Psychrobacter arcticus 273-4, complete genome NC_007204 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 71066419 Nonpathogen - hypothetical protein Psyc_1864 1 None None None 71065339 Common - hypothetical protein Psyc_0779 3 None None None 71065488 Common - possible rare lipoprotein A family Psyc_0928 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 71066493 Common sodB probable superoxide dismutase Psyc_1938 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 71065078 Common rplO 50S ribosomal protein L15 Psyc_0508 203 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 71064779 Common lysA probable diaminopimelate decarboxylase Psyc_0199 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 71065921 Common - hypothetical protein Psyc_1366 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 71066118 Common pb putative penicillin-binding protein Psyc_1563 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 71065184 Common modA ABC molybdenum transporter, periplasmic binding protein ModA Psyc_0617 131 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 71066275 Common - hypothetical protein Psyc_1720 16 None None None 71065177 Common moeA probable molybdopterin biosynthesis protein Psyc_0610 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 71066370 Common pilJ putative chemotaxis sensory transducer Psyc_1815 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 71066092 Common ntrB possible Signal transduction Histidine kinase sensor Psyc_1537 181 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 71066107 Common orn oligoribonuclease Psyc_1552 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 71066204 Common - hypothetical protein Psyc_1649 5 None None None 71065102 Common - electron transport flavoprotein beta-subunit Psyc_0532 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 71064620 Common - probable heat shock protein DnaJ Psyc_0039 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 71064994 Common - possible type I restriction enzyme, R subunit Psyc_0424 125 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 71065666 Common - probable transcriptional regulator, LysR family Psyc_1108 189 COG0583 LysR, Transcriptional regulator Transcription 71064753 Common ispE possible 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Psyc_0173 191 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 71066358 Common - hypothetical protein Psyc_1803 48 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 71066227 Common - transcriptional regulator, LysR family Psyc_1672 179 COG0583 LysR, Transcriptional regulator Transcription 71066052 Common ung uracil-DNA glycosylase Psyc_1497 130 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 71066122 Common - bacterial lipid A biosynthesis acyltransferase Psyc_1567 96 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 71066583 Common atpE ATP synthase Fo, C subunit Psyc_2029 73 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 71066620 Nonpathogen - hypothetical protein Psyc_2066 1 None None None 71064781 Common xerC probable site specific recombinase Psyc_0201 222 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 71065331 Common exsB probable ExsB protein Psyc_0771 177 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 71065972 Common - putative outer membrane protein, FadL family Psyc_1417 32 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 71064920 Common rumA 23S rRNA 5-methyluridine methyltransferase Psyc_0344 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 71066351 Common - hypothetical protein Psyc_1796 22 COG2841 COG2841, Uncharacterized protein conserved in bacteria Function unknown 71066111 Common secB preprotein translocase subunit SecB Psyc_1556 108 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 71065653 Common - possible filamentation induced by cAMP protein (Fic) family protein Psyc_1095 102 COG3177 COG3177, Uncharacterized conserved protein Function unknown 71066058 Common proB gamma-glutamyl kinase Psyc_1503 190 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 71066384 Common ccmA ABC exporter, ATPase subunit CcmA Psyc_1829 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 71065818 Common - hypothetical protein Psyc_1261 56 COG3781 COG3781, Predicted membrane protein Function unknown 71065298 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Psyc_0737 139 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 71066679 Common - probable magnesium chelatase-related protein Psyc_2125 194 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 71066377 Common metN ABC methionine transporter, ATPase subunit MetN Psyc_1822 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 71066498 Common - possible c-type cytochrome Psyc_1943 38 COG3258 COG3258, Cytochrome c Energy production and conversion 71065554 Common - hypothetical protein Psyc_0994 4 None None None 71065418 Common pdc putative pyruvate decarboxylase Psyc_0858 220 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 71064616 Common gshA probable glutamate--cysteine ligase Psyc_0035 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 71066437 Common pilN probable type IV pilus biogenesis fimbrial assembly Psyc_1882 43 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 71066627 Common glmU probable UDP-N-acetylglucosamine pyrophosphorylase / diamine N-acetyltransferase Psyc_2073 232 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 71065140 Common macB ABC macrolide efflux transporter MacB, fused ATPase and inner membrane domains Psyc_0572 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 71065551 Nonpathogen - hypothetical protein Psyc_0991 3 None None None 71065934 Common - hypothetical protein Psyc_1379 28 COG5579 COG5579, Uncharacterized conserved protein Function unknown 71066656 Common - probable transposase and inactivated derivatives Psyc_2102 8 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066616 Common - hypothetical protein Psyc_2062 13 None None None 71065539 Nonpathogen - hypothetical protein Psyc_0979 1 None None None 71065035 Common - possible phage terminase, small subunit Psyc_0465 13 COG3747 COG3747, Phage terminase, small subunit DNA replication, recombination, and repair 71066170 Common - hypothetical protein Psyc_1615 36 COG0551 TopA, Zn-finger domain associated with topoisomerase type I DNA replication, recombination, and repair 71065379 Common prfB peptide chain release factor 2 (RF-2) Psyc_0819 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 71066064 Common - hypothetical protein Psyc_1509 91 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 71066446 Common rplK 50S ribosomal protein L11 Psyc_1891 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 71065396 Common - hypothetical protein Psyc_0836 11 COG3339 COG3339, Uncharacterized conserved protein Function unknown 71066513 Common - hypothetical protein Psyc_1959 39 COG4327 COG4327, Predicted membrane protein Function unknown 71065231 Common asnB probable asparagine synthase, glutamine-hydrolyzing Psyc_0665 172 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 71065791 Common - probable modification methylase, HemK family Psyc_1234 218 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 71065616 Common argD acetylornithine aminotransferase Psyc_1057 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 71066163 Common - hypothetical protein Psyc_1608 40 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 71066418 Nonpathogen - hypothetical protein Psyc_1863 1 None None None 71065514 Common arsH NADPH-dependent FMN reductase Psyc_0954 63 COG0431 COG0431, Predicted flavoprotein General function prediction only 71066447 Common nusG NusG antitermination factor Psyc_1892 215 COG0250 NusG, Transcription antiterminator Transcription 71065644 Common - DMT superfamliy efflux pump Psyc_1085 69 None None None 71065916 Common cysS cysteinyl-tRNA synthetase, class Ia Psyc_1361 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065583 Nonpathogen - hypothetical protein Psyc_1023 1 None None None 71066156 Common - hypothetical protein Psyc_1601 57 None None None 71065409 Common - transposase OrfB Psyc_0849 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064728 Common mucD possible serine protease Psyc_0147 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 71064646 Common tpiA triose-phosphate isomerase Psyc_0065 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 71064626 Common - hypothetical protein Psyc_0045 77 COG0795 COG0795, Predicted permeases General function prediction only 71064665 Common - hypothetical protein Psyc_0084 12 None None None 71066150 Nonpathogen - hypothetical protein Psyc_1595 1 None None None 71066700 Common rnpA possible ribonuclease P protein Psyc_2146 49 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 71065965 Common leuB 3-isopropylmalate dehydrogenase Psyc_1410 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 71065623 Common sbcD probable exonuclease SbcCD, D subunit Psyc_1064 87 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 71065736 Common - possible rRNA methyltransferase SpoU family protein Psyc_1178 154 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 71065802 Common purB adenylosuccinate lyase Psyc_1245 234 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 71066451 Common rpsG 30S ribosomal protein S7 Psyc_1896 224 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 71065206 Common - transposase OrfB Psyc_0640 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065955 Common - possible CoA-transferase family III protein Psyc_1400 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 71065894 Common rpsF 30S ribosomal protein S6 Psyc_1337 194 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 71065341 Common lolE ABC lipoprotein exporter, inner membrane subunit, LolE Psyc_0781 196 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 71064588 Common - transposase, orfA, IS3/IS911 family Psyc_0007 25 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066463 Common - hypothetical protein Psyc_1908 104 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 71065265 Common ruvC putative crossover junction endodeoxyribonuclease Psyc_0699 195 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 71066641 Common - hypothetical protein Psyc_2087 61 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 71064863 Common rsu probable RNA pseudouridine synthase Psyc_0286 196 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 71064678 Common gltA citrate synthase Psyc_0097 194 COG0372 GltA, Citrate synthase Energy production and conversion 71066504 Common - probable methyltransferase protein Psyc_1949 50 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 71065444 Nonpathogen - hypothetical protein Psyc_0884 1 None None None 71065778 Common - probable DsrC-like protein Psyc_1221 47 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 71065908 Common nonF ThiJ/PfpI family protein Psyc_1353 105 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 71064670 Common hemC putative porphobilinogen deaminase Psyc_0089 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 71064734 Nonpathogen - hypothetical protein Psyc_0154 2 None None None 71066136 Nonpathogen - hypothetical protein Psyc_1581 1 None None None 71065006 Common lysM possible Peptidoglycan-binding LysM Psyc_0436 4 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 71065824 Nonpathogen - hypothetical protein Psyc_1267 1 None None None 71066292 Common folP putative dihydropteroate synthase, DHPS Psyc_1737 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 71066043 Common - hypothetical protein Psyc_1488 5 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 71065784 Common accC putative acetyl-CoA carboxylase, biotin carboxylase Psyc_1227 222 COG0439 AccC, Biotin carboxylase Lipid metabolism 71066687 Common - heat shock protein GrpE, hsp70 family Psyc_2133 228 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 71065355 Common rnd putative ribonuclease D Psyc_0795 109 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 71065711 Common - probable cytochrome c family protein Psyc_1153 39 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 71064748 Nonpathogen - hypothetical protein Psyc_0168 8 COG1714 COG1714, Predicted membrane protein/domain Function unknown 71065598 Common - probable hydroxyacylglutathione hydrolase Psyc_1038 189 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 71066428 Common gltD glutamate synthase subunit beta Psyc_1873 187 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 71065854 Nonpathogen - hypothetical protein Psyc_1297 1 None None None 71066267 Common - hypothetical protein Psyc_1712 2 None None None 71065066 Common rplP 50S ribosomal protein L16 Psyc_0496 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 71066596 Common - hypothetical protein Psyc_2042 31 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 71065367 Common - probable transcriptional regulatory protein, IclR family Psyc_0807 100 COG1414 IclR, Transcriptional regulator Transcription 71065254 Common - hypothetical protein Psyc_0688 2 None None None 71065727 Common - acetyl-CoA acetyltransferase Psyc_1169 178 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 71065525 Common - putative acyl-CoA dehydrogenase Psyc_0965 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71065048 Common - possible phage TraR/DksA family protein Psyc_0478 7 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 71065528 Common ahcY S-adenosyl-L-homocysteine hydrolase Psyc_0968 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 71066197 Common ompN possible porin, gram-negative type Psyc_1642 26 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 71065222 Common neuA2 putative Acylneuraminate cytidylyltransferase Psyc_0656 96 COG1083 NeuA, CMP-N-acetylneuraminic acid synthetase Cell envelope biogenesis, outer membrane 71064858 Common - beta-hexosaminidase Psyc_0281 173 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 71065243 Common purA putative adenylosuccinate synthetase Psyc_0677 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 71065497 Common - putative transposase OrfB Psyc_0937 138 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066567 Common uvrC probable excinuclease ABC, subunit C Psyc_2013 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 71065301 Common - hypothetical protein Psyc_0740 32 COG3496 COG3496, Uncharacterized conserved protein Function unknown 71065455 Common - hypothetical protein Psyc_0895 2 None None None 71065111 Common pyrC putative dihydroorotase-like protein Psyc_0543 204 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 71065747 Common apt adenine phosphoribosyltransferase Psyc_1189 166 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 71065240 Common corA magnesium and cobalt transport protein CorA Psyc_0674 167 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 71064799 Common hemF coproporphyrinogen III oxidase Psyc_0219 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 71066236 Common - probable HesA/MoeB/ThiF family protein Psyc_1681 207 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 71065381 Common - probable acetyl-CoA synthetase Psyc_0821 217 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 71065085 Common rplQ 50S ribosomal protein L17 Psyc_0515 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 71066400 Common - hypothetical protein Psyc_1845 116 COG2855 COG2855, Predicted membrane protein Function unknown 71066691 Common thrC threonine synthase Psyc_2137 147 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 71066607 Common murE probable UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Psyc_2053 209 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 71065794 Common - probable glucose dehydrogenase (PQQ dependent) Psyc_1237 59 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 71066262 Common ffh signal recognition particle protein Psyc_1707 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 71064773 Common - probable transport protein, TerC family Psyc_0193 217 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 71065476 Common - hypothetical protein Psyc_0916 81 COG1742 COG1742, Uncharacterized conserved protein Function unknown 71065884 Common aceF dihydrolipoyllysine acetyltransferase component of pyruvate dehydrogenase complex Psyc_1327 196 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 71064890 Common acd putative acyl-CoA dehydrogenase Psyc_0313 170 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71066565 Common thyA thymidylate synthase Psyc_2011 139 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 71064989 Common - hypothetical protein Psyc_0419 24 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 71064934 Common - probable peptidyl-prolyl cis-trans isomerase protein, FKBP-type Psyc_0358 135 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 71064975 Common dcm probable C-5 cytosine-specific DNA methylase Psyc_0401 81 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 71065764 Common - probable Glycosyl transferase, family 2 Psyc_1206 125 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 71066190 Common ftsB possible septum formation initiator protein Psyc_1635 61 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 71066423 Common parC DNA topoisomerase IV subunit A Psyc_1868 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 71066536 Common rbgA ribosomal biogenesis GTPase Psyc_1982 108 COG1161 COG1161, Predicted GTPases General function prediction only 71065450 Common tatD probable Mg-dependent deoxyribonuclease, TatD family Psyc_0890 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 71066665 Common - hypothetical protein Psyc_2111 9 COG2991 COG2991, Uncharacterized protein conserved in bacteria Function unknown 71066245 Nonpathogen - hypothetical protein Psyc_1690 5 COG1550 COG1550, Uncharacterized protein conserved in bacteria Function unknown 71065225 Common - probable methionyl-tRNA formyltransferase Psyc_0659 63 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 71064811 Nonpathogen fimT possible type IV pilin protein Psyc_0233 1 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 71065194 Common ubiH possible 2-octaprenyl-6-methoxyphenol hydroxylase Psyc_0628 135 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 71064800 Common ribA probable GTP cyclohydrolase II Psyc_0220 178 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 71066169 Common - glucose-methanol-choline oxidoreductase:GMC oxidoreductase Psyc_1614 89 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 71066020 Common ppnK inorganic polyphosphate/ATP-NAD kinase Psyc_1465 236 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 71065260 Common glnS glutaminyl-tRNA synthetase Psyc_0694 246 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 71064836 Common - GTPase EngB Psyc_0259 180 COG0218 COG0218, Predicted GTPase General function prediction only 71066542 Common rluA probable pseudouridine synthase, 23S rRNA-specific Psyc_1988 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 71066231 Common moxR probable methanol dehydrogenase regulatory protein Psyc_1676 171 COG0714 COG0714, MoxR-like ATPases General function prediction only 71065399 Common sotB sugar efflux transporter Psyc_0839 172 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065083 Common rpsD 30S ribosomal protein S4 Psyc_0513 216 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 71065290 Common betB betaine aldehyde dehydrogenase Psyc_0729 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 71065745 Common tal transaldolase B Psyc_1187 185 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 71065309 Common - TRAP-T family transporter, fused inner membrane subunits Psyc_0748 72 COG4666 COG4666, TRAP-type uncharacterized transport system, fused permease components General function prediction only 71066617 Nonpathogen - hypothetical protein Psyc_2063 13 None None None 71065998 Common fdhD probable formate dehydrogenase accessory protein FdhD Psyc_1443 135 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 71065985 Common lpsI coenzyme A transferase Psyc_1430 103 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 71065756 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Psyc_1198 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 71065772 Common rfbC putative dTDP-4-dehydrorhamnose 3,5-epimerase Psyc_1215 166 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 71066476 Common - probable metallopeptidase peptidase Psyc_1921 178 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 71066206 Common glcE glycolate oxidase FAD binding subunit Psyc_1651 153 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 71065763 Common - hypothetical protein Psyc_1205 14 None None None 71064707 Common ompR osmolarity response regulator Psyc_0126 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71064886 Common - putative acyl-CoA carboxylase (beta subunit) protein Psyc_0309 146 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 71065238 Common - hypothetical protein Psyc_0672 17 None None None 71065863 Common - possible beta-lactamase protein Psyc_1306 30 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 71065698 Common mdcG probable malonyl-CoA ACP transacylase Psyc_1140 208 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 71066345 Common - probable metallo-beta-lactamase superfamily protein Psyc_1790 175 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 71066185 Nonpathogen - hypothetical protein Psyc_1630 1 None None None 71066529 Nonpathogen - hypothetical protein Psyc_1975 1 None None None 71065432 Common motB probable OmpA/MotB Psyc_0872 52 COG1360 MotB, Flagellar motor protein Cell motility and secretion 71066696 Common - hypothetical protein Psyc_2142 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 71065718 Common - hypothetical protein Psyc_1160 42 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 71064699 Common - hypothetical protein Psyc_0118 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 71065362 Common - ATPase protein, AAA family Psyc_0802 99 COG0714 COG0714, MoxR-like ATPases General function prediction only 71064951 Common metX homoserine O-acetyltransferase Psyc_0375 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 71065584 Nonpathogen - hypothetical protein Psyc_1024 1 None None None 71065684 Common recD probable exonuclease V, alpha subunit Psyc_1126 124 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 71065705 Common madM malonate/sodium symporter, MadM subunit Psyc_1147 13 None None None 71065573 Nonpathogen - hypothetical protein Psyc_1013 1 None None None 71064591 Nonpathogen - hypothetical protein Psyc_0010 1 None None None 71065210 Common - putative transposase OrfA, IS3/IS911family Psyc_0644 54 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065050 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B Psyc_0480 212 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 71066364 Common minD putative septum site determining protein (ATPase activity) MinD Psyc_1809 157 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 71065832 Common - hypothetical protein Psyc_1275 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 71066199 Common - possible tRNA-(ms(2)io(6)a)-hydroxylase Psyc_1644 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 71066220 Common - possible transcriptional regulator, TetR family Psyc_1665 61 COG1309 AcrR, Transcriptional regulator Transcription 71064945 Common serA D-3-phosphoglycerate dehydrogenase Psyc_0369 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 71065285 Common - probable Signal transduction histidine kinase sensor Psyc_0719 220 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 71064715 Common - glycerol-3-phosphate acyltransferase Psyc_0134 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 71066353 Common - possible transcriptional regulator, LysR-family Psyc_1798 190 COG0583 LysR, Transcriptional regulator Transcription 71065874 Common - possible biopolymer transport protein ExbD/TolR Psyc_1317 35 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 71065668 Common prpB 2-methylisocitrate lyase Psyc_1110 136 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 71065001 Common - probable N-(5'phosphoribosyl)anthranilate isomerase (PRAI) Psyc_0431 198 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 71066309 Nonpathogen - hypothetical protein Psyc_1754 1 None None None 71065013 Common - putative prophage LambdaSo, host specificity protein J Psyc_0443 20 COG4733 COG4733, Phage-related protein, tail component Function unknown 71066001 Common malT probable transcriptional regulator, luxR family Psyc_1446 51 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 71066409 Common - hypothetical protein Psyc_1854 8 None None None 71065262 Common - putative alkyl hydroperoxide reductase Psyc_0696 208 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 71066252 Common - possible metal-dependent phosphoesterase (PHP family) Psyc_1697 124 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 71064876 Common - probable fumarylacetoacetate (FAA) hydrolase Psyc_0299 178 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 71065649 Nonpathogen - hypothetical protein Psyc_1091 1 None None None 71066012 Common - possible ErfK/YbiS/YcfS/YnhG protein family Psyc_1457 86 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 71066073 Common - hypothetical protein Psyc_1518 88 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 71066080 Common - sodium-dependent transporter, NSS family Psyc_1525 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 71065370 Common - amino acid transporter, APC superfamily Psyc_0810 164 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 71065728 Common paaH 3-hydroxybutyryl-CoA dehydrogenase Psyc_1170 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 71066331 Common - hypothetical protein Psyc_1776 8 COG4539 COG4539, Predicted membrane protein Function unknown 71065637 Common bfr ferritin:Bacterioferritin Psyc_1078 102 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 71065721 Common - probable Signal Transduction Histidine kinase sensor Psyc_1163 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71065990 Common - ABC transporter, substrate-binding protein Psyc_1435 56 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 71066143 Common - possible Beta-lactamase-like superfamily protein Psyc_1588 211 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 71065602 Common - possible iron-containing alcohol dehydrogenase Psyc_1042 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 71066397 Common - probable peptidase M16 familiy Psyc_1842 62 COG1026 COG1026, Predicted Zn-dependent peptidases, insulinase-like General function prediction only 71065839 Common purF amidophosphoribosyltransferase Psyc_1282 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 71066283 Common - hypothetical protein Psyc_1728 2 None None None 71065422 Common - hypothetical protein Psyc_0862 16 None None None 71066024 Common - hypothetical protein Psyc_1469 5 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 71065005 Common folC probable folylpolyglutamate synthetase/dihydrofolate synthase Psyc_0435 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 71066096 Nonpathogen - hypothetical protein Psyc_1541 1 None None None 71065517 Common argF ornithine carbamoyltransferase Psyc_0957 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 71064818 Common - probable pilus assembly protein major pilin PilA Psyc_0240 7 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 71065217 Common - NAD-dependent epimerase Psyc_0651 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 71066462 Common - hypothetical protein Psyc_1907 60 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 71064832 Common - hypothetical protein Psyc_0255 60 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 71066216 Common - hypothetical protein Psyc_1661 2 None None None 71065099 Common ilvC ketol-acid reductoisomerase Psyc_0529 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 71066335 Nonpathogen - hypothetical protein Psyc_1780 5 None None None 71064984 Nonpathogen - hypothetical protein Psyc_0412 1 None None None 71065055 Common mreD possible rod shape-determining protein MreD Psyc_0485 42 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 71065436 Common - hypothetical protein Psyc_0876 15 None None None 71065134 Common - hypothetical protein Psyc_0566 12 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 71066034 Common - possible HesB/YadR/YfhF family protein Psyc_1479 165 COG0316 IscA, Uncharacterized conserved protein Function unknown 71064606 Common - hypothetical protein Psyc_0025 52 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 71065566 Nonpathogen - hypothetical protein Psyc_1006 4 None None None 71064943 Common - hypothetical protein Psyc_0367 34 None None None 71066470 Common - hypothetical protein Psyc_1915 13 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 71066250 Common - possible acetyltransferase protein Psyc_1695 15 COG0456 RimI, Acetyltransferases General function prediction only 71066435 Common pilP probable type IV pilus assembly Psyc_1880 36 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 71064732 Nonpathogen - hypothetical protein Psyc_0151 1 None None None 71064769 Common - hypothetical protein Psyc_0189 25 COG1403 McrA, Restriction endonuclease Defense mechanisms 71064882 Common gltK ABC glutamate/aspartate transporter, inner membrane subunit GltK Psyc_0305 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 71064688 Common galE UDP-glucose 4-epimerase Psyc_0107 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 71065508 Common murB probable UDP-N-acetylenolpyruvoylglucosamine reductase Psyc_0948 121 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 71066089 Common frr ribosome recycling/releasing factor (RRF) Psyc_1534 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 71065235 Nonpathogen - hypothetical protein Psyc_0669 2 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 71066677 Common - hypothetical protein Psyc_2123 11 None None None 71064927 Common tsf elongation factor Ts Psyc_0351 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 71064980 Common - transposase, IS4 family related Psyc_0407 27 None None None 71065816 Common dnaG probable DNA primase Psyc_1259 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 71064618 Common - ABC transporter related protein, fused ATPase domains Psyc_0037 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 