal protein L11 BAB1_1268 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 82700807 Pathogen - hypothetical protein BAB1_2053 1 None None None 82699612 Common - Helix-turn-helix motif BAB1_0744 46 COG4933 COG4933, Uncharacterized conserved protein Function unknown 82699044 Common gyrB DNA gyrase subunit B BAB1_0122 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 82700892 Common phoB Response regulator receiver:Transcriptional regulatory protein, C terminal BAB1_2146 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82700920 Common fabA 3-hydroxydecanoyl-(acyl carrier protein) dehydratase BAB1_2174 83 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 82699330 Common pdxH pyridoxamine 5'-phosphate oxidase BAB1_0444 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 82700649 Common - competence protein F BAB1_1880 162 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 82700677 Common - Antibiotic biosynthesis monooxygenase BAB1_1911 38 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 82700252 Common - Cytoplasmic peptidoglycan synthetase, N-terminal:Chaperonin Cpn60:Cytoplasmic peptidoglycan synthetase, C-terminal:UDP-N-ac... BAB1_1454 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 82700167 Common - Periplasmic binding protein BAB1_1366 43 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 82699263 Common - Sodium:dicarboxylate symporter:Short-chain dehydrogenase/reductase SDR:Blood group Rhesus C/E and D polypeptide BAB1_0372 122 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 82700388 Common - Binding-protein-dependent transport systems inner membrane component:Sodium:dicarboxylate symporter BAB1_1598 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 82700756 Common ftsE ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_1997 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 82700218 Common - Drug resistance transporter Bcr/CflA subfamily:General substrate transporter:Major facilitator superfamily (MFS) BAB1_1420 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 82699028 Common cysW-1 Binding-protein-dependent transport systems inner membrane component:NADH-plastoquinone oxidoreductase, chain 5 BAB1_0106 193 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 82699320 Common - Sua5/YciO/YrdC/YwlC protein family:SUA5:SUA5/yciO/yrdC, N-terminal BAB1_0434 233 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 82700856 Common - UvrD/REP helicase:ATP/GTP-binding site motif A (P-loop) BAB1_2105 223 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 82700558 Common rpmF 50S ribosomal protein L32 BAB1_1785 121 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 82699504 Common - Response regulator receiver:Transcriptional regulatory protein, C terminal BAB1_0636 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82700903 Common - CBS domain:Transporter associated domain BAB1_2157 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 82699109 Common - Inositol phosphatase/fructose-1,6-bisphosphatase:Inositol monophosphatase:3(2),5-bisphosphate nucleotidase, bacterial BAB1_0195 144 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 82700273 Pathogen - hypothetical protein BAB1_1475 1 None None None 82700447 Pathogen - hypothetical protein BAB1_1670 1 COG5487 COG5487, Small integral membrane protein Function unknown 82699100 Common - hypothetical protein BAB1_0186 4 None None None 82699055 Common - hypothetical protein BAB1_0137 30 COG5321 COG5321, Uncharacterized protein conserved in bacteria Function unknown 82700087 Common - Rhomboid-like protein BAB1_1275 52 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 82700288 Common omp28 immunoreactive 28 kDa outer membrane protein BAB1_1494 88 COG2968 COG2968, Uncharacterized conserved protein Function unknown 82700534 Common - TPR repeat BAB1_1760 51 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 82700905 Common - Helix-turn-helix motif BAB1_2159 40 COG1396 HipB, Predicted transcriptional regulators Transcription 82700800 Common - NAD binding site:MIP family:Pyridine nucleotide-disulphide oxidoreductase, class I:TrkA potassium uptake protein BAB1_2044 89 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 82699230 Common - 2'-deoxycytidine 5'-triphosphate deaminase BAB1_0336 23 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 82699329 Common ubiA prenyltransferase BAB1_0443 178 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 82699680 Common nuoB NADH dehydrogenase subunit B BAB1_0823 191 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 82699477 Common - hypothetical protein BAB1_0605 13 COG5436 COG5436, Predicted integral