71065600 Common - ABC peptide transporter, inner membrane subunit Psyc_1040 219 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 71065552 Nonpathogen - hypothetical protein Psyc_0992 1 None None None 71064649 Common nusA transcription elongation factor NusA Psyc_0068 216 COG0195 NusA, Transcription elongation factor Transcription 71066382 Common ccmC heme exporter, subunit CcmC Psyc_1827 150 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 71065081 Common rpsM 30S ribosomal protein S13 Psyc_0511 238 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 71065906 Common - probable transcriptional regulator, TetR family Psyc_1351 82 COG1309 AcrR, Transcriptional regulator Transcription 71064871 Common - ABC basic amino acid transporter, ATPase subunit Psyc_0294 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 71065256 Common - hypothetical protein Psyc_0690 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 71065319 Common - hypothetical protein Psyc_0759 13 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 71064640 Common - hypothetical protein Psyc_0059 33 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 71065968 Common leuC isopropylmalate isomerase large subunit Psyc_1413 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 71065312 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Psyc_0751 214 COG1049 AcnB, Aconitase B Energy production and conversion 71065273 Nonpathogen - hypothetical protein Psyc_0707 1 None None None 71065725 Common - probable acyl-CoA thioesterase Psyc_1167 58 COG0824 FcbC, Predicted thioesterase General function prediction only 71066465 Common pfkB possible carbohydrate kinase, PfkB family Psyc_1910 177 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 71066071 Common cydB cytochrome bd ubiquinol oxidase, subunit II Psyc_1516 154 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 71066449 Common tufBb elongation factor Tu Psyc_1894 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 71065953 Common fadA4 acetyl-CoA acetyltransferase Psyc_1398 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 71066240 Common uvrA excinuclease ABC, A subunit Psyc_1685 235 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 71065614 Common dnaX probable DNA polymerase III, gamma/tau subunits Psyc_1055 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 71065963 Common truA tRNA pseudouridine synthase A Psyc_1408 231 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 71066300 Common ftsZ cell division protein FtsZ Psyc_1745 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 71066591 Common dksA probable RpoS regulator, TraR/DksA family Psyc_2037 150 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 71065281 Common - hypothetical protein Psyc_0715 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 71064805 Common - hypothetical protein Psyc_0225 11 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 71065310 Common lipA lipoyl synthase Psyc_0749 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 71065317 Common - hypothetical protein Psyc_0757 14 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 71064604 Common - hypothetical protein Psyc_0023 134 COG1739 COG1739, Uncharacterized conserved protein Function unknown 71066403 Nonpathogen - hypothetical protein Psyc_1848 1 None None None 71066056 Common argC probable N-acetyl-gamma-glutamyl-phosphate reductase Psyc_1501 216 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 71065646 Common - hypothetical protein Psyc_1088 17 COG3654 Doc, Prophage maintenance system killer protein General function prediction only 71065958 Common tyrB aromatic amino acid aminotransferase Psyc_1403 74 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 71064693 Common mazG nucleoside triphosphate pyrophosphohydrolase Psyc_0112 154 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 71066036 Common hscA chaperone protein HscA Psyc_1481 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 71065130 Common - possible oxygenase Psyc_0562 30 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 71065032 Common - probable phage prohead protease, HK97 family Psyc_0462 28 COG3740 COG3740, Phage head maturation protease General function prediction only 71066325 Common - hypothetical protein Psyc_1770 7 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 71064603 Common - hypothetical protein Psyc_0022 68 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 71064783 Common rpoN probable Sigma-54 factor family (RpoN) Psyc_0203 142 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 71066094 Common ppkA putative Protein kinase:Serine/Threonine protein kinase Psyc_1539 134 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 71065052 Common gatC glutamyl-tRNA(Gln) amidotransferase, C subunit Psyc_0482 110 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 71066229 Common - possible transglutaminase-like superfamily protein Psyc_1674 94 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 71066491 Common - hypothetical protein Psyc_1936 75 COG1801 COG1801, Uncharacterized conserved protein Function unknown 71066581 Common atpH ATP synthase F1, delta subunit Psyc_2027 163 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 71065781 Common hemN_rel probable oxygen-independent coproporphyrinogen III oxidase Psyc_1224 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 71064760 Common - probable AMP-dependent synthetase and ligase family protein Psyc_0180 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71065076 Common rpsE 30S ribosomal protein S5 Psyc_0506 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 71064784 Common yfiA putative sigma 54 (rpoN) modulation protein/ribosomal protein S30EA Psyc_0204 114 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 71066654 Common - hypothetical protein Psyc_2100 35 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 71064996 Common - ABC transporter, ATPase subunit Psyc_0426 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 71064865 Common - hypothetical protein Psyc_0288 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 71065544 Nonpathogen - hypothetical protein Psyc_0984 1 None None None 71065974 Common - ABC transporter:AAA ATPase Psyc_1419 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 71064638 Common algH putative transcriptional regulator Psyc_0057 128 COG1678 COG1678, Putative transcriptional regulator Transcription 71065333 Common - hypothetical protein Psyc_0773 12 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 71064631 Common - probable transcriptional regulator, LysR family Psyc_0050 154 COG0583 LysR, Transcriptional regulator Transcription 71066124 Common - hypothetical protein Psyc_1569 141 COG1354 COG1354, Uncharacterized conserved protein Function unknown 71064755 Common - hypothetical protein Psyc_0175 18 None None None 71065695 Common - hypothetical protein Psyc_1137 61 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 71066479 Common - D-tyrosyl-tRNA deacylase Psyc_1924 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 71065163 Common nuoN NADH dehydrogenase I, subunit N Psyc_0596 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 71064629 Common - hypothetical protein Psyc_0048 64 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 71065827 Common algW probable serine protease Psyc_1270 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 71065675 Common prpD 2-methylcitrate dehydratase Psyc_1117 56 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 71065203 Common - transposase OrfB Psyc_0637 119 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065246 Common pilF possible type 4 fimbrial biogenesis protein Psyc_0680 76 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 71066314 Nonpathogen - hypothetical protein Psyc_1759 1 None None None 71065303 Common - hypothetical protein Psyc_0742 28 COG4852 COG4852, Predicted membrane protein Function unknown 71065021 Common - hypothetical protein Psyc_0451 5 None None None 71065369 Common gabT probable 4-aminobutyrate aminotransferase Psyc_0809 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 71066453 Nonpathogen - hypothetical protein Psyc_1898 1 None None None 71065987 Common metG methionyl-tRNA synthetase Psyc_1432 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065852 Common lipB probable biotin/lipoate A/B protein ligase family Psyc_1295 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 71065596 Common serC phosphoserine aminotransferase Psyc_1036 114 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 71065411 Common - possible thioesterase protein Psyc_0851 37 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 71065845 Common - possible AFG1-like ATPase protein Psyc_1288 102 COG1485 COG1485, Predicted ATPase General function prediction only 71066486 Common - possible metal dependent phosphohydrolase Psyc_1931 37 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 71065104 Common - transposase, mutator family Psyc_0534 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064690 Common pgi glucose-6-phosphate isomerase Psyc_0109 187 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 71065542 Common - probable phage-related protein Psyc_0982 19 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 71065064 Common rplV 50S ribosomal protein L22 Psyc_0494 221 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 71065595 Nonpathogen - hypothetical protein Psyc_1035 1 None None None 71066667 Common - probable Lipolytic enzyme, G-D-S-L family protein Psyc_2113 115 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 71066045 Common - transposase, IS4 family relatedTransposase, IS4 family relatedTransposase, IS4 family relatedTransposase, IS4 family related Psyc_1490 27 None None None 71066389 Common radC probable DNA repair protein RadC Psyc_1834 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 71066632 Nonpathogen - hypothetical protein Psyc_2078 2 None None None 71066416 Common bioB putative biotin synthase Psyc_1861 180 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 71066154 Common - ABC drug efflux transporter, fused ATPase and inner mebrane subunits Psyc_1599 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 71065343 Nonpathogen - hypothetical protein Psyc_0783 1 None None None 71065650 Common - hypothetical protein Psyc_1092 48 COG3174 COG3174, Predicted membrane protein Function unknown 71064856 Common - hypothetical protein Psyc_0279 3 None None None 71065495 Common - putative methylated-DNA-(protein)-cysteine S-methyltransferase Psyc_0935 215 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 71066222 Common trpE probable anthranilate synthase component I Psyc_1667 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 71065880 Common - hypothetical protein Psyc_1323 22 COG2378 COG2378, Predicted transcriptional regulator Transcription 71064979 Common - hypothetical protein Psyc_0405 67 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 71065353 Common - hypothetical protein Psyc_0793 183 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 71066640 Common - transposase, IS4 family related Psyc_2086 27 None None None 71066398 Common - possible universal stress protein family Psyc_1843 28 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 71065113 Common - transposase, IS4 family related Psyc_0545 27 None None None 71064911 Common recO probable DNA repair protein Psyc_0335 45 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 71065527 Common metF probable methylenetetrahydrofolate reductase Psyc_0967 138 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 71065175 Common narI nitrate reductase, gamma subunit Psyc_0608 58 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 71064622 Common sstT serine/threonine:Na+ symporter, SstT Psyc_0041 156 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 71065804 Common - hypothetical protein Psyc_1247 55 COG2850 COG2850, Uncharacterized conserved protein Function unknown 71064611 Common def putative polypeptide deformylase Psyc_0030 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 71066510 Common - hypothetical protein Psyc_1955 41 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 71064777 Common - probable acetate kinase Psyc_0197 161 COG0282 ackA, Acetate kinase Energy production and conversion 71065267 Common pgm phosphoglyceromutase Psyc_0701 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 71064929 Common - hypothetical protein Psyc_0353 82 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 71066040 Common menG ribonuclease activity regulator protein RraA Psyc_1485 87 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 71064741 Common hemL putative glutamate-1-semialdehyde-2,1-aminomutase Psyc_0161 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 71066366 Common hybC possible nickel-dependent hydrogenase b561-type cytochrome subunit Psyc_1811 92 COG3038 CybB, Cytochrome B561 Energy production and conversion 71065776 Nonpathogen - hypothetical protein Psyc_1219 1 None None None 71065928 Common - hypothetical protein Psyc_1373 6 None None None 71066127 Common rpmA 50S ribosomal protein L27 Psyc_1572 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 71065896 Common rplI 50S ribosomal protein L9 Psyc_1339 216 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 71066134 Common - probable IMP dehydrogenase/GMP reductase Psyc_1579 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71066133 Common hemB delta-aminolevulinic acid dehydratase Psyc_1578 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 71064676 Common - hypothetical protein Psyc_0095 12 None None None 71066047 Nonpathogen - hypothetical protein Psyc_1492 1 COG5416 COG5416, Uncharacterized integral membrane protein Function unknown 71064918 Common fpg probable formamidopyrimidine-DNA glycolase Psyc_0342 178 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 71066294 Common ftsJ 23S rRNA methylase, heat shock protein Psyc_1739 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 71065410 Common - transposase, IS3/IS911 family Psyc_0850 61 None None None 71066619 Common - probable glutamine amidotransferase, class-II protein Psyc_2065 62 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 71065376 Common - probable membrane-associated phospholipid phosphatase Psyc_0816 24 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 71065901 Common - possible D-amino acid oxidase Psyc_1346 139 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 71066235 Common efp elongation factor P (EF-P) Psyc_1680 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 71065420 Common - hypothetical protein Psyc_0860 5 None None None 71066160 Nonpathogen - hypothetical protein Psyc_1605 16 None None None 71064838 Common cc4 probable cytochrome C, c4 Psyc_0261 63 COG2863 COG2863, Cytochrome c553 Energy production and conversion 71066555 Common tatB twin-arginine translocation protein TatB Psyc_2001 99 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 71065579 Common - hypothetical protein Psyc_1019 6 None None None 71065430 Common - hypothetical protein Psyc_0870 2 None None None 71064593 Common - probable nuclear receptor binding factor related protein Psyc_0012 174 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 71064897 Common - hypothetical protein Psyc_0321 3 None None None 71064731 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase Psyc_0150 203 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 71064797 Common - probable carbonic anhydrase Psyc_0217 153 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 71065926 Common - hypothetical protein Psyc_1371 10 None None None 71064964 Common ftsK probable cell division FtsK protein Psyc_0389 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 71066610 Common - probable S-adenosyl-methyltransferase Psyc_2056 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 71064701 Common - hypothetical protein Psyc_0120 65 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 71065586 Common - hypothetical protein Psyc_1026 3 None None None 71064953 Nonpathogen - hypothetical protein Psyc_0377 1 None None None 71064713 Common - hypothetical protein Psyc_0132 58 COG2388 COG2388, Predicted acetyltransferase General function prediction only 71066289 Common - hypothetical protein Psyc_1734 7 COG3753 COG3753, Uncharacterized protein conserved in bacteria Function unknown 71066698 Common - putative inner membrane protein translocase component YidC Psyc_2144 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 71065457 Common - MFS drug efflux pump Psyc_0897 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065394 Nonpathogen - hypothetical protein Psyc_0834 1 None None None 71065682 Common - hypothetical protein Psyc_1124 2 None None None 71065768 Nonpathogen - hypothetical protein Psyc_1210 5 None None None 71066214 Common lon ATP-dependent protease La Psyc_1659 207 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 71064884 Common - possible pyridine nucleotide-disulphide oxidoreductase Psyc_0307 192 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 71064662 Common - hypothetical protein Psyc_0081 169 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 71065865 Common - hypothetical protein Psyc_1308 25 COG2030 MaoC, Acyl dehydratase Lipid metabolism 71065364 Common - putative transcription regulatory protein, IclR family Psyc_0804 96 COG1414 IclR, Transcriptional regulator Transcription 71066085 Common - putative membrane-associated zinc metalloprotease Psyc_1530 212 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 71065257 Common - possible membrane-bound lytic murein transglycosylase Psyc_0691 104 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 71065441 Common - putative type I site specific deoxyribonuclease HsdR Psyc_0881 133 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 71065689 Common - hypothetical protein Psyc_1131 3 None None None 71065563 Common - putative phagehead morphogenesis protein, SPP1 gp7 Psyc_1003 28 COG2369 COG2369, Uncharacterized protein, homolog of phage Mu protein gp30 Function unknown 71065978 Common sspA possible stringent starvation protein A Psyc_1423 65 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71065486 Common - putative ABC transporter, ATPase subunit Psyc_0926 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 71066260 Common bacA possible bacitracin resistance protein BacA, undecaprenol kinase Psyc_1705 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 71065124 Common pntA probable NAD(P) transhydrogenase, alpha subunit Psyc_0556 117 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 71065882 Common - probable potassium channel, VIC family Psyc_1325 110 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 71065482 Common kpsF probable sugar isomerase Psyc_0922 173 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 71066402 Common - hypothetical protein Psyc_1847 79 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 71065161 Common nuoL NADH dehydrogenase subunit L Psyc_0594 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 71064973 Common - hypothetical protein Psyc_0399 21 COG4338 COG4338, Uncharacterized protein conserved in bacteria Function unknown 71065383 Common clpB putative chaperonin clpA/B Psyc_0823 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 71064820 Common - hypothetical protein Psyc_0242 7 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 71066600 Common - hypothetical protein Psyc_2046 3 None None None 71066201 Nonpathogen - hypothetical protein Psyc_1646 1 None None None 71065932 Common - hypothetical protein Psyc_1377 33 COG1479 COG1479, Uncharacterized conserved protein Function unknown 71066425 Common cof possible class II-B haloacid dehalogenase (Cof subfamily) Psyc_1870 80 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 71064813 Common - possible pilus assembly protein PilW Psyc_0235 6 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 71065540 Common - probable C-5 cytosine-specific DNA methylase Psyc_0980 64 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 71064845 Common - hypothetical protein Psyc_0268 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 71064834 Common rlu putative pseudouridine synthase Psyc_0257 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 71064999 Common proS prolyl-tRNA synthetase Psyc_0429 245 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71066022 Common - heavy metal efflux P-type ATPase Psyc_1467 231 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 71066098 Common gyrA putative DNA gyrase, subunit A Psyc_1543 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 71065919 Common - probable glycerophosphoryl diester phosphodiesterase Psyc_1364 143 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 71065786 Common leuA 2-isopropylmalate synthase Psyc_1229 210 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 71064770 Common - hypothetical protein Psyc_0190 20 None None None 71066243 Common - putative transposase OrfA, IS3/IS911family Psyc_1688 62 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064965 Common - hypothetical protein Psyc_0390 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 71066026 Common fis probable Fis-type transcriptional activator Psyc_1471 98 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 71065635 Common - putative bacterioferritin-associated ferredoxin Psyc_1076 11 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 71065771 Common rfbA glucose-1-phosphate thymidylyltransferase Psyc_1214 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 71066621 Common thrB homoserine kinase Psyc_2067 59 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 71065026 Nonpathogen - hypothetical protein Psyc_0456 1 None None None 71065609 Common hrpA probable ATP dependent DNA/RNA helicase Psyc_1049 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 71066375 Common - putative two component response regulator Psyc_1820 213 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71065292 Common - small multidrug efflux pump, DMT superfamily Psyc_0731 136 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 71065519 Common dnaB putative DnaB helicase Psyc_0959 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 71064747 Common thiD probable phosphomethylpyrimidine kinase Psyc_0167 220 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 71065661 Common - hypothetical protein Psyc_1103 41 COG4336 COG4336, Uncharacterized conserved protein Function unknown 71066183 Common - possible adenylate cyclase Psyc_1628 55 COG3025 COG3025, Uncharacterized conserved protein Function unknown 71065325 Common - probable tellurium resistance protein Psyc_0765 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 71065992 Common - ABC transporter, ATPase subunit Psyc_1437 249 COG1101 PhnK, ABC-type uncharacterized transport system, ATPase component General function prediction only 71066218 Common exbB MotA/TolQ/ExbB proton channel Psyc_1663 147 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 71066016 Common lysC aspartate kinase Psyc_1461 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 71066500 Common - hypothetical protein Psyc_1945 9 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 71066520 Common - hypothetical protein Psyc_1966 13 COG3663 Mug, G:T/U mismatch-specific DNA glycosylase DNA replication, recombination, and repair 71065655 Common - metal Ion (Mn2+/Fe2+) transporter, Nramp Family Psyc_1097 39 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 71065280 Common - hypothetical protein Psyc_0714 12 None None None 71065018 Common - hypothetical protein Psyc_0448 6 None None None 71064612 Common - hypothetical protein Psyc_0031 94 COG2261 COG2261, Predicted membrane protein Function unknown 71065976 Common - cytochrome b, b6 subunit Psyc_1421 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 71064859 Common prc possible carboxyl-terminal protease Psyc_0282 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 71066337 Common - putative heme-hemopexin utilization protein B Psyc_1782 68 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 71066685 Common bioC possible biotin synthesis protein Psyc_2131 35 COG0500 SmtA, SAM-dependent methyltransferases Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71065069 Common rplN 50S ribosomal protein L14 Psyc_0499 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 71064683 Common kgd alpha-ketoglutarate decarboxylase Psyc_0102 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 71065057 Common - putative ribonuclease EG Psyc_0487 184 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 71066347 Common - sulphate transporter, SulP family Psyc_1792 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 71065407 Common - probable Flavin reductase protein Psyc_0847 108 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 71064908 Common - hypothetical protein Psyc_0332 3 None None None 71065233 Common - probable glycosyl transferase, group 1 Psyc_0667 64 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 71065438 Common - probable type I restriction modification system methylase Psyc_0878 77 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 71065136 Common - hypothetical protein Psyc_0568 49 None None None 71066167 Common - aldehyde dehydrogenase family protein, NAD dependent Psyc_1612 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 71066577 Common atpC ATP synthase F1, epsilon subunit Psyc_2023 185 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 71064947 Common - hypothetical protein Psyc_0371 3 None None None 71066515 Common - hypothetical protein Psyc_1961 10 None None None 71064651 Common rbfA putative ribosome-binding factor A Psyc_0070 165 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 71064652 Common truB probable tRNA pseudouridine synthase B Psyc_0071 244 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 71065766 Common - hypothetical protein Psyc_1208 2 None None None 71065942 Common - NADP-dependent malic enzyme Psyc_1387 202 COG0281 SfcA, Malic enzyme Energy production and conversion 71065741 Common rarD DMT superfamily efflux pump, RarD Psyc_1183 107 COG2962 RarD, Predicted permeases General function prediction only 71066109 Common - probable Rhodanese-like sulfurtransferase protein Psyc_1554 117 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 71065216 Common - putative UDP-glucose/GDP-mannose dehydrogenase Psyc_0650 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 71066333 Common - transposase OrfB Psyc_1778 122 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066587 Common - transcriptional regulator, probable FUR family Psyc_2033 96 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 71065154 Common nuoE NADH dehydrogenase subunit E Psyc_0587 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 71065707 Common mdcY putative transcriptional regulator protein, GntR family Psyc_1149 142 COG1802 GntR, Transcriptional regulators Transcription 71066273 Common - hypothetical protein Psyc_1718 12 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 71065011 Nonpathogen - hypothetical protein Psyc_0441 6 None None None 71066307 Common gshB glutathione synthetase Psyc_1752 124 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 71065114 Common - Na+/H+ antiporter, CPA1 family Psyc_0546 160 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 71065429 Common - possible AAA ATPase family protein Psyc_0869 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 71065625 Common - possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase Psyc_1066 92 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 71064762 Common nemA N-ethylmaleimide reductase, FMN-linked Psyc_0182 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 71064878 Common - hypothetical protein Psyc_0301 19 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 71065564 Common - possible phage Peptidase U7 Psyc_1004 56 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 71065872 Common lpxK probable tetraacyldisaccharide-1-P 4'-kinase Psyc_1315 129 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 71066534 Common - probable dienelactone hydrolase Psyc_1980 111 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 71065461 Common - putative acyl-CoA dehydrogenase Psyc_0901 167 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71065287 Nonpathogen - hypothetical protein Psyc_0721 1 None None None 71064823 Common - ferredoxin, 4Fe-Fs binding domain Psyc_0246 140 COG1146 COG1146, Ferredoxin Energy production and conversion 71064724 Common dpnC putative type II restriction endonuclease DpnI Psyc_0143 5 None None None 71066149 Nonpathogen - hypothetical protein Psyc_1594 1 None None None 71065468 Common - outer membrane protein, OmpA/MotB family Psyc_0908 154 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 71065503 Common rhlB putative ATP-dependent RNA helicase Psyc_0943 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 71066395 Common - possible MutT/nudix family protein Psyc_1840 117 None None None 71064902 Common coaD putative pantetheine-phosphate adenylyltransferase Psyc_0326 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 71065806 Common - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase Psyc_1249 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 71065269 Common - putative transcriptional regulator, LuxR family Psyc_0703 207 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 71064796 Common metR putative transcriptional regulator, LysR family Psyc_0216 158 COG0583 LysR, Transcriptional regulator Transcription 71066530 Common - possible apolipoprotein N-acyltransferase Psyc_1976 167 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 71066193 Common merP putative MerP, periplasmic heavy metal binding/chaperone protein Psyc_1638 36 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 71065922 Common maeB malic enzyme Psyc_1367 215 COG0281 SfcA, Malic enzyme Energy production and conversion 71064674 Common ribB putative 3,4-dihydroxy-2-butanone 4-phosphate synthase:GTP cyclohydrolase II Psyc_0093 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 71065393 Common - bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit Psyc_0833 212 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 71065652 Common - transcriptional regulatory protein, LysR family Psyc_1094 104 COG0583 LysR, Transcriptional regulator Transcription 71064937 Common - hypothetical protein Psyc_0361 30 None None None 71066368 Common - putative hybrid two-component sensor and regulatory protein Psyc_1813 224 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 71065116 Common - probable Ribonuclease BN Psyc_0548 118 COG1295 Rbn, Predicted membrane protein Function unknown 71065670 Common - aconitate hydratase Psyc_1112 223 COG1048 AcnA, Aconitase A Energy production and conversion 71065003 Common trpA probable tryptophan synthase, alpha chain Psyc_0433 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 71066100 Common - ABC iron transporter, ATPase subunit Psyc_1545 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 71065678 Common - hypothetical protein Psyc_1120 17 COG0486 ThdF, Predicted GTPase General function prediction only 71066049 Common rpsA 30S ribosomal protein S1 Psyc_1494 216 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 71066177 Common - probable DnaA family protein Psyc_1622 106 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 71066311 Common - hypothetical protein Psyc_1756 19 None None None 71065891 Common - hypothetical protein Psyc_1334 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 71066132 Common oprM outer membrane efflux protein, OprM Psyc_1577 144 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 71065898 Common - probable glycerate kinase Psyc_1342 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 71066139 Nonpathogen - hypothetical protein Psyc_1584 3 None None None 71064987 Common - hypothetical protein Psyc_0417 54 None None None 71064867 Common glyA putative glycine hydroxymethyltransferase Psyc_0290 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 71065384 Common - hypothetical protein Psyc_0824 5 None None None 71065402 Common - probable glutathione S-transferase Psyc_0842 59 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71066508 Nonpathogen - hypothetical protein Psyc_1953 1 None None None 71066502 Nonpathogen - hypothetical protein Psyc_1947 1 None None None 71066484 Common pstB ABC phosphate transporter, ATPase subunit PstB Psyc_1929 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 71066669 Common - ABC efflux transporter, fused inner membrane subunits Psyc_2115 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 71064767 Common purL phosphoribosylformylglycinamidine synthase Psyc_0187 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 71066028 Common - possible PpiC-type peptidyl-prolyl cis-trans isomerase Psyc_1473 130 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 71064854 Common - hypothetical protein Psyc_0277 32 None None None 71064930 Common - hypothetical protein Psyc_0354 2 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 71066268 Nonpathogen - hypothetical protein Psyc_1713 1 None None None 71066661 Common nqrD Na(+)-translocating NADH-quinone reductase subunit D Psyc_2107 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 71065889 Common - putative glycerol kinase Psyc_1332 178 COG0554 GlpK, Glycerol kinase Energy production and conversion 71065532 Common trpC probable indole-3-glycerol phosphate synthase Psyc_0972 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 71065305 Common uvrB excinuclease ABC subunit B Psyc_0744 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 71066387 Common - hypothetical protein Psyc_1832 10 COG0730 COG0730, Predicted permeases General function prediction only 71066097 Common - probable glutathione S-transferase Psyc_1542 80 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71065715 Common - hypothetical protein Psyc_1157 51 COG3222 COG3222, Uncharacterized protein conserved in bacteria Function unknown 71065850 Common pncB nicotinate phosphoribosyltransferase Psyc_1293 105 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 71065628 Common cysN sulphate adenyltransferase (ATP-sulfurylase), subunit 1 Psyc_1069 64 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 71065493 Common - transposase, IS4 family related Psyc_0933 27 None None None 71065067 Common rpmC 50S ribosomal protein L29 Psyc_0497 83 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 71065520 Common pdxA probable pyridoxal phosphate biosynthetic protein Psyc_0960 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 71066007 Common - IS1329/IS3/IS911 transposase Psyc_1452 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066455 Common pabB possible p-aminobenzoate synthase, component I Psyc_1900 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 71066523 Common - hypothetical protein Psyc_1969 35 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 71064915 Common - putative regulatory protein TypA or elongation factor Tu Psyc_0339 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 71065866 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase Psyc_1309 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71065558 Nonpathogen - hypothetical protein Psyc_0998 3 None None None 71065170 Common narX signal transduction histidine kinase sensor Psyc_0603 143 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 71066219 Common tonB TonB/TolA energy transducing protein Psyc_1664 8 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 71066224 Nonpathogen - hypothetical protein Psyc_1669 1 None None None 71065723 Common - hypothetical protein Psyc_1165 24 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 71064727 Common - Na(+):H(+) antiporter, CPA1 family Psyc_0146 129 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 71065732 Common - probable transcriptional regulatory protein, iclR family Psyc_1174 98 COG1414 IclR, Transcriptional regulator Transcription 71065106 Common - probable transposase orfAB Psyc_0537 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065345 Common - possible competence protein, ComEC Psyc_0785 120 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 71066340 Nonpathogen - hypothetical protein Psyc_1785 1 COG3094 COG3094, Uncharacterized protein conserved in bacteria Function unknown 71065062 Common rplB 50S ribosomal protein L2 Psyc_0492 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 71064971 Common map methionine aminopeptidase, type 1 Psyc_0396 246 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 71064744 Common - hypothetical protein Psyc_0164 184 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 71065451 Common - possible transcriptional regulator, TetR family Psyc_0891 15 COG1309 AcrR, Transcriptional regulator Transcription 71066563 Common - hypothetical protein Psyc_2009 47 COG3332 COG3332, Uncharacterized conserved protein Function unknown 71066316 Common ribF probable bifunctional enzyme - riboflavin kinase/FAD synthetase Psyc_1761 211 COG0196 RibF, FAD synthase Coenzyme metabolism 71065029 Nonpathogen - possible phage head-tail adaptor protein Psyc_0459 1 COG5614 COG5614, Bacteriophage head-tail adaptor General function prediction only 71066595 Common - sulphate transporter, SulP family Psyc_2041 176 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 71065931 Common - hypothetical protein Psyc_1376 67 COG1479 COG1479, Uncharacterized conserved protein Function unknown 71066441 Common rpoC DNA-directed RNA polymerase subunit beta' Psyc_1886 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 71064874 Common - ABC basic amino acid transporter, inner membrane subunit Psyc_0297 173 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 71066208 Common glcA glycolate/L-lactate:H+ symporter Psyc_1653 97 COG1620 LldP, L-lactate permease Energy production and conversion 71064809 Common pldA probable outer membrane phospholipase A Psyc_0231 52 COG2829 PldA, Outer membrane phospholipase A Cell envelope biogenesis, outer membrane 71065389 Common nth endonuclease III Psyc_0829 238 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 71066660 Common nqrC Na(+)-translocating NADH-quinone reductase subunit C Psyc_2106 47 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 71065980 Common dcd deoxycytidine triphosphate deaminase Psyc_1425 148 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 71065536 Common - hypothetical protein Psyc_0976 2 None None None 71066683 Common - possible OmpA family protein Psyc_2129 10 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 71065662 Nonpathogen - hypothetical protein Psyc_1104 1 None None None 71065989 Common - ABC transporter, substrate-binding protein Psyc_1434 55 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 71064786 Common - hypothetical protein Psyc_0206 66 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 71065074 Common rplF 50S ribosomal protein L6 Psyc_0504 229 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 71065250 Common - hypothetical protein Psyc_0684 44 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 71066497 Common clpX ATP-dependent protease ATP-binding subunit Psyc_1942 222 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 71065278 Common - hypothetical protein Psyc_0712 5 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 71065440 Nonpathogen - hypothetical protein Psyc_0880 1 None None None 71065506 Nonpathogen - hypothetical protein Psyc_0946 6 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 71065201 Common - possible multiple antibiotic resistance (MarC)-related proteins Psyc_0635 155 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 71066291 Common - hypothetical protein Psyc_1736 30 COG2938 COG2938, Uncharacterized conserved protein Function unknown 71066433 Common aroK probable Shikimate kinase Psyc_1878 202 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 71065180 Nonpathogen - hypothetical protein Psyc_0613 1 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 71066117 Common - hypothetical protein Psyc_1562 13 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 71064757 Common agxT possible serine-pyruvate aminotransferase Psyc_0177 122 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 71065960 Common - hypothetical protein Psyc_1405 14 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 71065612 Common prfA peptide chain release factor 1 Psyc_1053 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 71065657 Common - possible allophanate hydrolase subunit 2, related to Urea amidolyase Psyc_1099 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 71065234 Common wbpS probable asparagine synthase, glutamine-hydrolyzing Psyc_0668 149 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 71066077 Common - hypothetical protein Psyc_1522 23 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 71066481 Common pstS ABC phosphate transporter, periplasmic solute binding subunit PstS Psyc_1926 128 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 71066652 Common thrS threonyl-tRNA synthetase Psyc_2098 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71066320 Common - possible soluble lytic murein transglycosylase Psyc_1765 151 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 71064635 Common - hypothetical protein Psyc_0054 97 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 71066318 Common mdh malate dehydrogenase Psyc_1763 108 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 71065706 Common madL malonate/sodium symporter, MadL subunit Psyc_1148 11 None None None 71066279 Common rpoZ RNA polymerase, omega subunit Psyc_1724 119 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 71065647 Common - hypothetical protein Psyc_1089 58 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 71065593 Nonpathogen - hypothetical protein Psyc_1033 1 None None None 71065951 Common - probable Haloacid dehalogenase, type II Psyc_1396 68 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 71064636 Nonpathogen - hypothetical protein Psyc_0055 1 None None None 71065462 Common - enoyl-CoA hydratase Psyc_0902 185 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 71065189 Common - probable DSBA oxidoreductase Psyc_0622 86 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 71066182 Common aceA isocitrate lyase Psyc_1627 118 COG2224 AceA, Isocitrate lyase Energy production and conversion 71066068 Common - hypothetical protein Psyc_1513 2 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 71064613 Common mpl putative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Psyc_0032 204 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 71065198 Common nadA quinolinate synthetase Psyc_0632 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 71066173 Common serS seryl-tRNA synthetase Psyc_1618 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065314 Nonpathogen - hypothetical protein Psyc_0754 1 None None None 71065183 Common moaE probable molybdopterin converting factor, large subunit Psyc_0616 152 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 71066258 Nonpathogen - hypothetical protein Psyc_1703 1 None None None 71065913 Common pdxH putative pyridoxamine 5'-phosphate oxidase Psyc_1358 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 71066380 Common ccmE cytochrome c-type biogenesis protein CcmE Psyc_1825 92 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 71066361 Nonpathogen - hypothetical protein Psyc_1806 1 None None None 71066103 Common - hypothetical protein Psyc_1548 21 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 71064906 Common lepA GTP-binding protein LepA Psyc_0330 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 71065166 Common - probable transposase IS30 family Psyc_0599 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064895 Common zipA possible cell division protein Psyc_0319 35 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 71066286 Common - probable S-adenosylmethionine-dependent methyltransferase Psyc_1731 176 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 71065775 Common - possible DsrE-like protein Psyc_1218 37 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 71064695 Common - hypothetical protein Psyc_0114 179 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 71065814 Common rluD putative pseudouridylate synthase, 23S rRNA specific Psyc_1257 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 71066647 Common - hypothetical protein Psyc_2093 50 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 71066065 Common - hypothetical protein Psyc_1510 100 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 71065374 Common carB carbamoyl-phosphate synthase, large subunit Psyc_0814 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 71065969 Common lysR probable transcriptional regulator, LysR family Psyc_1414 188 COG0583 LysR, Transcriptional regulator Transcription 71064641 Common - probable RNA methyltransferase, TrmH family, group 3 Psyc_0060 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 71064654 Common rpsO 30S ribosomal protein S15 Psyc_0073 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 71066005 Common acxC possible Acetone carboxylase gamma subunit Psyc_1450 17 COG4647 AcxC, Acetone carboxylase, gamma subunit Secondary metabolites biosynthesis, transport, and catabolism 71065837 Common - putative branched chain amino acid efflux pump, LivE family, large subunit Psyc_1280 103 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 71066251 Common - hypothetical protein Psyc_1696 78 COG0585 COG0585, Uncharacterized conserved protein Function unknown 71065247 Common - hypothetical protein Psyc_0681 43 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 71064711 Common - hypothetical protein Psyc_0130 2 None None None 71066195 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase Psyc_1640 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 71064879 Common - possible heat shock protein, Hsp33 Psyc_0302 134 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 71066327 Nonpathogen - hypothetical protein Psyc_1772 1 None None None 71066518 Nonpathogen - TRAP-T family transporter, small inner membrane subunit Psyc_1964 3 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 71065414 Common - TRAP family transporter, periplasmic substrate binding subunit Psyc_0854 116 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 71065645 Common - possible DNA-binding protein Psyc_1087 62 COG3943 COG3943, Virulence protein General function prediction only 71066042 Common rpsT 30S ribosomal protein S20 Psyc_1487 126 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 71064719 Common - hypothetical protein Psyc_0138 22 COG1289 COG1289, Predicted membrane protein Function unknown 71065151 Common nuoA NADH dehydrogenase I, A subunit Psyc_0584 114 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 71066570 Common rplS 50S ribosomal protein L19 Psyc_2016 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 71065122 Common - hypothetical protein Psyc_0554 80 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 71065322 Common - hypothetical protein Psyc_0762 45 COG2013 COG2013, Uncharacterized conserved protein Function unknown 71066017 Common csrA carbon storage regulator Psyc_1462 82 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 71066506 Common - hypothetical protein Psyc_1951 12 COG4446 COG4446, Uncharacterized protein conserved in bacteria Function unknown 71066675 Common hisB imidazoleglycerol-phosphate dehydratase Psyc_2121 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 71065337 Common - cytochrome C oxidase, mono-heme subunit Psyc_0777 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 71066180 Common purN probable phosphoribosylglycinamide formyltransferase Psyc_1625 222 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 71064825 Common secA preprotein translocase subunit SecA Psyc_0248 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 71064768 Common - hypothetical protein Psyc_0188 15 COG3428 COG3428, Predicted membrane protein Function unknown 71066553 Common hisI putative phosphoribosyl (-ATP, -AMP) pyrophosphohydrolase/cyclohydrolase Psyc_1999 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 71065810 Common tolB probable TolB periplasmic receptor Psyc_1253 163 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 71066147 Common - hypothetical protein Psyc_1592 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 71065193 Common - putative PhoH-like protein, predicted ATPase Psyc_0627 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 71065904 Nonpathogen - hypothetical protein Psyc_1349 1 None None None 71066305 Common murC putative UDP-N-acetylmuramate--alanine ligase Psyc_1750 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 71065131 Common - hypothetical protein Psyc_0563 84 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 71066393 Common nhaA Na+/H+ antiporter, NhaA Psyc_1838 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 71065473 Common - probable pyridoxal-dependent decarboxylase Psyc_0913 58 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 71065293 Common - hypothetical protein Psyc_0732 8 None None None 71066623 Common ribH putative riboflavin synthase, beta subunit Psyc_2069 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 71065009 Nonpathogen - hypothetical protein Psyc_0439 1 None None None 71066129 Common ispB probable octaprenyl-diphosphate synthase Psyc_1574 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 71066644 Common - possible peptidyl-prolyl isomerase Psyc_2090 138 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 71065830 Common - probable membrane-bound lytic murein transglycosylase D precursor Psyc_1273 163 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 71065043 Nonpathogen - hypothetical protein Psyc_0473 1 None None None 71065700 Common mdcE putative malonate decarboxylase, subunit E Psyc_1142 5 None None None 71065138 Common katE putative catalase Psyc_0570 126 COG0753 KatE, Catalase Inorganic ion transport and metabolism 71064872 Common - ABC basic amino acid transporter, periplasmic binding protein Psyc_0295 172 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 71066593 Common ftsW cell division protein FtsW Psyc_2039 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 71065743 Common hisC histidinol-phosphate aminotransferase Psyc_1185 232 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 71066013 Common - transposase, orfA, IS3/IS911 family Psyc_1458 25 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065053 Common mreB putative rod shape-determining protein MreB Psyc_0483 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 71065821 Common - hypothetical protein Psyc_1264 5 None None None 71066631 Common - probable signal transduction histidine kinase sensor Psyc_2077 182 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71065570 Common - hypothetical protein Psyc_1010 2 None None None 71065469 Common pepN probable aminopeptidase N Psyc_0909 158 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 71066233 Common - possible diguanylate cyclase and phosphodiesterase A Psyc_1678 153 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 71065577 Common - hypothetical protein Psyc_1017 6 None None None 71065016 Common - probable phage minor tail protein Psyc_0446 13 COG4672 gp18, Phage-related protein Function unknown 71064615 Common dsbB possible disulfide bond formation protein Psyc_0034 58 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 71065463 Common - enoyl-CoA hydratase/isomerase family protein Psyc_0903 133 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 71065328 Common - dihydrolipoamide dehydrogenase Psyc_0768 237 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 71066356 Common - hypothetical protein Psyc_1801 24 COG3490 COG3490, Uncharacterized protein conserved in bacteria Function unknown 71065754 Common sdaA putative serine dehydratase, single chain form Psyc_1196 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 71065859 Common - probable histidine triad (HIT) protein Psyc_1302 233 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 71065426 Common - hypothetical protein Psyc_0866 21 COG5377 COG5377, Phage-related protein, predicted endonuclease DNA replication, recombination, and repair 71065404 Common - hypothetical protein Psyc_0844 3 None None None 71066339 Common bolA possible stress-induced morphogen BolA Psyc_1784 80 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 71066633 Nonpathogen - hypothetical protein Psyc_2079 1 None None None 71065956 Common - possible permease transmembrane protein Psyc_1401 13 COG3619 COG3619, Predicted membrane protein Function unknown 71065095 Common - probable YjeF-related protein Psyc_0525 220 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 71064822 Nonpathogen - hypothetical protein Psyc_0245 1 None None None 71065351 Common - probable phospholipase D Psyc_0791 141 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 71064949 Common - hypothetical protein Psyc_0373 94 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 71065800 Common ispF putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Psyc_1243 187 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 71065870 Common holB possible DNA polymerase III, delta' subunit Psyc_1313 200 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 71066415 Common - hypothetical protein Psyc_1860 5 None None None 71065386 Common - choline/glycine betaine transporter, BCCT family Psyc_0826 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 71065760 Common sohB predicted inner membrane peptidase Psyc_1202 185 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 71064888 Common - putative acyl-CoA carboxylase alpha chain protein Psyc_0311 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 71065607 Nonpathogen - hypothetical protein Psyc_1047 1 None None None 71065484 Nonpathogen - hypothetical protein Psyc_0924 1 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 71065088 Common - hypothetical protein Psyc_0518 2 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 71065156 Common nuoG NADH dehydrogenase subunit G Psyc_0589 189 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 71065480 Common miaA probable tRNA delta(2)-isopentylpyrophosphate Psyc_0920 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 71064990 Nonpathogen - hypothetical protein Psyc_0420 6 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 71066601 Common - probable DNA/RNA non-specific endonuclease (Mg-dependent) Psyc_2047 40 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 71064776 Common - phosphate acetyltransferase Psyc_0196 163 COG0280 Pta, Phosphotransacetylase Energy production and conversion 71065090 Common fabD malonyl CoA-acyl carrier protein transacylase Psyc_0520 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 71064847 Common nadE putative NH3-dependent (glutamine-hydrolyzing) NAD(+) synthetase Psyc_0270 231 COG0171 NadE, NAD synthase Coenzyme metabolism 71065944 Common tdcB putative threonine dehydratase Psyc_1389 224 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 71064601 Common - hypothetical protein Psyc_0020 10 None None None 71064795 Nonpathogen - hypothetical protein Psyc_0215 1 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 71065031 Common - possible major phage capsid subunit precursor Psyc_0461 17 None None None 71065020 Common - possible LambdaSo, minor tail protein M Psyc_0450 11 COG4718 COG4718, Phage-related protein Function unknown 71065805 Common - hypothetical protein Psyc_1248 43 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 71064804 Common thiG thiazole synthase Psyc_0224 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 71065510 Common - probable heat shock RNA-binding protein Psyc_0950 105 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 71065105 Common - IS1329/IS3/IS911 transposase Psyc_0536 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065350 Common - metabolite MFS transporter, MHS family Psyc_0790 145 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065632 Common cysW ABC sulfate/thiosulfate transporter, inner membrane subunit CysW Psyc_1073 230 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 71065994 Common ttrS possible Signal transduction Histidine kinase sensor Psyc_1439 80 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 71065121 Common groEL chaperonin GroEL Psyc_0553 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 71065561 Common - phage terminase, large subunit, PBSX family: Psyc_1001 28 COG1783 XtmB, Phage terminase large subunit General function prediction only 71064739 Common - hypothetical protein Psyc_0159 67 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 71064596 Common - hypothetical protein Psyc_0015 14 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 71066532 Common - hypothetical protein Psyc_1978 16 COG3029 FrdC, Fumarate reductase subunit C Energy production and conversion 71065693 Common - uncharacterized FAD-dependent dehydrogenase Psyc_1135 83 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 71064844 Common pilT pilus retraction protein PilT Psyc_0267 220 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 71065447 Common - putative NAD(P)/FAD ferrodoxin Psyc_0887 104 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 71064956 Common prfC peptide chain release factor 3 Psyc_0380 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 71065580 Nonpathogen - hypothetical protein Psyc_1020 1 None None None 71066140 Nonpathogen - hypothetical protein Psyc_1585 7 None None None 71064852 Common purK probable phosphoribosylaminoimidazole carboxylase, ATPase subunit Psyc_0275 196 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 71065680 Common - hypothetical protein Psyc_1122 13 None None None 71065223 Common - probable polysaccharide biosynthesis protein Psyc_0657 33 COG3980 spsG, Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase Cell envelope biogenesis, outer membrane 71065748 Common rubA putative rubredoxin protein Psyc_1190 118 COG1773 COG1773, Rubredoxin Energy production and conversion 71065391 Common - probable NUDIX hydrolase Psyc_0831 98 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 71065879 Common - hypothetical protein Psyc_1322 100 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 71065229 Common - possible alpha-2,3-sialyltransferase Psyc_0663 5 None None None 71066558 Common dus possible tRNA-dihydrouridine synthase Psyc_2004 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 71064708 Common - hypothetical protein Psyc_0127 202 COG2183 Tex, Transcriptional accessory protein Transcription 71064925 Common - MFS multi-drug efflux pump, Bcr/CflA subfamily Psyc_0349 203 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065174 Common narJ nitrate reductase, delta subunit Psyc_0607 48 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 71065276 Common ruvB Holliday junction DNA helicase B Psyc_0710 217 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 71065546 Common - possible neutral zinc metallopeptidase Psyc_0986 5 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 71066087 Common cdsA probable phosphatidate cytidylyltransferase Psyc_1532 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 71065158 Common nuoI NADH dehydrogenase subunit I Psyc_0591 189 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 71064681 Common sdhA succinate dehydrogenase flavoprotein subunit Psyc_0100 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 71064703 Common - probable haloacid dehalogenase-like hydrolase Psyc_0122 196 COG0546 Gph, Predicted phosphatases General function prediction only 71064881 Common gltJ ABC glutamate/aspartate transporter, inner membrane subunit GltJ Psyc_0304 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 71064985 Common - transposase, IS4 family related Psyc_0414 27 None None None 71064668 Common - hypothetical protein Psyc_0087 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 71065868 Common - hypothetical protein Psyc_1311 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 71066525 Common anmK anhydro-N-acetylmuramic acid kinase Psyc_1971 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 71066406 Common - formate/nitrite transporter family (FNT) Psyc_1851 91 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 71064962 Common aat leucyl/phenylalanyl-tRNA--protein transferase Psyc_0387 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 71065708 Common - probable periplasmic protein, YceI family Psyc_1150 99 COG2353 COG2353, Uncharacterized conserved protein Function unknown 71065149 Common mgtE Mg/Co/Ni transporter MgtE Psyc_0582 155 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 71066695 Common ribD probable diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase Psyc_2141 219 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 71064608 Common - probable chaperone protein dnaJ Psyc_0027 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 71065282 Common - phosphate