membrane protein Function unknown 82699441 Common - Glycosyl transferase, group 1 BAB1_0563 190 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 82700372 Pathogen - hypothetical protein BAB1_1582 1 None None None 82699534 Common - dihydrodipicolinate synthase BAB1_0666 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 82700526 Common - Zinc-containing alcohol dehydrogenase superfamily:Glucose/ribitol dehydrogenase BAB1_1750 185 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 82699803 Common - Protein of unknown function DUF59 BAB1_0952 146 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 82700183 Common cbiM cobalt transport protein CbiM BAB1_1385 35 COG0310 CbiM, ABC-type Co2+ transport system, permease component Inorganic ion transport and metabolism 82699716 Common - phosphoribosylaminoimidazole-succinocarboxamide synthase BAB1_0862 158 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 82700822 Common - hypothetical protein BAB1_2068 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 82699183 Common - Low molecular weight phosphotyrosine protein phosphatase BAB1_0283 71 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 82699401 Pathogen - hypothetical protein BAB1_0520 1 None None None 82700304 Common - Cold-shock DNA-binding domain BAB1_1512 179 COG1278 CspC, Cold shock proteins Transcription 82700070 Common fusA elongation factor G BAB1_1258 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 82700018 Common - 7-cyano-7-deazaguanine reductase BAB1_1206 133 COG0780 COG0780, Enzyme related to GTP cyclohydrolase I General function prediction only 82700748 Common - cyclohexadienyl dehydrogenase BAB1_1989 172 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 82700511 Common - 5-formyltetrahydrofolate cyclo-ligase BAB1_1735 173 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 82699652 Common hppA membrane-bound proton-translocating pyrophosphatase BAB1_0793 98 COG3808 OVP1, Inorganic pyrophosphatase Energy production and conversion 82699628 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0769 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 82700285 Pathogen - hypothetical protein BAB1_1491 1 None None None 82700684 Common lpdA-2 dihydrolipoamide dehydrogenase BAB1_1918 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 82699241 Pathogen - hypothetical protein BAB1_0347 1 None None None 82699087 Common hrcA heat-inducible transcription repressor BAB1_0171 148 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 82699988 Common lpxB lipid-A-disaccharide synthase BAB1_1171 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 82699602 Common - UDP-glucose 4-epimerase BAB1_0734 138 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 82700381 Common - hypothetical protein BAB1_1591 18 COG5345 COG5345, Uncharacterized protein conserved in bacteria Function unknown 82699172 Common - hypothetical protein BAB1_0272 7 None None None 82700499 Common - Inositol phosphatase/fructose-1,6-bisphosphatase:Inositol monophosphatase BAB1_1723 215 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 82700404 Common - DegT/DnrJ/EryC1/StrS aminotransferase BAB1_1616 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 82699016 Common - Heme exporter protein D (CcmD) BAB1_0094 4 None None None 82700605 Pathogen - hypothetical protein BAB1_1835 1 None None None 82699129 Common - Bacterial regulatory protein, MerR family:ATP/GTP-binding site motif A (P-loop) BAB1_0222 131 COG0789 SoxR, Predicted transcriptional regulators Transcription 82699794 Common - tyrosyl-tRNA synthetase BAB1_0943 218 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82700062 Common rplV 50S ribosomal protein L22 BAB1_1250 216 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 82700033 Common - isocitrate dehydrogenase BAB1_1221 62 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 82699425 Common gmd Short-chain dehydrogenase/reductase SDR:GDP-mannose 4,6-dehydratase BAB1_0545 226 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 82699873 Common - Protein of unknown function DUF330 BAB1_1041 25 COG3218 COG3218, ABC-type uncharacterized transport system, auxiliary component General function prediction only 82699317 Common glyQ glycyl-tRNA synthetase subunit alpha BAB1_0431 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 82699637 Common - arginyl-tRNA-protein transferase BAB1_0778 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 82700237 Common ligA NAD-dependent DNA ligase LigA BAB1_1439 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 82699512 Common - ATP/GTP-binding site motif A (P-loop):Uracil-DNA glycosylase superfamily:Phage