transporter, PiT family Psyc_0716 143 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 71066546 Common - probable neutral zinc metallopeptidase Psyc_1992 85 COG2321 COG2321, Predicted metalloprotease General function prediction only 71064839 Common - hypothetical protein Psyc_0262 2 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 71066083 Common lpxD probable UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD Psyc_1528 155 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 71066541 Common - probable D-isomer specific 2-hydroxyacid dehydrogenase Psyc_1987 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 71065416 Common - hypothetical protein Psyc_0856 30 None None None 71065659 Common - Acetyl-CoA carboxylase, biotin carboxylase Psyc_1101 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 71065491 Common - probable Insulinase-like peptidase, family M16 Psyc_0931 165 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 71064959 Common - hypothetical protein Psyc_0384 2 None None None 71065610 Common - DMT superfamily efflux pump Psyc_1051 28 COG2510 COG2510, Predicted membrane protein Function unknown 71065400 Common chrR probable anti-sigma factor, ChrR Psyc_0840 30 COG3806 ChrR, Transcriptional activator Transcription 71065110 Common pyrB aspartate carbamoyltransferase catalytic subunit Psyc_0542 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 71066152 Common - signal transduction Histidine kinase Psyc_1597 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71066638 Common - RND efflux membrane fusion protein Psyc_2084 97 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 71065531 Common - hypothetical protein Psyc_0971 77 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 71064737 Common - hypothetical protein Psyc_0157 16 None None None 71064913 Common - hypothetical protein Psyc_0337 3 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 71065687 Nonpathogen - hypothetical protein Psyc_1129 1 None None None 71066159 Common - D-cysteine desulfhydrase Psyc_1604 81 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 71064750 Common pth peptidyl-tRNA hydrolase Psyc_0170 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 71065207 Common - bactoprenol-linked glucose translocase (flippase) Psyc_0641 9 COG2246 COG2246, Predicted membrane protein Function unknown 71065037 Nonpathogen - hypothetical protein Psyc_0467 1 None None None 71066663 Common nqrF Na(+)-translocating NADH-quinone reductase subunit F Psyc_2109 154 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 71065145 Common - hypothetical protein Psyc_0577 93 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 71066568 Common - hypothetical protein Psyc_2014 9 None None None 71065377 Common - probable bacterial transferase Psyc_0817 206 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 71065041 Common - hypothetical protein Psyc_0471 5 COG4197 COG4197, Uncharacterized protein conserved in bacteria, prophage-related Function unknown 71066457 Common hisD histidinol dehydrogenase Psyc_1902 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 71066412 Common serB probable phosphoserine phosphatase Psyc_1857 174 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 71065060 Common rplD 50S ribosomal protein L4 Psyc_0490 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 71065101 Common cspA transcriptional regulator, CspA Psyc_0531 180 COG1278 CspC, Cold shock proteins Transcription 71065108 Common - probable tRNA/rRNA methyltransferase Psyc_0540 192 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 71064658 Common - hypothetical protein Psyc_0077 2 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 71064904 Common bioA putative adenosylmethionine--8-amino-7-oxononanoate aminotransferase Psyc_0328 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 71065307 Common - TRAP-T family transporter, periplasmic substrate binding subunit Psyc_0746 100 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 71065773 Common ilvE branched-chain amino acid aminotransferase Psyc_1216 218 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 71066299 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Psyc_1744 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 71064721 Nonpathogen - hypothetical protein Psyc_0140 1 None None None 71066059 Common obgE GTPase ObgE Psyc_1504 249 COG0536 Obg, Predicted GTPase General function prediction only 71065522 Common apaH diadenosine tetraphosphatase Psyc_0962 90 None None None 71066099 Common - possible methyltransferase Psyc_1544 31 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 71064900 Common - hypothetical protein Psyc_0324 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 71065857 Common - probable TIM-barrel protein, nifR3 family Psyc_1300 213 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 71065128 Common - hypothetical protein Psyc_0560 19 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 71064672 Nonpathogen - hypothetical protein Psyc_0091 1 None None None 71065470 Common aroF phospho-2-dehydro-3-heoxyheptonate aldolase Psyc_0910 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 71065924 Common - pteridine reductase Psyc_1369 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71064968 Common - hypothetical protein Psyc_0393 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 71066175 Common - putative DNA-binding protein, Dps Psyc_1620 134 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 71065664 Common - hypothetical protein Psyc_1106 20 None None None 71065179 Common moaB2 molybdenum cofactor biosynthesis protein Psyc_0612 181 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 71066572 Common rimM probable 16S rRNA processing protein Psyc_2018 165 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 71065808 Common tolR probable Biopolymer transport protein (TolR) Psyc_1251 130 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 71065841 Common pyrD dihydroorotate dehydrogenase 2 Psyc_1284 222 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 71065833 Common yajC preprotein translocase, subunit YajC Psyc_1276 163 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 71066313 Common mviN putative virulence factor, mviN; MOP flippase superfamily Psyc_1758 193 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 71064862 Common - hypothetical protein Psyc_0285 48 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 71065271 Common thiE possible thiamine monophosphate synthase Psyc_0705 148 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 71066130 Common - RND membrane fusion protein AcrA Psyc_1575 156 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 71065954 Common - putative 3-hydroxyacyl-CoA dehydrogenase, NAD binding Psyc_1399 163 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 71066285 Nonpathogen - hypothetical protein Psyc_1730 1 None None None 71064981 Common - LemA family protein Psyc_0409 132 COG1704 LemA, Uncharacterized conserved protein Function unknown 71065672 Common - hypothetical protein Psyc_1114 14 None None None 71065893 Common - hypothetical protein Psyc_1336 3 COG1714 COG1714, Predicted membrane protein/domain Function unknown 71064802 Common suhB inositol monophosphatase Psyc_0222 211 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 71065259 Common ppiB peptidyl-prolyl cis-trans isomerase, cyclophilin type Psyc_0693 201 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 71066115 Common dsbE probable periplasmic protein thiol:disulfide oxidoreductase DsbE Psyc_1560 115 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 71066277 Common lytB hydroxymethylbutenyl pyrophosphate reductase Psyc_1722 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 71064633 Common xerD probable phage integrase Psyc_0052 229 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 71064625 Common - probable isochorismatase hydrolase Psyc_0044 96 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 71065946 Common ocd possible ornithine cyclodeaminase Psyc_1391 86 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 71065692 Common - hypothetical protein Psyc_1134 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 71066561 Common mutT dinucleoside polyphosphate hydrolase Psyc_2007 113 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 71065187 Common - hypothetical protein Psyc_0620 10 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 71066450 Common fusA1 elongation factor G Psyc_1895 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 71066650 Common - hypothetical protein Psyc_2096 22 COG3313 COG3313, Predicted Fe-S protein General function prediction only 71065567 Nonpathogen - hypothetical protein Psyc_1007 1 None None None 71065424 Common - IS1329/IS3/IS911 transposase Psyc_0864 66 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064667 Common thiC thiamine biosynthesis protein ThiC Psyc_0086 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 71064759 Common - hypothetical protein Psyc_0179 69 COG2391 COG2391, Predicted transporter component General function prediction only 71064932 Common plsC probable 1-acyl-sn-glycerol-3-phosphate acyltransferase Psyc_0356 94 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 71065168 Common - MFS nitrate/nitrite transporter Psyc_0601 114 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 71066254 Common - YciI-like protein Psyc_1699 62 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 71066256 Common - hypothetical protein Psyc_1701 80 COG4121 COG4121, Uncharacterized conserved protein Function unknown 71065513 Common - putative arsenate reductase Psyc_0953 106 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 71066171 Common - hypothetical protein Psyc_1616 10 None None None 71066105 Common - hypothetical protein Psyc_1550 8 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 71064939 Common lspA probable signal peptidase II Psyc_0363 171 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 71065316 Common - hypothetical protein Psyc_0756 24 None None None 71066444 Common rplJ 50S ribosomal protein L10 Psyc_1889 204 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 71064717 Common - hypothetical protein Psyc_0136 7 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 71065091 Common fabG putative 3-oxoacyl-(acyl-carrier protein) reductase Psyc_0521 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71064807 Nonpathogen - hypothetical protein Psyc_0227 2 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 71064842 Common fur ferric-uptake regulator family Psyc_0265 197 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 71065812 Common yeeE possible TolB periplamsic protein Psyc_1255 62 COG2391 COG2391, Predicted transporter component General function prediction only 71066003 Common - possible Acetone carboxylase alpha subunit Psyc_1448 92 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71065556 Nonpathogen - hypothetical protein Psyc_0996 1 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 71065738 Common cysE probable serine O-acetyltransferase Psyc_1180 197 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 71066061 Common - hypothetical protein Psyc_1506 7 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 71066372 Common pilH putative two-component response regulator Psyc_1817 224 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 71065398 Common - probable class I peptide chain release factor (RF-1) Psyc_0838 111 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 71064644 Common pilC pilin secretion/fimbrial assembly system protein, PilC Psyc_0063 141 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 71065453 Common dgt deoxyguanosinetriphosphate triphosphohydrolase-like protein Psyc_0893 157 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 71065555 Nonpathogen - hypothetical protein Psyc_0995 1 None None None 71066191 Common eno enolase Psyc_1636 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 71066329 Common glyQ glycyl-tRNA synthetase subunit alpha Psyc_1774 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 71064789 Common - hypothetical protein Psyc_0209 127 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 71064583 Common dnaN probable DNA polymerase III, beta subunit Psyc_0002 214 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 71066189 Common - possible nucleotidylyl transferase, pyrophosphorylase Psyc_1634 180 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 71065642 Common - hypothetical protein Psyc_1083 20 COG5505 COG5505, Predicted integral membrane protein Function unknown 71066645 Common - hypothetical protein Psyc_2091 33 COG1269 NtpI, Archaeal/vacuolar-type H+-ATPase subunit I Energy production and conversion 71065025 Nonpathogen - hypothetical protein Psyc_0455 1 None None None 71066090 Common pyrH putative Uridylate Kinase Psyc_1535 234 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 71065347 Common - possible hydrolase Psyc_0787 27 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 71065241 Common - hypothetical protein Psyc_0675 42 COG3651 COG3651, Uncharacterized protein conserved in bacteria Function unknown 71064765 Common pgsA possible phosphatidylglycerophosphate synthase Psyc_0185 203 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 71065848 Common xseA exodeoxyribonuclease VII large subunit Psyc_1291 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 71065489 Common rodA putative rod shape determining protein Psyc_0929 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 71066658 Common - Na(+)-translocating NADH-quinone reductase subunit A Psyc_2104 39 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 71066673 Nonpathogen - hypothetical protein Psyc_2119 1 None None None 71065446 Common - probable phage integrase Psyc_0886 97 COG0582 XerC, Integrase DNA replication, recombination, and repair 71066495 Common tig trigger factor Psyc_1940 214 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 71065902 Common - probable rep helicase, single-stranded DNA-dependent ATPase protein Psyc_1347 227 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 71066431 Common - hypothetical protein Psyc_1876 2 None None None 71065072 Common rpsN 30S ribosomal protein S14 Psyc_0502 208 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 71066270 Common rpe ribulose-5-phosphate 3-epimerase Psyc_1715 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 71065504 Common - transposase, IS4 family related Psyc_0944 27 None None None 71065153 Common nuoD bifunctional NADH:ubiquinone oxidoreductase subunit C/D Psyc_0586 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 71066379 Common metQ ABC methionine transporter, periplasmic solute binding protein metQ Psyc_1824 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 71065252 Common engA GTP-binding protein EngA Psyc_0686 235 COG1160 COG1160, Predicted GTPases General function prediction only 71065435 Nonpathogen - hypothetical protein Psyc_0875 1 None None None 71065618 Common - probable methyltransferase Psyc_1059 72 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 71066430 Nonpathogen - hypothetical protein Psyc_1875 1 None None None 71066606 Common murF probable UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase Psyc_2052 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 71065822 Common - probable StbD-like prevent host death protein Psyc_1265 24 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 71066407 Common - hypothetical protein Psyc_1852 21 COG0393 COG0393, Uncharacterized conserved protein Function unknown 71066474 Common - hypothetical protein Psyc_1919 8 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 71066075 Common - possible peptidylprolyl isomerase Psyc_1520 151 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 71065982 Common - transposase, IS4 family related Psyc_1427 27 None None None 71065699 Common mdc possible ATP:dephospho-CoA triphosphoribosyl transferase Psyc_1141 48 COG1767 CitG, Triphosphoribosyl-dephospho-CoA synthetase Coenzyme metabolism 71066212 Common fumC fumarate hydratase Psyc_1657 238 COG0114 FumC, Fumarase Energy production and conversion 71066054 Common clpS probable ATP-dependent Clp protease adapter protein Psyc_1499 118 COG2127 COG2127, Uncharacterized conserved protein Function unknown 71065885 Common aceE pyruvate dehydrogenase subunit E1 Psyc_1328 134 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 71065796 Common - possible AEC family tranporter Psyc_1239 76 COG0679 COG0679, Predicted permeases General function prediction only 71065996 Common - putative cytochrome c Psyc_1441 35 COG3258 COG3258, Cytochrome c Energy production and conversion 71064940 Common ileS isoleucyl-tRNA synthetase Psyc_0364 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71066120 Common rplM 50S ribosomal protein L13 Psyc_1565 234 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 71064978 Common - hypothetical protein Psyc_0404 58 COG2335 COG2335, Secreted and surface protein containing fasciclin-like repeats Cell envelope biogenesis, outer membrane 71064743 Common - probable acetyl-CoA carboxylase, alpha subunit Psyc_0163 188 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 71065716 Common - possible glycosyl transferase Psyc_1158 70 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 71065014 Common - probable phage protein tail protein Psyc_0444 13 COG4723 COG4723, Phage-related protein, tail component Function unknown 71065221 Common - probable glycosyl transferase Psyc_0655 176 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 71065023 Common - hypothetical protein Psyc_0453 2 COG1110 COG1110, Reverse gyrase DNA replication, recombination, and repair 71065329 Common - probable Peroxiredoxin Psyc_0769 209 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 71064687 Common - succinyl-CoA synthetase alpha subunit Psyc_0106 214 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 71066343 Common - probable transposase IS3/IS150/IS904 family Psyc_1788 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066144 Common - hypothetical protein Psyc_1589 19 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 71065097 Common ilvB acetolactate synthase 3 catalytic subunit Psyc_0527 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 71066635 Common - hypothetical protein Psyc_2081 11 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 71066385 Common - hypothetical protein Psyc_1830 4 None None None 71066030 Common - hypothetical protein Psyc_1475 2 None None None 71066599 Common - hypothetical protein Psyc_2045 28 COG4731 COG4731, Uncharacterized protein conserved in bacteria Function unknown 71065284 Common - hypothetical protein Psyc_0718 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 71066032 Common - putative cysteine desulfurase Psyc_1477 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 71066688 Common - hypothetical protein Psyc_2134 144 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 71066468 Common nadR nicotinamide-nucleotide adenylyltransferase Psyc_1913 107 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 71065366 Common - probable L-carnitine dehydratase, acyl-CoA transferase family Psyc_0806 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 71065731 Common dcaK MFS short chain dicaboxylate:H+ symporter DcaK Psyc_1173 209 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065295 Common - hypothetical protein Psyc_0734 133 COG2860 COG2860, Predicted membrane protein Function unknown 71064643 Common pilD pilin secretion/fimbrial assembly signal peptidase, PilD Psyc_0062 134 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 71066178 Common - probable permease protein, PerM family Psyc_1623 189 COG0628 PerM, Predicted permease General function prediction only 71064598 Common - transposase IS30 family Psyc_0017 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065967 Common leuD isopropylmalate isomerase small subunit Psyc_1412 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 71066578 Common atpD F0F1 ATP synthase subunit beta Psyc_2024 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 71065212 Common - probable pseudouridine synthase Psyc_0646 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 71065213 Common wza probable polysaccharide export system, outer membrane component Psyc_0647 105 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 71065372 Nonpathogen - hypothetical protein Psyc_0812 3 None None None 71065191 Common - small-conductance mechanosensitive ion channel Psyc_0625 200 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 71066039 Common mfd transcription-repair coupling factor Psyc_1484 223 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 71065752 Common - putative secreted protein, autotransporter domain Psyc_1194 65 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 71065264 Common - hypothetical protein Psyc_0698 6 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 71064840 Nonpathogen - hypothetical protein Psyc_0263 4 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 71065515 Common arsB arsenite-antimonite efflux pump, ArsB Psyc_0955 127 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 71065219 Common capD polysaccharide biosynthesis protein CapD Psyc_0653 206 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 71065007 Common - hypothetical protein Psyc_0437 3 None None None 71065133 Nonpathogen - hypothetical protein Psyc_0565 4 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 71066391 Common gltP sodium/proton:dicarboxylate (glutamate) symporter Psyc_1836 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 71065621 Common gdhA2 probable bacterial NAD specific-glutamate dehydrogenase Psyc_1062 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 71066037 Common - putative ferredoxin, 2Fe-2S type Psyc_1482 91 COG0633 Fdx, Ferredoxin Energy production and conversion 71065487 Common radA DNA repair protein RadA Psyc_0927 205 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 71066187 Common pyrC dihydroorotase Psyc_1632 87 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 71065835 Common secF preprotein translocase subunit SecF Psyc_1278 212 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 71065941 Nonpathogen - hypothetical protein Psyc_1386 1 None None None 71066303 Common - transposase, IS4 family related Psyc_1748 27 None None None 71064850 Common lysS/U putative lysyl-tRNA synthetase, class II Psyc_0273 201 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 71066203 Common - putative monofunctional biosynthetic peptidoglycan transglycosylase Psyc_1648 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 71066642 Nonpathogen - hypothetical protein Psyc_2088 2 COG4719 COG4719, Uncharacterized protein conserved in bacteria Function unknown 71065568 Common - probable prophage protein gp36 Psyc_1008 14 COG4387 COG4387, Mu-like prophage protein gp36 Function unknown 71065582 Common - hypothetical protein Psyc_1022 12 None None None 71065465 Common - probable transcriptional regulatory protein, IclR family Psyc_0905 115 COG1414 IclR, Transcriptional regulator Transcription 71065335 Common - cytochrome c oxidase cbb3-type, subunit III Psyc_0775 85 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 71065589 Nonpathogen - hypothetical protein Psyc_1029 1 None None None 71066354 Common - hypothetical protein Psyc_1799 24 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 71064969 Nonpathogen - hypothetical protein Psyc_0394 1 None None None 71066239 Common - putative sugar efflux transporter, Major facilitator superfamily (MFS) Psyc_1684 84 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71066556 Common tatC twin-arginine translocation protein TatC Psyc_2002 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 71066246 Common - possible ThrE family exporter, large subunit Psyc_1691 32 COG2966 COG2966, Uncharacterized conserved protein Function unknown 71065477 Common - hypothetical protein Psyc_0917 18 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 71066551 Common rplT 50S ribosomal protein L20 Psyc_1997 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 71066614 Nonpathogen - hypothetical protein Psyc_2060 1 None None None 71064923 Common - putative signal transduction histidine kinase sensor Psyc_0347 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71065787 Common - probable transcriptional regulator, AsnC family Psyc_1230 160 COG1522 Lrp, Transcriptional regulators Transcription 71065971 Common - putative outer membrane protein Psyc_1416 23 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 71065914 Common - phosphoglucomutase/phosphomannosemutase family protein Psyc_1359 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 71066266 Common rpmG 50S ribosomal protein L33 Psyc_1711 78 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 71064958 Common tufBa elongation factor Tu Psyc_0383 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 71065147 Common argB putative acetylglutamate kinase Psyc_0579 218 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 71064816 Common - possible pilus assembly protein PilE Psyc_0238 32 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 71065751 Common - DMT superfamily efflux pump Psyc_1193 68 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 71065762 Common - possible bacterial lipid A biosynthesis acyltransferase Psyc_1204 81 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 71066539 Common tesB probable acyl-CoA thioesterase II Psyc_1985 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 71066544 Common rho transcription termination factor Rho Psyc_1990 205 COG1158 Rho, Transcription termination factor Transcription 71066588 Common znuC ABC zinc transporter, ATPase subunit ZnuC Psyc_2034 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 71066603 Common cls probable cardiolipin synthase Psyc_2049 150 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 71064893 Nonpathogen - hypothetical protein Psyc_0317 1 None None None 71064830 Common hom homoserine dehydrogenase Psyc_0253 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 71066414 Common - hypothetical protein Psyc_1859 2 None None None 71065605 Common fabI enoyl acyl carrier protein reductase Psyc_1045 217 COG0623 FabI, Enoyl- acyl-carrier-protein 71066112 Common adk putative adenylate kinase Psyc_1557 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 71065861 Common ilvD dihydroxy-acid dehydratase Psyc_1304 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 71066210 Common - possible rhomboid family protein Psyc_1655 39 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 71065388 Common metK S-adenosylmethionine synthetase Psyc_0828 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 71064860 Common slyD putative peptidyl-prolyl cis-trans isomerase, FKBP-type Psyc_0283 131 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 71064723 Nonpathogen - hypothetical protein Psyc_0142 1 None None None 71066527 Nonpathogen - hypothetical protein Psyc_1973 1 None None None 71066230 Common - hypothetical protein Psyc_1675 35 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 71064775 Common nadD possible cytidylyltransferase/nicotinate-nucleotide adenylyltransferase Psyc_0195 143 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 71065685 Common recB possible exodeoxyribonuclease V, beta chain Psyc_1127 201 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 71066019 Common - hypothetical protein Psyc_1464 25 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 71064992 Nonpathogen - hypothetical protein Psyc_0422 6 None None None 71065471 Common lpxB probable lipidA disaccharide synthetase Psyc_0911 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 71066421 Common - probable long-chain fatty acid-CoA ligase (AMP-binding) Psyc_1866 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71065758 Common - possible thioesterase Psyc_1200 79 COG0824 FcbC, Predicted thioesterase General function prediction only 71064793 Common - hypothetical protein Psyc_0213 42 COG3245 CycB, Cytochrome c5 Energy production and conversion 71065936 Common - possible transcription factor Psyc_1381 17 COG2378 COG2378, Predicted transcriptional regulator Transcription 71066681 Common - probable band 7 protein Psyc_2127 204 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 71066566 Common folA probable dihydrofolate reductase Psyc_2012 143 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 71065324 Common - uncharacterized transmembrane protein Psyc_0764 42 COG2899 COG2899, Uncharacterized protein conserved in bacteria Function unknown 71065877 Common - probable ATPase, ParA type Psyc_1320 220 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 71065630 Common - ABC sulfate/thiosulfate transporter, periplasmic solute-binding protein Psyc_1071 93 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 71066297 Common - hypothetical protein Psyc_1742 8 None None None 71065358 Common gcvH glycine cleavage system protein H Psyc_0798 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 71066010 Common aroC chorismate synthase Psyc_1455 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 161611071 Common rpmE2 50S ribosomal protein L31 type B Psyc_1916 130 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 71065639 Common - putative glutathione S-transferase YghU Psyc_1080 95 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71065268 Common - hypothetical protein Psyc_0702 183 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 71065603 Common - bifunctional methionine sulfoxide reductase A/B protein Psyc_1043 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 71066424 Common - hypothetical protein Psyc_1869 72 COG1432 COG1432, Uncharacterized conserved protein Function unknown 71064835 Common - probable phosphoglycolate phosphatase Psyc_0258 161 COG0546 Gph, Predicted phosphatases General function prediction only 71066070 Common cydA cytochrome bd ubiquinol oxidase, subunit I Psyc_1515 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 71066186 Common argG arginino succinate synthase Psyc_1631 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 71064812 Common pilV probable type IV fimbrial biogenesis protein PilV Psyc_0234 7 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 71065783 Common accB putative acetyl-CoA carboxylase biotin carboxyl carrier protein Psyc_1226 172 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 71066213 Common - possible 5-formyltetrahydrofolate cyclo-ligase Psyc_1658 116 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 