SPO1 DNA polymerase-related protein BAB1_0644 154 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 82700268 Common - hypothetical protein BAB1_1470 4 COG5586 COG5586, Uncharacterized conserved protein Function unknown 82700541 Pathogen - hypothetical protein BAB1_1767 1 None None None 82700889 Common - Binding-protein-dependent transport systems inner membrane component BAB1_2143 221 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 82700394 Common - tRNA/rRNA methyltransferase (SpoU) BAB1_1606 201 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 82700811 Common - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_2057 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 82700178 Common - Urease accessory protein UreF BAB1_1380 42 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 82699386 Common - Ribosomal protein S7 BAB1_0505 52 COG4233 COG4233, Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis Posttranslational modification, protein turnover, chaperones / Energy production and conversion 82699567 Pathogen - 2-isopropylmalate synthase BAB1_0699 1 None None None 82699378 Common - Copper center Cu(A):Cytochrome c oxidase, subunit II BAB1_0492 146 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 82699883 Common - hypothetical protein BAB1_1053 43 COG3768 COG3768, Predicted membrane protein Function unknown 82700077 Common rplL 50S ribosomal protein L7/L12 BAB1_1265 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 82699000 Common - Cytochrome c heme-binding site:Conserved hypothetical protein 48:Radical SAM BAB1_0074 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 82700592 Common - hypothetical protein BAB1_1820 4 COG5508 COG5508, Uncharacterized conserved small protein Function unknown 162002875 Common hisI phosphoribosyl-AMP cyclohydrolase BAB1_1098 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 82700011 Common - hypothetical protein BAB1_1195 31 COG5458 COG5458, Uncharacterized conserved protein Function unknown 82699564 Pathogen - hypothetical protein BAB1_0696 1 None None None 82699742 Common - Sel1-like repeat BAB1_0891 76 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 82699191 Pathogen - hypothetical protein BAB1_0294 1 None None None 82699726 Common - 3-oxoacyl-(acyl carrier protein) synthase II BAB1_0872 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82700292 Common rpoD RNA polymerase sigma factor RpoD BAB1_1498 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 82700299 Common - hypothetical protein BAB1_1505 14 COG5395 COG5395, Predicted membrane protein Function unknown 82699946 Pathogen - hypothetical protein BAB1_1127 1 None None None 82699722 Common purB adenylosuccinate lyase BAB1_0868 238 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 82700574 Pathogen - hypothetical protein BAB1_1802 1 None None None 82699284 Common - Helix-turn-helix, AraC type:Methylated-DNA-[protein]-cysteine S-methyltransferase:Metal binding domain of Ada BAB1_0398 175 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 82699107 Common - sulfate adenylyltransferase subunit 2 BAB1_0193 131 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 82700916 Common - SAM (and some other nucleotide) binding motif BAB1_2170 19 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 82699090 Common - coproporphyrinogen III oxidase BAB1_0176 215 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 82699776 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit BAB1_0925 188 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 82699141 Common - Bacterial regulatory protein, MarR family:Bacterial regulatory proteins, IclR family BAB1_0237 102 COG1414 IclR, Transcriptional regulator Transcription 82699099 Common - Methylated-DNA-[protein]-cysteine S-methyltransferase BAB1_0185 217 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 82699639 Common hemB delta-aminolevulinic acid dehydratase BAB1_0780 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 82698988 Pathogen - hypothetical protein BAB1_0062 2 None None None 82699010 Common - hypothetical protein BAB1_0088 33 COG5429 COG5429, Uncharacterized secreted protein Function unknown 82699354 Common - ABC transporter, transmembrane region:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase BAB1_0468 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 82699254 Common fpr Phenol hydroxylase reductase:Oxidoreductase FAD/NAD(P)-binding:Flavoprotein pyridine nucleotide cytochrome reductase:NADH:cyt... BAB1_0361 120 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 82699497 Common - ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein, C-term... BAB1_0629 