71064966 Common dnaQ DNA polymerase III subunit epsilon Psyc_0391 78 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 71066242 Common - probable transposase IS30 family Psyc_1687 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064870 Common proA gamma-glutamyl phosphate reductase Psyc_0293 194 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 71065855 Nonpathogen - hypothetical protein Psyc_1298 1 None None None 71066564 Common - prolipoprotein diacylglyceryl transferase Psyc_2010 208 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 71064831 Common dsbC possible thiol:disulfide interchange protein Psyc_0254 64 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 71064772 Common - putative transposase and inactivated derivatives Psyc_0192 12 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066608 Common ftsI possible penicillin-binding protein 3 (transpeptidase) Psyc_2054 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 71065883 Common ompW probable outer membrane protein, OmpW family Psyc_1326 68 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 71064592 Common - probable Zinc-containing alcohol dehydrogenase Psyc_0011 120 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 71066023 Common mrcB probable penicillin-binding protein transpeptidase domain Psyc_1468 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 71066586 Common znuA ABC zinc transporter, periplasmic solute binding protein ZnuA Psyc_2032 68 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 71065943 Common sgaA probable serine-glyoxylate aminotransferase Psyc_1388 161 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 71064771 Common - possible alkaline phosphatase Psyc_0191 166 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 71065086 Common - hypothetical protein Psyc_0516 195 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 71066636 Common - hypothetical protein Psyc_2082 70 COG1814 COG1814, Uncharacterized membrane protein Function unknown 71065697 Common - probable integral membrane protein, DUF81 family Psyc_1139 146 COG0730 COG0730, Predicted permeases General function prediction only 71064877 Common - probable phosphatase Psyc_0300 65 COG3211 PhoX, Predicted phosphatase General function prediction only 71064585 Common gyrB putative DNA gyrase, subunit B Psyc_0004 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 71065999 Common - putative transposase Psyc_1444 4 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064935 Common - transposase, IS4 family related Psyc_0359 27 None None None 71064976 Nonpathogen - hypothetical protein Psyc_0402 4 None None None 71065323 Common - probable tellurium resistance TerD Psyc_0763 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 71065984 Common - coenzyme A transferase, subunit B Psyc_1429 93 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 71064885 Common - acyl-CoA synthetase Psyc_0308 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71064704 Common - short chain dehydrogenase Psyc_0123 232 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71064656 Nonpathogen - hypothetical protein Psyc_0075 1 None None None 71065361 Nonpathogen - hypothetical protein Psyc_0801 1 None None None 71065750 Common - hypothetical protein Psyc_1192 7 None None None 71066697 Common trmE tRNA modification GTPase TrmE Psyc_2143 223 COG0486 ThdF, Predicted GTPase General function prediction only 71065690 Common - probable transcriptional regulator, LysR family Psyc_1132 181 COG0583 LysR, Transcriptional regulator Transcription 71066429 Common gltB glutamate synthase subunit alpha Psyc_1874 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 71066346 Common - probable transcriptional regulator, ArsR family Psyc_1791 140 COG0640 ArsR, Predicted transcriptional regulators Transcription 71064898 Common - hypothetical protein Psyc_0322 4 None None None 71065237 Common rfbP1 probable bacterial sugar transferase Psyc_0671 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 71064952 Common hemH putative ferrochelatase Psyc_0376 162 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 71066618 Common - hypothetical protein Psyc_2064 73 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 71065466 Common - hypothetical protein Psyc_0906 4 None None None 71065119 Common - hypothetical protein Psyc_0551 15 None None None 71066545 Nonpathogen - hypothetical protein Psyc_1991 1 None None None 71065279 Common ubiE probable ubiquinone/menaquinone biosynthesis methyltransferase Psyc_0713 213 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 71065744 Common pheA probable chorismate mutase/prephenate dehydratase Psyc_1186 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 71065636 Common bfrA ferritin:Bacterioferritin Psyc_1077 103 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 71066554 Common tatA twin-arginine translocation protein TatA/E Psyc_2000 60 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 71064819 Common - probable pilus assembly protein major pilin PilA Psyc_0241 13 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 71066234 Common kamA possible L-lysine 2,3-aminomutase Psyc_1679 125 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 71064827 Nonpathogen - hypothetical protein Psyc_0250 4 COG3861 COG3861, Uncharacterized protein conserved in bacteria Function unknown 71064691 Common - hypothetical protein Psyc_0110 182 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 71065757 Common xthA exonuclease III Psyc_1199 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 71066334 Common - transposase IS3/IS911 family Psyc_1779 62 None None None 71064792 Nonpathogen - hypothetical protein Psyc_0212 1 None None None 71064597 Common - putative transposase OrfA, IS3/IS911family Psyc_0016 62 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065729 Common - enoyl-CoA hydratase Psyc_1171 189 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 71066265 Common rpmB 50S ribosomal protein L28 Psyc_1710 163 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 71066512 Common - putative transposase Psyc_1958 41 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065197 Common nadB probable L- aspartate oxidase (quinolinate synthetase, B protein) Psyc_0631 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 71066576 Common - putative two-component response regulator (CheY-like receiver domain) Psyc_2022 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71066142 Common - copper/silver efflux P-type ATPase Psyc_1587 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 71066396 Common - hypothetical protein Psyc_1841 80 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 71065991 Common - ABC transporter, inner membrane subunit Psyc_1436 113 COG4120 COG4120, ABC-type uncharacterized transport system, permease component General function prediction only 71065380 Common - hypothetical protein Psyc_0820 51 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 71065417 Common - peptidylprolyl isomerase Psyc_0857 129 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 71065297 Common - probable radical activating enzyme Psyc_0736 162 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 71065433 Nonpathogen - hypothetical protein Psyc_0873 2 None None None 71065683 Common hpt hypoxanthine-guanine phosphoribosyltransferase Psyc_1125 142 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 71065421 Nonpathogen - hypothetical protein Psyc_0861 1 None None None 71066221 Common - putative Trp operon transcriptional repressor Psyc_1666 7 COG2973 TrpR, Trp operon repressor Transcription 71065831 Nonpathogen - hypothetical protein Psyc_1274 1 None None None 71064944 Common - putative oxidoreductase, FAD binding Psyc_0368 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 71064714 Common - putative ABC transporter ATP-binding protein Psyc_0133 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 71065125 Common pntB NAD(P) transhydrogenase, beta subunit Psyc_0557 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 71066626 Common pgpA probable phosphatidylglycerophosphatase A Psyc_2072 88 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 71065155 Common nuoF NADH dehydrogenase I, F subunit Psyc_0588 163 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 71066198 Common - malate synthase G Psyc_1643 73 COG2225 AceB, Malate synthase Energy production and conversion 71066081 Common lpxA UDP-N-acetylglucosamine acyltransferase Psyc_1526 152 COG1043 LpxA, Acyl- acyl carrier protein 71065012 Nonpathogen - hypothetical protein Psyc_0442 1 None None None 71066308 Common pyrE orotate phosphoribosyltransferase Psyc_1753 139 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 71066408 Common - hypothetical protein Psyc_1853 104 COG0393 COG0393, Uncharacterized conserved protein Function unknown 71064983 Common - hypothetical protein Psyc_0411 47 COG3762 COG3762, Predicted membrane protein Function unknown 71066580 Common atpA F0F1 ATP synthase subunit alpha Psyc_2026 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 71066002 Common - hypothetical protein Psyc_1447 8 None None None 71065574 Common - hypothetical protein Psyc_1014 8 None None None 71065667 Common - metal Ion (Mn2+/Fe2+) transporter, Nramp Family Psyc_1109 20 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 71066253 Common ispZ possible intracellular septation protein A Psyc_1698 90 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 71066684 Common bioF probable 8-amino-7-oxononanoate synthase Psyc_2130 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 71065056 Common maf probable maf protein implicated in inhibition of septum formation Psyc_0486 179 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 71066526 Common fabF beta-ketoacyl-ACP synthase Psyc_1972 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71066352 Common ahpC putative alkyl hydroperoxide reductase, subunit C Psyc_1797 220 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 71064682 Common sdhB succinate dehydrogenase iron-sulfur subunit Psyc_0101 206 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 71064607 Nonpathogen - hypothetical protein Psyc_0026 1 None None None 71065143 Common - hypothetical protein Psyc_0575 3 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 71064942 Common - putative amidohydrolase protein Psyc_0366 180 COG0388 COG0388, Predicted amidohydrolase General function prediction only 71065228 Common - hypothetical protein Psyc_0662 78 COG2089 SpsE, Sialic acid synthase Cell envelope biogenesis, outer membrane 71065686 Common recC possible exoribodeoxynuclease V, gamma subunit Psyc_1128 62 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 71066330 Common - putative stress-responsive transcriptional regulator, PspC Psyc_1775 38 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 71066492 Nonpathogen - hypothetical protein Psyc_1937 2 None None None 71066033 Common nifU scaffold protein Psyc_1478 149 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 71066383 Common ccmB ABC exporter, inner membrane subunit CcmB Psyc_1828 82 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 71065862 Common - Na+/H+ antiporter, CPA1 family Psyc_1305 34 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 71064722 Common - possible 4-amino-4-deoxychorismate lyase Psyc_0141 39 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 71066164 Nonpathogen - hypothetical protein Psyc_1609 4 None None None 71066488 Common fadA 3-ketoacyl-CoA thiolase Psyc_1933 175 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 71065291 Common - possible transcriptional regulatory protein, TetR family Psyc_0730 45 COG1309 AcrR, Transcriptional regulator Transcription 71066110 Common - probable glutaredoxin Psyc_1555 123 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 71065065 Common rpsC 30S ribosomal protein S3 Psyc_0495 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 71065909 Common - hypothetical protein Psyc_1354 5 None None None 71066359 Common - hypothetical protein Psyc_1804 30 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 71064763 Common - hypothetical protein Psyc_0183 134 COG2081 COG2081, Predicted flavoproteins General function prediction only 71064921 Common - hypothetical protein Psyc_0345 31 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 71065973 Common - hypothetical protein Psyc_1418 2 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 71066284 Common - glutathione-regulated K+ efflux antiporter, CPA2 family Psyc_1729 211 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 71066701 Common rpmH 50S ribosomal protein L34 Psyc_2147 198 None None None 71066123 Common trpS tryptophanyl-tRNA synthetase Psyc_1568 230 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065135 Common - hypothetical protein Psyc_0567 28 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 71066411 Common - hypothetical protein Psyc_1856 2 None None None 71064780 Common dapF probable diaminopimelate epimerase Psyc_0200 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 71065332 Common - hypothetical protein Psyc_0772 154 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 71066301 Common ftsA possible cell division protein FtsA Psyc_1746 175 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 71065799 Common - probable glutaredoxin-related protein Psyc_1242 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 71065826 Common - possible ferrodoxin, iron-sulfur domain Psyc_1269 29 COG0633 Fdx, Ferredoxin Energy production and conversion 71065162 Common nuoM NADH dehydrogenase subunit M Psyc_0595 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 71065962 Common ansA possible L-asparaginase, type I Psyc_1407 51 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 71065875 Common - probable MotA/TolQ/ExbB proton channel Psyc_1318 77 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 71066332 Common - hypothetical protein Psyc_1777 28 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 71065819 Common - hypothetical protein Psyc_1262 6 COG2921 COG2921, Uncharacterized conserved protein Function unknown 71066363 Common minC possible septum formation inhibitor, MinC Psyc_1808 80 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 71066376 Common - putative signal transduction histidine kinase sensor Psyc_1821 194 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71064648 Common - hypothetical protein Psyc_0067 132 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 71065565 Nonpathogen - hypothetical protein Psyc_1005 1 None None None 71065780 Common - entericidin A lipoprotein Psyc_1223 2 COG5510 COG5510, Predicted small secreted protein Function unknown 71065809 Nonpathogen - hypothetical protein Psyc_1252 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 71065253 Common dacC probable D-alanyl-D-alanine carboxypeptidase 1, S11 family Psyc_0687 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 71065654 Common - possible acetyl-CoA carboxylase, biotin carboxyl carrier protein Psyc_1096 129 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 71064621 Common - hypothetical protein Psyc_0040 11 None None None 71066461 Common - hypothetical protein Psyc_1906 105 COG0657 Aes, Esterase/lipase Lipid metabolism 71064751 Common - 50S ribosomal protein L25/general stress protein Ctc Psyc_0171 193 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 71064995 Common - possible cytochrome C, class I Psyc_0425 44 COG3245 CycB, Cytochrome c5 Energy production and conversion 71065615 Common - putative transcriptional regulatory protein LysR family Psyc_1056 182 COG0583 LysR, Transcriptional regulator Transcription 71065792 Common ampG muropeptide MFS uptake transporter AmpG Psyc_1235 102 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71066162 Common ktrB K+ uptake transporter, KtrB subunit Psyc_1607 117 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 71065952 Common yaiL hypothetical protein Psyc_1397 30 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 71066445 Common rplA 50S ribosomal protein L1 Psyc_1890 243 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 71066074 Common ostA possible organic solvent tolerance protein Psyc_1519 124 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 71065948 Common - possible sterol desaturase Psyc_1393 75 COG3000 ERG3, Sterol desaturase Lipid metabolism 71064627 Common - hypothetical protein Psyc_0046 71 COG0795 COG0795, Predicted permeases General function prediction only 71065643 Common - probable transcription regulator protein Psyc_1084 209 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 71064647 Common secG preprotein translocase subunit SecG Psyc_0066 41 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 71065109 Common fbp fructose-1,6-bisphosphatase Psyc_0541 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 71065408 Common - probable transmembrane protein Psyc_0848 84 COG0730 COG0730, Predicted permeases General function prediction only 71065395 Nonpathogen - hypothetical protein Psyc_0835 1 None None None 71064628 Common - hypothetical protein Psyc_0047 79 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 71066671 Nonpathogen - hypothetical protein Psyc_2117 1 None None None 71065825 Common nrdB ribonucleotide-diphosphate reductase subunit beta Psyc_1268 152 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 71066091 Common - hypothetical protein Psyc_1536 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 71066628 Common glmS probable glucosamine-fructose-6-phosphate aminotransferase Psyc_2074 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 71065318 Common - hypothetical protein Psyc_0758 24 None None None 71065590 Common - probable bacteriophage tail tape meausure protein Psyc_1030 27 COG5281 COG5281, Phage-related minor tail protein Function unknown 71064617 Common - hypothetical protein Psyc_0036 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 71066678 Common gph phosphoglycolate phosphatase Psyc_2124 161 COG0546 Gph, Predicted phosphatases General function prediction only 71066057 Common hemE putative uroporphyrinogen decarboxylase Psyc_1502 178 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 71066438 Common pilM probable type IV pilus assembly protein Psyc_1883 72 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 71065638 Common - MFS multidrug efflux pump, EmrB family Psyc_1079 220 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065286 Common - probable response regulator receiver, fis type Psyc_0720 145 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 71066069 Common - hypothetical protein Psyc_1514 10 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 71064752 Common prsA ribose-phosphate pyrophosphokinase Psyc_0172 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 71066324 Common - hypothetical protein Psyc_1769 8 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 71065141 Common macA macrolide secretion protein MacA, HlyD family Psyc_0573 170 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 71064639 Common recN possible DNA repair protein Psyc_0058 199 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 71064891 Common - pantothenate kinase Psyc_0314 62 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 71065178 Common moaA molybdenum cofactor biosynthesis protein A Psyc_0611 198 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 71066582 Common atpF ATP synthase Fo, B subunit Psyc_2028 95 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 71065093 Common - hypothetical protein Psyc_0523 52 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 71065042 Common - possible transcriptional regulator, Cro/CI family Psyc_0472 22 COG2932 COG2932, Predicted transcriptional regulator Transcription 71066274 Common htpG heat shock protein 90 Psyc_1719 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 71066655 Common vacB probable exoribonuclease RNase R Psyc_2101 203 COG0557 VacB, Exoribonuclease R Transcription 71066485 Common phoU possible phosphate transport system regulatory protein Psyc_1930 195 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 71065082 Common rpsK 30S ribosomal protein S11 Psyc_0512 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 71066106 Common cls cardiolipin synthetase Psyc_1551 150 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 71064829 Common - putative acetyl-CoA acyltransferase Psyc_0252 186 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 71065779 Common spoU probable tRNA/rRNA methyltransferase Psyc_1222 167 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 71064919 Common relA putative RelA/SpoT family protein Psyc_0343 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 71064671 Common hemD possible uroporphyrinogen-III synthase Psyc_0090 5 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 71064735 Nonpathogen - hypothetical protein Psyc_0155 1 None None None 71064679 Common sdhC succinate dehydrogenase cytochrome b-566 subunit Psyc_0098 66 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 71066293 Common ftsH putative ATP-dependent metalloprotease FtsH Psyc_1738 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 71065200 Common nadC nicotinate-nucleotide pyrophosphorylase Psyc_0634 205 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 71066499 Common pfoR probable toxin regulator pfoR Psyc_1944 13 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 71064685 Common lpdG dihydrolipoamide dehydrogenase Psyc_0104 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 71066574 Common envZ probable signal transduction histidine kinase sensor Psyc_2020 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71066137 Common - MFS Ni2+ efflux pump NreB Psyc_1582 73 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71065887 Common - possible endonuclease/exonuclease/phosphatase family protein Psyc_1330 13 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 71064664 Common - ABC efflux transporter, fused ATPase and inner membrane domains Psyc_0083 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 71066649 Common - hypothetical protein Psyc_2095 45 COG3150 COG3150, Predicted esterase General function prediction only 71066315 Common - probable phosphinothricin acetyltransferase Psyc_1760 47 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 71065356 Common gcvP glycine dehydrogenase Psyc_0796 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 71065674 Common - probable acetyltransferase, GNAT family Psyc_1116 92 COG2153 ElaA, Predicted acyltransferase General function prediction only 71065349 Common - tRNA-dihydrouridine synthase A Psyc_0789 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 71066439 Common mrcA probable penicillin-binding protein 1A Psyc_1884 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 71065846 Common - hypothetical protein Psyc_1289 77 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 71065266 Common yjeG probable FxsA cytoplasmic membrane protein Psyc_0700 2 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 71066410 Nonpathogen - hypothetical protein Psyc_1855 1 None None None 71065024 Nonpathogen - hypothetical protein Psyc_0454 1 None None None 71064764 Common acs probable acetyl-coenzyme A synthetase Psyc_0184 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 71065726 Common - probable medium chain acyl-CoA ligase (AMP binding domain) Psyc_1168 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71064740 Common phnA PhnA protein Psyc_0160 98 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 71065342 Common lolD ABC lipoprotein exporter, ATPase subunit, LolD Psyc_0782 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 71065927 Common - hypothetical protein Psyc_1372 20 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 71064696 Common folK probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (HPPK) Psyc_0115 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 71065529 Common btuB outer membrane receptor for transport of vitamin B Psyc_0969 126 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 71066051 Common cumB probable cytidine/deoxycytidylate deaminase Psyc_1496 217 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 71064857 Common - possible outer membrane protein, OmpA family Psyc_0280 160 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 71065300 Common - hypothetical protein Psyc_0739 69 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 71066205 Common glcD glycolate oxidase subunit D Psyc_1650 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 71065895 Common rpsR 30S ribosomal protein S18 Psyc_1338 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 71066666 Common cynX MFS cyanate efflux pump, CynX Psyc_2112 103 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 71065475 Common - putative phenazine biosynthesis protein PhzF family Psyc_0915 122 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 71065047 Common - hypothetical protein Psyc_0477 9 None None None 71065112 Common - hypothetical protein Psyc_0544 9 COG3305 COG3305, Predicted membrane protein Function unknown 71065789 Common - probable protein kinase, ABC1 family Psyc_1232 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 71066237 Common - probable Mg-dependent deoxyribonuclease, TatD family Psyc_1682 216 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 71064610 Common - probable ornithine decarboxylase Psyc_0029 202 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 71066155 Common - possible outer membrane efflux protein, OMF family Psyc_1600 77 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 71065498 Common - hypothetical protein Psyc_0938 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 71065526 Common - hypothetical protein Psyc_0966 184 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 71064869 Common - possible guanine-specific ribonuclease with a cold-shock DNA-binding domain Psyc_0292 51 COG4290 COG4290, Guanyl-specific ribonuclease Sa Nucleotide transport and metabolism 71065419 Nonpathogen - hypothetical protein Psyc_0859 1 None None None 71065853 Common ppa inorganic pyrophosphatase Psyc_1296 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 71066597 Common glnK nitrogen regulatory protein P-II Psyc_2043 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 71065456 Common - hypothetical protein Psyc_0896 6 None None None 71066452 Common rpsL 30S ribosomal protein S12 Psyc_1897 239 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 71065549 Common - merops peptidase family S24 Psyc_0989 23 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 71066686 Common dnaK chaperone protein dnaK Psyc_2132 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 71064749 Common panD aspartate alpha-decarboxylase Psyc_0169 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 71065368 Common - probable succinic-semialdehyde dehydrogenase Psyc_0808 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 71066427 Common - hypothetical protein Psyc_1872 17 COG1289 COG1289, Predicted membrane protein Function unknown 71066459 Common murA probable UDP-N-acetylglucosamine 1-carboxyvinyltransferase Psyc_1904 210 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 71066044 Common - possible Metallo-phosphoesterase Psyc_1489 33 COG1409 Icc, Predicted phosphohydrolases General function prediction only 71065599 Common - ABC peptide transporter, inner membrane subunit Psyc_1039 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 71065126 Common - hypothetical protein Psyc_0558 10 COG0824 FcbC, Predicted thioesterase General function prediction only 71064933 Common - putative oxidoreductase, aldo/keto reductase Psyc_0357 194 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 71066226 Common adhC Zn-dependent alcohol dehydrogenase class III Psyc_1671 191 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 71065302 Common cfa putative cyclopropane-fatty-acyl-phospholipid synthase Psyc_0741 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 71064954 Common polA putative DNA polymerase I Psyc_0378 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 71066207 Common glcF glycolate oxidase iron-sulfur subunit Psyc_1652 170 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 71065160 Common nouK NADH dehydrogenase I, K subunit Psyc_0593 25 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 71064706 Common - hypothetical protein Psyc_0125 126 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 71065918 Nonpathogen - hypothetical protein Psyc_1363 1 None None None 71065363 Common - hypothetical protein Psyc_0803 58 COG3825 COG3825, Uncharacterized protein conserved in bacteria Function unknown 71066552 Common rpmI 50S ribosomal protein L35 Psyc_1998 148 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 71065096 Common - hypothetical protein Psyc_0526 5 None None None 71065585 Nonpathogen - hypothetical protein Psyc_1025 1 None None None 71065226 Common - NeuB family protein with antifreeze-like domains Psyc_0660 78 COG2089 SpsE, Sialic acid synthase Cell envelope biogenesis, outer membrane 71064963 Common trxB putative thioredoxin reductase Psyc_0388 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 71066699 Common - hypothetical protein Psyc_2145 179 COG0759 COG0759, Uncharacterized conserved protein Function unknown 71064883 Common gltL ABC glutamate/aspartate transporter, inner membrane subunit GltL Psyc_0306 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 71066288 Common recX possible inhibitor/regulator of recA, recX Psyc_1733 53 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 71064663 Common alkB probable alkylated DNA repair protein Psyc_0082 40 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 71065449 Common - probable bacterial type II secretion system protein Psyc_0889 212 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 71065562 Common - probable Mu-like prophage protein Psyc_1002 23 COG4383 COG4383, Mu-like prophage protein gp29 Function unknown 71066095 Common - hypothetical protein Psyc_1540 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 71066168 Common - hypothetical protein Psyc_1613 42 COG3564 COG3564, Uncharacterized protein conserved in bacteria Function unknown 71065681 Common cstA probable carbon starvation protein A Psyc_1123 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 71066543 Common trxA putative thioredoxin Psyc_1989 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 71066009 Common - probable Phospholipase/Carboxylesterase family Psyc_1454 89 COG0400 COG0400, Predicted esterase General