206 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 82700783 Common bolA Basic helix-loop-helix dimerization domain bHLH:BolA-like protein BAB1_2027 98 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 82699071 Common - OstA-like protein BAB1_0155 26 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 82700896 Common - DNA starvation/stationary phase protection protein Dps BAB1_2150 90 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 82699865 Common nadE NAD synthetase BAB1_1033 235 COG0171 NadE, NAD synthase Coenzyme metabolism 82699925 Common - Site-specific recombinase:Resolvase, N-terminal BAB1_1104 129 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 82700866 Common - Protein of unknown function DUF45 BAB1_2115 150 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 82699634 Common aspS aspartyl-tRNA synthetase BAB1_0775 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 82698966 Common - molybdopterin biosynthesis enzyme BAB1_0037 40 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 82700100 Common - D-alanine--D-alanine ligase/VANA/B/C:D-alanine--D-alanine ligase BAB1_1291 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 82699017 Common - Periplasmic protein thiol:disulfide oxidoreductase DsbE:Thioredoxin type domain:Thioredoxin domain 2 BAB1_0095 150 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 82700451 Pathogen - hypothetical protein BAB1_1674 2 None None None 82700629 Common - transposase, putative BAB1_1859 46 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699361 Common - replicative DNA helicase BAB1_0475 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 82699469 Common - hypothetical protein BAB1_0597 20 None None None 82700914 Common rpsO 30S ribosomal protein S15 BAB1_2168 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 82700417 Pathogen - hypothetical protein BAB1_1633 2 None None None 82699231 Common - Helix-turn-helix, AraC type:Family of unknown function ThiJ/PfpI BAB1_0337 86 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 82699539 Common - DNA-directed RNA polymerase subunit omega BAB1_0671 115 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 82699312 Pathogen - hypothetical protein BAB1_0426 1 None None None 82699826 Pathogen - hypothetical protein BAB1_0986 1 None None None 82700660 Common - SAM (and some other nucleotide) binding motif BAB1_1892 84 COG3897 COG3897, Predicted methyltransferase General function prediction only 82698978 Common - hypothetical protein BAB1_0052 5 None None None 82699641 Common - hypothetical protein BAB1_0782 12 None None None 82700709 Common secA preprotein translocase subunit SecA BAB1_1946 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 82698945 Pathogen - hypothetical protein BAB1_0013 1 None None None 82700795 Common - Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase BAB1_2039 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 82699120 Common - RNA-binding region RNP-1 (RNA recognition motif):Binding-protein-dependent transport systems inner membrane component BAB1_0212 176 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 82699138 Common soxD Sarcosine oxidase, delta subunit, heterotetrameric BAB1_0231 33 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 82700477 Common - heat resistant agglutinin 1 precursor BAB1_1701 25 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 82700156 Common - CBS domain:Transporter associated domain:Integral membrane protein TerC family BAB1_1353 216 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 82700140 Pathogen - hypothetical protein BAB1_1335 1 None None None 82700229 Common - serine/threonine protein kinase BAB1_1431 10 COG2112 COG2112, Predicted Ser/Thr protein kinase Signal transduction mechanisms 82698971 Common - Bacterial surface antigen (D15) BAB1_0045 130 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 82700865 Common - hypothetical protein BAB1_2114 11 COG1434 COG1434, Uncharacterized conserved protein Function unknown 82699085 Common - hypothetical protein BAB1_0169 132 COG2860 COG2860, Predicted membrane protein Function unknown 82699111 Common - Bacterial regulatory protein, LuxR family BAB1_0197 160 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 82700311 Common - Pyrokinin:Potassium channel TASK:Cation transporter BAB1_1519 162 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 82698991 Common - Hly-III related proteins BAB1_0065 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 82700639 Common - hypothetical protein BAB1_1869 32 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 82700461 Common - Secretion protein HlyD BAB1_1685 176 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 82700932 Common rpsT 30S ribosomal protein S20 BAB1_2186 185 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 82699516 Pathogen - hypothetical protein BAB1_0648 1 None None None 82699446 Common - iolE protein BAB1_0568 58 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 82700632 Pathogen - hypothetical protein BAB1_1862 2 None None None 82699218 Pathogen - hypothetical protein BAB1_0324 2 None None None 82699474 Common - Putative peptidoglycan binding domain 1 BAB1_0602 8 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 82699615 Common - Integrase, catalytic domain BAB1_0747 50 None None None 82700432 Common gabD Aldehyde dehydrogenase BAB1_1655 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 82700638 Common clpB Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region:Clp, N terminal BAB1_1868 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 82700741 Common - argininosuccinate lyase BAB1_1982 235 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 82699918 Common - Nitrogen-fixing NifU-like, N-terminal BAB1_1096 89 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 82700179 Common - Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop):Ras GTPase superfamily:HypB/UreG, nucleotide-binding:Urease accessory... BAB1_1381 138 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 82700357 Common - hypothetical protein BAB1_1565 9 None None None 82700790 Common - Pollen allergen Poa pIX/Phl pVI, C-terminal BAB1_2034 49 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 82700122 Common - cobyrinic acid a,c-diamide synthase BAB1_1316 140 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 82699416 Common - Bacterial regulatory protein LacI, HTH motif BAB1_0536 18 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699935 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase BAB1_1116 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 82700468 Common - Thromboxane receptor:General substrate transporter:Major facilitator superfamily (MFS) BAB1_1692 155 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 82700832 Common - Helix-turn-helix motif BAB1_2078 12 COG1396 HipB, Predicted transcriptional regulators Transcription 82700495 Common - thiamine-phosphate pyrophosphorylase BAB1_1719 63 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 82699704 Pathogen - hypothetical protein BAB1_0847 2 None None None 82699954 Pathogen - hypothetical protein BAB1_1135 1 None None None 82700222 Pathogen - hypothetical protein BAB1_1424 2 None None None 82700765 Common - Response regulator receiver:Transcriptional regulatory protein, C terminal BAB1_2006 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82699372 Common - 3-oxoacyl-(acyl carrier protein) synthase II BAB1_0486 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 82699763 Common - hypothetical protein BAB1_0912 59 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 82700127 Common - Antifreeze protein, type I BAB1_1321 8 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 82700532 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit BAB1_1758 195 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 82700828 Common fxsA FxsA BAB1_2074 69 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 82699543 Common - coproporphyrinogen III oxidase BAB1_0675 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 82700622 Common proB gamma-glutamyl kinase BAB1_1852 190 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 82699431 Common - Transposase, IS4 BAB1_0551 57 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 82699689 Common nuoK NADH dehydrogenase subunit K BAB1_0832 133 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 82700057 Common rplN 50S ribosomal protein L14 BAB1_1245 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 82700255 Common - hypothetical protein BAB1_1457 17 COG5462 COG5462, Predicted secreted (periplasmic) protein Function unknown 82700111 Common - hypothetical protein BAB1_1302 19 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 82700093 Common - WW/Rsp5/WWP domain:Bacterial transferase hexapeptide repeat:Serine O-acetyltransferase BAB1_1281 208 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 82700524 Common - Phenylacetic acid degradation-related protein:Thioesterase superfamily BAB1_1748 76 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 82700343 Common - 50S ribosomal protein L25/general stress protein Ctc BAB1_1551 191 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 82700105 Common - hypothetical protein BAB1_1296 54 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 82699347 Common - Protein of unknown function DUF209:Cupin domain BAB1_0461 145 COG1741 COG1741, Pirin-related protein General function prediction only 82700012 Pathogen - hypothetical protein BAB1_1198 2 None None None 82700249 Common ftsW Cell cycle protein:Phosphopantetheine attachment site BAB1_1451 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 82699467 Common - hypothetical protein BAB1_0595 3 None None None 82699673 Pathogen - hypothetical protein BAB1_0816 1 None None None 82699834 Common - Glycosyl transferase, group 1 BAB1_1000 53 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 82699152 Common - Mandelate racemase/muconate lactonizing enzyme BAB1_0248 106 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 82699075 Common - Sigma 54 modulation protein/ribosomal protein S30EA BAB1_0159 55 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 82700536 Common - hypothetical protein BAB1_1762 18 COG5480 COG5480, Predicted integral membrane protein Function unknown 82699339 Common - hypothetical protein BAB1_0453 6 None None None 82699665 Common - hypothetical protein BAB1_0806 7 None None None 82700439 Common - glutamyl-Q tRNA(Asp) synthetase BAB1_1662 245 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 82698981 Common pgm phosphoglucomutase BAB1_0055 193 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 82699417 Common - INSERTION ELEMENT ISR1 HYPOTHETICAL 10 KD PROTEIN A3 BAB1_0537 3 None None None 82699170 Common - zinc-dependent metallopeptidase BAB1_0270 11 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 82699067 Common - hypothetical protein BAB1_0151 12 None None None 82699787 Pathogen - IS711, transposase orfA BAB1_0936 1 None None None 82700691 Common sucC succinyl-CoA synthetase subunit beta BAB1_1926 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 82700344 Common pth peptidyl-tRNA hydrolase BAB1_1552 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 82700328 Pathogen - hypothetical protein BAB1_1536 1 None None None 82698957 Common - transglycosylase, putative BAB1_0028 104 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 82700441 Common - GCN5-related N-acetyltransferase BAB1_1664 123 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 82699573 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase BAB1_0705 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 82699400 Common - hypothetical protein BAB1_0519 24 COG5389 COG5389, Uncharacterized protein conserved in bacteria Function unknown 82700879 Common - orotidine 5'-phosphate decarboxylase BAB1_2132 172 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 82700667 Common - Glyoxalase/Bleomycin resistance protein/dioxygenase domain BAB1_1899 63 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 82700138 Common - Acyl-CoA dehydrogenase:Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central domain:Acyl-CoA dehydrogenase, N-te... BAB1_1333 160 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 82700147 Common - bifunctional preprotein translocase subunit SecD/SecF BAB1_1344 207 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 82700844 Common - Response regulator receiver:Transcriptional regulatory protein, C terminal BAB1_2092 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 82700241 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase BAB1_1443 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 82700326 Common - Beta-lactamase-like BAB1_1534 218 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 82699148 Common - Oxidoreductase, N-terminal BAB1_0244 67 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 82700350 Common petB Cytochrome b/b6, N-terminal:Cytochrome b/b6, C-terminal BAB1_1558 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 82700360 Common - Polynucleotide adenylyltransferase BAB1_1570 203 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 82699026 Common - Prokaryotic sulfate-/thiosulfate-binding protein:Bacterial extracellular solute-binding protein, family 1 BAB1_0104 90 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 82700731 Common etfB Electron transfer flavoprotein beta-subunit BAB1_1972 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 82699034 Common cscK Ribokinase:Carbohydrate kinase, PfkB BAB1_0112 75 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 82700653 Common - hypothetical protein BAB1_1885 25 COG4223 COG4223, Uncharacterized protein conserved in bacteria Function unknown 82700774 Common - Bacterial regulatory protein, MerR family BAB1_2018 141 COG0789 SoxR, Predicted transcriptional regulators Transcription