function prediction only 71065084 Common rpoA DNA-directed RNA polymerase subunit alpha Psyc_0514 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 71065159 Common nuoJ probable NADH dehydrogenase I, J subunit Psyc_0592 156 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 71065911 Common - MFS drug efflux transporter (RmrB) Psyc_1356 46 None None None 71065746 Nonpathogen - hypothetical protein Psyc_1188 1 None None None 71065220 Common - putative DegT/DnrJ/EryC1/StrS aminotransferase Psyc_0654 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 71064837 Common scyA probable cytochrome c, class I Psyc_0260 22 COG3245 CycB, Cytochrome c5 Energy production and conversion 71065516 Common rpiA ribose-5-phosphate isomerase A Psyc_0956 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 71064677 Nonpathogen - hypothetical protein Psyc_0096 1 None None None 71066357 Common - hypothetical protein Psyc_1802 19 COG3489 COG3489, Predicted periplasmic lipoprotein General function prediction only 71066548 Common - histone-like bacterial DNA-binding protein Psyc_1994 201 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 71065734 Common ggt putative gamma-glutamyltranspeptidase Psyc_1176 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 71066161 Common ktrA K+ uptake transporter, KtrA subunit Psyc_1606 113 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 71066571 Common trmD putative tRNA (guanine-N1)-methyltransferase Psyc_2017 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 71064599 Common - hypothetical protein Psyc_0018 13 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 71066263 Common - hypothetical protein Psyc_1708 70 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 71065359 Common gcvT glycine cleavage system aminomethyltransferase T Psyc_0799 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 71066021 Common - hypothetical protein Psyc_1466 28 COG4760 COG4760, Predicted membrane protein Function unknown 71066537 Common - transposase, mutator family Psyc_1983 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066025 Common prmA putative ribosomal protein L11 methyltransferase Psyc_1470 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 71065027 Nonpathogen - hypothetical protein Psyc_0457 1 None None None 71064998 Common queF 7-cyano-7-deazaguanine reductase Psyc_0428 104 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 71065079 Common secY preprotein translocase subunit SecY Psyc_0509 245 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 71064810 Common comF possible competence protein F Psyc_0232 89 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 71066426 Common - probable 3-oxoacyl-(acyl-carrier-protein) reductase Psyc_1871 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71066336 Common - possible heme-hemopexin-binding/utilization protein Psyc_1781 80 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 71065933 Nonpathogen - hypothetical protein Psyc_1378 1 None None None 71064833 Common - possible ribonuclease EG Psyc_0256 191 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 71066200 Nonpathogen - hypothetical protein Psyc_1645 1 None None None 71064846 Common - hypothetical protein Psyc_0269 218 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 71066086 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase Psyc_1531 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 71065428 Common alpA possible prophage regulatory protein AlpA Psyc_0868 14 COG3311 AlpA, Predicted transcriptional regulator Transcription 71066248 Common gor glutathione reductase Psyc_1693 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 71065803 Nonpathogen - hypothetical protein Psyc_1246 1 None None None 71064814 Common - possible pilus assembly protein PilX Psyc_0236 2 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 71065352 Common metZ probable O-succinylhomoserine sulfhydrylase Psyc_0792 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 71065765 Common - probable glycosyl transferase family 25, LPS biosynthesis Psyc_1207 27 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 71064849 Common - probable erythronate-4-phosphate dehydrogenase Psyc_0272 221 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 71065785 Common - hypothetical protein Psyc_1228 2 None None None 71065634 Common arsR probable transcriptional regulatory protein, ArsR family Psyc_1075 129 COG0640 ArsR, Predicted transcriptional regulators Transcription 71066232 Common - cytochrome C2 Psyc_1677 54 COG3474 COG3474, Cytochrome c2 Energy production and conversion 71065258 Common - UDP-2,3-diacylglucosamine hydrolase Psyc_0692 73 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 71064974 Common - hypothetical protein Psyc_0400 38 COG4338 COG4338, Uncharacterized protein conserved in bacteria Function unknown 71065704 Common mdcA malonate decarboxylase, alpha subunit Psyc_1146 27 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 71065900 Common - possible endoribonuclease Psyc_1345 140 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 71065442 Nonpathogen yihD hypothetical protein Psyc_0882 1 None None None 71065485 Common - possible OstA-like protein Psyc_0925 55 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 71065601 Common - ABC peptide transporter, fused ATPase domains Psyc_1041 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 71065481 Common - putative Hfq family protein Psyc_0921 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 71065881 Common - hypothetical protein Psyc_1324 21 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 71066584 Common - F0F1 ATP synthase subunit A Psyc_2030 205 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 71066690 Common - hypothetical protein Psyc_2136 47 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 71066215 Common topA DNA topoisomerase I Psyc_1660 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 71064587 Common - probable transposase IS3/IS150/IS904 family Psyc_0006 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065123 Common - putative pyridine nucleotide transhydrogenase Psyc_0555 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 71065986 Common - GntP family transporter Psyc_1431 47 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 71065157 Common nuoH NADH dehydrogenase subunit H Psyc_0590 187 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 71065541 Common - hypothetical protein Psyc_0981 9 None None None 71066401 Common - CspE Psyc_1846 178 COG1278 CspC, Cold shock proteins Transcription 71064997 Common - ABC transporter, inner membrane subunit Psyc_0427 154 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 71066528 Common - probable metallopeptidase protein Psyc_1974 188 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 71065945 Common dhaa putative D-b-hydroxy-aspartate aldolase Psyc_1390 69 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 71066639 Common - probable DNA helicase Psyc_2085 224 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 71065058 Common rpsJ 30S ribosomal protein S10 Psyc_0488 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 71066011 Common hemK N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Psyc_1456 221 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 71065864 Common - hypothetical protein Psyc_1307 8 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 71065572 Nonpathogen - hypothetical protein Psyc_1012 1 None None None 71064650 Common infB translation initiation factor IF-2 Psyc_0069 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 71065431 Common - hypothetical protein Psyc_0871 13 None None None 71066348 Common - hypothetical protein Psyc_1793 32 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 71064725 Common - hypothetical protein Psyc_0144 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 71066000 Common - hypothetical protein Psyc_1445 64 None None None 71065740 Common folB probable dihydroneopterin aldolase Psyc_1182 102 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 71066281 Common - putative Endoribonuclease L-PSP Psyc_1726 181 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 71064946 Common - hypothetical protein Psyc_0370 109 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 71066514 Common - Na+/solute symporter, SSS family Psyc_1960 163 COG4147 DhlC, Predicted symporter General function prediction only 71064605 Common - possible pseudouridine synthase Psyc_0024 203 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 71065061 Common rplW 50S ribosomal protein L23 Psyc_0491 207 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 71064955 Common ohrA probable organic hydroperoxide resistance protein Psyc_0379 89 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 71064746 Common - hypothetical protein Psyc_0166 39 COG0762 COG0762, Predicted integral membrane protein Function unknown 71066501 Common argS arginyl-tRNA synthetase Psyc_1946 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71066055 Common - hypothetical protein Psyc_1500 2 None None None 71065045 Nonpathogen - hypothetical protein Psyc_0475 1 None None None 71065749 Common - probable alpha/beta hydrolase fold family esterase Psyc_1191 87 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 71065938 Common - hypothetical protein Psyc_1383 97 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 71066035 Common hscB probable co-chaperone Hsc20 heat shock proteins related Psyc_1480 35 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 71066217 Common exbD iopolymer transport protein ExbD/TolR Psyc_1662 142 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 71066015 Common alaS alanyl-tRNA synthetase, class IIc Psyc_1460 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71066682 Common - hypothetical protein Psyc_2128 48 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 71065660 Common - probable acetyl-CoA carboxylase, biotin carboxyl carrier proteine Psyc_1102 175 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 71066184 Common - hypothetical protein Psyc_1629 38 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 71065993 Common - probable transcriiptional regulatory protein, LuxR family Psyc_1438 199 COG4566 TtrR, Response regulator Signal transduction mechanisms 71065713 Common deoD probable purine-nucleoside phosphorylase Psyc_1155 141 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 71064754 Common - hypothetical protein Psyc_0174 26 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 71066653 Common infC initiation factor 3 (IF-3) Psyc_2099 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 71066521 Common upp uracil phosphoribosyltransferase Psyc_1967 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 71065975 Common - putative ubiquinol-cytochrome c reductase, iron-sulfur subunit Psyc_1420 93 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 71065019 Common - hypothetical protein Psyc_0449 3 None None None 71066093 Common ntrC possible Response regulator receiver protein Psyc_1538 199 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 71065626 Common - hypothetical protein Psyc_1067 44 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 71064986 Common - possible type I restriction-modification system, S subunit Psyc_0416 79 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 71066611 Common gltX glutamyl-tRNA synthetase Psyc_2057 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 71065871 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase Psyc_1314 145 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 71065340 Common - hypothetical protein Psyc_0780 2 None None None 71065172 Common narG nitrate reductase, alpha subunit Psyc_0605 101 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 71065288 Common - choline/carnitine/betaine transporter, BCCT family Psyc_0727 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 71065437 Common hsdM-1 putative type I restriction-modification system, M subunit Psyc_0877 161 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 71064824 Common mutS DNA mismatch repair protein Psyc_0247 200 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 71065195 Common - possible 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase Psyc_0629 121 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 71065502 Common capB putative Cold-shock protein Psyc_0942 180 COG1278 CspC, Cold shock proteins Transcription 71066394 Common - hypothetical protein Psyc_1839 12 None None None 71065474 Common - putative saccharopine dehydrogenase family protein Psyc_0914 50 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 71065137 Common - possible dienelactone hydrolase Psyc_0569 102 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 71066148 Common - probable cytochrome c heme-binding site Psyc_1593 21 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 71065299 Common - possible lysophospholipase Psyc_0738 74 COG2267 PldB, Lysophospholipase Lipid metabolism 71066141 Common tatE twin-arginine translocation protein TatE Psyc_1586 66 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 71064689 Common galU possible glucosephosphate uridylyltransferase Psyc_0108 229 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 71066590 Common - possible cyclic AMP phosphodiesterase Psyc_2036 80 COG1409 Icc, Predicted phosphohydrolases General function prediction only 71065669 Common prpC methylcitrate synthase Psyc_1111 194 COG0372 GltA, Citrate synthase Energy production and conversion 71065467 Nonpathogen - phosphopantethiene-protein transferase domain family protein Psyc_0907 1 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 71064712 Common phhB probable pterin dehydratase Psyc_0131 102 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 71065215 Common - putative lipopolysaccharide biosynthesis tyrosine kinase Psyc_0649 148 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 71065010 Common - probable N-acetylmuramoyl-L-alanine amidase Psyc_0440 4 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 71065382 Common - probable 3-hydroxyacyl-CoA dehydrogenase Psyc_0822 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71065817 Common rpoD putative sigma-70 factor (RpoD) Psyc_1260 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 71065004 Common accD putative acetyl-CoA carboxylase, beta subunit Psyc_0434 217 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 71066306 Common murG probable UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Psyc_1751 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 71065274 Common fba fructose-1,6-bisphosphate aldolase Psyc_0708 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 71065311 Common - putative carboxymuconolactone decarboxylase Psyc_0750 67 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 71065907 Common - putative iron-containing alcohol dehydrogenase Psyc_1352 166 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 71064637 Common - hypothetical protein Psyc_0056 131 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 71066063 Nonpathogen - hypothetical protein Psyc_1508 1 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 71066448 Common secE preprotein translocase subunit SecE Psyc_1893 23 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 71064630 Common - hypothetical protein Psyc_0049 7 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 71065613 Common lysS lysyl-tRNA synthetase Psyc_1054 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 71065702 Common mdcB malonate decarboxylase subunit beta Psyc_1144 200 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 71064623 Nonpathogen holC possible DNA polymerase III, chi subunit Psyc_0042 1 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 71066350 Common ahpF probable alkyl hydroperoxide reductase subunit F Psyc_1795 245 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 71064619 Common rlpA putative lipoprotein A Psyc_0038 134 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 71065640 Common - hypothetical protein Psyc_1081 15 None None None 71066072 Common - probable nucleotidyl transferase Psyc_1517 210 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 71065460 Common mmsA methylmalonate-semialdehyde dehydrogenase Psyc_0900 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 71066676 Common - hypothetical protein Psyc_2122 2 None None None 71065236 Common - probable glycosyl transferase, group 1 Psyc_0670 207 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 71066483 Common pstA ABC phosphate transporter, inner membrane subunit PstA Psyc_1928 222 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 71065040 Nonpathogen - hypothetical protein Psyc_0470 1 None None None 71065075 Common rplR 50S ribosomal protein L18 Psyc_0505 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 71066317 Common - hypothetical protein Psyc_1762 23 None None None 71066490 Common ispA probable geranyltranstransferase Psyc_1935 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 71066516 Common - hypothetical protein Psyc_1962 29 None None None 71066272 Common - putative S-formylglutathione hydrolase Psyc_1717 92 COG0627 COG0627, Predicted esterase General function prediction only 71065538 Nonpathogen - hypothetical protein Psyc_0978 1 None None None 71065176 Common - possible peptidyl-prolyl cis-trans isomerase Psyc_0609 137 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 71066108 Common - putative sigma-54 interacting protein Psyc_1553 163 COG1162 COG1162, Predicted GTPases General function prediction only 71065935 Nonpathogen - hypothetical protein Psyc_1380 1 None None None 71066322 Common - homoserine/homoserine lactone efflux pump, RhtB family Psyc_1767 35 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 71066436 Common pilO probable type IV pilus biogenesis Psyc_1881 45 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 71066088 Common uppS putative Di-trans-poly-cis-decaprenylcistransferase Psyc_1533 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 71066228 Common - hypothetical protein Psyc_1673 33 COG3439 COG3439, Uncharacterized conserved protein Function unknown 71066079 Common tgt queuine tRNA-ribosyltransferase Psyc_1524 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 71065443 Nonpathogen - hypothetical protein Psyc_0883 1 None None None 71065326 Common - possible RNA methylase Psyc_0766 160 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 71065828 Common - hypothetical protein Psyc_1271 76 COG0327 COG0327, Uncharacterized conserved protein Function unknown 71065334 Common - hypothetical protein Psyc_0774 84 COG0348 NapH, Polyferredoxin Energy production and conversion 71064917 Common - hypothetical protein Psyc_0341 8 None None None 71066282 Common priA probable primosomal protein N', helicase Psyc_1727 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 71065185 Common modB ABC molybdenum transporter, inner membrane subunit ModB Psyc_0618 215 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 71066609 Common - hypothetical protein Psyc_2055 2 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 71065797 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Psyc_1240 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 71066478 Common phoB putative two-component response regulator Psyc_1923 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71064864 Common icd2 isocitrate dehydrogenase Psyc_0287 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 71065500 Common - hypothetical protein Psyc_0940 184 COG0661 AarF, Predicted unusual protein kinase General function prediction only 71065509 Common - low molecular weight phosphotyrosine protein phosphatase Psyc_0949 138 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 71065782 Common norM multidrug efflux pump, NorM, MATE family Psyc_1225 183 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 71066374 Common - hypothetical protein Psyc_1819 12 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 71066562 Common adh alcohol dehydrogenase protein Psyc_2008 208 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 71066473 Common - hypothetical protein Psyc_1918 36 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 71065553 Nonpathogen - hypothetical protein Psyc_0993 1 None None None 71065873 Common msbA ABC lipid/multidrug exporter, MsbA, fused ATPase and inner membrane domains Psyc_1316 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 71064782 Common - possible carbon-nitrogen hydrolase Psyc_0202 164 COG0388 COG0388, Predicted amidohydrolase General function prediction only 71065959 Common queA probable S-adenosylmethionine:tRNA -ribosyltransferase-isomerase Psyc_1404 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 71065033 Common - probable phage portal protein Psyc_0463 68 COG4695 COG4695, Phage-related protein Function unknown 71065255 Nonpathogen - hypothetical protein Psyc_0689 1 COG0496 SurE, Predicted acid phosphatase General function prediction only 71065844 Common - probable aldehyde dehydrogenase, NAD(P) dependent family Psyc_1287 90 COG0778 NfnB, Nitroreductase Energy production and conversion 71065550 Nonpathogen - hypothetical protein Psyc_0990 1 None None None 71066365 Common minE probable septum formation topological specificity factor MinE Psyc_1810 42 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 71066050 Common cmkA probable cytidylate kinase Psyc_1495 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 71065656 Common - hypothetical protein Psyc_1098 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 71064761 Common fadH2 probable 2,4-dienoyl-CoA reductase FadH2 Psyc_0181 194 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 71064806 Common - probable endonuclease Psyc_0226 39 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 71065000 Common phrB probable deoxyribodipyrimidine photolyase Psyc_0430 135 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 71066125 Common - posible transcriptinal regulator Psyc_1570 143 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 71065051 Common gatA glutamyl-tRNA (Gln) amidotransferase, A subunit Psyc_0481 220 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 71065496 Common - probable transposase orfA Psyc_0936 9 None None None 71066399 Common - possible transcription regulatory protein ,LysR family Psyc_1844 183 COG0583 LysR, Transcriptional regulator Transcription 71066417 Common - hypothetical protein Psyc_1862 97 COG1981 COG1981, Predicted membrane protein Function unknown 71064855 Common - possible Rhomboid family protein Psyc_0278 12 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 71065354 Common recR recombination protein RecR Psyc_0794 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 71064909 Common rnc putative dsRNA specific ribonuclease III Psyc_0333 215 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 71066404 Common - hypothetical protein Psyc_1849 6 None None None 71065534 Common trpG putative anthranilate synthase component II Psyc_0974 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 71065038 Common - hypothetical protein Psyc_0468 9 COG3378 COG3378, Predicted ATPase General function prediction only 71064698 Common panC possible pantoate-beta-alanine ligase Psyc_0117 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 71065770 Common rfbD putative dTDP-4-dehydrorhamnose reductase Psyc_1213 164 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 71064589 Common - putative SAM-dependent methyltransferase Psyc_0008 28 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 71065988 Nonpathogen - hypothetical protein Psyc_1433 1 None None None 71065406 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Psyc_0846 149 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 71065676 Common - C factor cell-cell signaling protein Psyc_1118 85 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71065204 Common - possible acyltransferase family protein Psyc_0638 105 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 71065597 Common - ABC peptide transporter, periplasmic solute-binding protein Psyc_1037 125 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 71066388 Common dfp probable phosphopantothenoylcysteine decarboxyase Psyc_1833 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 71065710 Common - flavin monoamine oxidase related protein Psyc_1152 29 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 71066381 Nonpathogen ccmD cytochrome c biogenesis protein, CcmD Psyc_1826 1 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 71066046 Common pyrF putative Orotidine 5'-phosphate decarboxylase Psyc_1491 169 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 71065245 Common - hypothetical protein Psyc_0679 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 71066319 Common - hypothetical protein Psyc_1764 8 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 71066464 Common - probable Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase family protein Psyc_1909 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 71065344 Common - hypothetical protein Psyc_0784 45 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 71065304 Common - probable acyl-CoA thioester hydrolase-related protein Psyc_0743 138 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 71066454 Common fabB probable beta-ketoacyl-ACP synthase I Psyc_1899 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71066668 Common - ABC efflux transporter, ATPase subunit Psyc_2114 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 71065929 Common - probable patatin-related protein Psyc_1374 45 COG3621 COG3621, Patatin General function prediction only 71065063 Common rpsS 30S ribosomal protein S19 Psyc_0493 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 71065897 Nonpathogen - hypothetical protein Psyc_1340 1 None None None 71065777 Nonpathogen - hypothetical protein Psyc_1220 1 None None None 71065164 Common - probable Ferredoxin--NADP(+) reductase Psyc_0597 115 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 71066048 Common - putative histone-like bacterial DNA-binding protein Psyc_1493 197 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 71064661 Common - hypothetical protein Psyc_0080 61 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 71065724 Common - hypothetical protein Psyc_1166 13 None None None 71066174 Common - hypothetical protein Psyc_1619 2 None None None 71066135 Nonpathogen - hypothetical protein Psyc_1580 1 None None None 71065412 Common - gluconolactonase Psyc_0852 70 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 71064798 Common gloA probable lactoylglutathione lyase Psyc_0218 103 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 71065458 Common - putative AMP-dependent synthetase and ligase family protein Psyc_0898 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71065373 Common greA GreA transcription elongation factor Psyc_0813 204 COG0782 GreA, Transcription elongation factor Transcription 71066505 Common - probable peptide methionine sulfoxide reductase Psyc_1950 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 71066648 Common parE DNA topoisomerase IV subunit B Psyc_2094 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 71066693 Common fmt putative methionyl-tRNA formyltransferase Psyc_2139 219 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 71064733 Common - hypothetical protein Psyc_0153 53 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 71064791 Common rpsU 30S ribosomal protein S21 Psyc_0211 103 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 71064582 Common dnaA probable bacterial chromosomal replication initiator protein Psyc_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 71065375 Common carA carbamoyl phosphate synthase small subunit Psyc_0815 234 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 71066594 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Psyc_2040 202 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 71065578 Common - hypothetical protein Psyc_1018 10 None None None 71066511 Common - electron transfer flavoprotein-ubiquinone oxidoreductase Psyc_1956 107 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 71065737 Common - hypothetical protein Psyc_1179 13 None None None 71064778 Nonpathogen - hypothetical protein Psyc_0198 1 None None None 71064910 Common era GTP-binding protein Era Psyc_0334 219 COG1159 Era, GTPase General function prediction only 71065920 Common - probable fatty acid desaturase Psyc_1365 67 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 71066119 Common - possible methyltransferase Psyc_1564 209 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 71066295 Common - hypothetical protein Psyc_1740 87 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 71065205 Common - transposase, IS3/IS911family Psyc_0639 61 None None None 71064594 Nonpathogen - hypothetical protein Psyc_0013 1 None None None 71065950 Common - possible transcriptional regulator, TetR family Psyc_1395 91 COG1309 AcrR, Transcriptional regulator Transcription 71065624 Common cysG probable uroporphiryn-III C-methyltransferase/siroheme synthase Psyc_1065 205 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 71065103 Common etfA electron transportr flavoprotein, alpha subunit Psyc_0533 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 71065838 Nonpathogen - hypothetical protein Psyc_1281 1 COG4392 COG4392, Predicted membrane protein Function unknown 71066196 Common pyrG CTP synthetase Psyc_1641 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 71066338 Common - probable zinc metallopeptidase, family M48 Psyc_1783 132 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 71066128 Common rplU 50S ribosomal protein L21 Psyc_1573 206 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 71064826 Nonpathogen - hypothetical protein Psyc_0249 1 None None None 71066680 Common hemN coproporphyrinogen III oxidase Psyc_2126 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 71065338 Common - putative cytochrome c oxidase cbb3-type Psyc_0778 135 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 71066535 Nonpathogen - hypothetical protein Psyc_1981 1 None None None 71066146 Common copA probable copper-resistance protein CopA Psyc_1591 118 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 71065192 Common - hypothetical protein Psyc_0626 95 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 71065878 Common gidB probable glucose inhibited division protein Psyc_1321 195 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 71064821 Common - hypothetical protein Psyc_0243 43 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065836 Common dinF DNA-damage-inducible protein F, Dinf, MATE family Psyc_1279 120 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 71066038 Common - probable Histidine triad (HIT) family protein Psyc_1483 65 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 71066622 Common hisF putative imidazoleglycerol phosphate synthase, cyclase subunit Psyc_2068 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 71066084 Common - putative bacterial surface antigen (D15) Psyc_1529 161 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 71065054 Common mreC possible rod shape-determining protein MreC Psyc_0484 156 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 71064718 Common - probable acyl-CoA dehydrogenase Psyc_0137 152 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71066507 Common - probable transglycolase Psyc_1952 101 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 71066006 Common - probable Hydantoinase/oxoprolinase family Psyc_1451 115 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71064642 Common coaE probable dephospho-CoA kinase Psyc_0061 206 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 71064941 Common - probable thioredoxin protein Psyc_0365 38 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 71066692 Common - hypothetical protein Psyc_2138 204 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 71065425 Common - hypothetical protein Psyc_0865 13 None None None 71065820 Common nrdA ribonucleotide-diphosphate reductase subunit alpha Psyc_1263 212 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 71066646 Common - possible Short-chain dehydrogenase/reductase Psyc_2092 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71066304 Common ddlB probable D-alanine--D-alanine ligase B Psyc_1749 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 71065413 Common - probable iron-containing alcohol dehydrogenase Psyc_0853 177 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 71065330 Common - hypothetical protein Psyc_0770 2 None None None 71065165 Common - hypothetical protein Psyc_0598 2 None None None 71065501 Common aroQ 3-dehydroquinate dehydratase Psyc_0941 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 71066041 Common - possible oxidoreductase Psyc_1486 56 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 71065788 Common - major facilitator superfamily (MFS) tranporter Psyc_1231 82 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71066323 Common argE acetylornithine deacetylase Psyc_1768 209 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 71066194 Nonpathogen - hypothetical protein Psyc_1639 1 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 71065742 Common - probable prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyl transferase Psyc_1184 231 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 71066517 Common - TRAP-T family transporter, large inner membrane subunit Psyc_1963 124 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 71065571 Common - hypothetical protein Psyc_1011 8 None None None 71064730 Common - hypothetical protein Psyc_0149 2 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 71066472 Common - hypothetical protein Psyc_1917 119 COG2353 COG2353, Uncharacterized conserved protein Function unknown 71064709 Nonpathogen - hypothetical protein Psyc_0128 1 None None None 71064957 Common - hypothetical protein Psyc_0382 34 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 71065132 Common pssA putative CDP-diacylglycerol--serine O-phosphatidyltransferase Psyc_0564 154 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 71065966 Common - hypothetical protein Psyc_1411 2 None None None 71064710 Common - hypothetical protein Psyc_0129 47 COG3268 COG3268, Uncharacterized conserved protein Function unknown 71065089 Common rpmF 50S ribosomal protein L32 Psyc_0519 13 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 71065283 Common - bifunctional HTH-domain containing protein/aminotransferase Psyc_0717 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 71066629 Common - putative nickel-dependent hydrogenase cytochrome b-type subunit Psyc_2075 51 COG3658 COG3658, Cytochrome b Energy production and conversion 71065405 Common - hypothetical protein Psyc_0845 24 None None None 71065801 Common trmU putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Psyc_1244 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 71065560 Common - phage protein Psyc_1000 10 COG5556 COG5556, Uncharacterized conserved protein Function unknown 71064948 Nonpathogen - hypothetical protein Psyc_0372 1 None None None 71065092 Common acpP probable Acyl carrier protein (ACP) Psyc_0522 206 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71065044 Nonpathogen - hypothetical protein Psyc_0474 1 None None None 71065139 Common - probable Zn-dependent hydrolase protein Psyc_0571 33 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 71065017 Common - possible RNA-directed DNA polymerase (Reverse transcriptase) Psyc_0447 75 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 71064653 Nonpathogen - hypothetical protein Psyc_0072 1 None None None 71066355 Common - hypothetical protein Psyc_1800 131 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 71066392 Common - hypothetical protein Psyc_1837 104 COG0730 COG0730, Predicted permeases General function prediction only 71065289 Common betA choline dehydrogenase Psyc_0728 91 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 71065851 Common - probable aldehyde dehydrogenase, NAD(P) dependent family Psyc_1294 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 71065717 Common - hypothetical protein Psyc_1159 25 None None None 71064614 Nonpathogen - hypothetical protein Psyc_0033 1 None None None 71065248 Common gcpE putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Psyc_0682 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 71066261 Common - possible metal (zinc) dependent glycoprotease, M22 family Psyc_1706 155 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 71066014 Common - probable transposase IS3/IS150/IS904 family Psyc_1459 143 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065755 Nonpathogen - hypothetical protein Psyc_1197 1 None None None 71065569 Common - putative bacteriophage (putative tail completion) protein Psyc_1009 4 COG5005 COG5005, Mu-like prophage protein gpG General function prediction only 71065703 Common mdcD putative malonate decarboxylase delta subunit Psyc_1145 23 None None None 71065320 Common terA probable tellurium resistance protein Psyc_0760 24 COG4110 COG4110, Uncharacterized protein involved in stress response General function prediction only 71066145 Common copB possible copper-resistance protein CopB Psyc_1590 43 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 71064686 Common sucC succinyl-CoA synthetase subunit beta Psyc_0105 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 71065263 Common - probable glutathione S-transferase Psyc_0697 57 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71065214 Common epsP low molecular weight phosphotyrosine protein phosphatase Psyc_0648 111 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 71065150 Common uvrD putative ATP-dependent DNA helicase, UvrD/REP family Psyc_0583 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 71065798 Common - hypothetical protein Psyc_1241 2 None None None 71065439 Common - probable Death-on-curing family protein Psyc_0879 67 COG3943 COG3943, Virulence protein General function prediction only 71066405 Common valS valyl-tRNA synthetase Psyc_1850 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71064916 Common mscL large-conductance mechanosensitive channel MscL Psyc_0340 135 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 71066613 Common - putative amino acid efflux pump, RhtB/LysE family Psyc_2059 122 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 71065472 Common - probable ribonuclease HII Psyc_0912 224 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 71065059 Common rplC 50S ribosomal protein L3 Psyc_0489 242 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 71064803 Common - putative wax ester synthase Psyc_0223 26 None None None 71065995 Common - putative cytochrome c, class I Psyc_1440 69 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 71065767 Common - hypothetical protein Psyc_1209 7 None None None 71065511 Common ilvA threonine dehydratase Psyc_0951 218 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 71065631 Common cysT ABC sulfate/thiosulfate transporter, inner membrane subunit CysT Psyc_1072 207 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 71064894 Common smc probable chromosome segregation protein (SMC family) Psyc_0318 205 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 71064972 Nonpathogen - hypothetical protein Psyc_0397 1 None None None 71064815 Common - possible pilus assembly protein tip-associated adhesin PilY1 Psyc_0237 25 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 71064960 Common rimI possible ribosomal-protein-alanine acetyltransferase Psyc_0385 149 COG0456 RimI, Acetyltransferases General function prediction only 71065030 Common - hypothetical protein Psyc_0460 3 None None None 71066420 Common rph ribonuclease PH 3' exoribonuclease Psyc_1865 193 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 71065608 Common - divalent Anion:Na+ Symporter, DASS family Psyc_1048 137 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 71065696 Common ppc putative phosphoenolpyruvate carboxylase Psyc_1138 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 71066630 Common - probable two-component transcriptional response regulator (ompR family) Psyc_2076 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71066341 Common - hypothetical protein Psyc_1786 2 None None None 71064887 Common - enoyl-CoA hydratase Psyc_0310 177 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 71066027 Common purH phosphoribosylaminoimidazolecarboxamide formyltransferase Psyc_1472 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 71065979 Common sspB ClpXP protease specificity-enhancing factor Psyc_1424 64 COG2969 SspB, Stringent starvation protein B General function prediction only 71066602 Common - hypothetical protein Psyc_2048 48 COG1434 COG1434, Uncharacterized conserved protein Function unknown 71065385 Common - hypothetical protein Psyc_0825 6 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 71066249 Nonpathogen - hypothetical protein Psyc_1694 1 None None None 71065494 Common ftsY cell division transporter substrate-binding protein FtsY Psyc_0934 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 71064848 Common - hypothetical protein Psyc_0271 114 COG0628 PerM, Predicted permease General function prediction only 71064880 Common gltI ABC glutamate/aspartate transporter, periplasmic binding protein GltI Psyc_0303 162 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 71064991 Common - possible chalcone synthase Psyc_0421 38 COG3424 BcsA, Predicted naringenin-chalcone synthase Secondary metabolites biosynthesis, transport, and catabolism 71065087 Common - hypothetical protein Psyc_0517 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 71065479 Common mutL probable DNA mismatch repair enzyme Psyc_0919 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 71065627 Common cysI putative sulfite reductase, beta subunit Psyc_1068 171 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 71064602 Nonpathogen - hypothetical protein Psyc_0021 4 COG2044 COG2044, Predicted peroxiredoxins General function prediction only 71064700 Common - hypothetical protein Psyc_0119 10 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 71066540 Common hepA ATP-dependent helicase HepA Psyc_1986 119 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 71066458 Common hisG ATP phosphoribosyltransferase catalytic subunit Psyc_1903 202 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 71064669 Common argH argininosuccinate lyase Psyc_0088 236 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 71065867 Common - acetyl-CoA acetyltransferase Psyc_1310 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 71065098 Common ilvH putative acetolactate synthase, small subunit Psyc_0528 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 71065915 Common guaB inosine 5'-monophosphate dehydrogenase Psyc_1360 237 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 71065483 Common - probable phosphatase Psyc_0923 102 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 71066166 Common - possible DNA helicase: AAA ATPase Psyc_1611 47 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 71064790 Common - hypothetical protein Psyc_0210 152 COG1610 COG1610, Uncharacterized conserved protein Function unknown 71065769 Common rffG dTDP-glucose 4,6-dehydratase Psyc_1212 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 71064961 Common - putative transcriptional regulatory protein, MerR family Psyc_0386 48 COG0789 SoxR, Predicted transcriptional regulators Transcription 161611072 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Psyc_1286 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 71065730 Common - acyl-CoA dehydrogenase Psyc_1172 167 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71064609 Common dapB probable dihydrodipicolinate reductase Psyc_0028 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 71065709 Common - possible cytochrome c alcohol dehydrogenase subunit Psyc_1151 55 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 71065478 Common - hypothetical protein Psyc_0918 201 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 71066549 Common pheT phenylalanyl-tRNA synthetase, beta subunit Psyc_1995 240 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 71065148 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase Psyc_0581 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 71064977 Common metH B12-dependent methionine synthase Psyc_0403 177 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 71064660 Common - hypothetical protein Psyc_0079 24 None None None 71065518 Common alr alanine racemase Psyc_0958 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 71066559 Common - hypothetical protein Psyc_2005 20 COG3686 COG3686, Predicted membrane protein Function unknown 71065547 Nonpathogen - hypothetical protein Psyc_0987 2 None None None 71065977 Common - probable ubiquinol cytochrome c1 reductase Psyc_1422 44 COG2857 CYT1, Cytochrome c1 Energy production and conversion 71065275 Common ruvA putative Holliday junction DNA helicase RuvA Psyc_0709 205 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 71065039 Common - possible bacteriophage DNA primase Psyc_0469 41 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 71065392 Common - hypothetical protein Psyc_0832 7 None None None 71066550 Common pheS phenylalanyl-tRNA synthetase, alpha subunit Psyc_1996 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 71066101 Common - ABC iron transporter, inner membrane subunit Psyc_1546 188 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 71066238 Common ssb putative single-strand binding protein Psyc_1683 211 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 71065115 Common - hypothetical protein Psyc_0547 31 COG4325 COG4325, Predicted membrane protein Function unknown 71065890 Common sthA soluble pyridine nucleotide transhydrogenase Psyc_1333 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 71065722 Common dgkA probable diacylglycerol kinase Psyc_1164 74 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 71066360 Common - outer membrane protein, OmpA/OmpF family Psyc_1805 171 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 71066176 Common - hypothetical protein Psyc_1621 3 COG3110 COG3110, Uncharacterized protein conserved in bacteria Function unknown 71064675 Common - recombination factor protein RarA Psyc_0094 238 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 71066569 Common - hypothetical protein Psyc_2015 18 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 71065606 Common - putative transmembrane protein of unknown function Psyc_1046 43 COG3619 COG3619, Predicted membrane protein Function unknown 71064584 Common recF possible RecF protein Psyc_0003 161 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 71065499 Common - probable potassium channel, VIC family Psyc_0939 94 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 71064988 Common gst probable glutathione S-transferase Psyc_0418 104 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 71065899 Common - hypothetical protein Psyc_1344 6 None None None 71065452 Common - hypothetical protein Psyc_0892 37 COG1309 AcrR, Transcriptional regulator Transcription 71066310 Common - possible nucleoside-diphosphate-sugar epimerase Psyc_1755 70 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 71066269 Nonpathogen - hypothetical protein Psyc_1714 1 None None None 71066296 Common - hypothetical protein Psyc_1741 4 None None None 71065270 Common - probable D-alanyl-D-alanine carboxypeptidase Psyc_0704 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 71066153 Common - hlyD family secretion protein Psyc_1598 138 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 71064903 Common - putative 4Fe-4S ferredoxin Psyc_0327 128 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 71066522 Common ydfG probable glucose/ribitol dehydrogenase (short-chain dehyrogenase/reductase family) Psyc_1968 238 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 71065923 Common cca probable tRNA nucleotidyltransferase Psyc_1368 209 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 71065620 Common purD putative phosphoribosylamine--glycine ligase Psyc_1061 232 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 71065002 Common trpB tryptophan synthase subunit beta Psyc_0432 227 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 71065842 Common - possible phospho-histidine phosphatase Psyc_1285 12 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 71065545 Common - possible DNA binding protein , Helix turn helix motif Psyc_0985 6 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 71065858 Common - betaine/choline/carnitine/glycine transporter, BCCT family Psyc_1301 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 71064936 Common - hypothetical protein Psyc_0360 116 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 71065677 Common - hypothetical protein Psyc_1119 9 None None None 71065117 Common trpR putative Trp repressor binding protein Psyc_0549 99 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 71065559 Common - possible transposase Psyc_0999 9 None None None 71064680 Common sdhD succinate dehydrogenase hydrophobic membrane anchor subunit Psyc_0099 50 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 71065146 Common - hypothetical protein Psyc_0578 97 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 71065378 Common - hypothetical protein Psyc_0818 74 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 71066466 Common - hypothetical protein Psyc_1911 57 COG0316 IscA, Uncharacterized conserved protein Function unknown 71065346 Common sppA probable signal peptide peptidase Psyc_0786 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 71064692 Common cpsG probable phosphomannomutase Psyc_0111 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 71064866 Common ubiC possible chorismate lyase Psyc_0289 24 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 71066060 Common gapA glyceraldehyde-3-phosphate dehydrogenase Psyc_1505 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 71065939 Common - hypothetical protein Psyc_1384 7 None None None 71064726 Common tmk probable thymidylate kinase Psyc_0145 226 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 71064745 Common proC probable 1-pyrroline-5-carboxylate reductase Psyc_0165 211 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 71064738 Common dadA probable D-amino acid dehydrogenase subunit Psyc_0158 97 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 71064889 Common mvaB probable hydroxymethylglutaryl-coenzyme A lyase Psyc_0312 195 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 71065957 Common - possible Pirin family proteins Psyc_1402 117 COG1741 COG1741, Pirin-related protein General function prediction only 71066662 Common nqrE Na(+)-translocating NADH-quinone reductase subunit E Psyc_2108 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 71065401 Common - possible monoamine oxidase Psyc_0841 37 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 71064926 Common rpsB 30S ribosomal protein S2 Psyc_0350 231 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 71065306 Common - hypothetical protein Psyc_0745 3 None None None 71066440 Common - hypothetical protein Psyc_1885 3 None None None 71065712 Common - hypothetical protein Psyc_1154 35 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 71065535 Common glnA putative glutamine synthetase class-I Psyc_0975 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 71065415 Common - 23S rRNA pseudouridine synthase F Psyc_0855 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 71066456 Common - histidinol-phosphate aminotransferase Psyc_1901 232 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 71065073 Common rpsH 30S ribosomal protein S8 Psyc_0503 220 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 71065671 Common - hypothetical protein Psyc_1113 13 None None None 71066496 Common clpP putative ATP-dependent of ClpP protease, proteolytic subunit Psyc_1941 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 71065202 Common - transposase, IS3/IS911family Psyc_0636 61 None None None 71064853 Common purE phosphoribosylaminoimidazole carboxylase, catalytic subunit Psyc_0276 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 71066585 Common atpI possible ATP synthase protein, subunit I Psyc_2031 7 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 71064914 Common oprF probable outer membrane protein Psyc_0338 158 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 71065521 Common ksgA dimethyladenosine transferase Psyc_0961 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 71064785 Common thiS possible sulfur transfer protein involved in thiamine biosynthesis Psyc_0205 6 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 71065981 Common - probable ATP-binding protein Psyc_1426 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 71066367 Nonpathogen - hypothetical protein Psyc_1812 1 None None None 71065230 Common - probable Glycosyl transferase, group 1 Psyc_0664 185 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 71064928 Common - possible lytic transglycosylase Psyc_0352 172 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 71065658 Common - possible allophanate hydrolase subunit 1 Psyc_1100 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 71065507 Common - hypothetical protein Psyc_0947 12 COG1434 COG1434, Uncharacterized conserved protein Function unknown 71066475 Common - hypothetical protein Psyc_1920 142 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 71065611 Common - 3-oxoacyl-(acyl carrier protein) synthase III Psyc_1052 197 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 71066386 Common - hypothetical protein Psyc_1831 65 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 71066172 Common tktA transketolase Psyc_1617 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 71066434 Common pilQ fimbrial assembly protein PilQ Psyc_1879 140 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 71065691 Common - hypothetical protein Psyc_1133 34 COG2259 COG2259, Predicted membrane protein Function unknown 71065795 Common - putative bacterial luciferase Psyc_1238 112 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 71064873 Common - ABC basic amino acid transporter, periplasmic binding protein Psyc_0296 178 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 71065459 Common prpE putative AMP-dependent synthetase and ligase family protein Psyc_0899 219 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 71065829 Common - probable soluble lytic transglycosylase Psyc_1272 108 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 71065815 Common - possible lipoprotein (DUF0169) Psyc_1258 126 COG4105 ComL, DNA uptake lipoprotein General function prediction only 71066592 Common - putative tRNA synthetase domain protein Psyc_2038 245 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 71064907 Common lepB possible signal peptidase Psyc_0331 206 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 71066560 Common - hypothetical protein Psyc_2006 87 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 71064624 Common pepA probable cytosol aminopeptidase Psyc_0043 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 71065209 Common - hypothetical protein Psyc_0643 8 None None None 71065663 Common - probable acyltransferase Psyc_1105 29 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 71065543 Nonpathogen - hypothetical protein Psyc_0983 1 None None None 71065537 Common - hypothetical protein Psyc_0977 25 COG3471 COG3471, Predicted periplasmic/secreted protein Function unknown 71065633 Common cysA ABC sulfate/thiosulfate transporter, ATPase subunit CysA Psyc_1074 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 71066271 Common - hypothetical protein Psyc_1716 25 None None None 71066209 Common lldA L-lactate dehydrogenase (cytochrome) Psyc_1654 118 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 71065512 Common - putative transcriptional regulatory protein, ArsR family Psyc_0952 67 COG0640 ArsR, Predicted transcriptional regulators Transcription 71065594 Common - probable phage integrase Psyc_1034 104 COG0582 XerC, Integrase DNA replication, recombination, and repair 71065173 Common narH nitrate reductase, beta subunit Psyc_0606 147 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 71066659 Common nqrB Na(+)-translocating NADH-quinone reductase subunit B Psyc_2105 76 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 71065028 Nonpathogen - hypothetical protein Psyc_0458 1 None None None 71066280 Common spoT guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase:(p)ppGpp synthetase II Psyc_1725 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 71065199 Common - hypothetical protein Psyc_0633 66 COG4111 COG4111, Uncharacterized conserved protein General function prediction only 71066674 Common hisH imidazole glycerol phosphate synthase subunit HisH Psyc_2120 215 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 71065313 Common - possible enoyl-CoA hydratase Psyc_0753 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 71065811 Common - probable TRP repressor binding protein Psyc_1254 90 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 71066467 Common - possible carboxymuconolactone decarboxylase family protein Psyc_1912 72 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 71065046 Nonpathogen - hypothetical protein Psyc_0476 1 None None None 71065910 Common - hypothetical protein Psyc_1355 4 None None None 71065167 Common - hypothetical protein Psyc_0600 4 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 71066223 Common - probable anthranilate synthase, component II Psyc_1668 231 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 71066181 Common - probable Transcription regulator, LysR family Psyc_1626 100 COG0583 LysR, Transcriptional regulator Transcription 71066102 Common - ABC iron transporter, periplasmic binding protein Psyc_1547 126 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 71065427 Common - hypothetical protein Psyc_0867 10 None None None 71066241 Nonpathogen - hypothetical protein Psyc_1686 1 None None None 71065905 Common - putative aldehyde dehydrogenase Psyc_1350 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 71065735 Common dnaE putative DNA polymerase III, alpha subunit Psyc_1177 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 71066066 Common - probable Major facilitator superfamily (MFS) transporter Psyc_1511 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 71066373 Common pilG possible two component reponse regulator Psyc_1818 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71065619 Common - possible ABC1 protein family Psyc_1060 182 COG0661 AarF, Predicted unusual protein kinase General function prediction only 71066078 Common asd aspartate-semialdehyde dehydrogenase Psyc_1523 198 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 71064896 Common lig probable NAD dependent DNA ligase Psyc_0320 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 71066287 Common recA recombinase A Psyc_1732 228 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 71065930 Common - probable transposase, ISSod6 Psyc_1375 74 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066126 Common lolA probable outer membrane lipoprotein carrier Psyc_1571 72 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 71065294 Common recJ probable single-stranded DNA-specific exonuclease Psyc_0733 193 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 71065182 Common moaD probable molybdopterin converting factor, small subunit Psyc_0615 6 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 71064756 Common hemA probable glutamyl-tRNA reductase Psyc_0176 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 71065849 Common - hypothetical protein Psyc_1292 5 None None None 71066259 Common - hypothetical protein Psyc_1704 51 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 71066612 Nonpathogen - hypothetical protein Psyc_2058 1 None None None 71066531 Common corC putative magnesium and cobalt efflux protein, CorC Psyc_1977 218 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 71064801 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase Psyc_0221 205 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 71066278 Common gmk probable guanylate kinase Psyc_1723 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 71066116 Common ccmF probable cytochrome c-type biogenesis protein Psyc_1561 119 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 71065188 Common - hypothetical protein Psyc_0621 41 COG4125 COG4125, Predicted membrane protein Function unknown 71066651 Common - hypothetical protein Psyc_2097 43 None None None 71065648 Nonpathogen - hypothetical protein Psyc_1090 3 None None None 71066349 Common - hypothetical protein Psyc_1794 35 COG3453 COG3453, Uncharacterized protein conserved in bacteria Function unknown 71064659 Common prlC probable oligopeptidase A Psyc_0078 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 71065961 Nonpathogen - hypothetical protein Psyc_1406 2 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 71064634 Common - hypothetical protein Psyc_0053 61 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 71066326 Common - hypothetical protein Psyc_1771 3 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 71065587 Nonpathogen - hypothetical protein Psyc_1027 1 None None None 71065144 Common leuS leucyl-tRNA synthetase bacterial/mitochondrial, class Ia Psyc_0576 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065249 Common hisS histidyl-tRNA synthetase Psyc_0683 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71066344 Common - probable thioredoxin Psyc_1789 230 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 71066489 Common fadB multifunctional fatty acid oxidation complex subunit alpha Psyc_1934 184 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 71065152 Common nuoB NADH dehydrogenase subunit B Psyc_0585 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 71065242 Common - ATP phosphoribosyltransferase regulatory subunit Psyc_0676 123 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 71066321 Common miaB putative tRNA-i(6)A37 modification enzyme MiaB Psyc_1766 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 71066598 Common amtB ammonium transporter, AmtB Psyc_2044 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 71066689 Common dprA possible DNA processing protein Psyc_2135 210 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 71065357 Common - probable nitroreductase family protein Psyc_0797 81 COG0778 NfnB, Nitroreductase Energy production and conversion 71065719 Common - probable integral membrane protein Psyc_1161 63 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 71066482 Common pstC ABC phosphate transporter, inner membrane subunit PstC Psyc_1927 222 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 71066031 Common - possible transcriptional regulators protein family Psyc_1476 174 COG1959 COG1959, Predicted transcriptional regulator Transcription 71064788 Common - hypothetical protein Psyc_0208 42 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 71066643 Common argA N-acetylglutamate synthase Psyc_2089 195 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 71065094 Common - putative 4Fe-4S ferredoxin Psyc_0524 134 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 71065403 Nonpathogen - hypothetical protein Psyc_0843 1 None None None 71065365 Common gcdH putative glutaryl-CoA dehydrogenase Psyc_0805 157 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71064817 Common pilE possible pilus assembly protein PilE Psyc_0239 12 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 71065739 Nonpathogen - hypothetical protein Psyc_1181 1 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 71065576 Nonpathogen - hypothetical protein Psyc_1016 1 None None None 71064655 Common pnp polynucleotide phosphorylase/polyadenylase Psyc_0074 240 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 71065490 Common - hypothetical protein Psyc_0930 5 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 71065015 Common - probable prophage LambdaSo, tail assembly protein K Psyc_0445 15 COG1310 COG1310, Predicted metal-dependent protease of the PAD1/JAB1 superfamily General function prediction only 71066113 Common cycH possible cytochrome c-type biogenesis protein Psyc_1558 44 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 71065464 Common mmsB putative 3-hydroxyisobutyrate dehydrogenase: Psyc_0904 176 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 71065591 Common - hypothetical protein Psyc_1031 2 None None None 71066519 Common - TRAP-T family transporter, periplasmic substrate binding subunit Psyc_1965 111 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 71065753 Common - Xanthine/uracil symporter, NCS2 family Psyc_1195 122 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 71065876 Common parB ParB family binding protein Psyc_1319 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 71065629 Common - ABC sulfate/thiosulfate transporter, periplasmic solute-binding protein Psyc_1070 91 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 71065008 Common - hypothetical protein Psyc_0438 16 COG3782 COG3782, Uncharacterized protein conserved in bacteria Function unknown 71065190 Common - hypothetical protein Psyc_0624 39 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 71066018 Common - hypothetical protein Psyc_1463 15 None None None 71064841 Common omlA possible outer membrane lipoprotein OmlA Psyc_0264 61 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 71065940 Nonpathogen - hypothetical protein Psyc_1385 1 None None None 71066302 Common ftsQ possible cell division protein FtsQ Psyc_1747 55 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 71065327 Common - small-conductance mechanosensitive ion channel Psyc_0767 203 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 71065622 Common sbcC possible exonuclease SbcCD, C subunit Psyc_1063 126 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 71066390 Common fadE acyl-CoA dehydrogenase Psyc_1835 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71064716 Common - hypothetical protein Psyc_0135 121 COG2606 EbsC, Uncharacterized conserved protein Function unknown 71066004 Common - probable Acetone carboxylase beta subunit Psyc_1449 117 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71066362 Common - hypothetical protein Psyc_1807 8 None None None 71066179 Common purM phosphoribosylaminoimidazole synthetase Psyc_1624 231 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 71065423 Common - probable transposase orfAB Psyc_0863 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065336 Nonpathogen - probable cytochrome C, oxidase component Psyc_0776 1 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 71066579 Common atpG F0F1 ATP synthase subunit gamma Psyc_2025 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 71064892 Common birA probable biotin-(acetyl CoA carboxylase) holoenzyme synthetase Psyc_0315 116 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 71065296 Common - hypothetical protein Psyc_0735 11 None None None 71065211 Common - probable transposase IS30 family Psyc_0645 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065949 Common - hypothetical protein Psyc_1394 54 COG2128 COG2128, Uncharacterized conserved protein Function unknown 71065321 Common - probable tellurium resitance protein TerZ Psyc_0761 28 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 71064794 Common ygjD probable O-sialoglycoprotein endopeptidase protein Psyc_0214 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 71065970 Common - Na+/proline symporter, SSS family Psyc_1415 186 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 71066670 Nonpathogen - hypothetical protein Psyc_2116 1 None None None 71065759 Common - short chain dehydrogenase Psyc_1201 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 71066255 Common - hypothetical protein Psyc_1700 2 None None None 71065548 Nonpathogen - hypothetical protein Psyc_0988 3 None None None 71065790 Common moeB probable molybdopterin biosynthesis enzyme Psyc_1233 222 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 71065272 Common pgk phosphoglycerate kinase Psyc_0706 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 71064922 Common cysM cysteine synthase B Psyc_0346 223 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 71065360 Common - hypothetical protein Psyc_0800 17 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 71065371 Common - possible glycosyl transferase Psyc_0811 50 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 71064899 Nonpathogen - hypothetical protein Psyc_0323 1 None None None 71064970 Common glnD probable protein-P-II uridylyltransferase Psyc_0395 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 71066694 Common ribE riboflavin synthase subunit alpha Psyc_2140 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 71065917 Common btuR probable cobalmin adenosyltransferase Psyc_1362 129 COG2096 COG2096, Uncharacterized conserved protein Function unknown 71065107 Common - putative transposase OrfA, IS3/IS911family Psyc_0539 29 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71064590 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein Psyc_0009 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 71065869 Common pilZ probable type IV fimbriae assembly protein Psyc_1312 33 COG3215 PilZ, Tfp pilus assembly protein PilZ Cell motility and secretion / Intracellular trafficking and secretion 71064705 Common - hypothetical protein Psyc_0124 24 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 71066634 Common - possible apbE lipoprotein family Psyc_2080 99 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 71066604 Common rrmA probable rRNA (guanine-N1-)-methyltransferase Psyc_2050 54 None None None 71064875 Common - ABC basic amino acid transporter, inner membrane subunit Psyc_0298 173 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 71065239 Common folD putative tetrahydrofolate dehydrogenase/cyclohydrolase Psyc_0673 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 71064702 Common ubiG 3-demethylubiquinone-9 3-methyltransferase Psyc_0121 172 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 71064697 Common panB probable ketopantoate hydroxymethyltransferase Psyc_0116 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 71065127 Common - hypothetical protein Psyc_0559 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 71066547 Nonpathogen - hypothetical protein Psyc_1993 1 None None None 71064950 Common - hypothetical protein Psyc_0374 68 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 71065581 Nonpathogen - hypothetical protein Psyc_1021 1 None None None 71065701 Common mdcC putative malonate decarboxylase gamma subunit Psyc_1143 28 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 71065860 Nonpathogen - hypothetical protein Psyc_1303 1 None None None 71064595 Common - probable 2-nitropropane dioxygenase protein Psyc_0014 135 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 71065720 Common - putative two component system regulatory protein Psyc_1162 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71064684 Common sucB dihydrolipoyllysine succinyltransferase component of 2-oxoglutarate dehydrogenase complex Psyc_0103 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 71066575 Common - signal transduction histidine kinase sensor Psyc_2021 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 71066615 Common acnA aconitate hydratase Psyc_2061 222 COG1048 AcnA, Aconitase A Energy production and conversion 71064967 Common - possible nucleotidyltransferase Psyc_0392 64 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 71066557 Common - possible DNA helicase Psyc_2003 31 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 71065224 Common - hypothetical protein Psyc_0658 7 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 71065261 Common - hypothetical protein Psyc_0695 9 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 71065937 Common - possible Serine/threonine phosphatase, family 2C Psyc_1382 14 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 71066533 Common - hypothetical protein Psyc_1979 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 71066624 Common nusB probable NusB antitermination factor Psyc_2070 84 COG0781 NusB, Transcription termination factor Transcription 71066211 Common - putative outer membrane protein/scaffolding protein MipA Psyc_1656 34 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 71066244 Common - hypothetical protein Psyc_1689 3 None None None 71066247 Common - possible ThrE family exporter, small subunit Psyc_1692 27 COG3610 COG3610, Uncharacterized conserved protein Function unknown 71064843 Common pilU putative twitching motility protein PilU Psyc_0266 169 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 71066422 Common fadD probable long-chain fatty acid CoA ligase (AMP-binding) Psyc_1867 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 71066029 Common hupB putative DNA-binding protein HU-beta Psyc_1474 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 71066202 Common ppk polyphosphate kinase Psyc_1647 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 71066413 Common - hypothetical protein Psyc_1858 50 COG2035 COG2035, Predicted membrane protein Function unknown 71065694 Common - probable DNA binding protein, helix turn helix motif Psyc_1136 22 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 71064600 Common - hypothetical protein Psyc_0019 9 None None None 71066589 Common znuB ABC zinc transporter, inner membrane subunit ZnuB Psyc_2035 126 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 71065588 Common - hypothetical protein Psyc_1028 12 None None None 71065761 Common aspS aspartyl-tRNA synthetase Psyc_1203 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065077 Common rpmD 50S ribosomal protein L30 Psyc_0507 130 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 71065997 Common - probable formate dehydrogenase Psyc_1442 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 71064774 Common - hypothetical protein Psyc_0194 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 71065036 Common - possible phage holin protein Psyc_0466 28 COG1403 McrA, Restriction endonuclease Defense mechanisms 71065387 Common - hypothetical protein Psyc_0827 3 None None None 71065218 Common - ABC efflux transporter, fused ATPase and inner membrane domains Psyc_0652 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 71065070 Common rplX 50S ribosomal protein L24 Psyc_0500 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 71065524 Common - putative acyl-CoA dehydrogenase Psyc_0964 148 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 71065118 Nonpathogen - hypothetical protein Psyc_0550 1 None None None 71065733 Common - putative acetyl-CoA hydrolase/transferase family protein Psyc_1175 95 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 71064729 Common dapA probable dihydrodipicolinate synthase Psyc_0148 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 71064720 Common aroE probable shikimate 5-dehydrogenase Psyc_0139 201 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 71065774 Common glnE glutamate-ammonia ligase adenylyltransferase Psyc_1217 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 71065592 Common - putative bacteriophage lysozyme Psyc_1032 49 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 71064868 Nonpathogen - hypothetical protein Psyc_0291 1 None None None 71065523 Common - probable site-specific recombinase Psyc_0963 23 COG4389 COG4389, Site-specific recombinase DNA replication, recombination, and repair 71064694 Common comEA putative competence DNA binding protein ComEA Psyc_0113 99 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 71064828 Common - hypothetical protein Psyc_0251 19 COG3861 COG3861, Uncharacterized protein conserved in bacteria Function unknown 71065080 Common rpmJ 50S ribosomal protein L36 Psyc_0510 140 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 71065448 Common - hypothetical protein Psyc_0888 85 COG1720 COG1720, Uncharacterized conserved protein Function unknown 71064736 Common - hypothetical protein Psyc_0156 55 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 71064851 Common - hypothetical protein Psyc_0274 93 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 71066158 Nonpathogen - hypothetical protein Psyc_1603 1 None None None 71065308 Common - hypothetical protein Psyc_0747 6 COG4729 COG4729, Uncharacterized conserved protein Function unknown 71064924 Common - enoyl-CoA hydratase Psyc_0348 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 71065068 Common rpsQ ribosomal protein S17 Psyc_0498 235 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 71065348 Common - hypothetical protein Psyc_0788 39 None None None 71065533 Common trpD anthranilate phosphoribosyltransferase Psyc_0973 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 71065714 Common - probable methyltransferase Psyc_1156 145 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 71064912 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ Psyc_0336 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 71065232 Common - hypothetical protein Psyc_0666 15 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 71066371 Common pilI putative type IV pili signal transducer (chemotaxis/motility, CheW domain) Psyc_1816 71 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 71066524 Common tyrS tyrosyl-tRNA synthetase Psyc_1970 242 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 71065034 Common - probable phage terminase, large subunit Psyc_0464 48 COG4626 COG4626, Phage terminase-like protein, large subunit General function prediction only 71066637 Common - RND superfamily multidrug efflux pump Psyc_2083 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 71065208 Common yfdH putative glycosyl transferase Psyc_0642 186 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 71065049 Common - possible phage integrase Psyc_0479 107 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 71065688 Nonpathogen - hypothetical protein Psyc_1130 1 None None None 71066664 Common apbE probable Thiamine biosynthesis lipoprotein Psyc_2110 123 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 71065557 Nonpathogen - hypothetical protein Psyc_0997 1 None None None 71064861 Common - possible protease Psyc_0284 52 COG3975 COG3975, Predicted protease with the C-terminal PDZ domain General function prediction only 71064657 Nonpathogen - hypothetical protein Psyc_0076 1 None None None 71065673 Common - hypothetical protein Psyc_1115 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 71065100 Nonpathogen - hypothetical protein Psyc_0530 2 None None None 71065171 Common narK MFS Nitrate/nitrite transporter NarK Psyc_0604 86 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 71066290 Nonpathogen - hypothetical protein Psyc_1735 1 None None None 71066192 Common - probable copper(heavy metal)-transporting P-type ATPase Psyc_1637 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 71066509 Common - probable aspartate/glutamate racemase Psyc_1954 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 71065120 Common groES co-chaperonin GroES Psyc_0552 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 71065892 Common ppsA phosphoenolpyruvate synthase Psyc_1335 236 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 71064586 Common - hypothetical protein Psyc_0005 66 COG1971 COG1971, Predicted membrane protein Function unknown 71066312 Common - N-acetyl-anhydromuranmyl-L-alanine amidase Psyc_1757 107 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 71066131 Common acrB RND Superfmily multidrug/dye/detergent efflux pump AcrB Psyc_1576 184 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 71065454 Common - translation-associated GTPase Psyc_0894 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 71064901 Common smpB SsrA-binding protein Psyc_0325 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 71066503 Common - hypothetical protein Psyc_1948 47 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 71065925 Common - possible phage integrase Psyc_1370 69 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 71066298 Nonpathogen - hypothetical protein Psyc_1743 1 None None None 71066138 Common - probable NreA protein Psyc_1583 14 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 71066538 Common mutY probable A/G-specific adenine glycosylase Psyc_1984 207 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 71065679 Common arsA arsenical pump-driving ATPase, ArsA Psyc_1121 87 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 71065492 Common - probable Insulinase-like peptidase, family M16 Psyc_0932 199 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 71065813 Common - hypothetical protein Psyc_1256 172 COG1496 COG1496, Uncharacterized conserved protein Function unknown 71065604 Common folE2 probable GTP cyclohydrolase I Psyc_1044 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 71065964 Common infA translation initiation factor IF-1 Psyc_1409 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 71064938 Common - hypothetical protein Psyc_0362 8 None None None 71065129 Common dapE succinyl-diaminopimelate desuccinylase Psyc_0561 203 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 71065888 Common - hypothetical protein Psyc_1331 8 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 71065665 Nonpathogen - hypothetical protein Psyc_1107 1 None None None 71066573 Common rpsP 30S ribosomal protein S16 Psyc_2019 212 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 71065840 Common cvpA possible colicin V production protein Psyc_1283 6 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 71066008 Common - probable transposase orfAB Psyc_1453 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065834 Common secD preprotein translocase subunit SecD Psyc_1277 207 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 71066257 Common ubiA prenyltransferase Psyc_1702 167 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 71066062 Common - possible NUDIX hydrolase Psyc_1507 96 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 71066053 Common clpA probable ATP-dependent Clp protease Psyc_1498 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 71066067 Common - probable Ubiquinone biosyntheis protein COQ7 Psyc_1512 50 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 71066672 Common avtA valine--pyruvate transaminase Psyc_2118 164 COG3977 COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase Amino acid transport and metabolism 71065142 Common holA probable DNA polymerase III, delta subunit Psyc_0574 58 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 71066469 Common - hypothetical protein Psyc_1914 23 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 71065903 Common - hypothetical protein Psyc_1348 57 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 71065315 Common - hypothetical protein Psyc_0755 22 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 71065445 Common - transposase, mutator family Psyc_0885 87 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066625 Common thiL probable thiamine-monophosphate kinase Psyc_2071 194 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 71066104 Common kdtA possible three-deoxy-D-manno-octulosonic-acid transferase Psyc_1549 127 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 71065575 Nonpathogen - hypothetical protein Psyc_1015 1 None None None 71065912 Common - probable multidrug efflux pump (emrA) Psyc_1357 159 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 71065169 Common narL nitrate/nitrite response regulator, possibly NarL Psyc_0602 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 71064808 Nonpathogen - hypothetical protein Psyc_0228 1 None None None 71066165 Common gpdh probable Glyceraldehyde 3-phosphate dehydrogenase family Psyc_1610 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 71066460 Common - hypothetical protein Psyc_1905 56 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 71064982 Common - hypothetical protein Psyc_0410 82 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 71064766 Common - hypothetical protein Psyc_0186 38 COG3871 COG3871, Uncharacterized stress protein (general stress protein 26) General function prediction only 71064645 Common pilB pilin secretion/fimbrial assembly system protein, PilB Psyc_0064 209 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 71066151 Common - transcriptional regulatory reciever protein Psyc_1596 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 71065397 Common - hypothetical protein Psyc_0837 79 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 71064673 Common - hypothetical protein Psyc_0092 50 COG0824 FcbC, Predicted thioesterase General function prediction only 71064632 Common - hypothetical protein Psyc_0051 26 COG3177 COG3177, Uncharacterized conserved protein Function unknown 71066076 Common - putative NADH-dependent flavin oxidoreductase Psyc_1521 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 71066442 Common rpoB DNA-directed RNA polymerase subunit beta Psyc_1887 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 71065186 Nonpathogen - hypothetical protein Psyc_0619 4 None None None 71065641 Common - possible ATP-dependent DEAD/DEAH box RNA-helicase Psyc_1082 248 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 71064931 Common hflX probable GTP - binding protein, possible phage lambda cII repressor Psyc_0355 210 COG2262 HflX, GTPases General function prediction only 71066480 Common psd putative phosphatidylserine decarboxylase Psyc_1925 95 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 71066225 Common dhe4 glutamate dehydrogenase Psyc_1670 167 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 71066477 Common phoR possible signal transduction histidine kinase sensor Psyc_1922 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 71064666 Common - fructose-1,6-bisphosphate aldolase Psyc_0085 32 COG3588 COG3588, Fructose-1,6-bisphosphate aldolase Carbohydrate transport and metabolism 71065947 Common - possible pyridine nucleotide-disulphide oxidoreductase Psyc_1392 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 71065847 Common - hypothetical protein Psyc_1290 2 None None None 71066276 Nonpathogen - hypothetical protein Psyc_1721 1 None None None 71066114 Common ccmH probable cytochrome C-type biogenesis protein Psyc_1559 90 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 71064758 Common - hypothetical protein Psyc_0178 72 COG2391 COG2391, Predicted transporter component General function prediction only 71066328 Common glyS glycyl-tRNA synthetase subunit beta Psyc_1773 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 71065277 Common - probable ubiquinone biosynthesis protein Psyc_0711 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 71065530 Common - possible small-conductance mechanosensitive ion channel Psyc_0970 24 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 71064787 Common rpoH RNA polymerase factor sigma-32 Psyc_0207 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 71065071 Common rplE 50S ribosomal protein L5 Psyc_0501 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 71066342 Common - transposase, orfA, IS3/IS911family Psyc_1787 25 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 71065251 Common - hypothetical protein Psyc_0685 101 COG1520 COG1520, FOG: WD40-like repeat Function unknown 71066657 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Psyc_2103 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 71065434 Common - hypothetical protein Psyc_0874 4 None None None 71065505 Common - hypothetical protein Psyc_0945 64 COG2836 COG2836, Uncharacterized conserved protein Function unknown 71065244 Common ndk putative nucleoside diphosphate kinase Psyc_0678 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 71066494 Common - probable HAM1 protein homolog Psyc_1939 228 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 71066378 Common metI ABC methionine transporter, ATPase subunit MetI Psyc_1823 103 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 71066605 Common mraY probable phospho-N-acetylmuramoyl-pentapeptide-transferase Psyc_2051 221 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 71066082 Common fabZ possible beta-hydroxyacyl-(acyl-carrier-protein) dehydratase Psyc_1527 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 71066487 Common - hypothetical protein Psyc_1932 56 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 71065823 Common - hypothetical protein Psyc_1266 24 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 71065181 Common moaC putative molybdopterin cofactor biosynthesis protein C Psyc_0614 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 71064905 Common bioD dithiobiotin synthetase Psyc_0329 140 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 71066443 Common rplL 50S ribosomal protein L7/L12 Psyc_1888 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 71066432 Common aroB probable 3-dehydroquinate synthase Psyc_1877 207 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 71065793 Common - transcriptional regulator CysB-like protein Psyc_1236 173 COG0583 LysR, Transcriptional regulator Transcription 71065886 Common - possible transcriptional regulator ,TetR family Psyc_1329 8 COG1309 AcrR, Transcriptional regulator Transcription 71066157 Common - outer membrane protein OprF, OmpA/OmpF family Psyc_1602 164 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 71066121 Common rpsI 30S ribosomal protein S9 Psyc_1566 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 71066188 Common - ribonuclease T Psyc_1633 67 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 71065983 Common - 3-hydroxybutyrate dehydrogenase Psyc_1428 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 71064993 Common - probable transposase ISSod6 Psyc_0423 43 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 71066264 Common - putative transposase Psyc_1709 8 None None None 71065807 Common - probable TolQ proton channel Psyc_1250 146 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 71065651 Common - NADH-dependent flavin oxidoreductase, NADH oxidase Psyc_1093 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 71066369 Common pilK possible MCP methyltransferase, CheR-type Psyc_1814 136 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 71064742 Common - probable exopolyphosphatase Psyc_0162 180 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 71065196 Common - hypothetical protein Psyc_0630 49 COG2431 COG2431, Predicted membrane protein Function unknown 71065390 Common - putative electron transport complex, RnfABCDGE type, B subunit Psyc_0830 99 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 71065227 Common - putative LmbE-like protein Psyc_0661 60 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 71065856 Common - probable fatty acyl-CoA reductase protein Psyc_1299 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 71065022 Common - possible pore-forming tail tip protein Psyc_0452 19 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 71065617 Common - hypothetical protein Psyc_1058 47 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown