Azoarcus sp. EbN1, complete genome NC_006513 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 56479013 Common - hypothetical protein ebA6257 15 None None None 56477500 Common - alcohol dehydrogenase ebA3654 95 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 56477667 Common - hypothetical protein ebB139 8 None None None 56475466 Common - conserved hypothetical protein, putative kinase ebA56 66 COG1718 RIO1, Serine/threonine protein kinase involved in cell cycle control Signal transduction mechanisms / Cell division and chromosome partitioning 56475509 Common - hypothetical protein ebA138 9 None None None 56478687 Common paaD2 hypothetical protein ebA5723 54 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 56475757 Common cytC4 di-Heme cytochrome c ebA621 57 COG2863 COG2863, Cytochrome c553 Energy production and conversion 56475747 Nonpathogen - hypothetical protein ebA603 1 None None None 56478043 Common - hypothetical protein ebA4601 36 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 56478186 Common nuoK NADH dehydrogenase subunit K ebB168 163 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 56476853 Common - hypothetical protein ebA2511 22 None None None 56476037 Common - nucleotidyl transferase ebA1143 210 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 56479069 Common tnp49 transposase, is4 family ebA6355 28 None None None 56475459 Common phbC putative poly(3-hydroxyalkanoate) synthetase ebA48 24 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 56476023 Common - hypothetical protein ebA1117 15 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 56476774 Common - hypothetical protein ebA2396 12 None None None 56478037 Nonpathogen - hypothetical protein ebA4593 1 None None None 56479300 Nonpathogen - hypothetical protein ebA6751 1 None None None 56479155 Common - probable integral membrane protein ebD121 16 COG3235 COG3235, Predicted membrane protein Function unknown 56479167 Common ppk polyphosphate kinase ebA6526 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 56476770 Common - putative transcriptional regulator ebA2392 47 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 56476229 Common murD UDP-N-acetylmuramoylalanine-D-glutamate ligase ebA1447 207 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 56479522 Common tnp52 predicted transposase ebA7204 32 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56476926 Common tolR biopolymer transport protein ExbD/TolR ebA2645 125 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 56479331 Common - ABC transporter, ATPase subunit ebA6813 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 56476234 Common mraW S-adenosyl-methyltransferase mraW ebA1452 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 56476788 Common - helicase (Snf2 family) ebA2413 182 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 56476662 Common ccmF cytochrome c-type biogenesis protein CcmF ebA2222 10 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 56479276 Nonpathogen - hypothetical protein ebD122 1 None None None 56475574 Common istA transposase ebA269 33 None None None 56477243 Common - hypothetical protein ebD73 19 COG5591 COG5591, Uncharacterized conserved protein Function unknown 56479309 Common tnp51 transposase ebA6770 68 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477198 Common ppsC protein stimulating phenylphosphate synthetase activity ebD7 66 COG0517 COG0517, FOG: CBS domain General function prediction only 56476441 Nonpathogen - hypothetical protein ebA1853 1 None None None 56477393 Common ilvA putative threonine dehydratase ebA3463 193 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 56476756 Common - hypothetical protein c1A92 33 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 56477261 Common - hypothetical protein ebA3238 15 None None None 56478960 Nonpathogen - hypothetical protein ebD110 1 COG3895 COG3895, Predicted periplasmic protein General function prediction only 56478006 Common - fragment of conserved hypothetical protein, predicted Pyridine nucleotide-disulphide oxidoreductase family ebA4535 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 56479260 Common - hypothetical protein ebA6688 23 COG2938 COG2938, Uncharacterized conserved protein Function unknown 56477783 Common - hypothetical protein ebA4143 132 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 56478467 Nonpathogen - hypothetical protein ebA5329 1 None None None 56479353 Common - predicted integral membrane protein ebA6860 25 COG5528 COG5528, Predicted integral membrane protein Function unknown 56478019 Common gltI putative ABC transporter, glutamate receptor ebA4561 150 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 56479551 Nonpathogen - hypothetical protein ebA7264 1 None None None 56475712 Nonpathogen - hypothetical protein ebA541 1 None None None 56476622 Common cobC cobalamin biosynthetic protein ebA2133 186 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 56478969 Nonpathogen - hypothetical protein ebA6182 2 None None None 56475700 Nonpathogen - hypothetical protein ebA519 1 None None None 56475945 Common yfhK sensory transduction histidine kinase ebA960 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 56477775 Common - hypothetical protein ebA4129 23 None None None 56477716 Common - probable transmembrane ABC transporter protein,permease ebA4019 154 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 56479509 Common - putative ABC transporter protein ebA7181 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 56478668 Nonpathogen - hypothetical protein ebA5684 1 None None None 56479264 Common sdhC succinate dehydrogenase cytochrome b-556 subunit ebD20 51 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 56477730 Common maeB2 malic enzyme ebA4043 213 COG0281 SfcA, Malic enzyme Energy production and conversion 56478105 Common rluD ribosomal large subunit pseudouridine synthase D ebA4725 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 56478472 Common tnp40 transposase, fragment ebA5337 61 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475551 Common istB transposition helper protein ebA208 101 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477051 Common cspC probable cold shock family protein ebA2865 59 COG1278 CspC, Cold shock proteins Transcription 56476807 Common - hypothetical protein ebA2436 13 None None None 56478792 Common - hypothetical protein ebA5899 6 None None None 56475933 Common - hypothetical protein ebB30 167 COG0316 IscA, Uncharacterized conserved protein Function unknown 56479022 Common nosD putative copper binding periplasmic protein ebA6268 54 COG3420 NosD, Nitrous oxidase accessory protein Inorganic ion transport and metabolism 56476515 Common badH putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase ebA1956 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56475650 Common - hypothetical protein ebA412 21 None None None 56475944 Nonpathogen - hypothetical protein ebA958 1 None None None 56476502 Nonpathogen - hypothetical protein ebA1938 1 None None None 56475515 Common - hypothetical protein ebA148 116 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 56477850 Common - glycosyl transferase, group 1 ebA4264 216 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476974 Common - hypothetical protein ebA2737 10 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 56477909 Nonpathogen - hypothetical protein ebA4361 1 None None None 56478497 Common padC phenylacetyl-CoA:acceptor oxidoreductase ebA5395 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 56475816 Nonpathogen - hypothetical protein ebA749 1 None None None 56479054 Nonpathogen - hypothetical protein ebD114 1 None None None 56479514 Common moaC molybdenum cofactor biosynthesis protein C ebA7189 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 56478931 Common - putative beta-(1-3)-glucosyl transferase ebA6116 104 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 56479031 Common narH nitrate reductase, beta subunit ebA6285 140 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 56475647 Nonpathogen - hypothetical protein ebA408 1 None None None 56475627 Nonpathogen - hypothetical protein ebA367 1 None None None 56475713 Nonpathogen - hypothetical protein ebA542 1 None None None 56477932 Common dnaE DNA polymerase III alpha chain ebA4398 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 56478234 Nonpathogen - hypothetical protein ebA4916 2 None None None 56478775 Common wbpO UDP-glucose/GDP-mannose dehydrogenase-like protein ebA5870 203 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 56479500 Common rimM 16S rRNA processing protein ebA7167 164 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 56477404 Common - conserved hypothetical protein, predicted DSBA oxidoreductase family ebA3488 77 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 56476581 Common - branched-chain amino acid ABC transporter ebA2070 115 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56477921 Common proA gamma-glutamyl phosphate reductase ebA4380 198 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 56477221 Common - putative amino acid ABC transporter ebA3173 139 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56476158 Common glyQ glycyl-tRNA synthetase subunit alpha ebA1331 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 56478431 Common - conserved hypothetical protein, predicted peptidase M42 family ebA5273 60 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 56479223 Common traN mating pair stabilization protein ebA6625 25 None None None 56478932 Common - putative beta (1-6) glucan synthase ebA6119 14 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 56477300 Nonpathogen - hypothetical protein ebB101 1 COG5393 COG5393, Predicted membrane protein Function unknown 56475871 Common - predicted glycosyl transferase ebA833 113 COG0380 OtsA, Trehalose-6-phosphate synthase Carbohydrate transport and metabolism 56477507 Common - hypothetical protein ebA3670 10 None None None 56476905 Nonpathogen - hypothetical protein ebA2613 1 None None None 56477003 Common - peptidase family U32 protein ebA2789 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 56476098 Common vacB exoribonuclease RNase R (VacB protein) ebA1247 192 COG0557 VacB, Exoribonuclease R Transcription 56476306 Nonpathogen - hypothetical protein ebA1597 1 None None None 56476892 Common - hypothetical protein ebB83 12 None None None 56478754 Common nusA transcription elongation factor NusA ebA5840 216 COG0195 NusA, Transcription elongation factor Transcription 56479106 Nonpathogen - hypothetical protein ebA6413 1 None None None 56479138 Common - putative response regulator receiver ebA6472 221 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 56476763 Nonpathogen - hypothetical protein ebA2383 1 None None None 56476391 Common - hypothetical protein ebA1762 73 COG1872 COG1872, Uncharacterized conserved protein Function unknown 56478068 Common - hypothetical protein ebB159 10 None None None 56477044 Nonpathogen - hypothetical protein ebA2858 1 None None None 56479435 Common - hypothetical protein ebA7046 92 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 56477019 Common priA primosomal protein N' (Replication factor Y) ebA2819 211 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 56477140 Common phoR sensory transduction histidine kinase ebA3021 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 56478569 Nonpathogen - hypothetical protein ebA5501 1 None None None 56479180 Common - hypothetical protein ebA6548 57 COG3174 COG3174, Predicted membrane protein Function unknown 56477630 Common moeB hypothetical protein ebA3867 223 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 56476312 Common - hypothetical protein, INTERPRO suggestion: probable Fimbrial assembly ebA1610 4 None None None 56476476 Common bssH possible transporter c2A195 194 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56477680 Common ruvA Holliday junction DNA helicase motor protein ebA3959 209 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 56477287 Common - hypothetical protein ebA3286 55 COG3649 COG3649, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 56478114 Common - hypothetical protein ebA4736 131 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 56478910 Common tnp47 transposase (IS4) ebA6086 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56477705 Common wcaG ADP-l-glycero-D-manno-heptose-6-epimerase ebA3999 223 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56478535 Common - uroporphyrin-III C/tetrapyrrole (Corrin/porphyrin) methyltransferase ebA5446 206 COG0313 COG0313, Predicted methyltransferases General function prediction only 56478221 Common - putative iron utilization protein ebA4893 161 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 56476507 Nonpathogen - hypothetical protein ebA1944 1 None None None 56478156 Common hrcA heat-inducible transcription repressor ebA4803 151 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 56478477 Common osmY predicted periplasmic or secreted lipoprotein ebA5350 23 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 56479238 Common - ATP-dependent DNA ligase ebA6655 81 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 56478537 Common - predicted metal-binding, possibly nucleic acid-binding protein ebA5452 51 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 56475680 Common - conserved hypothetical protein, predicted carboxymuconolactone decarboxylase family ebA485 81 COG2128 COG2128, Uncharacterized conserved protein Function unknown 56477860 Nonpathogen - hypothetical protein ebA4281 9 None None None 56476540 Nonpathogen - probable prevent-host-death protein ebD47 1 None None None 56477177 Nonpathogen - hypothetical protein ebA3090 1 None None None 56477482 Common gdh NAD-glutamate dehydrogenase ebA3619 76 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 56477640 Common - probable 3-hydroxyisobutyrate dehydrogenase ebA3884 170 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 56476379 Common thiD hydroxymethylpyrimidine kinase ebA1745 58 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 56476606 Common hemR hemin receptor precursor, TonB-dependent outer membrane uptake protein ebA2117 129 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 56476994 Common - conserved hypothetical protein, predicted Rhodopsin-like G-protein coupled receptor superfamily ebA2769 26 COG3945 COG3945, Uncharacterized conserved protein Function unknown 56477329 Nonpathogen - hypothetical protein ebA3349 1 None None None 56477676 Nonpathogen - hypothetical protein, putative transcription regulator with helix-turn-helix domain ebA3954 2 COG1414 IclR, Transcriptional regulator Transcription 56479476 Common pepN probable aminopeptidase N (Alpha-aminoacylpeptide hydrolase) ebA7122 158 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 56476347 Nonpathogen - hypothetical protein ebA1684 1 None None None 56478743 Common - putative Esterase/lipase/thioesterase family protein ebA5823 98 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56476409 Common - hypothetical protein ebA1795 6 COG3889 COG3889, Predicted solute binding protein General function prediction only 56477052 Common maa putative maltose O-acetyltransferase ebA2867 187 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 56476510 Common tnpF transposase fragment ebD45 28 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475452 Common - sensory transduction histidine kinase ebA38 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56477990 Nonpathogen - hypothetical protein ebA4501 1 None None None 56477834 Common - putative SCO1/SenC family protein, probably involved in biogenesis of respiratory cytochrome aa3 oxidase ebA4238 107 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 56479416 Common - hypothetical protein, potential lipoprotein ebA6999 8 None None None 56476634 Common abmA salicylyl-CoA 5-hydroxylase ebA2164 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 56478263 Nonpathogen - hypothetical protein ebA4967 1 None None None 56477299 Nonpathogen - hypothetical protein ebD74 2 None None None 56475888 Common - predicted hydrolase, fragment ebA861 100 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 56478213 Common rfnD electron transport complex protein ebA4882 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 56475892 Common ihfA integration host factor subunit alpha ebA866 210 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 56476181 Common nagI gentisate 1,2-dioxygenase ebA1373 29 COG3435 COG3435, Gentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 56476937 Nonpathogen - hypothetical protein ebA2668 1 None None None 56477546 Nonpathogen - hypothetical protein ebA3744 1 None None None 56479458 Nonpathogen - hypothetical protein ebA7090 1 None None None 56476669 Nonpathogen - hypothetical protein ebA2236 1 None None None 56478637 Common - 3-hydroxyacyl-CoA dehydrogenase ebA5620 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56475587 Common tnpF2 transposase, fragment ebA298 19 None None None 56479366 Common - hypothetical protein ebB239 35 COG3881 COG3881, Uncharacterized protein conserved in bacteria Function unknown 56478131 Common asd aspartate-semialdehyde dehydrogenase ebA4761 194 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 56476883 Nonpathogen - hypothetical protein ebA2571 1 None None None 56477277 Nonpathogen - hypothetical protein ebA3273 1 None None None 56477007 Common ptsH sugar transport PTS system phosphocarrier protein HPR ebD68 124 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 56477398 Common - hypothetical protein ebA3471 83 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56475770 Common - hypothetical protein ebA645 185 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56477492 Common - carbonic anhydrase ebA3637 102 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 56479377 Common - ADP-heptose--LPS heptosyltransferase II ebA6912 116 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 56479044 Nonpathogen - hypothetical protein ebB226 1 None None None 56475471 Common - hypothetical protein ebA65 82 COG3177 COG3177, Uncharacterized conserved protein Function unknown 56478072 Common acd acyl-CoA dehydrogenase, probably isovaleryl-CoA dehydrogenase ebA4656 170 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56478729 Nonpathogen - hypothetical protein ebA5799 1 None None None 56479245 Common - hypothetical protein ebB234 2 None None None 56476611 Common istA transposase ebA2124 70 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477893 Common ntpA dATP pyrophosphohydrolase ebA4334 39 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 56479313 Common istB transposition helper protein, fragment ebA6776 49 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476204 Common yajC preprotein translocase subunit YajC ebB40 146 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 56479145 Common - ribosomal-protein-alanine acetyltransferase ebA6491 186 COG0456 RimI, Acetyltransferases General function prediction only 56476000 Common hemB delta-aminolevulinic acid dehydratase ebA1071 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 56479564 Nonpathogen - hypothetical protein ebB251 1 None None None 56476001 Common engB GTPase EngB ebA1073 178 COG0218 COG0218, Predicted GTPase General function prediction only 56478274 Common pcaK predicted 4-hydroxybenzoate transporter ebA4989 174 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 56476868 Nonpathogen - hypothetical protein ebA2536 1 None None None 56477944 Common - putative maoC-like dehydratase ebA4434 93 COG2030 MaoC, Acyl dehydratase Lipid metabolism 56476253 Common pfkB carbohydrate kinase ebA1485 89 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 56477973 Common menG ribonuclease activity regulator protein RraA ebA4476 99 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 56475436 Common pilE1 class II pilin protein PilE ebA6 32 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 56475478 Common tnp2 transposase (IS4) ebA78 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56477617 Common rpsK 30S ribosomal protein S11 ebA3850 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 56478443 Common - hypothetical protein ebA5293 43 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 56476062 Common groeS chaperonins cpn10 (10 kDa subunit) ebB35 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 56478846 Common - hypothetical protein ebD16 19 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 56475913 Common - hypothetical protein ebB27 11 COG3784 COG3784, Uncharacterized protein conserved in bacteria Function unknown 56478824 Common istB transposase subunit ebA5948 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478314 Common xseA exodeoxyribonuclease vII, large subunit ebA5078 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 56478256 Common thrC threonine synthase ebA4955 144 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 56475443 Nonpathogen - hypothetical protein ebA23 1 None None None 56477360 Common pgpA putative phosphatidyl-glycerophosphatase hydrolase ebA3402 99 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 56476239 Common - conserved hypothetical protein, predicted methyltransferase ebA1457 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 56478056 Common adhB alcohol dehydrogenase II ebA4623 175 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 56476171 Common istA transposase ebA1354 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478659 Common pimD putative pimeloyl-CoA dehydrogenase ebA5669 133 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56475558 Common - hypothetical protein ebA226 11 None None None 56477820 Nonpathogen - hypothetical protein ebA4217 3 None None None 56476246 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein ebA1472 181 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 56478121 Common - hypothetical protein ebA4747 117 COG0517 COG0517, FOG: CBS domain General function prediction only 56478938 Common - hypothetical protein ebA6130 76 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 56476792 Common - hypothetical protein ebA2417 45 COG3421 COG3421, Uncharacterized protein conserved in bacteria Function unknown 56477178 Common - hypothetical protein ebA3091 49 COG2733 COG2733, Predicted membrane protein Function unknown 56475577 Common - helicase/SNF2 family domain protein ebA274 155 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 56476046 Common hemD uroporphyrinogen III synthase ebA1165 104 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 56478855 Common uppS undecaprenyl pyrophosphate synthase ebA5991 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 56476436 Common exbD1 biopolymer transport protein ExbD/TolR ebA1842 133 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 56475532 Common fumA fumarate hydratase ebA173 146 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 56476268 Common - predicted Glycosyltransferase, RfaG ebA1517 27 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56478731 Common - hypothetical protein ebA5803 50 COG3762 COG3762, Predicted membrane protein Function unknown 56479423 Nonpathogen - hypothetical protein ebA7016 1 None None None 56477567 Common istB transposition helper protein ebA3781 101 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56475567 Common - hypothetical protein ebA250 36 COG2378 COG2378, Predicted transcriptional regulator Transcription 56475493 Common - hypothetical protein ebA106 5 None None None 56475797 Common - hypothetical protein ebA710 86 COG1430 COG1430, Uncharacterized conserved protein Function unknown 56477370 Common - possible ABC transporter, permease protein precursor ebA3425 139 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 56477883 Common - hypothetical protein ebA4319 9 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 56478231 Common gspF2 general secretion pathway protein F ebA4913 140 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 56478244 Common istA transposase ebA4935 151 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476367 Common - hypothetical protein ebA1722 34 None None None 56477789 Common dctS two component sensor protein ebA4156 224 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56477215 Common pchF probable p-cresol methylhydroxylase subunit ebA3165 126 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56478562 Nonpathogen - hypothetical protein ebA5489 1 None None None 56475874 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase ebA837 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 56478416 Common - putative ATP-dependent Lon protease ebA5250 57 COG4930 COG4930, Predicted ATP-dependent Lon-type protease Posttranslational modification, protein turnover, chaperones 56476629 Common cheB chemotaxis response regulator containing a CheY-like receiver domain and a protein-glutamate methylesterase ebA2148 150 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 56477857 Common - putative glycosyl transferase, gene fragment ebA4275 216 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56479556 Common - hypothetical protein ebA7270 2 None None None 56475724 Common phaA putative monovalent cation/H+ antiporter subunit A ebA558 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 56478897 Common - putative cytochrome c ebB214 56 COG3474 COG3474, Cytochrome c2 Energy production and conversion 56475547 Common istB transposition helper protein ebA199 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56479465 Common - putative HlyD-like secretion protein ebA7103 177 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56476588 Nonpathogen - hypothetical protein ebA2085 2 None None None 56476713 Nonpathogen - hypothetical protein ebA2309 1 None None None 56475834 Common nlpB predicted uncharacterized lipoprotein ebA773 32 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 56478249 Common - putative nucleotidyltransferase ebA4944 117 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 56478885 Common - putative rubredoxin reductase ebA6036 214 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 56478720 Common ppsB hypothetical protein ebA5783 134 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56475618 Nonpathogen - hypothetical protein ebA351 1 None None None 56475439 Common - hypothetical protein ebB1 3 None None None 56478695 Common hutG formimidoylglutamase ebA5739 97 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 56476291 Nonpathogen - hypothetical protein ebA1559 1 None None None 56478919 Common - predicted TonB-dependent receptor protein ebA6096 116 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 56475592 Common - hypothetical protein ebA305 6 None None None 56478707 Nonpathogen - hypothetical protein ebA5762 1 None None None 56478901 Common - hypothetical protein ebA6073 16 None None None 56478061 Common asnA L-asparaginase II ebA4634 46 COG4448 AnsA, L-asparaginase II Amino acid transport and metabolism 56477345 Common - hypothetical protein ebD77 11 None None None 56475590 Nonpathogen - hypothetical protein ebA302 1 None None None 56478768 Common - hypothetical protein ebD99 7 None None None 56476703 Common - hypothetical protein ebB65 6 None None None 56476878 Nonpathogen - hypothetical protein ebA2556 1 None None None 56477077 Common parA chromosome partitioning protein para ebA2912 231 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56475631 Common - hypothetical protein ebA374 3 None None None 56478836 Nonpathogen - hypothetical protein ebA5961 3 None None None 56477015 Common - hypothetical protein ebA2811 178 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56477422 Common ccmG cytochrome c biogenesis protein ebA3522 139 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56475722 Common phaD putative monovalent cation/H+ antiporter subunit D ebA556 94 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 56478240 Common tnpF15 transposase fragment ebA4927 11 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56478346 Nonpathogen - hypothetical protein ebA5124 1 None None None 56478888 Common - hypothetical protein ebB213 44 COG3360 COG3360, Uncharacterized conserved protein Function unknown 56476074 Common dnaX DNA polymerase III (subunits tau and gamma) ebA1203 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 56479115 Nonpathogen - molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, small membrane subunit ebA6432 3 COG3301 NrfD, Formate-dependent nitrite reductase, membrane component Inorganic ion transport and metabolism 56475494 Nonpathogen - hypothetical protein ebA107 1 None None None 56476560 Common - two component response regulator ebA2024 218 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478690 Common paaK2 probable phenylacetate-coenzyme A ligase isoenzyme ebA5727 130 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 56478902 Common - hypothetical protein ebA6074 19 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 56475798 Common - pseudouridine synthase ebA713 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 56476385 Common pilL pili chemotaxis protein similar PilL ebA1751 223 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 56479197 Common - hypothetical protein ebA6578 10 None None None 56476104 Common hflX GTP-binding protein hflX ebA1254 212 COG2262 HflX, GTPases General function prediction only 56478200 Common greB transcription elongation factor GreB ebA4864 186 COG0782 GreA, Transcription elongation factor Transcription 56479440 Common acpP acyl carrier protein ebD125 44 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476931 Common - radical activating enzyme; radical SAM family ebA2656 122 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 56479170 Common - hypothetical protein ebA6530 57 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 56478681 Common fdhG putative formaldehyde dehydrogenase (glutathione-dependent) ebA5713 189 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 56475881 Common - hypothetical protein ebA845 11 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 56476561 Common - putative regulatory protein, LuxR ebA2026 89 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 56478827 Common - hypothetical protein ebA5952 12 None None None 56477690 Common - hypothetical protein ebB140 16 None None None 56478169 Common MRSA phosphoglucomutase/phosphomannomutase ebA4825 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 56477523 Common - flp pilus assembly protein, ATPase ebA3707 147 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 56478387 Common cbiB adenosylcobinamide-phosphate synthase ebA5199 40 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 56475703 Common tnp10 putative transposase ebA523 27 None None None 56479179 Common epd glyceraldehyde-3-phosphate dehydrogenase ebA6546 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 56478457 Common - putative ABC transporter, periplasmic binding protein ebA5316 115 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56479122 Common - predicted permease ebA6443 28 COG0701 COG0701, Predicted permeases General function prediction only 56475826 Common istB transposase/IS protein ebA763 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477224 Common - hypothetical protein ebA3180 10 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 56476969 Common cbpA curved DNA-binding protein ebA2728 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56478679 Nonpathogen - hypothetical protein ebA5711 1 None None None 56476489 Common bbsB subunit of benzoylsuccinyl-CoA thiolase c2A315 108 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56476829 Common - putative transcriptional regulator, possibly phage-related ebD61 41 COG3311 AlpA, Predicted transcriptional regulator Transcription 56478299 Nonpathogen - hypothetical protein ebA5037 13 COG4995 COG4995, Uncharacterized protein conserved in bacteria Function unknown 56477388 Nonpathogen - probable regulator of chromosome condensation ebA3457 1 None None None 56478073 Common - putative propionyl-CoA carboxylase (Beta subunit) ebA4657 143 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 56476612 Nonpathogen - hypothetical protein ebA2125 3 None None None 56476203 Common tgt queuine tRNA-ribosyltransferase ebA1415 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 56476859 Common - hypothetical protein ebA2521 26 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 56477314 Common npd NAD-dependent deacetylase ebA3329 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 56476495 Common tnpF4 putative transposase (Fragment) c2A230 7 None None None 56476827 Common - hypothetical protein ebA2468 10 None None None 56477255 Common istA transposase ebA3230 28 None None None 56479382 Common glgC glucose-1-phosphate adenylyltransferase ebA6921 167 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 56477955 Common ileS isoleucyl-tRNA synthetase ebA4448 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56478227 Common gspJ2 general secretory pathway protein J ebA4906 14 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 56476332 Common pcm putative protein-L-isoaspartate o-methyltransferase ebA1645 157 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 56478303 Common - putative MFS transporter ebA5055 78 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56479073 Nonpathogen - fragment of putative aminogylcoside resistance protein ebD119 2 COG2746 COG2746, Aminoglycoside N3'-acetyltransferase Defense mechanisms 56476746 Common tnpF7 transposition helper protein, fragment c1A70 9 None None None 56476168 Common - hypothetical protein ebA1348 31 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 56478438 Common bcrD benzoyl CoA reductase subunit ebA5286 65 COG1924 COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Lipid metabolism 56477092 Common - hypothetical protein ebA2942 21 None None None 56476802 Common - conserved plasmid related protein ebA2431 17 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 56476738 Common - hypothetical protein c1A56 80 COG2440 FixX, Ferredoxin-like protein Energy production and conversion 56478089 Common - putative Sigma-54 dependent transcriptional regulator ebA4696 172 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56477254 Common istB transposase, IS5 family ebA3227 47 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56476262 Nonpathogen - hypothetical protein ebA1507 6 None None None 56478364 Common fnr transcription factor Fnr ebA5149 143 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56478721 Common tnp46 transposase, is4 family ebA5786 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56476728 Common rph ribonuclease PH c1A232 180 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 56477800 Common trpE anthranilate synthase component I ebA4177 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 56479012 Common - hypothetical protein ebB223 144 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 56478770 Common - hypothetical protein ebD100 36 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 56476190 Common - predicted Zn-dependent peptidase ebA1394 194 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 56477711 Common - CcdB-like toxin protein ebA4007 13 None None None 56476979 Common proQ predicted ProQ activator of osmoprotectant transporter ProP ebA2747 18 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 56477295 Common - conserved hypothetical protein, possible small subunit of monooxygenase ebA3298 12 None None None 56478354 Common - putative iron-sulfur 4Fe-4S ferredoxin transmembrane protein ebA5135 82 COG0348 NapH, Polyferredoxin Energy production and conversion 56477189 Common - conserved hypothetical protein, possibly related to phenol metabolism ebA3127 24 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 56476848 Common - hypothetical protein ebB78 11 None None None 56478691 Common paaJ beta-ketoadipyl CoA thiolase ebA5729 181 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56479359 Nonpathogen - hypothetical protein ebA6874 1 None None None 56475903 Common nirH NIRH ebA878 45 COG1522 Lrp, Transcriptional regulators Transcription 56477540 Common - putative gntR-family transcriptional regulator ebA3736 143 COG1802 GntR, Transcriptional regulators Transcription 56478324 Common rpsT 30S ribosomal protein S20 ebB177 126 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 56475666 Nonpathogen - hypothetical protein ebA449 1 None None None 56477624 Nonpathogen - hypothetical protein ebB135 2 None None None 56477547 Common - hypothetical protein ebA3745 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 56475591 Common - alcohol dehydrogenase ebA303 187 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 56476161 Common - hypothetical protein ebA1336 208 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 56477750 Common hrpA ATP-dependent RNA helicase protein ebA4074 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 56475669 Nonpathogen - hypothetical protein ebA459 1 None None None 56476402 Nonpathogen - hypothetical protein ebA1779 1 None None None 56477137 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase ubiE ebA3016 197 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56477517 Common - predicted Enoyl-CoA hydratase/carnithine racemase ebA3691 172 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56478587 Common lepA GTP-binding protein LepA ebA5535 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 56476688 Common mcrA penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein ebA2268 201 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 56477381 Common - putative outer membrane protein ebA3445 108 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56477465 Common - hypothetical protein ebA3587 14 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 56475980 Common - hypothetical protein ebA1037 130 COG4664 FcbT3, TRAP-type mannitol/chloroaromatic compound transport system, large permease component Secondary metabolites biosynthesis, transport, and catabolism 56477084 Common fdhC putative Formate dehydrogenase subunit C ebA2933 69 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 56479286 Nonpathogen - hypothetical protein ebA6728 1 None None None 56477573 Common caiB predicted acyl-CoA transferase ebA3792 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56479404 Nonpathogen - hypothetical protein ebA6967 1 None None None 56476938 Common istAp probable transposase, fragment ebA2669 35 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475893 Common pheT phenylalanyl-tRNA synthetase beta chain ebA867 223 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 56478397 Common - hypothetical protein ebA5220 14 None None None 56479303 Common - transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) ebA6755 176 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 56476365 Nonpathogen - antitoxin of toxin-antitoxin stability system ebD39 4 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 56477816 Common - hypothetical protein ebA4202 92 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 56479007 Nonpathogen - hypothetical protein ebA6245 1 None None None 56475990 Nonpathogen - hypothetical protein ebA1053 1 None None None 56478649 Common - transcriptional regulatory protein of IclR family ebA5646 88 COG1414 IclR, Transcriptional regulator Transcription 56477080 Common - major facilitator superfamily transporter ebA2917 160 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 56478127 Common - conserved hypothetical protein, putative Peptidase M48 ebA4755 123 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 56477825 Common coxA cytochrome C oxidase, subunit 1 ebA4228 173 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 56478461 Common - putative 3-hydroxyacyl-CoA dehydrogenase precursor ebA5320 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56476418 Common - ABC transporter, periplasmic binding protein precursor ebA1814 177 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 56478195 Common - predicted integral membrane protein ebA4859 37 COG5473 COG5473, Predicted integral membrane protein Function unknown 56478014 Common - hypothetical protein ebD84 7 None None None 56476809 Nonpathogen - hypothetical protein ebA2441 1 None None None 56479490 Common - diheme cytochrome c ebA7150 16 None None None 56477377 Common - DNA-binding response regulator ebA3439 208 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478881 Nonpathogen - hypothetical protein ebA6031 1 None None None 56475766 Common - hypothetical protein ebA639 7 COG2944 COG2944, Predicted transcriptional regulator Transcription 56478952 Common - putative electron transfer flavoprotein-ubiquinone oxidoreductase ebA6155 107 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 56475760 Nonpathogen - hypothetical protein ebA627 1 None None None 56477441 Common paaE probable ring-hydroxylation complex protein 4 ebA3553 142 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 56476381 Common pilG type IV pilus response regulator PilG ebB49 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56476919 Common fpr ferredoxin-NADP+ reductase ebA2634 116 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 56475677 Common - dihydroxy-acid dehydratase ebA478 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 56476090 Nonpathogen - hypothetical protein ebA1229 2 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 56478816 Nonpathogen - hypothetical protein ebA5938 1 None None None 56478050 Common - hypothetical protein of beta-lactamase-inhibitor family (Pfam) ebB157 7 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 56477910 Common cfA cyclopropane fatty acyl phospholipid synthase ebA4362 131 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 56475818 Common int phage integrase ebA751 78 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56475988 Common - peptidase family M23 protein ebA1051 116 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 56477457 Common cutA1 divalent cation tolerance protein ebA3572 116 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 56476354 Common fdh glutathione-dependent formaldehyde dehydrogenase ebA1699 206 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 56477867 Common - putative exopolysaccharide export protein,possibly related with succinoglycan synthesis ebA4295 75 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 56478606 Common istA transposase ebA5563 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476182 Common nagK fumarylpyruvate hydrolase ebA1377 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 56475868 Common - predicted membrane protein ebA828 53 COG4327 COG4327, Predicted membrane protein Function unknown 56477131 Common atpA F0F1 ATP synthase subunit alpha ebA3004 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 56477318 Nonpathogen - possible pseudogene (fragment) of probable glycoside hydrolase, family 10 (Interpro) ebA3334 1 None None None 56477846 Common - hypothetical protein ebA4259 29 COG2348 COG2348, Uncharacterized protein involved in methicillin resistance Defense mechanisms 56476210 Common - predicted phospholipase A2 ebA1422 190 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56477525 Common - hypothetical protein, similarity to Flp pilus assembly protein TadG ebA3710 8 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 56475853 Nonpathogen - hypothetical protein ebD33 1 None None None 56475606 Common - putative transporter ebA327 100 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 56476197 Common lolB putative lipoprotein localization protein LolB ebA1404 31 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 56476005 Common phoU conserved hypothetical protein, predicted phoU family ebA1083 201 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 56477035 Common dnaN DNA polymerase III (Beta chain) ebA2847 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 56478854 Common frr ribosome recycling factor ebA5990 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 56477803 Common - uncharacterized protein involved in exopolysaccharide biosynthesis ebA4180 22 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 56477004 Nonpathogen - hypothetical protein ebA2790 1 None None None 56477575 Common - complex two-component hybrid sensor component containing histidine kinase and response receiver domain ebA3794 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56477100 Common def peptide deformylase ebB91 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 56478663 Common - conserved hypothetical protein, probable small subunit of thiolase encoded by ebA5673 ebB200 55 COG1545 COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon General function prediction only 56476012 Common prk phosphoribulokinase ebA1099 51 COG3954 PrkB, Phosphoribulokinase Energy production and conversion 56479230 Common int integrase or site-specific recombinase ebA6644 131 COG0582 XerC, Integrase DNA replication, recombination, and repair 56476139 Common - ATP-binding ABC transporter protein ebA1306 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 56478611 Nonpathogen - hypothetical protein ebA5572 1 None None None 56477155 Common - hypothetical protein ebD70 59 COG2921 COG2921, Uncharacterized conserved protein Function unknown 56476050 Common argH argininosuccinate lyase ebA1170 236 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 56477439 Common paaC putative ring-hydroxylation complex protein 2 ebA3550 42 COG3396 COG3396, Uncharacterized conserved protein Function unknown 56475484 Nonpathogen - hypothetical protein ebD25 1 None None None 56475776 Common parE DNA topoisomerase IV subunit B ebA661 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 56476122 Common tatC Sec-independent protein translocase subunit C ebA1285 203 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 56478634 Common nagI putative gentisate 1,2-dioxygenase oxidoreductase protein ebA5613 34 COG3435 COG3435, Gentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 56477535 Nonpathogen - hypothetical protein ebA3722 1 None None None 56476838 Common istA transposase ebA2485 70 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477469 Common modB1 molybdate or tungstate transport ebA3597 62 COG2998 TupB, ABC-type tungstate transport system, permease component Coenzyme metabolism 56477919 Common - hypothetical protein ebA4376 116 COG2606 EbsC, Uncharacterized conserved protein Function unknown 56477636 Nonpathogen - hypothetical protein ebA3877 1 COG1980 COG1980, Archaeal fructose 1,6-bisphosphatase Carbohydrate transport and metabolism 56477611 Common rpsE 30S ribosomal protein S5 ebA3844 247 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 56476659 Nonpathogen - hypothetical protein ebA2213 1 None None None 56478922 Nonpathogen - hypothetical protein ebA6100 4 None None None 56476947 Nonpathogen - hypothetical protein ebA2686 1 None None None 56475734 Common - predicted subtilase ebA578 142 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 56477196 Common ppcC phenylphosphate carboxylase, gamma subunit ebD6 102 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 56477186 Common ribA GTP cyclohydrolase II ebA3120 191 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 56475589 Common pchF probable p-cresol methylhydroxylase subunit ebA300 141 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56477939 Common mrp Mrp-ATPase involved in chromosome partitioning ebA4409 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56479394 Common - putative Phospholipase/Transphosphatidylase ebA6946 84 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 56479483 Common psd phosphatidylserine decarboxylase ebA7135 93 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 56478616 Common - conserved hypothetical protein, predicted Rhodopsin-like GPCR superfamily ebA5582 162 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 56479298 Nonpathogen - hypothetical protein ebA6748 1 None None None 56476134 Common hisG ATP phosphoribosyltransferase catalytic subunit ebA1300 213 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 56475755 Common - hypothetical protein ebA616 4 None None None 56475999 Common - putative hydrolase ebA1070 49 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 56476078 Common narA assimilatory nitrate reductase ebA1211 189 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 56476962 Common modC molybdenum import ATP-binding protein ebA2719 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 56479107 Common int integrase or site-specific recombinase ebA6415 91 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56478137 Common trpA tryptophan synthase subunit alpha ebA4776 217 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 56478644 Common - acyl-CoA transferase, family III ebA5640 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56478749 Common - hypothetical protein ebA5831 4 None None None 56475975 Common - hypothetical protein ebA1030 60 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 56479181 Common - hypothetical protein ebA6549 67 COG1355 COG1355, Predicted dioxygenase General function prediction only 56476652 Nonpathogen - hypothetical protein ebA2200 1 None None None 56476300 Common - hypothetical protein ebA1583 10 COG1442 RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases Cell envelope biogenesis, outer membrane 56476755 Common - hypothetical protein, putative transport protein c1A90 40 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 56477476 Common - probable sodium/solute symporter ebA3608 182 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 56477759 Common - predicted AAA ATPase superfamily ebA4101 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 56478786 Common wbjB hypothetical protein ebA5885 204 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56477614 Common secY preprotein translocase subunit SecY ebA3846 241 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 56478555 Common - hypothetical protein, possibly phage-related ebD93 6 None None None 56478340 Common pilE pilus assembly protein ebD88 21 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 56478377 Common qhpA quinohemoprotein amine dehydrogenase 60 kDa subunit ebA5178 5 None None None 56478909 Nonpathogen - hypothetical protein ebA6084 1 None None None 56476466 Common - bacterial transferase c2A179 199 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 56479318 Common relB damage inducible-like protein, Anti-RelE antitoxin ebB237 31 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 56478000 Common - hypothetical protein ebA4521 14 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 56476113 Common - predicted Fe-S-cluster redox enzyme ebA1268 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 56476731 Common - protease IV c1A237 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56477724 Common - hypothetical protein ebA4033 32 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 56477649 Nonpathogen - hypothetical protein ebA3897 1 None None None 56475521 Common coxB chain II protein of putative cytochrome c oxidase ebA158 161 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 56479186 Common - hypothetical protein ebB231 23 None None None 56477355 Common rpoN1 RNA polymerase factor sigma-54 ebA3393 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 56477737 Common - hypothetical protein ebA4054 16 None None None 56479263 Common sdhD succinate dehydrogenase (membrane anchor subunit) ebB235 50 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 56476042 Common purD phosphoribosylamine-glycine ligase ebA1155 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 56478177 Common nuoB NADH dehydrogenase subunit B ebA4835 191 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 56479459 Common - hypothetical protein, predicted transcription regulator ebA7092 26 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 56475926 Common serC phosphoserine aminotransferase ebA907 117 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 56476241 Common - hypothetical protein ebA1464 60 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 56479092 Common btuE putative glutathione peroxidase protein ebA6393 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 56478878 Common - hypothetical protein ebA6028 2 None None None 56475632 Common - hypothetical protein ebA377 23 None None None 56475824 Common - hypothetical protein ebB20 7 None None None 56475683 Common int phage-related integrase ebA492 221 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56478543 Common acpP acyl carrier protein ebD12 183 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476188 Common ftsE cell division ATP-binding protein ftsE, ABC transporter ATP-binding protein ebA1390 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 56475973 Common aroG phospho-2-dehydro-3-heoxyheptonate aldolase ebA1026 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 56476448 Common - hypothetical protein ebA1861 24 COG3470 Tpd, Uncharacterized protein probably involved in high-affinity Fe2+ transport Inorganic ion transport and metabolism 56477262 Common tnp30 transposase, IS5 family ebA3243 49 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56476558 Common NPY1 NTP pyrophosphohydrolase containing a Zn-finger,probably nucleic-acid-binding ebA2022 122 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 56476555 Nonpathogen - hypothetical protein ebA2017 1 None None None 56475693 Common - hypothetical protein ebA510 12 COG1396 HipB, Predicted transcriptional regulators Transcription 56479258 Common kgd alpha-ketoglutarate decarboxylase ebA6685 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 56478492 Common marR bacterial regulatory protein, MarR ebA5386 120 COG1846 MarR, Transcriptional regulators Transcription 56476810 Nonpathogen - hypothetical protein ebA2442 2 None None None 56477871 Nonpathogen - hypothetical protein, possible esterase/lipase/thioesterase ebA4300 9 COG2267 PldB, Lysophospholipase Lipid metabolism 56479190 Nonpathogen - hypothetical protein ebA6568 1 None None None 56476533 Common aidB acyl-CoA dehydrogenase ebA1985 144 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56479111 Nonpathogen - hypothetical protein ebA6422 2 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 56476481 Common - hypothetical protein c2A308 24 COG3177 COG3177, Uncharacterized conserved protein Function unknown 56476065 Common fbp fructose-1,6-bisphosphatase ebA1191 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 56476209 Common apaG ApaG ebA1421 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 56477324 Common istB transposition helper protein ebB105 7 None None None 56475467 Common - hypothetical protein ebD24 8 None None None 56476325 Common - predicted ATPase (AAA+ superfamily) ebA1629 52 COG1373 COG1373, Predicted ATPase (AAA+ superfamily) General function prediction only 56476567 Common - probable TetR-family transcriptional regulator ebA2046 115 COG1309 AcrR, Transcriptional regulator Transcription 56479507 Nonpathogen - hypothetical protein ebA7176 1 None None None 56478867 Common spoU tRNA/rRNA methyltransferase ebA6008 182 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 56479530 Common prpE propionate-CoA ligase ebA7220 212 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476368 Common - predicted phosphatase ebA1724 66 COG3211 PhoX, Predicted phosphatase General function prediction only 56475782 Common - hypothetical protein ebA669 92 COG3177 COG3177, Uncharacterized conserved protein Function unknown 56477283 Nonpathogen - hypothetical protein ebA3282 1 None None None 56477099 Common fmt methionyl-tRNA formyltransferase ebA2954 226 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 56477699 Common msbA predicted ABC-type multidrug transport system protein ebA3992 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 56478149 Common dnaJ chaperone protein DnaJ ebA4793 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56479212 Common - hypothetical protein ebA6601 7 None None None 56478574 Nonpathogen - hypothetical protein ebA5509 1 None None None 56479030 Common narJ chaperone ebA6283 56 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 56479434 Common trxB FAD-dependent pyridine nucleotide-disulphide oxidoreductase ebA7042 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 56477869 Common fadD AMP-generating CoA ligase ebA4297 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56478774 Nonpathogen - hypothetical protein ebA5869 1 None None None 56477537 Common - putative response regulator ebA3727 130 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56478427 Common - hypothetical protein ebA5268 69 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 56478233 Common gspD2 general secretory pathway protein D ebA4915 140 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 56477405 Common - hypothetical protein ebA3490 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56475626 Common istB transposase/IS protein ebA366 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476925 Common tolQ TOLQ-related transport transmembrane protein ebA2644 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 56475470 Common dtd D-tyrosyl-tRNA deacylase ebA64 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 56476467 Common tdiR/tcr3 two-component response regulator c2A300 203 COG4566 TtrR, Response regulator Signal transduction mechanisms 56477931 Nonpathogen - hypothetical protein ebA4397 1 None None None 56477222 Common - putative amino acid ABC transporter ebA3175 146 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56475815 Common bcrC benzoyl CoA reductase subunit ebA748 36 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 56478282 Common - iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase ebA5004 159 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 56478626 Common - hypothetical protein ebA5604 77 COG3211 PhoX, Predicted phosphatase General function prediction only 56477018 Common can carbonic anhydrase, beta family ebA2817 135 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 56479550 Common - hypothetical protein ebA7261 84 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56478951 Common - hypothetical protein ebA6153 10 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56476345 Common tolC outer membrane channel protein ebA1679 115 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56479485 Common - hypothetical protein, INTERPRO suggestion: probable Sugar transporter superfamily ebA7139 4 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 56477858 Common - conserved hypothetical membrane protein; potential lipid A core-O-antigen ligase ebA4277 28 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 56479565 Common - hypothetical protein ebB252 7 None None None 56477002 Nonpathogen - hypothetical protein ebA2788 1 None None None 56478420 Nonpathogen - hypothetical protein ebB185 1 None None None 56476891 Common rnfH protein rnfH ebA2586 67 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 56476479 Common - sugar dehydratase c2A203 41 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56479139 Common - CheY-like response regulator domain ebD118 224 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 56476839 Common intF phage-related integrase, fragmentary gene ebA2486 77 None None None 56477141 Common - hypothetical protein ebA3023 8 None None None 56478222 Nonpathogen - hypothetical protein ebA4894 1 None None None 56477545 Common pccA propionyl-CoA carboxylase, alpha subunit ebA3743 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 56479319 Nonpathogen - hypothetical protein ebA6787 4 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 56477922 Common holA DNA polymerase III subunit delta ebA4383 81 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 56477495 Common - enoyl-CoA hydratase ebA3642 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56478706 Common - putative oxidoreductase, Zinc-containing alcohol dehydrogenase ebA5761 198 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 56475879 Common obgE GTPase ObgE ebA843 249 COG0536 Obg, Predicted GTPase General function prediction only 56476711 Common - probable phospholipase C (plcA) ebA2305 29 COG4101 COG4101, Predicted mannose-6-phosphate isomerase Carbohydrate transport and metabolism 56478117 Common rho transcription termination factor Rho ebA4743 211 COG1158 Rho, Transcription termination factor Transcription 56477284 Common - hypothetical protein ebA3283 102 COG1518 COG1518, Uncharacterized protein predicted to be involved in DNA repair DNA replication, recombination, and repair 56478498 Nonpathogen padD phenylacetyl-CoA:acceptor oxidoreductase ebA5396 3 COG3302 DmsC, DMSO reductase anchor subunit General function prediction only 56477782 Nonpathogen - hypothetical protein ebD81 5 None None None 56479287 Nonpathogen - hypothetical protein ebA6730 4 None None None 56479405 Common - hypothetical protein, possibly lipoprotein ebA6968 12 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 56478594 Common acpS phosphopantetheinyl transferase (holo-ACP synthase) ebB196 149 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 56478911 Nonpathogen - hypothetical protein ebA6088 1 None None None 56477279 Common istA transposase ebA3277 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478601 Common - putative potassium uptake protein, TrkA family ebA5556 99 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 56478468 Common - conserved hypothetical protein, of thioesterase family ebA5330 69 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 56477045 Nonpathogen - hypothetical protein ebA2859 1 None None None 56477677 Common - predicted SAM-dependent methyltransferase ebA3956 133 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 56478403 Common - hypothetical protein ebA5226 10 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 56478239 Nonpathogen - hypothetical protein ebA4925 1 None None None 56479532 Common - predicted Zinc-containing alcohol dehydrogenase ebA7223 123 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 56477450 Nonpathogen - hypothetical protein ebB117 1 None None None 56479154 Common - acyl-CoA dehydrogenase ebA6506 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56478366 Common - hypothetical protein ebA5153 62 COG2836 COG2836, Uncharacterized conserved protein Function unknown 56479330 Common - conserved hypothetical protein, potential squalene/phytoene dehydrogenase ebA6811 47 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 56476390 Common pyrX dihydroorotase ebA1760 205 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 56476238 Common pyrC dihydroorotase ebA1456 97 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 56477781 Common lysR transcriptional regulator, LysR family ebA4142 152 COG0583 LysR, Transcriptional regulator Transcription 56477731 Common - putative patatin ebA4044 62 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 56476237 Nonpathogen - hypothetical protein ebA1455 1 None None None 56478187 Common nuoL NADH dehydrogenase I, chain L ebA4846 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 56475688 Common int phage-related integrase ebA499 208 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56478315 Nonpathogen - hypothetical protein ebA5079 1 None None None 56478439 Common bcrA benzoyl CoA reductase subunit ebA5287 63 COG1924 COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Lipid metabolism 56476762 Common apc1 possible subunit of acetophenone carboxylase c1A105 117 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56477392 Nonpathogen - hypothetical protein ebA3462 1 None None None 56476038 Common pepP putative XAA-PRO aminopeptidase ebA1146 235 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 56478586 Common int integrase ebA5534 113 COG0582 XerC, Integrase DNA replication, recombination, and repair 56479523 Nonpathogen - hypothetical protein ebA7208 1 None None None 56478102 Common acxR Sigma-54 dependent transcriptional activator ebA4722 178 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 56479352 Common - hypothetical protein ebA6857 21 COG5592 COG5592, Uncharacterized conserved protein Function unknown 56477146 Nonpathogen - hypothetical protein ebA3032 1 None None None 56477278 Nonpathogen - hypothetical protein ebA3276 1 None None None 56477094 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A ebA2945 141 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 56476775 Common - hypothetical protein ebA2397 22 None None None 56476618 Common - hypothetical protein ebD55 7 None None None 56478808 Common - hypothetical protein ebA5924 15 COG4190 COG4190, Predicted transcriptional regulator Transcription 56479074 Common - predicted serine-pyruvate aminotransferase ebA6365 116 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 56476749 Common tcr1 two-component response regulator c1A77 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56479014 Common - hypothetical protein ebD112 31 COG5473 COG5473, Predicted integral membrane protein Function unknown 56478519 Common - putative hydrolase/peptidase ebA5427 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 56477957 Common amiC N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein ebA4451 179 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 56475746 Common - glycosyltransferase family protein ebA602 41 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 56476663 Nonpathogen - hypothetical protein ebA2226 1 None None None 56477638 Common - putative PIRIN-like protein ebA3881 148 COG1741 COG1741, Pirin-related protein General function prediction only 56478500 Common padF phenylglyoxylate:acceptor oxidoreductase ebB191 60 COG1144 COG1144, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit Energy production and conversion 56479457 Common - hypothetical protein ebA7089 2 None None None 56476771 Common - hypothetical protein ebA2393 4 COG2405 COG2405, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56476692 Common rmlD putative dTDP-4-keto-L-rhamnose reductase ebA2273 175 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 56475477 Common tnp1 putative transposase, is4 family ebA75 28 None None None 56475516 Common - putative pterin-4-alpha-carbinolamine dehydratase ebB5 86 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 56476226 Common murC UDP-N-acetylmuramate--L-alanine ligase ebA1443 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 56475932 Common - peptidase family protein ebA932 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 56479410 Common - predicted N-formylglutamate amidohydrolase ebA6983 25 COG3931 COG3931, Predicted N-formylglutamate amidohydrolase Amino acid transport and metabolism 56477274 Nonpathogen - hypothetical protein ebA3262 2 None None None 56476837 Common istB transposition helper protein ebA2484 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56479039 Common - hypothetical protein ebA6298 47 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 56477522 Common - probable secretion ATPase protein,similar to bacterial type II secretion system protein E ebA3705 163 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 56477943 Common thyA thymidylate synthase ebA4415 138 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 56476269 Common rffG DTDP-glucose 4,6-dehydratase ebA1518 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 56475575 Common istB transposition helper protein ebA270 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477114 Common - hypothetical protein ebA2980 9 None None None 56478066 Common chrA1 hypothetical protein, similar to chromate transport protein ChrA ebA4646 34 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 56477159 Common rep hypothetical protein ebA3053 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 56478415 Common - hypothetical protein ebA5249 20 None None None 56479256 Common ldp dihydrolipoamide dehydrogenase ebA6683 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 56475910 Common nirS cytochrome cd1 nitrite reductase precursor ebA888 20 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56477889 Nonpathogen - hypothetical protein ebA4328 10 None None None 56478624 Nonpathogen - hypothetical protein ebA5600 1 None None None 56476621 Nonpathogen - hypothetical protein ebD58 1 None None None 56479308 Common - hypothetical heme-thiolate monooxygenase ebA6767 62 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 56477474 Common hcrC 4-hydroxybenzoyl-CoA reductase, gamma subunit ebA3604 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 56475533 Nonpathogen - hypothetical protein ebA175 12 None None None 56477197 Common ppcB beta subunit of phenylphosphate carboxylase ebA3141 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 56475701 Common - hypothetical protein ebA521 7 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56476501 Nonpathogen tnpF5 small fragment of transposase gene ebD3 2 None None None 56478005 Nonpathogen - hypothetical protein ebA4532 1 None None None 56476028 Common prlC peptidase family M3 protein ebA1131 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 56477717 Common RSC2398 ATP-binding ABC transporter protein ebA4020 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 56475651 Common - hypothetical protein ebA415 21 None None None 56477483 Common kup potassium uptake protein ebA3621 89 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 56477884 Nonpathogen - hypothetical protein ebA4321 1 None None None 56478120 Common fdxA ferredoxin ebA4746 145 COG1146 COG1146, Ferredoxin Energy production and conversion 56475804 Common hbcL 3-hydroxybenzoate CoA ligase ebA727 223 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476647 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 ebA2188 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 56477248 Common istB putative transposase helper protein ebB98 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476808 Common - hypothetical protein ebA2440 21 None None None 56476024 Common - outer membrane lipoprotein containing OmpA/MotB domain ebA1121 175 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56475943 Common - hypothetical protein ebA955 74 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56478994 Common - hypothetical protein ebA6224 5 None None None 56479526 Common moeY hypothetical protein, possible molybdopterin biosynthesis protein MoeY ebA7214 15 COG0778 NfnB, Nitroreductase Energy production and conversion 56476440 Nonpathogen - hypothetical protein ebA1852 1 None None None 56478486 Common - Sigma-54 dependent DNA-binding response regulator ebA5375 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56475963 Common - sensor protein with histidine kinase domain ebA999 210 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56477788 Common dctR two-component response regulator ebA4154 190 COG4566 TtrR, Response regulator Signal transduction mechanisms 56477296 Common - potential extradiol-cleaving dioxygenase of dihydroxy-substituted aromatic compound ebB100 33 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 56475564 Nonpathogen - hypothetical protein ebA244 1 None None None 56476493 Common istB transposition helper protein c2A227 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478886 Common rbr rubrerythrin/nigerythrin-like protein ebA6038 79 COG1592 COG1592, Rubrerythrin Energy production and conversion 56475978 Common - putative exported solute binding protein ebA1033 92 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 56477346 Common cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase ebA3379 196 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 56477269 Nonpathogen - hypothetical protein ebA3255 1 None None None 56476718 Common - fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase ebA2315 161 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56478793 Common wecE predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis ebA5900 190 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 56477774 Common - predicted phospholipase D/transphosphatidylase protein ebA4127 147 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 56478561 Common - phage terminase large subunit ebA5488 38 COG4626 COG4626, Phage terminase-like protein, large subunit General function prediction only 56477896 Common aspS aspartyl-tRNA synthetase ebA4339 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56476690 Common lysA diaminopimelate decarboxylase ebA2271 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 56478347 Common - probable short-chain dehydrogenase ebA5126 234 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56478204 Common marR transcriptional regulator(MarR family) ebA4868 93 COG1846 MarR, Transcriptional regulators Transcription 56477826 Common - cytochrome C oxidase assembly protein ebA4229 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 56476152 Nonpathogen - hypothetical protein ebA1322 1 None None None 56478243 Common tnp38 transposase (IS4) ebA4933 29 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56477984 Common glcF glycolate oxidase iron-sulfur subunit ebA4492 161 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 56478839 Nonpathogen - conserved hypothetical protein, antitoxin of prevent-host-death family ebB210 3 None None None 56475444 Nonpathogen - hypothetical protein ebA26 1 None None None 56478250 Common - putative PhoH-related protein ebA4946 191 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 56477218 Common livG Leucine/isoleucine/valine transport system ATP-binding protein ebA3169 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56475438 Nonpathogen - hypothetical protein ebA8 5 None None None 56477641 Common tsaR probable tartronic semialdehyde reductase ebA3883 165 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 56478916 Nonpathogen - hypothetical protein ebA6093 1 None None None 56478038 Common - hypothetical protein ebA4594 9 None None None 56476157 Common glyS glycyl-tRNA synthetase beta chain ebA1330 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 56475725 Nonpathogen - hypothetical protein ebA561 1 None None None 56479200 Common - hypothetical protein ebA6581 45 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 56476414 Common - ferric uptake regulator ebA1809 73 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 56479226 Common traH hypothetical protein ebA6635 24 None None None 56477666 Common - hypothetical protein ebA3932 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 56478432 Common - probableacetyltransferase/hydrolase ebA5275 20 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 56475639 Common - hypothetical protein ebA395 9 None None None 56478456 Common - TetR-family transcriptional regulator ebA5314 141 COG1309 AcrR, Transcriptional regulator Transcription 56478900 Common rpoE3 RNA polymerase sigma factor ebA6072 125 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 56475630 Common - hypothetical protein ebA371 4 None None None 56478389 Common engC ribosome-associated GTPase ebA5204 163 COG1162 COG1162, Predicted GTPases General function prediction only 56475546 Nonpathogen - hypothetical protein ebA196 1 None None None 56477014 Common metW methionine biosynthesis MetW, subunit of homoserine-O-acetyltransferase ebA2809 63 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56475619 Common nuc1 putative DNA/RNA NON-specific endonuclease ebA353 41 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 56475872 Common aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein ebA835 29 COG4579 COG4579, Isocitrate dehydrogenase kinase/phosphatase Signal transduction mechanisms 56476103 Common - Band 7 protein ebA1253 182 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 56477041 Common istB transposition helper protein ebA2855 16 None None None 56478097 Common - hypothetical protein ebA4715 10 None None None 56478285 Nonpathogen - hypothetical protein ebA5010 1 None None None 56477289 Common - hypothetical protein ebA3290 34 None None None 56478825 Nonpathogen - hypothetical protein ebA5951 1 None None None 56479246 Common clpB ClpB protein ebA6667 223 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 56476177 Nonpathogen - hypothetical protein ebA1365 1 None None None 56478309 Common - hypothetical protein ebB175 160 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 56475723 Common phaC putative monovalent cation/H+ antiporter subunit C ebB15 82 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 56478696 Common hutI imidazolonepropionase ebA5740 99 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 56476399 Common - putative oxidoreductase protein ebA1775 72 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56476920 Common - conserved hypothetical protein, predicted auxin efflux carrier family ebA2636 102 COG0679 COG0679, Predicted permeases General function prediction only 56475593 Common tioL lipid-transfer protein ebA306 160 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56476991 Common boxB benzoyl-CoA oxygenase component B ebA2765 16 COG3396 COG3396, Uncharacterized conserved protein Function unknown 56475833 Nonpathogen - hypothetical protein ebA772 1 None None None 56477550 Common - putative transcriptional regulator ebA3750 74 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 56478069 Common - hypothetical protein ebA4652 2 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 56478154 Nonpathogen - putative transmembrane protein ebB166 2 COG1950 COG1950, Predicted membrane protein Function unknown 56475524 Common - sensory box/GGDEF family protein ebA163 196 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56477076 Nonpathogen - hypothetical protein ebA2910 1 None None None 56477120 Nonpathogen - hypothetical protein ebA2991 1 None None None 56476355 Common - conserved hypothetical protein, ribonuclease BN falily ebA1700 61 COG1295 Rbn, Predicted membrane protein Function unknown 56476702 Common pyrF orotidine 5'-phosphate decarboxylase ebA2293 82 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 56477423 Common ccmH cytochrome C biogenesis protein ebA3525 91 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 56476346 Common - putative metal-dependent phosphohydrolase,possibly cGMP-dependent 3',5'-cyclic phosphodiesterase ebA1682 119 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 56475658 Common - hypothetical protein ebA427 8 None None None 56478742 Common rec2 DNA internalization-related competence protein ComEC/Rec2 ebA5822 162 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 56479339 Common - conserved hypothetical protein, putative s1 rna binding domain protein ebA6834 162 COG2183 Tex, Transcriptional accessory protein Transcription 56476002 Common cytC3 di-Heme Cytochrome c, class IC ebA1075 63 COG2863 COG2863, Cytochrome c553 Energy production and conversion 56476039 Common ubiH 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase ebA1148 112 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 56478095 Common - predicted exporters of the RND superfamily ebA4709 59 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 56479043 Nonpathogen - hypothetical protein ebB225 1 None None None 56479466 Common purM phosphoribosylaminoimidazole synthetase ebA7104 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 56476508 Common int phage-related integrase ebA1946 218 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56476793 Common - hypothetical protein ebA2418 3 None None None 56476885 Common rnfA predicted electron transport subunit of NADH:ferredoxin oxidoreductase ebA2575 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 56477397 Common cspD probably cold shock transcription regulator protein ebA3470 182 COG1278 CspC, Cold shock proteins Transcription 56476518 Common aliA cyclohexanecarboxylate-CoA ligase ebA1960 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56477833 Common ctaB protoheme IX farnesyltransferase ebA4237 166 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 56478711 Common - hypothetical protein ebA5768 18 None None None 56477236 Nonpathogen - hypothetical protein ebA3196 1 None None None 56476789 Common - hypothetical protein ebA2414 20 None None None 56476912 Common cysD sulfate adenylyltransferase subunit 2 ebA2625 125 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 56476811 Common - hypothetical protein ebA2443 197 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 56478055 Common betB putative betaine aldehyde dehydrogenase (BADH) oxidoreductase protein ebA4621 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56479477 Common - putative transmembrane protein ebB245 38 COG1714 COG1714, Predicted membrane protein/domain Function unknown 56477559 Common tnp33 transposase ebA3769 57 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478970 Common - hypothetical protein ebA6183 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 56479196 Common - hypothetical protein ebA6577 19 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 56476061 Common groEL chaperonin GroEL ebA1185 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 56478180 Common nuoE NADH dehydrogenase subunit E ebA4838 156 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 56475771 Common - putative endonuclease ebA647 39 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 56476884 Nonpathogen - hypothetical protein ebA2572 1 COG3086 RseC, Positive regulator of sigma E activity Signal transduction mechanisms 56476941 Common tnp27 transposase, is4 family ebA2673 28 None None None 56476867 Common tnp25 transposase ebA2535 74 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478255 Common - aldehyde dehydrogenase family protein ebA4954 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56475991 Common - glutaredoxin protein ebA1054 120 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 56475847 Common - response regulator receiver protein ebA793 211 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56477972 Nonpathogen - hypothetical protein ebA4475 1 None None None 56478800 Common - putative HNS-like transcription regulator protein ebB205 21 COG2916 Hns, DNA-binding protein H-NS General function prediction only 56475559 Nonpathogen - hypothetical protein ebA229 1 None None None 56477033 Common rpmH 50S ribosomal protein L34 ebC7 13 None None None 56476006 Common - hypothetical protein ebA1085 3 None None None 56475895 Common rplT 50S ribosomal protein L20 ebB25 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 56476658 Common - hypothetical protein ebA2212 13 COG1873 COG1873, Uncharacterized conserved protein Function unknown 56475435 Nonpathogen - hypothetical protein ebA5 1 None None None 56477006 Common manX phosphotransferase, mannose/fructose-specific component IIA ebA2794 87 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 56478214 Common rnfC electron transport complex protein RnfC ebA4883 86 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 56475538 Common norE putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein ebA182 156 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 56477568 Nonpathogen - hypothetical protein ebA3783 1 None None None 56479053 Common norE putative denitrification protein NorE ebA6329 154 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 56479203 Common istB probable transposase ebB232 40 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475935 Common rpsI 30S ribosomal protein S9 ebA937 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 56477462 Common - putative glutathione S-transferase ebA3583 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56477738 Common rsuA propable 16S pseudouridylate synthase ebA4056 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 56477053 Common ggt gamma-glutamyltranspeptidase precursor ebA2869 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 56477991 Common - ATP-dependent RNA helicase ebA4502 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 56477125 Nonpathogen - hypothetical protein ebA2997 1 None None None 56477179 Common rlpA putative rare lipoprotein A ebA3092 134 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 56475608 Common - hypothetical protein ebA332 18 None None None 56476033 Common pdxA pyridoxal phosphate biosynthesis protein ebA1139 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 56475840 Common pcm1 protein-L-isoaspartate(D-aspartate) O-methyltransferase ebA781 154 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 56478126 Common - putative transporter ebA4754 84 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56476687 Common pilM type IV fimbrial biogenesis protein PilM ebA2266 78 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 56477242 Common cpx cytochrome C peroxidase ebA3202 94 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 56476939 Common istBp probable transposition helper protein, N-terminal fragment ebB85 40 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477518 Common - hypothetical protein ebA3695 137 COG4147 DhlC, Predicted symporter General function prediction only 56479495 Common - hypothetical protein ebA7156 17 COG3308 COG3308, Predicted membrane protein Function unknown 56479388 Common - hypothetical protein ebA6933 3 None None None 56477574 Common - hypothetical protein ebB122 14 None None None 56478741 Common - hypothetical protein ebA5821 45 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 56477477 Common rocD probable bifunctional arginase/ornithine aminotransferase ebA3609 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 56477488 Common - putative metallo-beta-lactamase family protein ebA3630 100 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56475856 Common - hypothetical protein ebA806 42 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 56478394 Common rpmE 50S ribosomal protein L31 ebA5215 207 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 56478376 Common - hypothetical protein ebA5176 27 COG4103 COG4103, Uncharacterized protein conserved in bacteria Function unknown 56476531 Common - hypothetical protein ebA1982 19 None None None 56478502 Common padH phenylglyoxylate:acceptor oxidoreductase ebA5400 240 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 56479513 Common - putative peptidase family M48 protein ebA7188 124 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 56477081 Common tpx probable thiol peroxidase ebA2918 93 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56477134 Common atpC F0F1 ATP synthase subunit epsilon ebA3008 181 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 56477911 Common rpoD RNA polymerase sigma factor RpoD ebA4365 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 56475708 Common - conserved hypothetical protein, predicted Lipocalin-related protein and Bos/Can/Equ allergen family ebA535 13 None None None 56475989 Common gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase ebA1052 163 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 56475667 Common istA transposase ebA452 60 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477384 Nonpathogen - hypothetical protein ebA3449 1 None None None 56477249 Nonpathogen - hypothetical protein ebB99 8 None None None 56475761 Common tnp15 transposase, is4 family ebA630 41 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476828 Common soj chromosome partitioning protein ebA2469 129 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56479383 Common topA type I topoisomerase ebA6922 44 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 56478817 Nonpathogen - hypothetical protein ebA5940 2 None None None 56476372 Common - ribonuclease II ebA1734 74 COG0557 VacB, Exoribonuclease R Transcription 56475867 Common - elongation factor G ebA825 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 56479365 Common - probable ABC transport protein, ATP-binding protein ebA6882 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 56475817 Nonpathogen - hypothetical protein ebA750 1 None None None 56477815 Common trpC indole-3-glycerol phosphate synthase ebA4201 218 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 56476856 Common - hypothetical protein ebB81 12 None None None 56475676 Common - cytochrome P450-type heme-thiolate monooxygenase,N-terminal fragment ebA475 18 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 56476568 Common - transcriptional regulator, GntR family ebA2047 130 COG1802 GntR, Transcriptional regulators Transcription 56479084 Common - probable zipA related protein, possibly involved in cell division ebA6382 40 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 56477872 Common - conserved hypothetical protein, possible esterase/lipase/thioesterase ebA4303 18 COG2267 PldB, Lysophospholipase Lipid metabolism 56476206 Common secF preprotein translocase subunit SecF ebA1418 210 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 56477440 Common paaD putative ring oxidation complex protein 3 ebA3551 55 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 56479531 Nonpathogen - hypothetical protein ebA7221 1 None None None 56476114 Common ndk nucleoside diphosphate kinase ebB37 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 56476380 Nonpathogen - hypothetical protein ebA1746 1 None None None 56478801 Nonpathogen - hypothetical protein ebA5912 2 None None None 56479446 Common - predicted polysaccharide deacetylase ebA7067 99 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 56476198 Common ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ebA1405 189 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 56475972 Common dinP DNA polymerase IV ebA1024 184 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 56476183 Common s5h salicylate hydroxylase ebA1378 71 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 56477085 Nonpathogen - hypothetical protein ebD69 1 None None None 56477845 Common - polysaccharide deacetylase ebA4258 107 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 56475767 Nonpathogen - hypothetical protein ebA640 10 COG0731 COG0731, Fe-S oxidoreductases Energy production and conversion 56475607 Common - hypothetical protein ebA329 39 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 56476676 Common pta bifunctional enoyl-CoA hydratase/phosphate acetyltransferase ebA2247 160 COG0280 Pta, Phosphotransacetylase Energy production and conversion 56475715 Common - putative hydrolase, alpha/beta hydrolase fold family ebA546 128 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56477615 Nonpathogen rpmJ 50S ribosomal protein L36 ebC9 1 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 56476089 Nonpathogen - hypothetical protein ebD34 3 None None None 56477576 Common - hypothetical protein ebA3798 9 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 56476569 Common - putative beta-oxoacyl-CoA thiolase ebA2049 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56475690 Common - predicted acetyltransferase ebA505 98 COG3153 COG3153, Predicted acetyltransferase General function prediction only 56476527 Common - hypothetical protein ebB57 14 None None None 56477773 Common - predicted endonuclease / exonuclease / phosphatase family protein ebA4126 63 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 56479220 Common traW hypothetical protein ebA6618 26 None None None 56478070 Common - hypothetical protein ebA4654 12 None None None 56476971 Common - heat shock protein, HSP20 family ebA2730 132 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 56476415 Nonpathogen - hypothetical protein ebA1811 1 None None None 56477209 Common - probable Mg(2+) chelatase family related protein ebA3157 187 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 56479508 Common aprE probable alkaline protease secretion protein ebA7180 111 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56476599 Common - hypothetical protein ebA2105 14 None None None 56479091 Common - response regulator ebA6392 209 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56477691 Common - hypothetical protein ebA3981 125 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 56478194 Common - conserved hypothetical protein, putative endonuclease / exonuclease / phosphatase ebA4857 16 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 56479114 Common - molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit ebA6426 183 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56476572 Nonpathogen - hypothetical protein, potential small subunit of hyantoinase/(de)carboxylase ebD51 1 None None None 56475880 Common proB gamma-glutamyl kinase ebA844 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 56476224 Common ftsQ cell division transmembrane protein ebB42 73 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 56476426 Nonpathogen - hypothetical protein ebA1827 1 None None None 56478664 Common - putative transporter ebA5677 136 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56478313 Common sodB superoxide dismutase (Fe) ebA5077 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 56478013 Common coxB cytochrome c oxidase, subunit II ebA4547 156 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 56478923 Common - hypothetical protein ebA6101 55 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56477979 Common rpmB 50S ribosomal protein L28 ebA4482 168 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 56479171 Nonpathogen - hypothetical protein ebA6532 1 None None None 56476029 Common xthA exodeoxyribonuclease III ebA1134 196 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 56476562 Nonpathogen - INTERPRO: probable Peptidase, eukaryotic cysteine peptidase active site ebA2032 1 None None None 56475825 Nonpathogen - hypothetical protein ebA762 1 None None None 56476121 Common - putative HTRA-like serine protease ebA1283 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 56476292 Common higB plasmid maintenance system killer protein ebA1560 58 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 56478168 Common dhpS dihydropteroate synthase ebA4824 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 56478302 Nonpathogen - hypothetical protein ebA5052 1 None None None 56477101 Common - hypothetical protein ebA2958 54 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 56476082 Common nirB assimilatory nitrite reductase, large subunit ebA1216 204 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 56476167 Common - hypothetical protein ebA1345 31 COG5519 COG5519, Superfamily II helicase and inactivated derivatives DNA replication, recombination, and repair 56478203 Nonpathogen - hypothetical protein ebA4867 1 None None None 56477093 Common fdhD formate dehydrogenase accessory protein ebA2944 135 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 56477954 Common lspA lipoprotein signal peptidase ebA4447 203 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56477536 Nonpathogen - hypothetical protein ebA3723 1 None None None 56477684 Common - hypothetical protein ebA3968 162 COG1576 COG1576, Uncharacterized conserved protein Function unknown 56477454 Common ribAB bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein ebA3567 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 56477702 Common waaG UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase ebA3996 120 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476263 Common - hypothetical protein ebA1512 17 COG2327 WcaK, Uncharacterized conserved protein Function unknown 56478088 Common - hypothetical protein ebA4694 19 COG5352 COG5352, Uncharacterized protein conserved in bacteria Function unknown 56479168 Common relA GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) ebA6528 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 56475799 Common - TetR-family transcriptional regulator ebA715 99 COG1309 AcrR, Transcriptional regulator Transcription 56477901 Common pilB type IV fimbrial biogenesis protein, pilB ebA4346 216 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 56478692 Common paaF enoyl-CoA hydratase ebA5732 185 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56478367 Common copA copper-transporting ATPase ebA5154 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 56476512 Nonpathogen - hypothetical protein, possibly transposase fragment ebD46 2 None None None 56476384 Common pilJ twitching motility transmembrane protein PilJ ebA1750 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 56477904 Common - hypothetical protein ebA4352 11 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 56478336 Nonpathogen pilV hypothetical protein ebA5107 2 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 56478355 Common - hypothetical protein ebA5136 28 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 56479451 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase ebA7075 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56479358 Common - hypothetical protein, putative FAD/FMN-containing dehydrogenase ebA6871 39 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56476041 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase ebA1153 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 56476494 Nonpathogen - hypothetical protein c2A229 1 None None None 56477253 Nonpathogen - hypothetical protein ebA3226 1 None None None 56476119 Nonpathogen - hypothetical protein ebA1278 4 None None None 56478780 Common wzx probably involved in the export of O-antigen (flippase Wzx) ebA5876 12 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 56477069 Common phbZ poly(3-hydroxybutyrate) depolymerase ebA2902 33 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 56475756 Common cytC5 di-Heme Cytochrome c ebA618 37 COG3258 COG3258, Cytochrome c Energy production and conversion 56479555 Common - phage portal protein, lambda family ebA7269 36 COG5511 COG5511, Bacteriophage capsid protein General function prediction only 56478771 Nonpathogen - hypothetical protein ebA5865 1 None None None 56475754 Common - hypothetical protein ebB16 6 None None None 56478027 Nonpathogen sdhD succinate dehydrogenase,hydrophobic membrane anchor protein ebA4576 1 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 56476240 Common gmhA phosphoheptose isomerase ebA1463 122 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 56478667 Common - transcriptional regulatory protein,MarR family ebA5682 72 COG1846 MarR, Transcriptional regulators Transcription 56475823 Common - hypothetical protein ebA759 4 None None None 56478847 Common VapC predicted nucleic acid-binding protein,contains PIN domain ebA5980 67 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56479130 Common rnhA ribonuclease HI ebA6458 177 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 56478462 Common - probable acyl-CoA dehydrogenase ebA5321 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56479343 Common minE cell division topological specificity factor protein minE ebA6839 84 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 56475956 Common trmU tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein ebA986 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 56476961 Common - putative metallo-beta-lactamase family protein ebA2717 220 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56476550 Common istB transposition helper protein ebA2009 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476739 Common - hypothetical protein, putative GTPase c1A57 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 56475929 Common - bacterial outer membrane protein ebA913 150 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56475784 Common - hypothetical protein ebA671 55 COG4637 COG4637, Predicted ATPase General function prediction only 56476187 Common ftsX cell division protein FtsX ebA1387 66 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 56479277 Common - hypothetical protein ebA6712 7 None None None 56479110 Nonpathogen - hypothetical protein ebA6420 2 None None None 56478341 Common tnp39 transposase ebA5114 64 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479302 Common - hypothetical protein ebA6753 81 COG2128 COG2128, Uncharacterized conserved protein Function unknown 56478877 Nonpathogen - hypothetical protein ebA6027 1 None None None 56479325 Common - hypothetical protein ebA6804 49 COG5621 COG5621, Predicted secreted hydrolase General function prediction only 56477123 Common - transcriptional regulator, lysR family ebA2995 131 COG0583 LysR, Transcriptional regulator Transcription 56479486 Common - two-component sensor histidine kinase ebA7143 208 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56479257 Common sucB dihydrolipoamide acetyltransferase ebA6684 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 56478148 Common cysS cysteinyl-tRNA synthetase ebA4792 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56478381 Common - ABC efflux transporter, permease/ATP-binding protein ebA5186 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 56476274 Common - mannosyltransferase ebA1527 162 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56477387 Common tnp32 transposase ebA3455 77 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477631 Common - conserved hypothetical protein, predicted Ferrochelatase family ebA3869 80 COG2138 COG2138, Uncharacterized conserved protein Function unknown 56479187 Common rhtB putative amino acid efflux protein ebA6561 116 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 56476142 Common vacJ probable lipoprotein precursor (VACJ) ebA1310 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 56477039 Common - hypothetical protein ebA2851 49 COG1944 COG1944, Uncharacterized conserved protein Function unknown 56477447 Common - amino-acid composite ATP-binding transmembrane ABC transporter protein ebA3560 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56478995 Common - hypothetical protein ebA6226 5 None None None 56476066 Common dadA D-amino acid dehydrogenase small subunit ebA1192 115 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 56478980 Nonpathogen - hypothetical protein ebB221 1 None None None 56477323 Nonpathogen - hypothetical protein ebA3343 1 None None None 56479351 Common gltX glutamyl-tRNA synthetase ebA6855 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 56479153 Common - PpiC-type peptidyl-prolyl cis-trans isomerase ebA6504 156 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56477263 Common - hypothetical protein ebA3244 111 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 56476271 Common - hypothetical protein ebA1520 157 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 56476480 Common - conserved hypothetical protein, predicted amidohydrolase family c2A204 97 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 56478787 Common - probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis ebA5887 23 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56476215 Nonpathogen - hypothetical protein ebA1429 1 None None None 56476369 Common upk putative undecaprenol kinase ebA1726 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 56476948 Nonpathogen - hypothetical protein ebA2688 1 None None None 56476754 Nonpathogen - hypothetical protein, putative cox2 cytochrome oxidase subunit 2 c1A87 8 None None None 56477758 Common mltA membrane-bound lytic murein transglycosylase A ebA4100 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 56478081 Common - conserved hypothetical protein, related to Nudix hydrolase ebA4673 72 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56476536 Common - putative C4-dicarboxylate transporter ebA1993 37 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 56478650 Common - conserved hypothetical protein, related to UbiD-type (de) carboxylyase ebA5649 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 56478160 Common dapB putative dihydrodipicolinate reductase ebA4812 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 56478478 Common - putative tungsten-containing aldehyde ferredoxin oxidoreductase (AOR-1) ebA5355 56 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 56476932 Common - ExsB protein ebA2659 177 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 56478176 Common nuoA NADH dehydrogenase I chain A ebD11 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 56478906 Common - hypothetical protein ebA6078 20 None None None 56478522 Common moaA molybdenum cofactor biosynthesis protein A ebA5430 200 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 56478868 Common bioD cobyrinic acid a,c-diamide synthase:dethiobiotin synthase ebA6011 175 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 56477764 Common - tryptophan synthase subunit beta ebA4109 224 COG1350 COG1350, Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) General function prediction only 56477319 Common tnpF11 putative transposase (IS4, fragment) ebA3336 29 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56476556 Nonpathogen - hypothetical protein ebA2018 1 None None None 56476651 Nonpathogen - hypothetical protein ebA2197 1 None None None 56477115 Common rdgC recombination associated protein ebA2982 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 56477273 Nonpathogen - hypothetical protein ebA3260 1 None None None 56478527 Common - conserved hypothetical protein, probable DNA/RNA helicase ebA5435 72 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 56475468 Common - predicted SAM-dependent methyltransferase ebA59 54 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 56475783 Common - probable methylation subunit, type III restriction-modification system ebA670 70 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 56475502 Common - two-component response regulator ebA125 223 COG4566 TtrR, Response regulator Signal transduction mechanisms 56478538 Common rpmF 50S ribosomal protein L32 ebC5 92 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 56476335 Common - hypothetical protein ebA1652 18 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 56476776 Common - hypothetical protein ebA2398 22 None None None 56476258 Nonpathogen - hypothetical protein ebA1495 1 None None None 56477350 Common - conserved hypothetical protein, predicted 5-formyltetrahydrofolate cyclo-ligase family ebA3386 49 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 56478748 Common pps phosphoenolpyruvate synthase ebA5830 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56478546 Common nadB L-aspartate oxidase ebA5461 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 56479237 Common - hypothetical protein ebA6654 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 56478215 Common rnfB electron transport complex protein RnfB ebA4884 127 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 56478686 Common paaC2 hypothetical protein ebA5722 42 COG3396 COG3396, Uncharacterized conserved protein Function unknown 56478853 Common pyrH uridylate kinase ebA5988 234 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 56475777 Common vapB virulence associated protein B ebD28 29 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 56475900 Common - hypothetical protein ebA875 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 56478556 Common - putative phage related protein ebA5482 7 None None None 56476997 Common - putative aminopeptidase ebA2774 116 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 56475735 Common - hypothetical protein ebA582 22 COG4564 COG4564, Signal transduction histidine kinase Signal transduction mechanisms 56477804 Nonpathogen - hypothetical protein ebA4183 1 None None None 56476073 Common - hypothetical protein ebA1202 191 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 56477288 Common - hypothetical protein ebA3288 19 None None None 56479182 Common - hypothetical protein ebA6551 76 COG2078 AMMECR1, Uncharacterized conserved protein Function unknown 56477154 Common - aminotransferase class-IV ebA3046 180 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 56476607 Nonpathogen - hypothetical protein ebA2119 1 None None None 56479123 Nonpathogen - hypothetical protein ebA6447 1 None None None 56479378 Common rfaG glycosyltransferase ebA6914 18 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56478157 Common ppnK putative inorganic polyphosphate/ATP-NAD kinase ebA4805 240 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 56478386 Common - cytochrome c family protein ebA5197 23 None None None 56478704 Common - conserved hypothetical protein, possibly involved in regulation of phenolics degradation ebA5757 29 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 56475768 Common - conserved hypothetical protein, predicted 6-pyruvoyl tetrahydrobiopterin synthase protein family ebA642 101 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 56477034 Common dnaA chromosomal replication iniciator protein DnaA ebA2846 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 56478617 Common - conserved hypothetical protein, similar to arsenate reductase subunit ArsC ebA5585 122 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 56476628 Common - conserved hypothetical protein, contains PAS domains ebA2147 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56475483 Nonpathogen - hypothetical protein ebA90 1 None None None 56476761 Common apc2 possible subunit of acetophenone carboxylase c1A200 13 COG4647 AcxC, Acetone carboxylase, gamma subunit Secondary metabolites biosynthesis, transport, and catabolism 56476120 Common - hypothetical protein ebA1284 122 COG0327 COG0327, Uncharacterized conserved protein Function unknown 56479042 Common - putative MFS permease ebA6311 59 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56479104 Common suhB inositol monophosphatase (Extragenic suppressor protein) ebA6410 212 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 56475966 Common - probable tetraheme cytochrome C-type precursor ebA1009 38 COG3005 TorC, Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit Energy production and conversion 56476954 Common mutY A/G-specific DNA glycosylase ebA2699 186 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 56479060 Nonpathogen - hypothetical protein ebA6341 1 None None None 56476045 Common nirE uroporphyrin-III C-methyltransferase ebA1162 46 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 56479075 Nonpathogen - hypothetical protein ebA6366 4 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 56476180 Common lysR transcriptional regulator, LysR family ebA1372 143 COG0583 LysR, Transcriptional regulator Transcription 56477185 Common - probable zinc-containing alcohol dehydrogenase ebA3118 213 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 56478602 Nonpathogen - hypothetical protein ebD95 1 None None None 56477451 Common rhlE1 ATP-dependent RNA helicase ebA3563 242 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 56478092 Common acxB acetone carboxylase alpha subunit ebA4701 86 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56479395 Common - conserved hypothetical protein, predicted Endonuclease / exonuclease / phosphatase family ebA6951 73 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 56475584 Common istA transposase ebA292 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476260 Common - hypothetical protein ebA1500 3 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 56477637 Common acpD acyl carrier protein phosphodiesterase ebA3879 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 56477938 Common - outer membrane lipoprotein containing OmpA/MotB domain ebA4407 158 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56478636 Common - enoyl-CoA hydratase ebA5619 154 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56479417 Common - putative alpha amylase/trehalose synthase ebA7001 175 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 56476160 Common - hypothetical protein ebA1335 218 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 56476579 Common - Large subunit of molybdenum enzyme ebA2064 111 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 56478767 Common - predicted ARSR subfamily of helix-turn-helix bacterial transcription regulatory protein ebA5860 14 None None None 56478404 Nonpathogen - hypothetical protein ebA5228 3 None None None 56477195 Common ppcA alpha subunit of phenylphosphate carboxylase ebA3138 153 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 56477438 Common paaB hypothetical protein ebA3548 38 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 56478968 Common - predicted kinase ebA6181 51 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 56479310 Nonpathogen - hypothetical protein ebA6771 1 None None None 56476509 Common tnp20 putative transposase, fragment ebA1948 54 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476003 Common moeA probable molybdopterin biosynthesis MOEA protein ebA1078 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 56476646 Common - putative pyruvate decarboxylase E1 (Beta subunit) oxidoreductase protein ebA2187 203 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 56477992 Common - predicted SAM-dependent methyltransferase ebA4504 46 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 56479558 Nonpathogen - hypothetical protein ebA7272 1 None None None 56478445 Common dch dienoyl-CoA hydratase ebA5296 174 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56476407 Common - hypothetical protein ebA1787 153 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 56476794 Common - hypothetical protein ebA2420 21 None None None 56477424 Common cycH putative Cyctochrome C biogenesis protein ebA3526 40 COG4235 COG4235, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 56475450 Common - hypothetical protein ebA36 106 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 56477577 Common - putative two-component response regulator ebA3801 195 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56479368 Common - two-component regulatory system protein containing hybrid kinase and response regulator domains ebA6890 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 56478316 Common exbB2 MotA/TolQ/ExbB proton channel family protein ebA5081 151 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 56477212 Common pchA P-hydroxybenzaldehyde dehydrogenase ebA3161 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56479299 Common - hypothetical protein ebA6750 20 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 56475992 Common secB preprotein translocase subunit SecB ebA1056 108 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 56476657 Nonpathogen - hypothetical protein ebA2210 1 None None None 56478722 Nonpathogen - hypothetical protein ebA5788 1 None None None 56479379 Common glgA putative glycogen synthase ebA6917 141 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 56477946 Common istA transposase ebA4437 133 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476698 Common ubiD predicted 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase ebA2286 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 56477839 Common wza putative polysaccharide export protein ebA4247 108 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 56475581 Common - hypothetical protein ebA284 101 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 56476900 Common hsdM Type I site-specific deoxyribonuclease, methylase subunit ebA2607 162 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 56475588 Nonpathogen pchC probable p-cresol methylhydroxylase subunit ebA299 2 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56477042 Common istA transposase ebA2853 133 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476886 Common rnfB electron transport complex protein RnfB ebA2576 126 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 56479471 Common folK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin ase ebA7113 195 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 56478024 Common - predicted carboxymuconolactone decarboxylase ebB153 74 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 56477210 Common - putative MFS transporter ebA3158 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56476060 Nonpathogen - hypothetical protein ebA1183 1 None None None 56477260 Common - hypothetical protein ebA3236 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 56478835 Common - putative phage-like regulator protein ebD107 24 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 56478433 Nonpathogen - hypothetical protein ebA5276 1 None None None 56475441 Nonpathogen - hypothetical protein ebA15 1 None None None 56476352 Common - hypothetical protein ebA1694 30 None None None 56476936 Common istA transposase ebA2667 69 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476790 Common - hypothetical protein ebA2415 91 COG0433 COG0433, Predicted ATPase General function prediction only 56477005 Common - putative ATP-binding ABC transporter protein ebA2792 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 56478702 Common - two-component response regulator ebA5752 214 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56477113 Common rsuA ribosomal small subunit pseudouridine synthase A protein ebA2976 180 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 56476191 Common - putative zinc protease ebA1395 161 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 56478067 Common - conserved hypothetical protein, potential phosphoribosyltransferase ebA4649 69 COG1926 COG1926, Predicted phosphoribosyltransferases General function prediction only 56476093 Common - general (Type II) secretion pathway (GSP) D protein ebA1239 140 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 56475711 Common norVW anaerobic nitric oxide reductase flavorubredoxin ebA539 238 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 56475934 Common argC N-acetyl-gamma-glutamyl-phosphate reductase ebA935 213 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 56477271 Nonpathogen - hypothetical protein ebA3258 1 None None None 56478129 Common leuD isopropylmalate isomerase small subunit ebA4758 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 56476202 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase ebA1413 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 56476344 Common - hypothetical protein ebA1675 14 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 56476080 Common narK nitrate transporter ebA1213 89 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 56477385 Common - putative protein of the plasmid stabilization system ebB110 12 COG3668 ParE, Plasmid stabilization system protein General function prediction only 56476007 Common - hypothetical protein ebA1086 184 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 56477499 Nonpathogen - hypothetical protein ebA3652 6 COG4769 COG4769, Predicted membrane protein Function unknown 56479204 Common istA probable transposase ebA6587 151 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477776 Common - probable short chain oxidoreductase ebA4131 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56476497 Common - probable transporter ebA1928 109 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 56477832 Common ctaA putative cytochrome aa3 oxidase assembly protein,related to CtaA ebA4236 53 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 56478460 Common - putative beta-ketothiolase ebA5319 167 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56476862 Nonpathogen - hypothetical protein ebA2526 1 None None None 56476176 Nonpathogen - hypothetical protein ebA1364 1 None None None 56478592 Common recO DNA repair protein RecO ebA5541 65 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 56477965 Common - putative glycerol-3-phosphate dehydrogenase ebA4463 154 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 56478799 Common - predicted nucleic acid-binding protein,contains PIN domain ebA5909 23 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56475534 Common - hypothetical protein ebA176 37 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 56477798 Common rpe ribulose-phosphate 3-epimerase ebA4173 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 56479504 Common - hypothetical protein ebA7173 105 COG0795 COG0795, Predicted permeases General function prediction only 56479101 Common iscR iron-sulphur cluster assembly transcription factor IscR ebA6404 174 COG1959 COG1959, Predicted transcriptional regulator Transcription 56476413 Common - ABC transporter, ATP-binding/permease ebA1807 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 56475720 Common phaF putative monovalent cation/H+ antiporter subunit F ebA554 67 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 56479056 Common - hypothetical protein ebA6336 27 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56479062 Common istA transposase ebA6343 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475648 Common - hypothetical protein ebA409 20 None None None 56475842 Common - hypothetical protein ebA784 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 56477367 Nonpathogen - hypothetical protein ebA3419 1 None None None 56477665 Common - predicted Fe-S oxidoreductase of unknown function ebA3931 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 56478182 Common nuoG NADH dehydrogenase subunit G ebA4841 193 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 56479425 Common - hypothetical protein ebA7025 16 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56479517 Common - predicted glycosyl transferase, related to UDP-glucuronosyltransferase ebA7196 38 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 56475568 Common hepA ATP-dependent helicase ebA251 132 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 56479463 Common - hypothetical protein ebA7099 5 None None None 56477975 Common clpS ATP-dependent Clp protease adaptor protein ClpS ebD83 122 COG2127 COG2127, Uncharacterized conserved protein Function unknown 56479562 Nonpathogen - hypothetical protein ebA7286 1 None None None 56476207 Common - hypothetical protein ebB41 15 COG4390 COG4390, Uncharacterized protein conserved in bacteria Function unknown 56476705 Common ubiC chorismate:pyruvate lyase, 4-hydroxybenzoate synthetase ebA2295 23 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 56477240 Nonpathogen - hypothetical protein ebA3200 1 None None None 56478242 Nonpathogen - hypothetical protein ebA4929 5 None None None 56478267 Common lon ATP-dependent protease La ebA4973 216 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 56479354 Common - hypothetical protein ebA6861 127 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56477161 Common ttrC subunit C of a molybdoprotein, similar to that of tetrathionate reductase or polysulphide reductase ebA3056 30 COG3301 NrfD, Formate-dependent nitrite reductase, membrane component Inorganic ion transport and metabolism 56475437 Nonpathogen - hypothetical protein ebA7 4 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 56478979 Common - hypothetical protein ebD111 94 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 56477376 Common - putative Sensory box histidine kinase/response regulator ebA3436 209 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56477484 Common ald alanine dehydrogenase ebA3623 161 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 56476025 Common - hypothetical protein ebA1124 41 COG4949 COG4949, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 56477217 Common livF Leucine/isoleucine/valine transport system ATP-binding protein ebA3167 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56478384 Common - conserved hypothetical protein, predicted Peptidase U32 family ebA5191 137 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 56479131 Common - generic methyl-transferase ebA6459 53 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56478307 Common - predicted Fe-S-cluster redox enzyme,radical SAM family ebA5068 193 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 56479370 Common - hypothetical protein ebD123 4 None None None 56476471 Common bssA alpha-Subunit of benzylsuccinate synthase c2A304 57 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 56477347 Common - putative glutathione S-transferase ebA3380 63 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56475898 Common thrS threonyl-tRNA synthetase ebA871 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56476586 Common - conserved hypothetical protein, possilbly involved in molybdenum cofactor biosynthesis ebA2082 10 None None None 56475969 Common - molybdenum enzyme of unknown function, large subunit ebA1017 181 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56475616 Common hns DNA-binding protein, similar to histone-like nucleoid-structuring protein H-NS ebA348 11 COG2916 Hns, DNA-binding protein H-NS General function prediction only 56477446 Common - putative branched-chain amino acid transport system protein ebA3559 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56477885 Common - hypothetical protein ebA4323 25 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 56478308 Common - hypothetical protein ebD85 13 None None None 56478971 Common - hypothetical protein ebA6186 10 None None None 56478554 Common - hypothetical protein ebA5480 2 None None None 56478962 Common - predicted carbonic anhydrase / acetyltransferase, isoleucine patch superfamily ebA6171 203 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 56477678 Nonpathogen - hypothetical protein ebA3957 1 None None None 56476141 Common - putative toluene tolerance protein ebA1308 83 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 56478986 Nonpathogen - hypothetical protein ebA6211 1 None None None 56476296 Common - conserved hypothetical protein, predicted acyltransferase 3 family family ebA1570 37 COG3274 COG3274, Uncharacterized protein conserved in bacteria Function unknown 56475495 Nonpathogen - hypothetical protein ebA108 1 None None None 56476722 Common fadA acetyl-CoA acetyltransferase c1A212 176 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56478612 Common - hypothetical protein ebA5573 64 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 56475836 Common - hypothetical protein ebA775 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 56477413 Common narX nitrate/nitrite TWO-component sensor NARX ebA3507 143 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 56479160 Common - enoyl-CoA hydratase ebA6516 178 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477341 Common - hypothetical protein ebA3370 87 COG1565 COG1565, Uncharacterized conserved protein Function unknown 56475434 Common - putative bacteriophage-related transcriptional repressor ebA2 60 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 56478907 Common - hypothetical protein ebD102 14 COG4115 COG4115, Uncharacterized protein conserved in bacteria Function unknown 56478265 Common clpP ATP-dependent Clp protease proteolytic subunit ebA4970 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56478348 Common - probable cation transport P-type ATPase ebA5128 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 56479247 Common phbP granule-associated protein (PHASIN) ebA6668 18 COG5490 COG5490, Uncharacterized conserved protein Function unknown 56478568 Nonpathogen - hypothetical protein ebA5500 1 None None None 56476151 Common ech enoyl-CoA hydratase ebA1321 186 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56476876 Common - hypothetical protein ebA2553 23 None None None 56478207 Common cytC1 cytochrome c, class IC ebA4872 52 COG2863 COG2863, Cytochrome c553 Energy production and conversion 56478705 Common - acetyl-CoA synthetase ebA5760 202 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56479113 Nonpathogen - hypothetical protein ebA6425 7 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 56476419 Common - hypothetical protein ebA1815 101 COG1262 COG1262, Uncharacterized conserved protein Function unknown 56476972 Common - putative heat shock protein ebB88 131 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 56475594 Common chnA cyclohexanol dehydrogenase ebA307 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56477453 Common ribH riboflavin synthase subunit beta ebA3566 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 56477740 Common - putative ABC transporter protein ebA4058 172 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 56476034 Common surA PpiC-type peptidyl-prolyl cis-trans isomerase ebA1140 161 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56478238 Common - hypothetical protein ebA4923 10 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 56478585 Nonpathogen - hypothetical protein, INTERPRO suggestion: Beta tubulin or Prophage regulatory protein ebA5533 1 COG3311 AlpA, Predicted transcriptional regulator Transcription 56479449 Common - hypothetical protein ebA7073 20 None None None 56477732 Common pbp probable D-alanyl-D-alanine carboxypeptidase ebA4047 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 56479314 Common istA transposase ebA6779 151 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478917 Common - hypothetical protein ebA6094 36 None None None 56479020 Common nosY probable transmembrane protein ebA6266 34 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 56477718 Common cobO cob(I)yrinic acid a,c-diamide adenosyltransferase ebA4023 141 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 56479172 Common - hypothetical protein ebA6533 21 COG5622 COG5622, Protein required for attachment to host cells Cell motility and secretion 56479011 Common - ABC transporter, ATP-binding protein of putative efflux system ebA6253 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 56476765 Nonpathogen tnpF9 transposase, fragmentary gene ebA2386 3 None None None 56476812 Nonpathogen - hypothetical protein ebA2446 1 None None None 56479086 Common dapC hypothetical protein ebA6385 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56479269 Common infA translation initiation factor IF-1 ebD115 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 56477267 Common amiC potential peptidoglycan amidase, C-terminal fragment ebA3253 9 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 56477402 Common creA CreA protein ebA3483 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 56477891 Common - small heat shock protein ebA4332 164 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 56475695 Common - hypothetical protein ebA514 2 None None None 56478697 Common hutU urocanate hydratase ebA5741 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 56477340 Common - pteridine reductase ebA3368 228 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56478744 Common - hypothetical protein ebA5826 24 COG3821 COG3821, Predicted membrane protein Function unknown 56477785 Common tlyC CBS domain protein ebA4147 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 56475745 Common - glycosyl transferase, group 2 family ebA600 184 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56475849 Nonpathogen - hypothetical protein ebA796 1 None None None 56475790 Common tnp16B transposase ebB18 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479140 Common - sensory transduction histidine kinase ebA6478 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56477635 Common dsbB putative Disulfide bond formation protein B 1 (Disulfide oxidoreductase 1) ebA3876 61 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 56478479 Common ompC outer membrane protein (porin) ebA5358 22 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 56478181 Common nuoF NADH dehydrogenase I, chain F ebA4840 159 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 56475457 Nonpathogen - hypothetical protein ebA46 1 None None None 56478899 Nonpathogen - hypothetical protein ebA6070 1 None None None 56479236 Common smpB SsrA-binding protein ebB233 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 56479524 Nonpathogen - hypothetical protein ebA7210 3 None None None 56476542 Common - GCN5-related N-acetyltransferase ebA2001 45 None None None 56478008 Common cycA di-heme cytochrome c (class I), probably related to cytochrome c oxidase function ebA4537 33 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56476096 Common - hypothetical protein ebA1245 11 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56477605 Common rplX 50S ribosomal protein L24 ebB128 212 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 56479184 Common mfd transcription-repair coupling protein Mfd ebA6555 234 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 56478623 Common - hypothetical protein ebA5598 16 None None None 56476805 Common - hypothetical protein ebA2434 11 None None None 56475652 Common - hypothetical protein ebA416 27 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 56477297 Common - potential fumarylacetoacetate hydrolase (extradiol catechol pathway) ebA3300 81 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 56478485 Common - hybrid sensor component of two-component regulation system ebA5371 222 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56479306 Common istA transposase ebA6763 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478188 Common nuoM NADH dehydrogenase subunit M ebA4847 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 56478575 Nonpathogen - hypothetical protein ebA5510 1 None None None 56476772 Common - hypothetical protein ebA2394 11 None None None 56477868 Common lysA ornithine/diaminopimelate/arginine decarboxylase,family 2 ebA4296 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 56479345 Common lysU Lysyl-tRNA synthetase (class II) ebA6841 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 56476504 Common - hypothetical protein ebA1941 38 None None None 56476282 Common istA transposase ebA1544 60 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478772 Common - hypothetical protein ebD97 22 COG3177 COG3177, Uncharacterized conserved protein Function unknown 56476528 Common dps DNA-binding ferritin-like protein (oxidative damage protectant) ebA1978 138 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 56476236 Nonpathogen - hypothetical protein ebA1454 1 None None None 56477330 Common stbB plasmid stability protein ebA3350 52 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56479169 Common - hypothetical protein ebA6529 157 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 56476189 Common ftsY cell division protein FtsY ebA1393 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 56478410 Common - hypothetical protein ebB184 3 None None None 56477739 Nonpathogen - hypothetical protein ebD79 1 None None None 56475905 Common nirD NIRD ebA881 51 COG1522 Lrp, Transcriptional regulators Transcription 56475921 Common ihfB integration host factor beta-subunit ebA902 203 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 56475730 Common tnp12 transposase, is4 family ebA569 65 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478284 Common TM0395 hypothetical protein ebA5007 238 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 56475962 Common - putative phosphoglucomutase ebA996 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 56478503 Common padI phenylglyoxylate:acceptor oxidoreductase ebA5401 168 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 56476597 Common katA catalase ebA2102 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 56477855 Nonpathogen - hypothetical protein ebA4271 4 None None None 56475855 Common - putative helicase ebA803 139 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 56476140 Common - predicted NTP binding protein (contains STAS domain) ebA1307 5 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 56477933 Common ahpC predicted peroxiredoxin ebA4399 225 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56477490 Nonpathogen - hypothetical protein ebA3635 1 None None None 56475702 Nonpathogen - hypothetical protein ebA522 1 None None None 56475806 Common DctM C4-dicarboxylate uptake permease ebA732 129 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 56479108 Nonpathogen - hypothetical protein ebA6416 2 None None None 56478450 Common - putative ABC transporter subunit ebA5303 133 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56478625 Nonpathogen - hypothetical protein ebA5602 1 None None None 56478777 Common - conserved hypothetical protein, putative regulator ebD15 38 COG3636 COG3636, Predicted transcriptional regulator Transcription 56476624 Common - hypothetical protein ebA2139 32 COG5637 COG5637, Predicted integral membrane protein Function unknown 56478312 Common gst putative gluthione S-transferase ebA5076 95 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56478756 Common rbfA ribosome-binding factor A ebA5842 188 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 56479029 Common narI nitrate reductase, gamma subunit ebA6282 62 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 56477830 Common - SURF1 family protein ebA4233 69 COG3346 COG3346, Uncharacterized conserved protein Function unknown 56477994 Common ugpQ cytoplasmic glycerophosphodiester phosphodiesterase ebA4509 133 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 56475810 Nonpathogen - hypothetical protein ebA739 1 None None None 56478925 Common - sensory protein with histidine kinase domain ebA6104 187 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 56476782 Common - hypothetical protein ebA2408 21 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 56479033 Common narK2 nitrate/nitrite antiporter ebA6288 77 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 56478296 Nonpathogen - hypothetical protein, INTERPRO prediction: probable phasin ebA5033 2 None None None 56477241 Nonpathogen - hypothetical protein, similar to DnrO from P. stutzeri ebA3201 8 None None None 56477653 Nonpathogen - hypothetical protein ebA3903 1 None None None 56478860 Common - putative outer membrane protein ebA5997 84 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 56477046 Nonpathogen - hypothetical protein ebA2860 1 None None None 56478084 Nonpathogen - hypothetical protein, INTERPRO suggestion: probable Carbohydrate kinase ebA4680 1 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 56478228 Common gspI2 general secretion pathway protein I ebA4908 41 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56478934 Common gcvH glycine cleavage system H protein ebB217 185 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 56478112 Common phbR predicted Polyhydroxyalkanoate synthesis repressor PhaR ebA4732 65 COG5394 COG5394, Uncharacterized protein conserved in bacteria Function unknown 56477726 Nonpathogen - hypothetical protein ebA4036 1 None None None 56476358 Common - hypothetical protein ebA1709 64 COG2119 COG2119, Predicted membrane protein Function unknown 56475513 Common - hypothetical protein ebA145 115 COG2135 COG2135, Uncharacterized conserved protein Function unknown 56479262 Common sdhA succinate dehydrogenase, flavoprotein subunit ebA6690 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 56476988 Common boxZ aldehyde dehydrogenase ebA2759 198 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56478826 Nonpathogen - hypothetical protein ebD104 1 None None None 56476184 Common nagL maleylpyruvate isomerase ebA1379 96 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56476021 Nonpathogen - hypothetical protein ebA1115 1 None None None 56476907 Common cysB transcriptional regulator CysB-like protein ebA2615 192 COG0583 LysR, Transcriptional regulator Transcription 56477862 Common - amidotransferase, similar to asparagine synthase ebA4285 148 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 56476580 Common - putative CoA-transferase protein, (family III) ebA2066 106 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56478030 Common tnp36 transposase ebA4582 57 None None None 56477097 Common - Sigma-54 dependent response regulator ebA2951 206 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56476575 Common SbmB methylmalonyl-CoA mutase, C-terminal domain/subunit (Cobalamin-binding) ebD52 118 COG2185 Sbm, Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) Lipid metabolism 56477558 Common - putative adenosyl-cobalamine enzyme similar to methylmalonyl-CoA mutase or isobutyryl-CoA mutase ebA3766 110 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 56477625 Common - putative MFS family transporter ebA3858 217 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56477430 Common - hypothetical protein ebA3539 35 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 56477001 Nonpathogen - hypothetical protein ebA2787 2 None None None 56478421 Common - putative KTN NAD-binding domain involved with K+ transport precursor ebA5259 59 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 56476377 Common hemL glutamate-1-semialdehyde 2,1-aminomutase ebA1743 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 56478325 Common - hypothetical protein ebB178 19 None None None 56479292 Common - conserved hypothetical protein, predicted secretion protein HlyD family ebA6743 99 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56478593 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ ebA5544 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 56475507 Common lpd pyruvate dehydrogenase multienzyme complex,Dihydrolipoamide dehydrogenase component ebA136 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 56476928 Common tolB translocation protein TolB ebA2650 167 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 56477396 Common - molecular chaperone, Hsp70 class ebA3469 233 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56477926 Common uvrD ATP-dependent DNA helicase ebA4390 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 56476478 Common - hypothetical protein c2A200 7 None None None 56477987 Common pntAA pyridine nucleotide transhydrogenase alpha subunit ebA4497 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 56479156 Common etfA electron transfer flavoprotein alpha subunit ebA6510 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 56477028 Common - transcriptional regulator, Sir2 family ebA2840 143 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 56477142 Common - HIT family hydrolase ebA3025 77 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 56476255 Nonpathogen - hypothetical protein ebA1490 1 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 56478035 Common korB 2-oxoglutarate ferredoxin oxidoreductase subunit beta ebA4589 109 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 56478330 Common - hypothetical protein ebD87 13 None None None 56477560 Common - hypothetical protein ebB120 24 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 56476832 Common - hypothetical protein ebA2472 10 None None None 56478134 Common truA tRNA pseudouridine synthase A ebA4770 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 56479040 Common metY O-acetylhomoserine sulfhydrylase, gene: metY ebA6307 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 56476617 Nonpathogen - hypothetical protein ebA2131 1 None None None 56477597 Common rplB 50S ribosomal protein L2 ebA3831 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 56478158 Common recN DNA repair protein RecN ebA4808 201 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 56477613 Common rplO 50S ribosomal protein L15 ebB131 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 56478914 Nonpathogen - hypothetical protein ebA6091 1 COG2433 COG2433, Uncharacterized conserved protein Function unknown 56476623 Common cobD cobalamin biosynthesis protein ebA2136 144 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 56476841 Common - hypothetical protein ebA2491 27 COG1476 COG1476, Predicted transcriptional regulators Transcription 56476462 Common - 3-hydroxybutyryl-CoA dehydrogenase c2A173 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56475811 Common - predicted acetyltransferase ebA741 12 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 56478206 Common - predicted ATPase of the AAA family ebA4871 99 COG0714 COG0714, MoxR-like ATPases General function prediction only 56478924 Common - putative ABC transporter ATP-binding protein ebA6102 248 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 56476945 Common - putative helicase ebA2682 116 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 56475514 Common - hypothetical protein ebD26 44 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 56475886 Common istB probable transpoase helper protein ebB23 48 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476922 Common - ATP-dependent protease peptidase subunit ebA2638 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 56478338 Common - hypothetical protein ebA5111 3 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 56478145 Common ppiB peptidyl-prolyl cis-trans isomerase B ebA4788 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 56476541 Common - hypothetical protein ebB58 27 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 56477275 Nonpathogen - hypothetical protein ebA3267 1 None None None 56476425 Nonpathogen - hypothetical protein ebA1826 1 None None None 56478680 Common - putative esterase/lipase/thioesterase ebA5712 100 COG0627 COG0627, Predicted esterase General function prediction only 56475778 Common - hypothetical protein ebB17 65 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56477194 Nonpathogen ppcD phenylphosphate carboxylase, delta subunit ebD5 1 None None None 56478618 Common - hypothetical protein, similar to domain in PEP synthetase ebA5586 5 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56477235 Common - hypothetical protein ebA3195 15 COG5591 COG5591, Uncharacterized conserved protein Function unknown 56478151 Common dnaK chaperone protein dnaK ebA4794 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56477584 Common rplA 50S ribosomal protein L1 ebA3814 243 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 56475791 Nonpathogen - hypothetical protein, potential fragment of transposase ebD29 1 None None None 56476635 Common - hypothetical protein ebA2165 22 COG5569 COG5569, Uncharacterized conserved protein Function unknown 56475928 Common - N-ethylammeline chlorohydrolase ebA911 176 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 56479296 Common - putative cytoplasmic molybdenum cofactor oxidoreductase ebA6747 176 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56476953 Nonpathogen - hypothetical protein ebA2697 1 None None None 56478091 Common acxA acetone carboxylase beta subunit ebA4700 100 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56479396 Common - hypothetical protein ebA6952 11 None None None 56475486 Common - hypothetical protein ebA95 2 None None None 56477157 Common lipA lipoyl synthase ebA3050 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 56477757 Common dsbC putative thiol:disulphide interchange protein (Periplasmic) ebA4099 69 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 56476076 Common acsA putative acetyl-coenzyme A synthetase ebA1206 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56477721 Nonpathogen - hypothetical protein ebA4026 2 None None None 56477102 Common smf SMF protein, Rossmann fold nucleotide-binding protein involved in DNA uptake ebA2961 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 56476520 Common ompC outer membrane protein (porin), similar to outer membrane porin protein 32 precursor (OMP32) ebA1962 29 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 56478613 Common - predicted glycosyltransferase ebA5576 203 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476019 Common - conserved hypothetical protein, predicted glycosyl transferase family 2 ebA1112 114 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56476546 Common - hypothetical protein ebB61 14 None None None 56475753 Common - predicted ferritin/ribonucleotide reductase-like protein ebA614 8 None None None 56475579 Common tnp6 transposase, IS5 family ebA279 47 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56478669 Common - acetolactate synthase catalytic subunit ebA5686 193 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 56478761 Common int phage-related integrase ebA5849 27 None None None 56476464 Common - transcriptional regulator c2A175 109 COG1414 IclR, Transcriptional regulator Transcription 56478670 Nonpathogen - hypothetical protein ebA5688 4 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 56477184 Common - hypothetical protein ebA3117 9 None None None 56475440 Common - hypothetical protein ebA11 5 COG5532 COG5532, Uncharacterized conserved protein Function unknown 56475732 Nonpathogen tnp13 transposase, is4 family ebA573 3 None None None 56479315 Common tnpF19 probable transposase (fragment) ebB236 40 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476408 Common - putative glycosyl transferase ebA1793 27 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56478818 Common - hypothetical protein ebA5941 9 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476131 Common hisB imidazoleglycerol-phosphate dehydratase ebA1296 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 56475523 Nonpathogen - hypothetical protein ebA161 1 None None None 56479453 Nonpathogen - hypothetical protein ebA7077 1 None None None 56477452 Common nusB N utilization substance protein B,transcription termination factor ebA3564 161 COG0781 NusB, Transcription termination factor Transcription 56477917 Common folB dihydroneopterin aldolase ebA4374 78 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 56475785 Common - hypothetical protein ebA672 21 None None None 56476483 Common bbsG benzylsuccinyl-CoA dehydrogenase c2A310 151 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56476960 Common mscL Large conductance mechanosensitive channel protein ebA2712 140 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56475469 Common def peptide deformylase ebA62 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 56476996 Nonpathogen - hypothetical protein ebA2773 1 None None None 56476049 Common - putative two-component system, regulatory protein ebA1169 210 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 56479094 Common fdx 2Fe-2S ferredoxin involved in the assembly of Fe-S clusters ebB229 94 COG0633 Fdx, Ferredoxin Energy production and conversion 56475977 Common - putative exported solute binding protein ebA1032 92 COG4663 FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 56477634 Common - hypothetical protein ebA3874 38 None None None 56477426 Common dadX alanine racemase ebA3534 199 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 56477747 Common - conserved hypothetical protein, probable flavoprotein ebA4068 72 COG2081 COG2081, Predicted flavoproteins General function prediction only 56478784 Common - predicted glycosyl transferase ebA5881 219 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56475571 Common - hypothetical protein ebA264 5 None None None 56479002 Common - hypothetical protein ebA6236 19 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 56475624 Common - phosphodiesterase/alkaline phosphatase D ebA362 46 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 56477793 Common dctM C4-dicarboxylate transport system permease, large subunit ebA4162 125 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 56479334 Common ybbB tRNA 2-selenouridine synthase ebA6818 65 COG2603 COG2603, Predicted ATPase General function prediction only 56476530 Common - DnaK-related protein ebA1980 20 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56478520 Common - hypothetical protein ebA5428 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 56476186 Common - putative MFS permease ebA1383 69 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 161350050 Common secD preprotein translocase subunit SecD ebA1417 211 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 56476915 Common - probable dioxygenase related to 2-nitropropane dioxygenase ebA2630 88 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 56477270 Nonpathogen - hypothetical protein ebA3256 1 None None None 56479000 Common - sensor histidine kinase ebA6233 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56479252 Common - hypothetical protein ebA6677 18 None None None 56478147 Nonpathogen - hypothetical protein ebA4791 1 None None None 56478175 Common secG preprotein translocase subunit SecG ebC15 12 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 56476359 Common thiD putative phosphomethylpyrimidine kinase ebA1711 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 56477337 Nonpathogen - hypothetical protein ebA3360 1 None None None 56477409 Common - hypothetical protein ebA3498 6 None None None 56478459 Common - enoyl-CoA hydratase ebA5318 174 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477616 Common rpsM 30S ribosomal protein S13 ebB132 241 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 56479055 Common - hypothetical protein ebA6332 45 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 56478856 Common cdsA phosphatidate cytidylyltransferase ebA5992 214 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 56478002 Common flgL flagellin and related hook-associated protein ebA4527 118 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 56476675 Common GLMU probable UDP-N-acetylglucosamine pyrophosphorylase protein ebA2245 227 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 56477899 Common pilD type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD ebA4343 139 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56476394 Common - hypothetical protein ebA1768 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 56477200 Common ppsA hypothetical protein ebA3144 174 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56478541 Common fabD acyl-carrier-protein S-malonyltransferase ebA5456 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 56475986 Nonpathogen - hypothetical protein ebA1048 3 None None None 56476753 Common - hypothetical protein, putative methyltransferase c1A84 34 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56477765 Common - pantothenate kinase ebA4111 131 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 56479501 Common trmD tRNA (Guanine-N(1)-)-methyltransferase ebA7168 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 56478342 Common - two-component system sensor protein ebA5117 101 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 56478802 Common - hypothetical protein ebA5913 5 None None None 56478301 Common - putative toluene tolerance protein ebA5051 89 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 56476553 Common - hypothetical protein ebD48 13 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 56476780 Common - hypothetical protein ebA2406 24 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 56475545 Common - hypothetical protein ebA192 122 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 56477056 Common - hypothetical protein ebA2875 96 COG0393 COG0393, Uncharacterized conserved protein Function unknown 56479192 Common - predicted transcription regulator containing helix turn helix domain ebA6572 33 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 56477391 Nonpathogen - hypothetical protein ebB112 2 None None None 56478202 Common - chloride channel protein ebA4866 132 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 56477160 Common ttrB subunit B of a molybdenum enzyme, similar to that of tetrathionate reductase (TTRB) ebA3055 159 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 56476166 Nonpathogen - hypothetical protein ebA1344 1 None None None 56479346 Common mnmC 5-methylaminomethyl-2-thiouridine methyltransferase ebA6842 113 COG4121 COG4121, Uncharacterized conserved protein Function unknown 56478103 Common algA putative mannose-1-phosphate guanylyltransferase ebA4723 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 56476277 Common xanB xanthan biosynthesis protein xanB fragment [Includes: Mannose-6-phosphate isomerase (Phosphomannose isomerase) (PMI) (Phosphohexomutase); Mannose-1-phosphate guanylyl transferase (GDP) (GDP-mannose pyrophosphorylase) ebA1533 122 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 56476565 Common - hypothetical protein ebD50 4 None None None 56479128 Common - hypothetical protein ebA6454 103 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 56479442 Common - conserved hypothetical protein, potential CoA ligase (AMP forming) ebA7059 96 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476383 Common pilI twitching motility protein PilI ebA1749 16 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 56475681 Common - conserved hypothetical protein, predicted carboxymuconolactone decarboxylase family ebA486 71 COG2128 COG2128, Uncharacterized conserved protein Function unknown 56476869 Nonpathogen - hypothetical protein ebA2538 1 None None None 56476416 Common - ABC transporter ATP-binding protein ebA1812 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 56475561 Common aroD 3-dehydroquinate dehydratase ebA234 55 COG0710 AroD, 3-dehydroquinate dehydratase Amino acid transport and metabolism 56476664 Common - ABC transporter, transmembrane region ebA2229 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 56477974 Common clpA probable ATP-dependent protease ebA4477 222 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 56479544 Common - hypothetical protein ebB249 10 None None None 56475769 Common - fatty acid desaturase, type 2 ebA644 66 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 56476819 Common topB1 DNA topoisomerase III ebA2458 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 56478685 Common paaB2 hypothetical protein ebA5721 37 COG3460 COG3460, Uncharacterized enzyme of phenylacetate metabolism Secondary metabolites biosynthesis, transport, and catabolism 56476715 Common parE plasmid stabilization system protein ebB67 14 COG3668 ParE, Plasmid stabilization system protein General function prediction only 56477158 Nonpathogen - hypothetical protein ebA3051 1 None None None 56479018 Common - hypothetical protein ebD113 4 None None None 56476977 Common trkG Trk-type K+ transport system, membrane component ebA2741 89 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 56477902 Common - transmembrane protein ebA4348 85 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 56478405 Common - putative ABC-type transporter ebA5230 6 COG4694 COG4694, Uncharacterized protein conserved in bacteria Function unknown 56476297 Common - SAPC family protein ebA1573 25 None None None 56478703 Common poxR positive regulator of phenol-degradative genes ebA5755 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 56477601 Common rplP 50S ribosomal protein L16 ebA3834 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 56476736 Common - hypothetical protein ebB68 14 COG1476 COG1476, Predicted transcriptional regulators Transcription 56477679 Common ruvB Holliday junction DNA helicase B ebA3958 218 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 56476470 Nonpathogen bssC gamma-Subunit of benzylsuccinate synthase c2A303 2 None None None 56477689 Common thrB homoserine kinase ebA3979 59 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 56477090 Common - putative iron-sulfur binding protein ebA2940 75 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 56478553 Common - hypothetical protein ebA5472 10 None None None 56475891 Common - putative MerR-family transcriptional regulator ebB24 88 COG0789 SoxR, Predicted transcriptional regulators Transcription 56478193 Common - putative cation efflux protein ebA4853 204 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 56476513 Common - acyl-CoA dehydrogenase ebA1953 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56477183 Common - hypothetical protein ebA3114 18 None None None 56478814 Nonpathogen - hypothetical protein ebA5934 1 None None None 56478167 Common hflB cell division protein ebA4823 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 56476264 Nonpathogen - hypothetical protein ebA1513 1 None None None 56477659 Common - putative iron-sulfur binding protein ebA3917 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 56477823 Common - probable cytidylyltransferase ebB144 135 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 56479527 Common moeB hypothetical protein ebA7215 49 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 56478738 Common - hypothetical protein ebA5817 46 COG4255 COG4255, Uncharacterized protein conserved in bacteria Function unknown 56475604 Common - putative sigma-54 dependent transcriptional regulator ebA324 168 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 56478317 Common exbD2 biopolymer transport protein ExbD/TolR ebB176 46 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 56477425 Common - hypothetical protein ebA3532 15 COG4309 COG4309, Uncharacterized conserved protein Function unknown 56478992 Nonpathogen - hypothetical protein ebA6221 1 None None None 56478866 Common - predicted integral membrane protein ebA6005 20 COG5615 COG5615, Predicted integral membrane protein Function unknown 56478246 Common revT1 reverse transcriptase/maturase ebA4939 90 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 56476457 Common metF 5,10-methylenetetrahydrofolate reductase oxidoreductase ebA1875 148 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 56479221 Common traU hypothetical protein ebA6622 26 None None None 56478337 Common - hypothetical protein ebA5109 3 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 56475675 Common tnp8 transposase, is200-like ebA474 68 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477252 Common - hypothetical protein ebA3225 7 None None None 56478693 Common - hypothetical protein ebA5735 25 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 56477877 Nonpathogen - hypothetical protein ebA4310 1 None None None 56479083 Common lig NAD-dependent DNA ligase ebA6380 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 56475953 Common - hypothetical protein ebA978 61 COG3025 COG3025, Uncharacterized conserved protein Function unknown 56477082 Common - hypothetical protein ebA2921 25 COG4254 COG4254, Uncharacterized protein conserved in bacteria Function unknown 56476683 Common pilQ fimbrial type-IV assembly protein PilQ ebA2259 142 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 56477316 Common - hypothetical protein ebB103 53 COG4115 COG4115, Uncharacterized protein conserved in bacteria Function unknown 56477837 Common ompC outer membrane protein (porin) ebA4244 27 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 56477907 Common gloA Lactoylglutathione lyase ebB148 128 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 56475982 Common glyA serine hydroxymethyltransferase 1 ebA1042 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 56476451 Common - high-affinity iron permease ebA1866 38 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 56476400 Common ascD CDP-6-deoxy-delta-3,4-glucoseen reductase ebA1776 152 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 56476913 Nonpathogen - hypothetical protein ebD65 1 None None None 56478848 Common glnD PII uridylyl-transferase ebA5982 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 56478326 Nonpathogen - hypothetical protein ebA5094 1 None None None 56475866 Common - hypothetical protein ebA826 13 None None None 56477626 Common ssb single-strand binding protein (SSB) (Helix-destabilizing protein) ebA3859 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 56478395 Common - hypothetical protein ebA5218 36 COG2378 COG2378, Predicted transcriptional regulator Transcription 56477138 Common - hypothetical protein ebB94 53 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 56478260 Common - hypothetical protein ebA4963 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 56476199 Common - phosphoribosyl transferase ebA1406 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 56477311 Common - hypothetical protein ebA3326 9 None None None 56477945 Common istB transposition helper protein ebA4436 16 None None None 56475660 Common - hypothetical protein ebA432 21 None None None 56476686 Common pilN type IV fimbrial biogenesis protein PilN ebA2265 46 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 56479211 Common traE plasmid-like conjugative transfer protein TraE ebA6600 18 None None None 56479324 Common capC capsular polysaccharide biosynthesis protein ebA6802 40 COG4464 CapC, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 56477818 Common fkpA putative FKBP-type peptidyl-prolyl cis-trans isomerase ebA4212 156 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 56477515 Common - probable substrate-binding periplasmic (PBP) ABC transporter protein ebA3688 138 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 56479301 Common - conserved hypothetical protein, predicted carboxymuconolactone decarboxylase family ebA6752 72 COG2128 COG2128, Uncharacterized conserved protein Function unknown 56479278 Common - hypothetical protein ebA6713 10 COG4801 COG4801, Predicted acyltransferase General function prediction only 56477133 Common atpD F0F1 ATP synthase subunit beta ebA3007 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 56478511 Common - putative glycine cleavage T-protein (Aminomethyl transferase) ebA5412 107 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 56477799 Common cbbZ putative phosphoglycolate phosphatase ebA4174 192 COG0546 Gph, Predicted phosphatases General function prediction only 56478983 Common cysW membrane component of thiosulfate ABC transporter ebA6207 225 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 56478954 Common - conserved hypothetical protein, predicted isochorismatase hydrolase family ebB219 58 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 56479497 Common - hypothetical protein ebA7158 94 COG1295 Rbn, Predicted membrane protein Function unknown 56477929 Common - putative phospholipase ebA4393 52 COG2829 PldA, Outer membrane phospholipase A Cell envelope biogenesis, outer membrane 56475762 Nonpathogen - hypothetical protein ebA631 1 None None None 56478021 Common gltK putative ABC transporter protein, probable glutamate/aspartate transmembrane subunit ebA4562 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 56479259 Common gltA citrate synthase ebA6687 194 COG0372 GltA, Citrate synthase Energy production and conversion 56478385 Common ftsH cell division protein ftsH homolog ebA5193 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 56477086 Common fdhB formate dehydrogenase iron-sulfur subunit ebA2935 162 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 56477386 Nonpathogen - hypothetical protein ebA3452 1 None None None 56475535 Nonpathogen - hypothetical protein ebA177 6 None None None 56477809 Common hyfD formate hydrogenlyase membrane subunit subunit HyfD ebA4192 64 COG0650 HyfC, Formate hydrogenlyase subunit 4 Energy production and conversion 56477766 Common birA probable biotin--acetyl-CoA-carboxylase ligase ebA4113 227 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 56479470 Common pcnB RNA-poly(A) polymerase ebA7112 211 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 56477592 Common tuf elongation factor Tu ebA3826 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 56476129 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase ebA1293 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 56476310 Nonpathogen - hypothetical protein ebA1607 1 None None None 56476720 Common - acyl-CoA thioesterase c1A206 135 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 56478428 Common - putative transmembrane transport protein ebD89 8 None None None 56478829 Common - hypothetical protein ebB207 34 COG2361 COG2361, Uncharacterized conserved protein Function unknown 56476825 Common - hypothetical protein ebA2466 23 None None None 56478528 Common tyrB aromatic amino acid aminotransferase ebA5437 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56479492 Common - putative flavocytochrome subuit of an oxidoreductase ebA7152 81 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 56476216 Common int phage-related integrase ebA1430 102 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56476102 Common hflC putative membrane-bound regulator HflC ebA1252 206 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 56476072 Common recR recombination protein RecR ebA1200 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 56476309 Common gspD general (Type II) secretion pathway (GSP) D protein ebA1602 142 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 56477696 Nonpathogen - hypothetical protein ebA3987 1 None None None 56477600 Common rpsC 30S ribosomal protein S3 ebA3833 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 56477149 Common mreD probable ROD shape-determining MRED transmembrane protein ebA3038 45 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 56475566 Nonpathogen - hypothetical protein ebA249 1 None None None 56475841 Common surE stationary phase survival protein SurE ebA782 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 56476704 Common ubiA 4-hydroxybenzoate octaprenyltransferase ebA2294 172 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 56477648 Common - hypothetical protein ebA3896 12 None None None 56478245 Common istB transposase ebB171 40 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477268 Nonpathogen - hypothetical protein ebA3254 1 None None None 56478694 Common deaD ATP-dependent RNA helicase DeaD ebA5738 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 56479109 Common - hypothetical protein ebA6418 50 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 56476144 Common - predicted ABC-type transport system involved in resistance to organic solvents, permease component ebA1312 150 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 56477342 Nonpathogen - hypothetical protein ebA3372 1 None None None 56477530 Common - conserved hypothetical protein, predicted ATPase with chaperone activity ebA3716 27 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 56478349 Nonpathogen - hypothetical protein ebA5129 1 None None None 56478241 Common tnpF16 putative transposase, fragment ebA4928 46 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56477348 Common - predicted nucleoside-diphosphate-sugar epimerase ebA3382 141 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56478183 Common nuoH NADH dehydrogenase I, chain H ebA4842 190 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 56476124 Common tatA twin argininte translocase protein A ebB38 59 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 56477251 Common - putative ribose-phosphate pyrophosphokinase ebA3224 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 56479516 Common ada methylated DNA-protein cysteine methyltransferase ebA7193 161 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 56479371 Nonpathogen - hypothetical protein ebA6899 1 None None None 56475649 Common - hypothetical protein ebA410 22 None None None 56477485 Common - predicted ABC-type Fe3+-hydroxamate transport system, periplasmic component ebA3624 52 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 56478268 Nonpathogen - hypothetical protein ebA4975 1 None None None 56475617 Common - hypothetical protein ebA350 7 COG1396 HipB, Predicted transcriptional regulators Transcription 56476137 Common bolA BolA-like putative cell cycle protein ebA1303 102 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 56479534 Common - ABC transporter, ATP-binding protein ebA7225 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 56478232 Common gspE3 general secretory pathway protein E ebA4914 213 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 56478306 Nonpathogen - hypothetical protein ebA5064 1 None None None 56479248 Common moaE molybdenum cofactor biosynthesis protein E ebA6671 158 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 56478510 Nonpathogen - hypothetical protein ebD92 3 None None None 56478361 Common - conserved hypothetical protein, putative NnrS family ebA5142 51 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 56476449 Common - hypothetical protein ebA1863 11 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 56477886 Nonpathogen - predicted acyl carrier protein ebB145 6 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56478699 Nonpathogen - hypothetical protein ebA5743 1 None None None 56475864 Common - hypothetical protein ebA822 35 COG1656 COG1656, Uncharacterized conserved protein Function unknown 56479041 Common pabB putative PARA-aminobenzoate synthetase component I protein ebA6309 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 56478266 Common clpX ATP-dependent protease ATP-binding subunit ebA4971 229 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 56477230 Nonpathogen - hypothetical protein ebA3189 1 None None None 56476290 Common - hypothetical protein ebA1558 22 None None None 56477986 Common corA magnesium Mg(2+)/cobalt Co(2+) transport protein ebA4496 178 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 56478887 Nonpathogen - hypothetical protein ebA6039 1 None None None 56478987 Common - hypothetical protein ebB222 4 None None None 56478698 Common hutH histidine ammonia-lyase, predicted methylene imidazolone (MIO) cofactor ebA5742 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 56475479 Nonpathogen - hypothetical protein ebA82 1 None None None 56479498 Nonpathogen - hypothetical protein ebA7160 1 None None None 56477349 Common - putative transglycosylase ebA3385 158 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56479480 Common ilvI thiamine pyrophosphate dependent acetolactate synthase ebA7130 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 56475951 Common - probable transmembrane protein ebA972 62 COG3164 COG3164, Predicted membrane protein Function unknown 56475544 Common dnrD1 transcriptional regulator, Dnr type ebA189 152 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56475569 Common - N6 adenine-specific DNA methyltransferase ebA253 47 COG1002 COG1002, Type II restriction enzyme, methylase subunits Defense mechanisms 56475835 Common dapA dihydrodipicolinate synthase ebA774 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 56475870 Common icd2 isocitrate dehydrogenase isozyme 2, monomeric type, NADP-specific ebA832 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 56478567 Common istB transposition helper protein ebA5498 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478283 Common - aldehyde:ferredoxin oxidoreductase,tungsten-containing ebA5005 57 COG2414 COG2414, Aldehyde:ferredoxin oxidoreductase Energy production and conversion 56476071 Common petA iron-sulfur subunit of cytochrome bc1 ebA1198 90 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 56479452 Common - predicted glycosyl transferase, family 2 ebA7076 115 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56478087 Common - hypothetical protein ebA4689 4 None None None 56476435 Common exbB MotA/TolQ/ExbB proton channel family protein ebA1841 142 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 56476697 Common - hypothetical protein ebA2284 16 COG3671 COG3671, Predicted membrane protein Function unknown 56477029 Common trmE tRNA modification GTPase TrmE ebA2841 221 COG0486 ThdF, Predicted GTPase General function prediction only 56476353 Nonpathogen - hypothetical protein ebA1698 6 None None None 56479475 Common - hypothetical protein ebA7121 185 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 56476004 Common rpiA ribose-5-phosphate isomerase A ebA1080 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 56476927 Common - hypothetical protein ebA2648 19 COG5373 COG5373, Predicted membrane protein Function unknown 56476115 Common sucD succinyl-CoA synthetase subunit alpha ebA1271 213 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 56479021 Common nosF putative ATP-binding protein ebA6267 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 56477211 Common - fragment of potassium transport system protein Kup2 ebD71 25 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 56479545 Common - phage-related minor tail protein ebA7243 27 COG5281 COG5281, Phage-related minor tail protein Function unknown 56478371 Common - transcriptional regulator, AraC family ebA5163 81 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 56476795 Common - hypothetical protein ebA2421 33 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 56475595 Common - putative dehydrogenase ebA309 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56478559 Common - putative phage portal protein ebA5484 67 COG4695 COG4695, Phage-related protein Function unknown 56476526 Nonpathogen - hypothetical protein ebB56 9 None None None 56479415 Common - hypothetical protein ebA6997 9 None None None 56477875 Common revt3 reverse transcriptase/retron type, probably fragment ebA4308 85 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 56478201 Common hptG heat shock protein 90 ebA4865 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 56479312 Common - hypothetical protein, fragment of flavin-containing monoxygenase ebA6775 130 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 56476219 Common - hypothetical protein ebA1434 9 COG4701 COG4701, Uncharacterized protein conserved in bacteria Function unknown 56478434 Common bzdR anaerobic benzoate catabolism transcriptional regulator ebA5278 190 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 56475442 Common - hypothetical protein ebA22 3 None None None 56477594 Common rplC 50S ribosomal protein L3 ebA3828 217 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 56475526 Common - conserved hypothetical protein, possibly exonuclease ebA166 194 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 56476633 Common - hypothetical protein ebA2161 32 COG4185 COG4185, Uncharacterized protein conserved in bacteria Function unknown 56477369 Nonpathogen - hypothetical protein ebA3424 1 None None None 56477043 Nonpathogen - hypothetical protein ebA2856 1 None None None 56478723 Common ped2 (S)-1-Phenylethanol dehydrogenase ebA5789 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56476887 Common rnfC electron transport complex protein rnfC (Nitrogen fixation protein rnfC) ebA2579 75 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 56478093 Common acxC acetone carboxylase gamma subunit ebA4702 22 COG4647 AcxC, Acetone carboxylase, gamma subunit Secondary metabolites biosynthesis, transport, and catabolism 56475889 Common - hypothetical protein ebA863 9 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 56476252 Common slyB outer membrane lipoprotein ebA1484 8 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 56478273 Common - hypothetical protein ebA4984 114 COG1204 COG1204, Superfamily II helicase General function prediction only 56478049 Common - hypothetical protein ebA4612 79 COG2962 RarD, Predicted permeases General function prediction only 56476940 Common istBp probable transposition helper protein, middle fragment ebA2672 116 None None None 56475710 Common - predicted transcriptional regulator, rf2 family ebA537 148 COG1959 COG1959, Predicted transcriptional regulator Transcription 56476175 Nonpathogen - hypothetical protein ebA1363 1 None None None 56476192 Common - probable N6-adenine-specific methylase ebA1396 206 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 56477964 Common glpK glycerol kinase ebA4462 174 COG0554 GlpK, Glycerol kinase Energy production and conversion 56476616 Common - hypothetical protein ebB63 11 COG1432 COG1432, Uncharacterized conserved protein Function unknown 56476791 Common - adenine specific DNA methylase MOD ebA2416 122 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 56475550 Common istA transposase ebA204 83 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477075 Nonpathogen - hypothetical protein ebA2909 1 None None None 56477375 Common - acyl-CoA synthetase ebA3433 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56475553 Nonpathogen - hypothetical protein ebA213 1 None None None 56478583 Nonpathogen - hypothetical protein ebA5530 1 None None None 56476008 Common argA N-acetylglutamate synthase ebA1090 192 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 56476412 Common - HlyD family secretion protein ebA1805 135 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56478290 Common - predicted nucleoside-diphosphate-sugar epimerase ebA5020 63 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56476598 Nonpathogen - hypothetical protein ebA2104 1 None None None 56476796 Common - hypothetical protein ebA2423 21 None None None 56477664 Common - hypothetical protein ebB138 19 None None None 56476247 Common accC acetyl-CoA carboxylase biotin carboxylase subunit ebA1474 229 COG0439 AccC, Biotin carboxylase Lipid metabolism 56478713 Nonpathogen - hypothetical protein ebA5769 1 None None None 56477610 Common rplR 50S ribosomal protein L18 ebB130 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 56475993 Common - conserved hypothetical protein, of unknown function ebA1059 23 COG3807 COG3807, Uncharacterized protein conserved in bacteria Function unknown 56477238 Common - hypothetical protein with response regulator domain ebD72 112 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 56478834 Common - hypothetical protein, phage-related ebD106 32 COG4679 COG4679, Phage-related protein Function unknown 56478939 Common trpS tryptophanyl-tRNA synthetase ebA6131 237 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56476861 Common tnp24 predicted transposase ebA2525 54 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478444 Common bzdV subunit of oxidoreductase of unknown function, conserved in Azoarcus-type benzoate degradation gene clusters ebA5294 226 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 56476009 Common - hypothetical protein ebA1094 198 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 56477831 Common - probable transmembrane protein ebA4234 32 None None None 56477165 Common - sensor histidine kinase ebA3063 217 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56477993 Common - hypothetical protein ebA4507 69 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 56478791 Common - hypothetical ATP-binding protein ebA5895 35 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 56476069 Common petC cytochrome C1 subunit of cytochrome bc1 ebA1196 80 COG2857 CYT1, Cytochrome c1 Energy production and conversion 56476952 Nonpathogen - hypothetical protein ebA2695 1 None None None 56475576 Nonpathogen - hypothetical protein, INTERPRO suggestion: Rhodopsin-like G-protein coupled receptor superfamily ebA272 2 None None None 56475721 Common phaE putative monovalent cation/H+ antiporter subunit E ebA555 48 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 56477298 Common - hypoxanthine-guanine phosphoribosyltransferase ebA3304 151 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 56477670 Common - siderophor receptor, TonB-dependent ebA3939 122 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 56477920 Common ada 6-O-Methylguanine-methyltransferase ebA4378 200 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 56476201 Common pth peptidyl-tRNA hydrolase ebA1411 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 56478225 Common gspL general secretion pathway protein L ebA4900 12 COG3297 PulL, Type II secretory pathway, component PulL Intracellular trafficking and secretion 56479403 Common - putative phospholipase D family protein ebA6964 153 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 56475961 Nonpathogen - hypothetical protein ebA995 1 None None None 56478560 Common - conserved hypothetical protein, putative major phage head protein/prohead proteinase ebA5486 41 COG3740 COG3740, Phage head maturation protease General function prediction only 56478940 Common - hypothetical protein ebA6132 141 COG1354 COG1354, Uncharacterized conserved protein Function unknown 56478311 Common phbC putative poly-beta-hydroxyalkanoate synthase ebA5073 76 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 56476403 Nonpathogen - hypothetical protein ebA1781 1 None None None 56477995 Common ispB polyprenyl synthetase ebA4512 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 56477206 Common glnK P2-like signal transmitter protein GlnK ebB95 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 56477604 Common rplN 50S ribosomal protein L14 ebB127 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 56478075 Common - acyl-CoA synthetase ebA4661 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56478715 Common xccB biotin carboxyl carrier subunit of acetyl-CoA carboxylase-like protein ebA5773 176 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 56475920 Common - hypothetical protein ebB29 8 COG5416 COG5416, Uncharacterized integral membrane protein Function unknown 56476843 Common - hypothetical protein ebA2494 8 None None None 56477918 Nonpathogen - hypothetical protein ebA4375 1 None None None 56478776 Common - hypothetical protein ebD14 41 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 56479032 Common narG nitrate reductase, alpha chain ebA6286 93 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 56476783 Common - hypothetical protein ebA2409 22 None None None 56477000 Nonpathogen - hypothetical protein ebA2786 2 None None None 56477047 Nonpathogen - hypothetical protein ebA2861 1 None None None 56476026 Common hemH phosphoribosylaminoimidazole-succinocarboxamide synthase ebA1125 129 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 56475640 Nonpathogen - hypothetical protein ebA397 1 None None None 56476097 Common spoU tRNA/rRNA methyltransferase protein ebA1246 214 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 56479464 Common - cation/multidrug efflux pump protein ebA7101 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 56479271 Nonpathogen - hypothetical protein ebA6701 1 None None None 56478293 Common - hypothetical protein ebA5028 115 COG2353 COG2353, Uncharacterized conserved protein Function unknown 56477557 Common araC transcriptional regulator, AraC family ebA3764 68 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 56477727 Common mltE transglycosylase ebA4038 99 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56479229 Nonpathogen - hypothetical protein ebA6643 1 None None None 56477509 Common - hypothetical protein ebA3674 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 56478953 Common fcbC predicted thioesterase ebA6156 62 COG0824 FcbC, Predicted thioesterase General function prediction only 56477856 Common tnp35 transposase, is4 family ebA4272 41 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476059 Common - two-component response regulatory protein ebA1182 211 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478576 Common istA transposase fragment ebA5511 63 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479161 Common - acyl-CoA synthetase ebA6518 219 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56478755 Common infB translation initiation factor IF-2 ebA5841 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 56475858 Nonpathogen - hypothetical protein ebA809 2 None None None 56476921 Common hslU ATP-dependent protease ATP-binding subunit ebA2637 212 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 56479261 Common sdhB succinate dehydrogenase iron-sulfur subunit ebA6689 195 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 56476834 Common - hypothetical protein ebA2475 10 None None None 56478630 Nonpathogen - hypothetical protein ebA5608 1 None None None 56476712 Common - hypothetical protein ebA2308 7 None None None 56477143 Common gatC putative glutamine amidotransferase,subunit C ebA3026 71 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 56476313 Common gspK general secretory pathway protein K ebA1612 12 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 56478429 Common asnB asparagine synthetase (glutamine amidotransferase) protein ebA5271 158 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 56478933 Common gcvP1 glycine dehydrogenase ebA6124 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 56478861 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (FirA protein) ebA5998 151 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 56478422 Common - hypothetical protein ebB186 14 None None None 56479291 Common - transcriptional regulator, TetR family ebA6738 5 COG1309 AcrR, Transcriptional regulator Transcription 56479515 Common alkA DNA-3-methyladenine glycosidase II ebA7191 110 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 56476574 Common - putative acyl-CoA dehydrogenase ebA2055 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56477431 Common paaY putative carbonic anhydrase/acetyltransferase ebA3540 202 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 56475496 Common sua5 putative translation factor (SUA5) ebA110 238 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 56477599 Common rplV 50S ribosomal protein L22 ebA3832 214 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 56476326 Common - predicted polysaccharide biosynthesis protein ebA1630 159 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56478115 Common - FAD dependent oxidoreductase ebA4737 197 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56477412 Nonpathogen - hypothetical protein ebA3506 1 None None None 56477652 Common - hypothetical protein ebB137 47 COG2361 COG2361, Uncharacterized conserved protein Function unknown 56477861 Common - predicted molecular weight phosphotyrosine protein phosphatase ebA4284 21 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 56478258 Common - hypothetical protein ebA4959 95 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 56477498 Common - hypothetical protein ebA3650 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 56476877 Common - hypothetical protein ebA2554 17 COG3189 COG3189, Uncharacterized conserved protein Function unknown 56475805 Common DCTP dicarboxylate transport protein ebA729 85 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 56475449 Common - UDP-glucose/GDP-mannose dehydrogenase family protein ebA35 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 56477598 Common rpsS 30S ribosomal protein S19 ebB126 244 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 56478534 Common - probable hydrolase ebA5444 150 COG0546 Gph, Predicted phosphatases General function prediction only 56476764 Common tnpF8 transposase, fragmentary gene ebA2385 14 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478044 Common - hypothetical protein ebA4602 2 None None None 56478036 Common - conserved hypothetical protein, predicted membrane-bound metal-dependent hydrolase ebA4590 19 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 56476980 Common fdhA formate dehydrogenase alpha subunit, molybdenum or tungsten enzyme ebA2749 215 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 56478769 Common - hypothetical protein ebA5862 39 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 56478536 Common yceF maf-like protein, possibly implicated in inhibition of septum formation ebA5450 189 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 56478471 Nonpathogen - hypothetical protein ebA5335 1 None None None 56477719 Common cysG uroporphyrinogen-III methylase, c-terminal half ebA4025 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 56476854 Common - hypothetical protein ebB80 18 None None None 56476645 Common - putative pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein ebA2186 159 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 56475941 Common nudH dinucleoside polyphosphate hydrolase ebA951 111 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56477704 Common rfaF ADP-heptose-LPS heptosyltransferase II ebA3998 98 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 56477848 Common - glycosyl transferase group 1 ebA4262 221 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56477733 Common - putative transcription regulator protein, IclR family ebA4048 124 COG1414 IclR, Transcriptional regulator Transcription 56475653 Nonpathogen - hypothetical protein ebA418 1 None None None 56476228 Common ftsW cell division protein FtsW ebA1445 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 56479323 Common gumB polysaccharide export protein ebA6799 115 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 56477259 Nonpathogen - hypothetical protein ebA3235 1 None None None 56477951 Common - putative iron-sulfur protein, related to alpha subunit of ring-dioxygenase ebA4443 81 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 56479235 Common - hypothetical protein ebA6653 100 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 56477403 Nonpathogen - hypothetical protein ebA3486 1 None None None 56477502 Nonpathogen - hypothetical protein ebA3659 1 None None None 56478812 Common istB transposition helper protein ebA5933 16 None None None 56475686 Common int phage-related integrase ebA495 195 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56477493 Common - putative acyl-CoA thiolase ebA3639 175 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56477472 Common hcrB 4-hydroxybenzoyl-CoA reductase, beta subunit ebA3602 61 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 56479367 Common - hypothetical protein ebA6885 13 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 56476985 Common - ABC-transporter ebA2755 143 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56479448 Common fabF1 3-oxoacyl-(acyl carrier protein) synthase I ebA7072 208 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56477276 Common tnp31 transposase, is4 family ebA3270 41 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476893 Common - hypothetical protein ebA2590 33 COG4325 COG4325, Predicted membrane protein Function unknown 56475458 Nonpathogen - hypothetical protein ebA47 1 None None None 56476392 Common - hypothetical protein ebA1764 54 COG0762 COG0762, Predicted integral membrane protein Function unknown 56478728 Common - lipid-transfer protein ebA5797 99 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56476806 Common - conserved hypothetical plasmid protein ebA2435 23 None None None 56475744 Common - conserved hypothetical protein, predicted sulfatase family ebA598 66 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 56477050 Nonpathogen - hypothetical protein ebA2864 1 None None None 56479336 Common - sensory box histidine kinase ebA6824 222 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 56479525 Nonpathogen - hypothetical protein ebA7211 1 None None None 56479146 Common - probable glycoprotease ebA6494 179 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 56476503 Common pinR site-specific recombinase/DNA invertase ebA1940 116 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 56477894 Common - hypothetical protein ebA4336 11 COG2732 COG2732, Barstar, RNAse (barnase) inhibitor Transcription 56478007 Common - hypothetical protein ebA4536 9 COG1661 COG1661, Predicted DNA-binding protein with PD1-like DNA-binding motif General function prediction only 56476281 Common - hypothetical protein ebA1543 52 COG4115 COG4115, Uncharacterized protein conserved in bacteria Function unknown 56477272 Nonpathogen - hypothetical protein ebA3259 1 None None None 56479089 Common - succinyl-diaminopimelate desuccinylase ebA6388 209 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 56477784 Common - cation transport ATPase ebA4146 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 56476817 Common - hypothetical protein ebA2455 12 None None None 56478474 Common istA transposase ebA5342 70 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477741 Common - putative ABC transporter protein ebA4059 178 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 56478189 Common nuoN NADH dehydrogenase subunit N ebA4848 206 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 56476773 Common - hypothetical protein ebA2395 23 None None None 56477112 Common - hypothetical protein ebA2974 23 COG4394 COG4394, Uncharacterized protein conserved in bacteria Function unknown 56476231 Common murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate--D-alanyl-D-alanyl ligase protein ebA1449 203 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 56479214 Common dsbC periplasmic thiol:disulfide interchange protein ebA6610 63 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 56479344 Nonpathogen - hypothetical protein ebA6840 1 None None None 56479528 Common - conserved hypothetical protein, related to putative virulence-associated proteins and nitrogen regulatory protein NtrP ebA7217 14 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 56475915 Common - hypothetical protein ebA893 10 None None None 56477199 Common ppsB phenylphosphate synthase beta subunit ebA3143 141 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56476532 Common - putative glutathione S-transferase P subunit ebA1984 18 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56477246 Common - putative response regulator receiver protein ebA3210 123 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 56475912 Common - propable polB ebA890 29 COG3298 COG3298, Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA replication, recombination, and repair 56478199 Common - putative peptidoglycan-binding protein ebA4863 105 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 56476393 Common proC pyrroline-5-carboxylate reductase ebA1766 215 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 56475954 Common - hypothetical protein ebA981 27 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 56478710 Common - hypothetical protein ebA5766 18 None None None 56477658 Common - hypothetical protein ebA3914 72 COG1556 COG1556, Uncharacterized conserved protein Function unknown 161350047 Common glgB glycogen branching enzyme ebA7003 146 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 56476482 Common bbsH putative E-phenylitaconyl-CoA hydratase c2A309 182 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56475981 Common gpmB phosphoglycerate mutase 2 ebA1038 150 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 56476018 Nonpathogen - hypothetical protein ebA1110 1 None None None 56476159 Common lnt carbon-nitrogen hydrolase:apolipoprotein N-acyltransferase ebA1334 155 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 56479185 Common - pyrimidine dimer DNA glycosylase ebA6557 7 None None None 56476424 Common lgt prolipoprotein diacylglyceryl transferase ebA1825 206 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 56475786 Common - conserved hypothetical protein, potential type III restriction enzyme ebA675 14 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 56477748 Common mug T/U mismatch-specific DNA glycosylase ebA4070 41 COG3663 Mug, G:T/U mismatch-specific DNA glycosylase DNA replication, recombination, and repair 56476010 Common - hypothetical protein ebA1095 60 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56478773 Common - hypothetical protein ebA5867 7 None None None 56477121 Common coaT CoA-transferase ebA2992 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56479001 Common - DNA-binding response regulator ebA6235 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478879 Nonpathogen - hypothetical protein ebA6029 2 None None None 56475942 Common proS prolyl-tRNA synthetase ebA950 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56479424 Common - predicted glycosyl transferase probable ADP-heptose:LPS heptosyltransferase ebA7020 20 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 56477792 Common dctQ C4-dicarboxylate transport system, permease small subunit ebA4159 38 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 56479337 Common yfiQ acyl-CoA synthetase (ADP forming) ebA6829 197 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 56478001 Nonpathogen - hypothetical protein ebA4524 1 COG3577 COG3577, Predicted aspartyl protease General function prediction only 56479268 Common citE malyl-CoA lyase or Citrate lyase, beta subunit ebA6697 72 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 56476894 Common - hypothetical protein ebA2594 13 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 56478862 Common fabZ (3R)-hydroxyacyl-[acyl carrier protein] dehydratase ebA5999 185 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 56476170 Common istB transposition helper protein ebA1353 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476185 Common - hypothetical protein ebA1381 2 None None None 56475625 Common istA transposase ebA364 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479557 Nonpathogen - hypothetical protein ebA7271 1 None None None 56477698 Common - predicted O-Antigen Polymerase ebA3990 12 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 56476870 Common - 2-hydroxychromene-2-carboxylate isomerase family protein ebA2541 41 COG3917 NahD, 2-hydroxychromene-2-carboxylate isomerase Secondary metabolites biosynthesis, transport, and catabolism 56478146 Common ppiA peptidyl-prolyl cis-trans isomerase precursor (PPIase) ebA4790 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 56478837 Nonpathogen - hypothetical protein ebA5962 1 None None None 56476303 Common - putative ABC transporter ebA1592 93 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 56477427 Common mdoB phosphoglycerol transferase I ebA3535 48 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 56479251 Common mobB molybdopterin-guanine dinucleotide biosynthesis protein B ebA6674 107 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 56478220 Common - probable transport system ATP-binding protein ebA4892 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 56479285 Common - response regulator ebA6729 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56476364 Common - hypothetical protein ebD38 36 COG3744 COG3744, Uncharacterized protein conserved in bacteria Function unknown 56476670 Common - probable regulatory protein ebA2237 51 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 56476752 Common - hypothetical protein, putative efflux system c1A283 97 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 56475508 Common - hypothetical protein ebA137 17 COG1161 COG1161, Predicted GTPases General function prediction only 56475779 Common parC DNA topoisomerase IV subunit A ebA664 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 56479502 Common rplS 50S ribosomal protein L19 ebA7169 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 56475500 Common iorB indolepyruvate oxidoreductase subunit B ebA121 104 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 56476587 Nonpathogen - hypothetical protein ebA2083 1 None None None 56475451 Common - response regulatory protein ebA37 204 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56476011 Common suhB Myo-inositol-1(Or 4)-monophosphatase ebA1097 202 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 56476333 Common - probable RND efflux transporter ebA1647 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 56478993 Common dnaJ DnaJ class protein ebD108 226 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56478343 Common fimT type 4 fimbrial pilin related transmembrane protein similar to FimT protein ebA5118 20 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 56478785 Common - hypothetical protein ebA5884 22 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476022 Nonpathogen - hypothetical protein ebB34 3 None None None 56476378 Common thiE thiamine-phosphate pyrophosphorylase ebB48 202 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 56479447 Nonpathogen - hypothetical protein ebA7069 6 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 56478237 Common - hypothetical protein ebA4921 138 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 56478174 Common tpiA triosephosphate isomerase ebA4831 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 56476254 Common - conserved hypothetical protein, predicted histidine triad (HIT) protein family ebA1488 177 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 56478480 Nonpathogen - hypothetical protein ebA5361 1 None None None 56478135 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase ebB163 197 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 56476213 Nonpathogen - hypothetical protein ebA1427 1 None None None 56479198 Common - hypothetical protein ebA6579 27 COG5340 COG5340, Predicted transcriptional regulator Transcription 56475731 Nonpathogen - hypothetical protein ebA570 1 None None None 56476946 Common - hypothetical protein ebA2684 8 COG3756 COG3756, Uncharacterized protein conserved in bacteria Function unknown 56479085 Common smc chromosome segregation ATPase ebA6384 184 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 56478331 Common - hypothetical protein ebD86 53 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 56479173 Common - hypothetical protein ebA6535 33 COG2606 EbsC, Uncharacterized conserved protein Function unknown 56476463 Common - enoyl-CoA hydratase c2A174 183 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56476993 Common - beta-ketoadipyl CoA thiolase ebA2768 177 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56478406 Common - hypothetical protein ebA5234 2 None None None 56479201 Common - predicted DNA helicase ebA6583 37 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 56478549 Common rseB putative sigma factor regulatory protein ebA5465 47 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 56476488 Common bbsC subunit of 2-[hydroxy(phenyl)methyl]-succinyl-CoA DH c2A314 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56476831 Nonpathogen - hypothetical protein ebA2471 1 None None None 56478760 Common - DnaK suppressor protein ebB202 160 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 56475994 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase ebA1060 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 56478090 Nonpathogen - hypothetical protein ebA4698 1 None None None 56476343 Common - predicted gram-negative bacterial type I secretion protein ebA1673 107 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56476842 Common - hypothetical protein ebA2492 29 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 56479112 Nonpathogen - hypothetical protein ebA6423 2 None None None 56477193 Common ppcX probable UbiD-like carboxylase subunit encoded in anaerobic phenol operon ebA3134 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 56476544 Nonpathogen - putative protein of the plasmid stabilization system ebA2003 3 COG3668 ParE, Plasmid stabilization system protein General function prediction only 56475733 Common tnp14 transposase, is4 family ebA575 32 COG5421 COG5421, Transposase DNA replication, recombination, and repair 56478638 Nonpathogen - hypothetical protein ebB198 1 None None None 56479536 Nonpathogen - hypothetical protein ebA7228 1 None None None 56476729 Common - putative deoxyribonucleotide triphosphate pyrophosphatase c1A234 232 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 56478144 Common lpxH UDP-2,3-diacylglucosamine hydrolase ebA4786 80 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 56478458 Common - feruloyl-CoA synthase ebA5317 202 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56478600 Common - cation transporter ebA5555 89 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 56477338 Nonpathogen - hypothetical protein ebA3362 8 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 56475738 Common - DNA repair exonuclease ebA587 41 COG1409 Icc, Predicted phosphohydrolases General function prediction only 56478490 Common pdh probable phenylacetaldehyde dehydrogenase ebA5381 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56477156 Common lipB putative lipoate-protein ligase B (Lipoate biosynthesis protein B) ebA3048 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 56479072 Common - hypothetical protein ebB228 10 None None None 56479397 Nonpathogen - hypothetical protein, INTERPRO-suggestion: probable Apolipoprotein A/E/C3 ebA6953 1 None None None 56476999 Nonpathogen - hypothetical protein ebA2783 2 None None None 56478750 Common - 3-hydroxybutyrate dehydrogenase ebA5833 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56478286 Common - hypothetical protein ebA5013 71 COG2928 COG2928, Uncharacterized conserved protein Function unknown 56475485 Nonpathogen - hypothetical protein ebA93 1 None None None 56479297 Common tnp50 transposase ebA6749 64 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478159 Common fur ferric uptake regulation protein (Ferric uptake regulator) ebB167 192 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 56476784 Common - hypothetical protein ebA2410 20 None None None 56477756 Common - hypothetical protein ebA4098 130 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 56476986 Common bclA benzoate-CoA ligase ebA2757 220 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56477908 Common - conserved hypothetical protein, radical SAM family ebA4360 27 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 56478882 Common - conserved hypothetical protein, predicted HicB family potentially involved in pilus regulation ebA6033 30 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 56476075 Nonpathogen - hypothetical protein ebA1205 1 None None None 56478294 Common - hypothetical protein ebA5030 22 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 56476573 Common hyuB hydantoin utilization protein B ebA2053 95 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476605 Common - putative periplasmic component of ABC-type transport system ebA2115 27 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 56479048 Common - hypothetical protein ebA6317 46 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 56475638 Nonpathogen - hypothetical protein ebA394 1 None None None 56476109 Common hisS histidyl-tRNA synthetase ebA1260 248 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56476456 Common ahcY S-adenosyl-L-homocysteine hydrolase ebA1874 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 56475586 Nonpathogen - hypothetical protein ebA295 1 None None None 56475902 Common nirJ heme D1 biosynthesis protein NIRJ ebA877 154 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 56476132 Common hisC histidinol-phosphate aminotransferase ebA1297 231 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 56477710 Nonpathogen - potential post-segregation antitoxin similar to CcdA ebB141 4 COG5302 COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid General function prediction only 56477840 Common - polysaccharide chain length determinant protein ebA4249 80 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 56478640 Common padC2 molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase ebA5630 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 56475511 Nonpathogen - hypothetical protein ebA140 1 None None None 56477651 Common - predicted nucleotidyltransferase ebA3900 48 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 56477985 Nonpathogen - INTERPRO: probable Peptidase S8 and S53, subtilisin, kexin, sedolisin ebA4494 1 None None None 56475674 Common - cytochrome P450-like putative monoxygenase,C-terminal fragment ebA473 61 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 56476849 Common - hypothetical protein ebD62 17 None None None 56476496 Common - predicted universal stress protein (Usp) ebA1926 87 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 56477182 Nonpathogen - hypothetical protein ebA3113 1 None None None 56478327 Common argD acetylornithine aminotransferase ebA5095 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 56475865 Common - probably thioesterase ebB21 8 COG0824 FcbC, Predicted thioesterase General function prediction only 56476914 Common cysN ATP sulfurylase, large subunit ebA2628 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 56477136 Common - hypothetical protein ebA3013 32 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 56476116 Common sucC succinyl-CoA synthetase subunit beta ebA1272 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 56476308 Nonpathogen - hypothetical protein ebA1600 1 None None None 56478645 Common - acyl-CoA dehydrogenase ebA5641 164 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56479563 Common - hypothetical protein ebA7287 39 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 56475605 Common - conserved hypothetical protein, predicted universal stress protein family ebA326 95 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 56477247 Common istA transposase ebA3214 56 None None None 56477878 Common exoW putative glycosyltransferase, possibly involved in succinoglycan biosynthesis protein ebA4311 10 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56475668 Common istB transposition helper protein ebA455 53 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477331 Nonpathogen - hypothetical protein ebA3351 1 None None None 56477817 Common msrA peptide methionine sulfoxide reductase MsrA ebA4211 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 56476959 Common - predicted membrane protein ebA2713 131 COG2860 COG2860, Predicted membrane protein Function unknown 56477419 Nonpathogen ccmD cytochrome c biogenesis protein ebD8 1 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 56479061 Common istA transposase ebA6342 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475974 Common mogA molybdenum cofactor biosynthesis protein ebA1027 185 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 56475661 Common - hypothetical protein ebA435 4 None None None 56477464 Common - Fe2-S2-type ferredoxin ebB118 62 COG3411 COG3411, Ferredoxin Energy production and conversion 56478280 Common - putative sodium bile acid symporter family protein ebA5001 139 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 56478819 Nonpathogen - hypothetical protein, INTERPRO suggestion: probable VanZ like protein ebA5942 1 None None None 56476101 Common - hypothetical protein ebA1251 26 COG3242 COG3242, Uncharacterized protein conserved in bacteria Function unknown 56477382 Common - putative multidrug resistance protein ebA3446 116 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56477526 Common - hypothetical protein ebA3711 10 COG4655 COG4655, Predicted membrane protein Function unknown 56476685 Common pilO fimbrial type-IV assembly protein PilO ebA2264 48 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 56476465 Common - electron transfer flavoprotein:ubiquinone oxidoreductase c2A178 108 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 56477139 Common phoB phosphate regulon transcriptional regulatory protein phoB ebA3019 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56479533 Nonpathogen - hypothetical protein ebA7224 1 None None None 56479010 Common - ABC transporter, permease protein ebA6251 37 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 56476450 Common - hypothetical protein ebD44 19 None None None 56478544 Common fabF beta-ketoacyl-(acyl-carrier-protein) synthase ebA5459 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476525 Common opmR outer membrane protein oprM precursor ebA1973 113 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56476138 Common - probable ABC transporter ebA1304 162 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 56479008 Common - transcriptional regulator, TetR family ebA6247 65 COG1309 AcrR, Transcriptional regulator Transcription 56475763 Common istB transposition helper protein ebA633 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478655 Common - probable ABC transporter substrate binding protein ebA5660 184 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 56478982 Common cysT membrane component of thiosulfate ABC-transporter ebA6206 229 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 56477516 Common cobQ cobyric acid synthase ebA3690 150 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 56477593 Common rpsJ 30S ribosomal protein S10 ebB124 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 56478622 Common - hypothetical protein ebA5595 8 None None None 56475964 Common atoC Sigma-54 dependent DNA-binding response regulator ebA1002 172 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56478022 Common gltL ABC transporter protein, ATP-binding component ebA4567 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 56478205 Common - hypothetical protein ebA4870 58 COG3825 COG3825, Uncharacterized protein conserved in bacteria Function unknown 56475623 Nonpathogen - hypothetical protein ebA360 1 None None None 56477356 Common - putative ATP-binding ABC transporter protein ebA3394 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 56475692 Common - TetR-family transcriptional regulator ebA508 10 COG1309 AcrR, Transcriptional regulator Transcription 56476826 Common - hypothetical protein ebA2467 23 None None None 56477231 Nonpathogen - INTERPRO: probable Binding-protein-dependent transport systems inner membrane component ebA3191 1 None None None 56479219 Nonpathogen - hypothetical protein ebD18 3 None None None 56478504 Common padJ anaerobic phenylacetate CoA ligase ebA5402 131 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 56478591 Common era GTP-binding protein Era ebA5540 228 COG1159 Era, GTPase General function prediction only 56478790 Common - predicted glycosyltransferase ebA5893 130 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56477130 Common atpH F1-ATP synthase, delta subunit ebA3003 172 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 56477098 Common htpX heat shock protein HtpX ebA2953 190 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 56477697 Common tnp34 transposase (IS4) ebA3989 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56478300 Nonpathogen - hypothetical protein ebA5049 1 None None None 56477083 Common - hypothetical protein ebA2924 181 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56478573 Common tnp43 transposase ebA5507 28 None None None 56477767 Common ntrC nitrogen assimilation response regulator ebA4116 214 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56479436 Common glnB P2-like signal transmitter protein GlnB ebA7048 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 56476730 Common hemN coproporphyrinogen III oxidase c1A39 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 56475827 Common istA transposase ebA765 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476154 Common pilU2 twitching mobility protein pilU ebA1324 161 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 56477475 Common - l-asparagine amidohydrolase ebA3606 134 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 56475819 Common - hypothetical protein ebB19 19 None None None 56478915 Common - conserved hypothetical protein, putative thioesterase ebA6092 137 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 56476516 Common badR transcriptional regulator protein, possibly involved in regulating genes for cyclohexanecarboxylate metabolism ebA1957 90 COG1846 MarR, Transcriptional regulators Transcription 56476930 Common - hypothetical protein ebA2654 83 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 56476382 Common pilH type IV pilus response regulator PilH ebB50 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56477443 Nonpathogen - hypothetical protein ebA3554 1 None None None 56477513 Common rhlE2 ATP-dependent RNA helicase ebA3682 231 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 56478192 Nonpathogen - hypothetical protein ebA4852 1 None None None 56476087 Common pulF bacterial type II secretion system protein ebA1225 139 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 56477456 Common cutA2 thiol-disulfide interchange protein, potentially involved in divalent cation resistance ebA3571 122 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56479129 Common dnaQ DNA-directed DNA polymerase, epsilon chain ebA6456 190 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 56476710 Common - putative pirin ebA2304 142 COG1741 COG1741, Pirin-related protein General function prediction only 56478605 Common istB transposase/IS protein ebA5561 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476149 Common - hypothetical protein ebA1318 17 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 56475987 Common - carboxy-terminal processing protease ebA1050 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 56476566 Common - fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase ebA2038 176 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56477578 Common dldH D-lactate dehydrogenase (acceptor: cytochrome) ebA3803 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56479191 Nonpathogen - hypothetical protein ebA6570 1 None None None 56478803 Common - hypothetical protein ebA5915 10 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 56476027 Common - predicted integral membrane protein ebA1128 38 COG5473 COG5473, Predicted integral membrane protein Function unknown 56476534 Common trxB thioredoxin reductase ebA1986 168 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 56479441 Common - predicted transmembrane protein ebA7058 19 COG4648 COG4648, Predicted membrane protein Function unknown 56476123 Common tatB Sec-independent protein translocase subunit B ebD2 40 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 56476276 Common - hypothetical protein ebA1532 45 COG1434 COG1434, Uncharacterized conserved protein Function unknown 56476165 Nonpathogen - hypothetical protein ebA1343 1 None None None 56476389 Common pyrB aspartate carbamoyltransferase catalytic subunit ebA1759 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 56477057 Common - probable ATP-binding ABC transporter protein ebA2876 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 56477148 Common mreC putative rod shape-determining MreC transmembrane protein ebA3035 147 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 56478961 Common - hypothetical protein ebA6169 26 COG3471 COG3471, Predicted periplasmic/secreted protein Function unknown 56477163 Common - hypothetical protein ebA3059 8 COG4907 COG4907, Predicted membrane protein Function unknown 56476906 Nonpathogen - hypothetical protein ebA2614 1 None None None 56478584 Nonpathogen - hypothetical protein ebA5531 1 None None None 56478614 Common dgkA diacylglycerol kinase ebA5579 75 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 56478815 Nonpathogen - hypothetical protein ebA5936 2 None None None 56478529 Common uvrB excinuclease ABC subunit B ebA5438 235 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 56477824 Common coxB cytochrome C oxidase, subunit 2 ebA4227 152 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 56476265 Common - predicted Coenzyme F420-reducing hydrogenase,beta subunit ebA1514 18 COG1035 FrhB, Coenzyme F420-reducing hydrogenase, beta subunit Energy production and conversion 56477524 Common - hypothetical protein ebA3709 8 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 56476737 Common reg3 regulatory protein, LysR-family c1A53 190 COG0583 LysR, Transcriptional regulator Transcription 56477091 Common - hypothetical protein ebA2941 16 None None None 56477956 Common ribF probable riboflavin biosynthesis protein ebA4449 210 COG0196 RibF, FAD synthase Coenzyme metabolism 56478840 Common - nucleic acid-binding protein, contains PIN domain ebA5967 23 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56478501 Common padG phenylglyoxylate:acceptor oxidoreductase ebA5399 127 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 56476747 Common tnp22 transposase, IS5 family c1A74 39 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56477449 Common hupA DNA-binding protein hu-alpha ebB116 207 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 56477390 Nonpathogen - predicted nucleic acid-binding protein,contains PIN domain ebB111 9 COG4113 COG4113, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56479224 Common - hypothetical protein ebA6631 5 None None None 56478108 Common phbC poly-beta-hydroxybutyrate polymerase ebA4728 73 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 56477227 Common metH B12-dependent methionine synthase ebA3184 178 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 56478128 Common leuC isopropylmalate isomerase large subunit ebA4757 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 56475890 Common - hypothetical protein ebA864 188 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 56477011 Common - hypothetical protein ebA2801 14 None None None 56476978 Common trkA potassium uptake protein, TrkA family ebA2742 99 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 56477538 Common - putative two-component sensor protein ebA3729 80 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 56478739 Common - hypothetical protein ebA5819 180 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 56478086 Common - hypothetical protein ebA4686 43 COG3271 COG3271, Predicted double-glycine peptidase General function prediction only 56477378 Nonpathogen - hypothetical protein ebA3440 1 None None None 56478166 Common ftsJ cell division protein FtsJ ebA4820 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 56475689 Common - putative GTP-binding protein ebA503 216 COG2262 HflX, GTPases General function prediction only 56478870 Common bioH BioH ebA6017 131 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56478675 Nonpathogen - hypothetical protein ebA5696 1 None None None 56478736 Nonpathogen - hypothetical protein ebA5813 1 None None None 56477310 Common pyrE orotate phosphoribosyltransferase ebA3324 107 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 56477501 Common ruvC crossover junction endodeoxyribonuclease RuvC ebA3657 196 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 56476958 Common livM predicted branched-chain amino acid ABC-type transport system, permease components ebA2710 135 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 56479016 Common - putative cytochrome c-type protein ebA6262 45 COG3245 CycB, Cytochrome c5 Energy production and conversion 56477290 Common - predicted CRISPR-associated helicase ebA3291 77 COG1203 COG1203, Predicted helicases General function prediction only 56478813 Common - fragment of putative epimerase ebD105 31 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 56477706 Common rfaE hypothetical protein ebA4001 106 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 56478191 Common nrdA ribonucleotide reductase, Coenzyme B12-dependent ebA4850 224 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 56475687 Common int phage-related integrase ebA497 83 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56477245 Common - cytochrome b561 family protein ebA3208 55 COG3658 COG3658, Cytochrome b Energy production and conversion 56479546 Nonpathogen - hypothetical protein ebA7252 2 None None None 56479127 Common mutS DNA mismatch repair protein ebA6453 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 56477354 Common - Sigma 54 modulation protein / S30EA ribosomal protein ebB108 127 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 56477317 Common tnpF10 putative transposase, fragment ebB104 29 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476734 Common int integrase (int) c1A49 102 COG0582 XerC, Integrase DNA replication, recombination, and repair 56478506 Common - predicted thioesterase ebB192 25 COG5496 COG5496, Predicted thioesterase General function prediction only 56479088 Common pilU3 hypothetical protein ebA6387 210 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 56476689 Nonpathogen - hypothetical protein ebA2269 1 None None None 56476833 Common - hypothetical gene ebA2473 9 None None None 56477333 Nonpathogen - hypothetical protein ebD76 4 None None None 56476070 Common petB cytochrome B subunit of cytochrome bc1 ebA1197 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 56478513 Common tdk thymidylate kinase ebA5415 213 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 56477847 Common - hypothetical protein ebA4261 41 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 56478184 Common nuoI NADH dehydrogenase subunit I ebA4843 191 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 56478746 Common - hypothetical protein ebA5828 9 None None None 56475832 Common rumA 23S rRNA 5-methyluridine methyltransferase ebA771 203 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 56476108 Common - putative transmembrane protein ebA1259 73 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 56477950 Nonpathogen - hypothetical protein ebA4441 1 None None None 56477228 Common - hypothetical protein ebA3186 48 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 56479009 Common - hypothetical protein ebA6248 136 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56479535 Common int probable site-specific recombinase, prophage insertion ebA7227 23 COG4389 COG4389, Site-specific recombinase DNA replication, recombination, and repair 56476707 Common tdcF putative translation initiation inhibitor, yjgF family ebB66 187 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 56479384 Common glgX glycogen operon protein GlgX (alpha amylase) ebA6923 146 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 56476079 Common - putative serine/threonine protein kinase ebA1212 157 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 56478172 Common pstA phosphate ABC transporter, permease protein ebA4829 225 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 56475829 Nonpathogen - hypothetical protein ebA767 1 None None None 56475614 Common - hypothetical protein ebA343 10 COG1403 McrA, Restriction endonuclease Defense mechanisms 56475749 Nonpathogen dgkA diacylglycerol kinase ebA607 5 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 56478465 Nonpathogen - hypothetical protein, INTERPRO prediction: regulator of chromosome condensation ebA5327 3 COG2327 WcaK, Uncharacterized conserved protein Function unknown 56478599 Nonpathogen - hypothetical protein ebA5553 1 None None None 56476818 Nonpathogen - hypothetical protein ebA2457 1 None None None 56478165 Common - predicted RNA-binding protein containing KH domain, possibly ribosomal protein ebA4819 82 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 56478369 Common tonB predicted gram-negative bacterial tonB protein ebA5156 49 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 56479461 Common dnaL DNA ligase ebA7094 34 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 56477959 Common - probable iron-sulfur 4Fe-4S ferredoxin protein ebA4454 134 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 56475460 Common - hypothetical protein ebA50 60 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 56477058 Common - predicted transcriptional regulator ebA2878 138 COG1959 COG1959, Predicted transcriptional regulator Transcription 56477663 Common czcA probable cation efflux system protein CZCA ebA3926 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 56478621 Nonpathogen - hypothetical protein, INTERPRO suggestion: probable Haloacid dehalogenase-like hydrolase ebA5593 1 COG0546 Gph, Predicted phosphatases General function prediction only 56476459 Nonpathogen - hypothetical protein ebA1879 1 None None None 56478782 Common - hypothetical protein ebA5879 2 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56475487 Nonpathogen - hypothetical protein ebA96 1 None None None 56478320 Common adk adenylate kinase ebA5087 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 56476156 Common - D,D-heptose 1,7-bisphosphate phosphatase ebA1328 126 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 56477715 Common - putative TONB-dependent receptor ebA4013 111 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 56479529 Common - conserved hypothetical protein, similar to virulence associated protein VapC ebD130 65 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56477686 Common nadD putative cytidylyltransferase ebA3972 121 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 56478849 Common map methionine aminopeptidase ebA5984 245 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 56476278 Common - glycosyl transferase ebA1535 178 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56478714 Common tnp45 transposase (IS4) ebA5771 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56477074 Nonpathogen - hypothetical protein ebA2908 1 None None None 56476684 Common pilP type IV fimbrial biogenesis protein PilP ebA2261 37 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 56478379 Common qhpC quinohemoprotein amine dehydrogenase gamma subunit ebA5182 5 None None None 56478419 Nonpathogen - Ap4A phosphorylase II ebA5257 12 COG4360 APA2, ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) Nucleotide transport and metabolism 56476484 Nonpathogen bbsJ hypothetical protein c2B002 1 None None None 56479189 Common - predicted glycosyl transferase ebA6565 22 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 56478310 Nonpathogen - hypothetical protein ebA5072 1 None None None 56476126 Common hisE phosphoribosyl-ATP pyrophosphohydrolase ebA1290 176 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 56477458 Common - universal stress protein (Usp) ebA3574 104 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 56476085 Nonpathogen - hypothetical protein ebA1221 1 None None None 56477755 Common dnaB replicative DNA helicase protein ebA4079 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 56479329 Common - putative terpenoid synthase ebA6810 113 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 56479213 Common traB plasmid-like sex pilus assembly protein TraB ebA6607 25 None None None 56475641 Common - hypothetical protein ebA398 21 None None None 56475621 Nonpathogen - hypothetical protein ebA356 2 None None None 56479241 Common oppB oligopeptide transport system permease protein oppB ebA6661 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 56478212 Common rnfG electron transport complex protein ebA4881 50 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 56477807 Common hyfF hydrogenase 4 subunit F ebA4190 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 56479132 Common - Zn-dependent hydrolase ebA6461 185 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56476595 Common - NADH oxidase (NOXB-2 ebA2099 204 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 56479064 Common istB transposition helper protein ebA6347 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477088 Nonpathogen - hypothetical protein ebA2938 1 None None None 56475719 Common phaG putative monovalent cation/H+ antiporter subunit G ebA553 27 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 56479272 Common - ABC transporter, transmembrane region ebA6704 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 56476706 Common recG RecG-like helicases ebA2297 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 56477087 Common fdhA formate dehydrogenase, alpha subunit ebA2936 192 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56477628 Common - Zn-dependent hydrolase ebA3861 100 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56478941 Common - putative transcriptional regulator,helix-turn-helix type ebA6134 144 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 56478358 Common - metallo-beta-lactamase superfamily protein ebA5139 125 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 56476499 Common - hypothetical protein ebA1932 18 None None None 56478257 Common nadC nicotinate-nucleotide pyrophosphorylase ebA4956 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 56479202 Nonpathogen - hypothetical protein ebA6585 2 None None None 56477406 Common gmk guanylate kinase ebA3494 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 56475490 Common - hypothetical protein ebA101 28 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 56478604 Common - hypothetical protein ebA5559 14 COG2267 PldB, Lysophospholipase Lipid metabolism 56477768 Common ntrB nitrogen assimilation sensor kinase ebA4117 199 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 56478123 Common ilvB acetolactate synthase catalytic subunit ebA4751 223 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 56476405 Common - outer membrane protein, ortholog involved in agglutination in some bacteria ebA1783 126 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56477380 Common marR transcriptional regulator, MarR family ebA3444 137 COG1846 MarR, Transcriptional regulators Transcription 56478516 Common tatD Mg-dependent DNase ebA5421 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 56476522 Common - transcriptional regulator, TetR family ebA1969 89 COG1309 AcrR, Transcriptional regulator Transcription 56478609 Common plsC putative 1-acylglycerol-3-phosphate O-acyltransferase ebA5567 67 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 56477008 Common ptsI PEP-utilizing enzyme, component EI of PTS system ebA2795 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 56475907 Nonpathogen - hypothetical protein ebA884 1 None None None 56476361 Common - weak: Predicted nucleotidyltransferase ebD37 12 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 56478370 Common - hypothetical protein ebA5160 93 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 56475857 Nonpathogen - hypothetical protein ebA808 1 None None None 56476211 Nonpathogen - hypothetical protein ebA1424 1 None None None 56475662 Common - hypothetical protein ebA436 5 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56476820 Common - single-strand DNA-binding protein ebB77 21 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 56479174 Common gst glutathione S-transferase ebA6536 102 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56477192 Common ppcY probable UbiX-like carboxylase subunit,encoded in anaerobic phenol operon ebA3133 152 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 56476327 Common wbiH putative undecaprenyl phosphate N-acetylglucosaminyltransferase ebA1631 141 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 56477544 Common pccB propionyl-CoA carboxylase beta subunit ebA3742 205 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 56477900 Common pilC type IV fimbrial biogenesis protein, pilC ebA4345 142 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 56477988 Common pntA pyridine nucleotide transhydrogenase subunit alpha ebA4498 101 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 56476625 Common - putative porin precursor transmembrane protein ebA2143 45 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 56476823 Common - hypothetical protein ebA2464 4 None None None 56477418 Common ccmC heme exporter, permease ebA3518 115 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 56478392 Common pgi glucose-6-phosphate isomerase ebA5208 194 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 56475742 Common pat aromatic amino acid aminotransferase ebA596 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56478170 Common pstS phosphate ABC transporter, periplasmic phosphate-binding protein ebA4826 169 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 56475772 Common - sun homolog protein ebA650 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 56476083 Nonpathogen - hypothetical protein ebA1217 1 None None None 56479400 Nonpathogen - hypothetical protein ebA6959 1 COG5487 COG5487, Small integral membrane protein Function unknown 56478671 Common tnp44 transposase ebA5690 42 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476220 Nonpathogen - hypothetical protein ebA1435 1 None None None 56475885 Common - hypothetical protein ebA855 131 COG0432 COG0432, Uncharacterized conserved protein Function unknown 56478010 Nonpathogen coxX predicted membrane protein, putative accessory subunit of cytochrome c oxidase ebD10 2 None None None 56479407 Common - hypothetical protein ebA6971 4 None None None 56475456 Nonpathogen - hypothetical protein ebA45 1 None None None 56476434 Common - hypothetical protein, possibly TonB-like energy transducer ebA1839 43 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 56478106 Common - hypothetical protein ebA4726 153 COG1496 COG1496, Uncharacterized conserved protein Function unknown 56477026 Common sun tRNA and rRNA cytosine-C5-methylase sun ebA2833 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 56478590 Common rnc ribonuclease III ebA5539 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 56477164 Common fixJ transcriptional regulatory protein fixJ ebA3060 219 COG4566 TtrR, Response regulator Signal transduction mechanisms 56476603 Common - ATPase component ABC-type transport system ebA2113 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 56476655 Common - putative toluene tolerance protein ebA2206 90 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 56475665 Common - hypothetical protein ebA443 13 None None None 56477561 Common - hypothetical protein ebA3772 31 COG4679 COG4679, Phage-related protein Function unknown 56475704 Common - DNA repair protein similar to radC family ebA527 177 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 56478863 Common lpxA UDP-N-acetylglucosamine acyltransferase ebA6000 163 COG1043 LpxA, Acyl- acyl carrier protein 56477819 Common - conserved hypothetical protein, predicted Cation efflux family protein ebA4214 207 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 56478198 Nonpathogen - hypothetical protein ebA4862 1 COG5481 COG5481, Uncharacterized conserved small protein containing a coiled-coil domain Function unknown 56476214 Nonpathogen - hypothetical protein ebA1428 1 None None None 56476447 Nonpathogen - hypothetical protein ebA1858 1 None None None 56476423 Common - hypothetical protein ebA1823 41 COG3132 COG3132, Uncharacterized protein conserved in bacteria Function unknown 56475863 Common - hypothetical protein ebA821 15 None None None 56479493 Nonpathogen - hypothetical protein ebB246 1 None None None 56476934 Common STM0901 hypothetical protein ebA2664 42 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 56478712 Common tnpF transposase, fragment ebD98 26 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56478763 Common - hypothetical protein ebA5850 42 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 56476362 Nonpathogen - hypothetical protein ebA1714 1 None None None 56477237 Nonpathogen - hypothetical protein ebA3197 1 None None None 56477111 Common efp elongation factor P ebA2973 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 56477778 Nonpathogen - hypothetical protein ebA4135 1 None None None 56476781 Common - hypothetical protein ebA2407 21 None None None 56478751 Common - hypothetical protein ebA5834 46 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 56477205 Common amt ammonium transporter ebA3151 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 56478654 Common - putative peptide ABC transporter permease protein ebA5658 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 56479049 Common int phage-related integrase ebA6319 41 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56476339 Common - phosphoprotein phosphatase ebA1663 133 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 56475820 Common - hypothetical protein ebA753 30 COG4983 COG4983, Uncharacterized conserved protein Function unknown 56477532 Nonpathogen flp pilus assembly protein, pilin component ebD9 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 56475936 Common rplM 50S ribosomal protein L13 ebA938 229 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 56477723 Common - transcription regulator protein, LysR family ebA4032 122 COG0583 LysR, Transcriptional regulator Transcription 56476944 Common istB transposition helper protein ebA2680 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478550 Nonpathogen rseC hypothetical protein, INTERPRO suggestion: probable positive regulator of sigma(E) ebA5468 1 COG3086 RseC, Positive regulator of sigma E activity Signal transduction mechanisms 56478143 Common metZ O-succinylhomoserine sulfhydrylase ebA4785 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 56475505 Common aceE pyruvate dehydrogenase subunit E1 ebA133 140 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 56477466 Common - hypothetical protein ebA3590 21 COG3154 COG3154, Putative lipid carrier protein Lipid metabolism 56478619 Nonpathogen - hypothetical protein ebA5590 1 None None None 161350051 Common rpsA 30S ribosomal protein S1 ebA903 222 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 56475739 Common - conserved hypothetical protein, related to eukaryotic diacylglycerol kinase ebA590 101 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 161350049 Common rpsL 30S ribosomal protein S12 ebA3820 240 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 56478998 Common - ABC transporter permease protein ebA6231 151 COG1511 COG1511, Predicted membrane protein Function unknown 56475996 Common - conserved hypothetical protein, predicted phosphoribosyltransferase family ebA1065 170 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 56478132 Common - hypothetical protein ebA4764 34 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 56477583 Common rplK 50S ribosomal protein L11 ebA3812 247 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 56478985 Common rimL probable acetyltransferase ebA6209 71 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 56477339 Common mesJ1 predicted ATPase of the PP-loop superfamily implicated in cell cycle control ebA3365 166 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 56477671 Common metK S-adenosylmethionine synthetase ebA3942 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 56479093 Common - hypothetical protein ebA6395 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 56478858 Common - membrane-associated Zn-dependent protease ebA5995 209 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 56477170 Common - hypothetical protein ebA3075 64 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 56477539 Common fumC fumarate hydratase ebA3735 232 COG0114 FumC, Fumarase Energy production and conversion 56478542 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase ebA5457 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56477749 Nonpathogen - hypothetical protein ebA4071 1 None None None 56479455 Nonpathogen - hypothetical protein ebA7082 2 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 56476644 Nonpathogen - hypothetical protein ebA2185 1 None None None 56477618 Common rpsD 30S ribosomal protein S4 ebA3852 221 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 56479103 Common lasT RNA methyltransferase ebA6408 156 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 56476844 Common - hypothetical protein ebA2499 5 None None None 56478789 Common - predicted UDP-N-acetylglucosamine 2-epimerase ebA5890 155 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 56476968 Nonpathogen merR probable bacterial regulatory protein, MerR family ebB87 5 None None None 56478226 Common gspK2 general secretory pathway protein K ebA4904 42 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 56475787 Common - conserved hypothetical protein, probably fragment ebA682 39 COG1479 COG1479, Uncharacterized conserved protein Function unknown 56479356 Common - hypothetical protein ebA6868 190 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 56476564 Common - putative thioesterase ebA2036 24 COG0824 FcbC, Predicted thioesterase General function prediction only 56478525 Common - putative ATP-dependent protease ebA5433 90 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 56479096 Common hscB co-chaperone HscB ebA6397 53 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 56476143 Common - mce related protein ebA1311 106 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 56475923 Common aroO bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase ebA904 242 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 56476051 Nonpathogen - hypothetical protein ebA1171 1 None None None 56477806 Common hyfG subunit of formate hydrogenlyase-like membrane complex, related to large subunit of hydrogenase ebA4187 53 COG3261 HycE, Ni,Fe-hydrogenase III large subunit Energy production and conversion 56477103 Common - hypothetical protein ebA2962 41 COG2922 Smg, Uncharacterized protein conserved in bacteria Function unknown 56477107 Nonpathogen - hypothetical protein ebA2968 1 None None None 56476545 Common - hypothetical protein ebB60 11 None None None 56479193 Nonpathogen - hypothetical protein ebA6571 1 None None None 56479432 Common ftsK cell division FtsK transmembrane protein ebA7041 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 56477915 Common gcp probable O-sialoglycoprotein endopeptidase ebA4371 246 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 56478709 Common - conserved hypothetical protein, BNR domain protein ebA5764 35 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 56477473 Common hcrA 4-hydroxybenzoyl-CoA reductase, alpha subunit ebA3603 121 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 56479279 Nonpathogen - hypothetical protein ebA6716 1 None None None 56477695 Common - glycosyl transferase ebA3985 210 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56479004 Common - conserved hypothetical protein, predicted heme oxygenase family ebA6241 26 COG0819 TenA, Putative transcription activator Transcription 56476117 Common - hypothetical protein ebA1274 13 None None None 56478360 Common dnr transcriptional regulator Dnr/Nnr type ebA5141 167 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56475637 Nonpathogen - hypothetical protein ebA392 1 None None None 56479233 Nonpathogen - hypothetical protein ebA6649 1 None None None 56478098 Common - acyl-CoA synthetase ebA4717 220 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476554 Common - predicted signal transduction protein ebA2016 45 COG3434 COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains Signal transduction mechanisms 56478926 Common gcvR glycine cleavage system regulatory protein ebA6107 31 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 56476321 Nonpathogen - hypothetical protein ebA1624 1 None None None 56475788 Common tnp16C IS66 Orf3 like transposase ebA688 28 None None None 56476091 Common - hypothetical protein ebA1234 7 COG4677 PemB, Pectin methylesterase Carbohydrate transport and metabolism 56475525 Common - putative solute:Na+ symporter ebA165 176 COG4147 DhlC, Predicted symporter General function prediction only 56475952 Common glnE putative glutamate-ammonia-ligase adenylyltransferase ebA977 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 56476164 Nonpathogen - hypothetical protein ebA1340 1 None None None 56478496 Common padB phenylacetyl-CoA:acceptor oxidoreductase ebA5393 123 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56478700 Common - hypothetical protein ebA5744 171 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 56478964 Common - hypothetical protein ebA6173 32 COG1694 MazG, Predicted pyrophosphatase General function prediction only 56476272 Common - conserved hypothetical protein, similar to virulence-associated protein VapC ebD36 53 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56476929 Common pal outer membrane protein, porin-associated lipoprotein ebA2652 147 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56478026 Common sdhC putative succinate dehydrogenase cytochrome B subunit (Succinate dehydrogenase, cytochrome b556 subunit ebB154 43 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 56478209 Common - hypothetical protein ebB169 23 None None None 56478277 Common arsC arsenate reductase, gene: ARSC ebA4998 125 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 56479254 Common pemT phosphatidylethanolamine N-methyltransferase ebA6680 90 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56476257 Common - hypothetical protein, potentially DNA-binding ebD35 19 COG1396 HipB, Predicted transcriptional regulators Transcription 56477876 Common tnpF14 putative transposase (IS4, fragment) ebA4309 21 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56479390 Common - hypothetical protein ebA6939 5 COG3233 COG3233, Predicted deacetylase General function prediction only 56477428 Common - hypothetical protein ebB115 33 COG3162 COG3162, Predicted membrane protein Function unknown 56478004 Common - hypothetical protein ebB152 11 COG3546 COG3546, Mn-containing catalase Inorganic ion transport and metabolism 56479488 Nonpathogen - hypothetical protein ebA7147 1 None None None 56475979 Common - conserved hypothetical protein, predicted Tripartite ATP-independent periplasmic transporters, DctQ component ebA1036 73 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 56478547 Common rpoE2 RNA polymerase sigma factor RpoE ebA5463 173 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 56479119 Common - sensor histidine kinase ebA6439 191 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56478874 Common - predicted Peptidase M14,carboxypeptidase A family ebA6023 28 COG2866 COG2866, Predicted carboxypeptidase Amino acid transport and metabolism 56475752 Nonpathogen - hypothetical protein ebA611 1 None None None 56475850 Nonpathogen - hypothetical protein ebA798 1 None None None 56478423 Common - hypothetical protein ebA5263 87 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 56478850 Nonpathogen - hypothetical protein ebA5985 1 None None None 56478418 Common - hypothetical protein ebA5255 23 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 56478488 Nonpathogen - hypothetical protein ebB190 1 None None None 56479216 Common traC hypothetical protein ebA6614 39 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 56478082 Common talA transaldolase ebA4676 106 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 56479474 Common panC pantoate-beta-alanine ligase ebA7120 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 56477650 Common pilE2 fimbrial protein precursor PilE (MS11 antigen) ebB136 32 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 56479361 Nonpathogen - hypothetical protein ebA6876 17 COG3629 DnrI, DNA-binding transcriptional activator of the SARP family Signal transduction mechanisms 56478796 Common wbbJ predicted acetyltransferase (isoleucine patch superfamily) ebA5904 11 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 56476342 Common - putative Rotamase (prolyl cis-trans isomerase) ebA1670 45 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56477265 Common terC membrane protein terC ebA3250 95 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 56477795 Common - hypothetical protein ebA4165 54 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 56478269 Common - putative flavodoxin oxidoreductase precursor ebA4977 56 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 56479234 Common - hypothetical protein ebA6652 58 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 56476283 Common istB transposition helper protein ebA1547 53 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479322 Common gumC exopolysaccharide biosynthesis protein ebA6797 156 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 56475960 Common - hypothetical protein ebB32 28 COG4391 COG4391, Uncharacterized protein conserved in bacteria Function unknown 56478717 Common xccA carboxylase subunit of unknown acetyl-CoA carboxylase-like enzyme ebA5776 140 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 56475937 Common - hypothetical protein ebB31 86 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 56476865 Common - hypothetical protein ebA2531 24 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 56479151 Common - YciI-like protein ebA6499 63 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 56477365 Common - predicted membrane protein ebB109 41 COG4125 COG4125, Predicted membrane protein Function unknown 56477232 Common abpE thiamine biosynthesis lipoprotein APBE precursor ebA3192 131 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 56478820 Common - hypothetical protein ebA5943 12 None None None 56475447 Common - probable serine protease, trypsin family ebA31 91 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 56475563 Common - predicted response regulator receiver ebA240 202 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56479511 Common valS valyl-tRNA synthetase ebA7186 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56478563 Nonpathogen - hypothetical protein ebA5490 1 None None None 56479057 Nonpathogen - hypothetical protein ebA6337 1 None None None 56477976 Nonpathogen - hypothetical protein ebA4479 1 None None None 56477925 Nonpathogen - hypothetical protein ebA4389 1 None None None 56477448 Common nemA flavoprotein NADH-dependent oxidoreductase ebA3561 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 56478411 Common istA transposase ebA5241 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475596 Common - FAD linked oxidase ebA310 158 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56477742 Common - putative ABC transporter protein,ATPase component ebA4061 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 56475792 Common tnpF transposase fragment ebD30 36 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475670 Nonpathogen - hypothetical protein ebA462 1 None None None 56478495 Common padA phenylacetyl-CoA:acceptor oxidoreductase ebA5392 134 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 56476146 Common kefB glutathione-regulated potassium-efflux system protein ebA1314 192 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 56478033 Common korC 2-ketoglutarate: NADP oxidoreductase, gamma subunit ebA4587 188 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 56478988 Common phbC PHA synthase subunit PhaC ebA6212 74 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 56477700 Common - conserved hypothetical protein, predicted protein kinase family ebA3993 5 COG3642 COG3642, Mn2+-dependent serine/threonine protein kinase Signal transduction mechanisms 56478076 Common hmgL 3-hydroxymethylglutaryl-CoA or malyl-CoA lyase ebA4662 143 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 56478059 Common cho excinuclease Cho, similar to DNA polymerase III epsilon subunit family ebA4628 223 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 56479270 Common - hypothetical protein ebA6699 21 COG2114 CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) Signal transduction mechanisms 56478965 Common - phosphate permease ebA6176 141 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 56476779 Common - hypothetical protein ebA2405 20 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 56476295 Common - glycosyl transferase ebA1565 182 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476357 Nonpathogen - hypothetical protein ebA1705 1 None None None 56477947 Common - hypothetical protein ebA4438 78 COG1469 COG1469, Uncharacterized conserved protein Function unknown 56478476 Nonpathogen - hypothetical protein ebA5349 1 None None None 56477603 Common rpsQ 30S ribosomal protein S17 ebC10 227 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 56479162 Common - hypothetical protein putative lipoprotein ebA6519 16 COG3218 COG3218, ABC-type uncharacterized transport system, auxiliary component General function prediction only 56476970 Nonpathogen - hypothetical protein ebA2729 1 None None None 56477897 Common - conserved hypothetical protein, putatives membrane protein ebA4340 74 COG2928 COG2928, Uncharacterized conserved protein Function unknown 56479267 Common mdh malate dehydrogenase ebA6695 94 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 56479391 Common - conserved hypothetical protein, predicted phosphatidic acid-phosphatase related phosphoesterase family ebA6940 21 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 56476857 Nonpathogen - hypothetical protein ebD63 7 None None None 56476245 Common aroQ 3-dehydroquinate dehydratase ebA1471 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 56479209 Nonpathogen - hypothetical protein, possible lipoprotein ebA6593 3 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 56476328 Common galE1 hypothetical protein ebA1635 175 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56477332 Nonpathogen - hypothetical protein ebD75 4 None None None 56477579 Common - transcriptional regulator, AsnC family ebA3804 164 COG1522 Lrp, Transcriptional regulators Transcription 56477927 Common - chromosome partitioning protein, parA family protein ebA4391 217 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56479304 Common - hypothetical protein ebA6758 30 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 56478197 Common metB O-acetylhomoserine aminocarboxypropyltransferase ebA4861 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 56475967 Common - molybdenum enzyme of unknown function, medium subunit ebA1012 162 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 56476287 Nonpathogen - hypothetical protein ebA1552 1 None None None 56477496 Common - hypothetical protein ebB119 36 COG3313 COG3313, Predicted Fe-S protein General function prediction only 56478109 Common phbB acetoacetyl-CoA reductase ebA4729 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56477435 Common paaI Putative thioesterase PaaI involved in aerobic phenylacetate metabolism ebA3544 63 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 56478119 Nonpathogen - hypothetical protein ebA4745 1 None None None 56479027 Common narL nitrate/nitrite response regulator ebA6278 216 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56477010 Common - hypothetical protein ebA2800 10 None None None 56478009 Common ctaC cytochrome c1, probably related to cytocrome c oxidase function ebA4540 20 COG3474 COG3474, Cytochrome c2 Energy production and conversion 56479148 Common ompR osmolarity response regulator ebA6497 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56475862 Common glcB malate synthase G ebA819 71 COG2225 AceB, Malate synthase Energy production and conversion 56476656 Common vacJ putative lipoprotein precursor (VACJ) ebA2208 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 56478352 Common ccoQ cytochrome c oxidase subunit ebC11 16 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 56477320 Common istA transposase ebA3337 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477797 Common gspE2 bacterial type II secretion system protein E ebA4169 204 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 56477888 Common - acyl-CoA dehydrogenase ebA4327 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56479401 Nonpathogen - hypothetical protein ebA6960 1 None None None 56479142 Common - transcriptional regulator ebA6482 189 COG0583 LysR, Transcriptional regulator Transcription 56478333 Nonpathogen - hypothetical protein ebA5103 1 None None None 56479468 Common - hypothetical protein ebA7107 60 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 56477835 Common rpoH RNA polymerase factor sigma-32 ebA4241 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 56475959 Common ilvE branched-chain amino acid aminotransferase ebA993 217 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 56476678 Common gltD glutamate synthase subunit beta ebA2251 186 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 56477607 Common rpsN 30S ribosomal protein S14 ebC1 212 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 56475455 Common lipP lipase ebA43 138 COG0657 Aes, Esterase/lipase Lipid metabolism 56478440 Nonpathogen fxd ferredoxin ebA5289 1 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 56475537 Common norB nitric-oxide reductase subunit B ebA179 135 COG3256 NorB, Nitric oxide reductase large subunit Inorganic ion transport and metabolism 56476256 Common - hypothetical protein ebA1492 59 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 56476767 Common - hypothetical protein ebA2388 28 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 56477587 Common rpoB DNA-directed RNA polymerase subunit beta ebA3818 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 56478864 Common lpxB lipid-A-disaccharide synthase ebA6002 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 56478532 Nonpathogen - hypothetical protein ebA5442 1 None None None 56476320 Common - predicted Cephalosporin hydroxylase ebA1623 22 COG3510 CmcI, Cephalosporin hydroxylase Defense mechanisms 56477556 Common - sensory box histidine kinase/response regulator,N-terminal part ebA3761 147 COG2202 AtoS, FOG: PAS/PAC domain Signal transduction mechanisms 56477853 Common algD GDP-mannose 6-dehydrogenase ebA4268 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 56476672 Common - conserved hypothetical protein, predicted peptidase U32 family ebA2241 134 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 56475622 Common tnp7 putative transposase, is4 family ebA358 28 None None None 56476696 Common - D-Ala-D-Ala carboxypeptidase 3 (S13) family ebA2281 108 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 56477504 Common coxB2 probable cytochrome-c oxidase subunit II ebA3665 60 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 56475940 Common - hypothetical protein ebA948 16 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 56478894 Nonpathogen - hypothetical protein ebD101 2 None None None 56479036 Nonpathogen - hypothetical protein ebA6293 5 None None None 56479283 Common - histidine kinase ebA6722 213 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56479431 Common lolA outer membrane lipoprotein carrier protein LolA ebA7039 74 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 56479549 Common - hypothetical protein ebB250 5 None None None 56477531 Common - hypothetical protein, Flp pilus assembly protein,protease ebA3718 6 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56478942 Common rsuA pseudouridylate synthase ebA6135 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 56478051 Common glcG uncharacterized protein, possibly involved in utilization of glycolate or propanediol ebA4614 47 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 56477487 Common phbC putative poly-beta-hydroxybutyrate synthase ebA3628 69 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 56476055 Common hemK protein-glutamine N-methyltransferase ebA1176 224 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 56477258 Nonpathogen - hypothetical protein ebA3234 1 None None None 56475917 Common tnp17 transposase, is4 family ebA897 28 None None None 56476896 Common - hypothetical protein ebA2598 111 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 56479499 Common rpsP 30S ribosomal protein S16 ebB247 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 56476473 Common bssE chaperone c2A306 57 COG0714 COG0714, MoxR-like ATPases General function prediction only 56478505 Common - organic acid-CoA ligase (ADP forming) ebA5403 132 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 56477030 Common yidC preprotein translocase subunit yidC ebA2842 213 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 56475808 Common - putative acyl-CoA dehydrogenase ebA736 161 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56479158 Common - transcriptional regulatory protein,TetR family ebA6513 38 COG1309 AcrR, Transcriptional regulator Transcription 56477491 Nonpathogen - hypothetical protein ebA3636 1 None None None 56479518 Common - putative glycan acetyltransferase ebA7197 105 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 56478452 Common - putative ABC-transporter ebA5306 153 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 56478653 Common - putative peptide ABC transporter permease protein ebA5655 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 56479034 Common narK1 nitrate/proton symporter ebA6289 119 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 56477411 Common dnrE transcriptional regulator Dnr-type ebA3504 128 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56477442 Common paaR probable transcriptional regulator of paa operon ebA3555 35 COG1309 AcrR, Transcriptional regulator Transcription 56476951 Common int phage-related integrase ebA2691 29 None None None 56476591 Common - conserved hypothetical protein, possible maturation factor for molybdenum enzyme ebA2089 90 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 56477065 Common - hypothetical protein ebA2890 74 COG2989 COG2989, Uncharacterized protein conserved in bacteria Function unknown 56477151 Common mrdB rod shape-determining protein ebA3041 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 56476665 Common qhpB quinohemoprotein amine dehydrogenase, subunit beta ebA2230 4 None None None 56476298 Common - hypothetical protein ebA1575 9 COG0457 NrfG, FOG: TPR repeat General function prediction only 56477373 Common - ABC transporter subunit ebA3429 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56477672 Common - lipid A biosynthesis lauroyl acyltransferase ebA3945 109 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 56477866 Common exoV succinoglycan biosynthesis protein ebA4294 15 None None None 56477981 Common - regulatory protein, GntR ebA4487 119 COG2186 FadR, Transcriptional regulators Transcription 56477657 Nonpathogen - hypothetical protein ebA3912 1 None None None 56476193 Common coaD coenzyme A biosynthesis protein: phosphopantetheine adenylylyltransferase ebA1397 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 56477417 Common ccmB heme exporter protein B ebA3516 36 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 56476924 Common - predicted thioesterase ebB84 127 COG0824 FcbC, Predicted thioesterase General function prediction only 56478110 Nonpathogen - hypothetical protein ebA4730 1 None None None 56478912 Nonpathogen - hypothetical protein ebA6089 1 None None None 56475549 Nonpathogen - hypothetical protein ebA202 3 None None None 56477022 Common trkA potassium transporter peripheral membrane component ebA2825 144 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 56476850 Common - hypothetical protein ebA2508 22 None None None 56478100 Common kctB succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B ebA4719 108 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 56475433 Common - hypothetical protein ebB253 8 COG4197 COG4197, Uncharacterized protein conserved in bacteria, prophage-related Function unknown 56477569 Common - DnaJ domain protein ebA3784 8 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56479340 Common - putative disulfide bond chaperone ebA6835 107 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 56476543 Nonpathogen - putative antitoxin, prevent-host-death family protein ebB59 6 None None None 56479542 Common - hypothetical protein ebA7239 7 None None None 56475995 Common cspR RNA methyltransferase CspR (SpoU class) ebB33 156 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 56476174 Common int hypothetical protein ebA1360 134 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56477646 Common pilS sensor kinase PilS ebA3892 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56476302 Common - hypothetical protein ebA1588 17 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56476864 Common - short chain dehydrogenase ebA2528 68 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 56477967 Common - predicted histidine kinase-like ATPase ebA4466 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56477040 Nonpathogen - hypothetical protein ebA2852 1 None None None 56475555 Common int phage-related integrase ebA220 35 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56479250 Common moeA MoeA protein ebA6673 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 56477061 Common cccA probable cytochrome c subunit of cbb3 type cytochrome oxidase ebA2883 73 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56476902 Common prrC anticodon nuclease ebA2609 15 COG4694 COG4694, Uncharacterized protein conserved in bacteria Function unknown 56477129 Common atpF F0-ATP synthase, b subunit ebA3002 67 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 56476638 Common cusA cation efflux system protein ebA2176 178 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 56476852 Common - hypothetical protein ebA2510 22 None None None 56475906 Common nirF NIRF ebA883 39 COG3391 COG3391, Uncharacterized conserved protein Function unknown 56476200 Common rplY 50S ribosomal protein L25/general stress protein Ctc ebA1409 193 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 56477460 Common nodJ nodulation protein J ebA3579 79 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 56477712 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase ebA4008 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 56478218 Common ate arginyl-tRNA-protein transferase ebA4890 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 56479317 Common - putative glycosyl transferase, family 4 ebA6781 132 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 56477961 Common - probable short chain dehydrogenase ebA4458 225 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 56478305 Common - predicted permease ebA5059 99 COG0679 COG0679, Predicted permeases General function prediction only 56477996 Nonpathogen - hypothetical protein ebA4513 3 None None None 56475877 Common rplU 50S ribosomal protein L21 ebB22 212 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 56478804 Common - hypothetical protein ebA5917 8 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 56477048 Nonpathogen - hypothetical protein ebA2862 1 None None None 56476873 Common gshB glutathione synthetase ebA2546 120 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 56476411 Common - putative LuxR-family transcriptional regulator ebA1803 125 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56477554 Common - DNA-binding response regulator ebA3757 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478672 Nonpathogen - hypothetical protein ebA5693 1 None None None 56475884 Common - hypothetical protein ebA853 17 COG4339 COG4339, Uncharacterized protein conserved in bacteria Function unknown 56477621 Common galE UDP-glucose 4-epimerase ebA3856 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 56477771 Common - rhodanese-like protein ebA4122 43 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 56475476 Nonpathogen - hypothetical protein ebB3 3 None None None 56477892 Common - hypothetical protein ebD82 9 None None None 56478724 Common ebdA2 ethylbenzene dehydrogenase, alpha subunit ebA5790 146 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 56476350 Common - hypothetical protein ebB46 18 None None None 56476490 Common bbsA subunit of benzoylsuccinyl-CoA thiolase c2A316 23 COG1545 COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon General function prediction only 56478764 Nonpathogen - hypothetical protein ebA5853 1 None None None 56478976 Common - hypothetical protein ebA6196 30 COG3310 COG3310, Uncharacterized protein conserved in bacteria Function unknown 56479537 Nonpathogen - hypothetical protein ebA7231 1 None None None 56476615 Nonpathogen - hypothetical protein ebA2129 1 None None None 56478759 Common pnp polynucleotide phosphorylase/polyadenylase ebA5846 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 56478890 Common - predicted uncharacterized FAD-dependent dehydrogenase ebA6047 82 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 56476602 Common - conserved hypothetical protein, similar to NnrS (Uncharacterized protein involved in response to NO) ebA2112 29 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 56477595 Common rplD 50S ribosomal protein L4 ebA3829 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 56478972 Common - hypothetical protein ebA6189 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 56476640 Common - haloacid dehalogenase/epoxide hydrolase family protein ebA2180 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 56475512 Common - hypothetical protein ebA142 10 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 56478447 Common oah probable 6-Oxo-cyclohex-1-ene-carbonyl-CoA hydrolase ebA5298 166 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56479420 Common - hypothetical protein ebA7006 10 None None None 56476609 Nonpathogen - hypothetical protein ebA2122 1 None None None 56478946 Common purL phosphoribosylformylglycinamidine synthase ebA6142 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 56478262 Common prkA protein kinase ebA4966 69 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 56479047 Common - predicted multi antimicrobial extrusion protein MatE ebA6316 171 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 56476017 Common fbaA fructose-1,6-bisphosphate aldolase ebA1107 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 56476981 Common fdhB formate dehydrogenase, NAD(P) reducing, beta subunit ebA2750 159 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 56475844 Common istB transposition helper protein ebA788 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56475602 Common acsA acetyl-CoA synthetase ebA321 203 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56478248 Nonpathogen - hypothetical protein ebA4943 1 None None None 56475612 Nonpathogen - hypothetical protein ebA341 1 None None None 56479427 Common - conserved hypothetical protein, possibly flavin-dependent dehydrogenase ebA7030 94 COG0579 COG0579, Predicted dehydrogenase General function prediction only 56476785 Common - hypothetical protein ebB69 15 None None None 56478832 Nonpathogen - hypothetical protein ebA5959 2 COG5652 COG5652, Predicted integral membrane protein Function unknown 56478064 Common doxD terminal quinol oxidase membrane protein subunit similar to DoxD of Acidianus spp. ebB158 51 COG2259 COG2259, Predicted membrane protein Function unknown 56476242 Common mpl putative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-MESO-diamin opimelate ligase ebA1466 209 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 56475582 Common istA transposase (fragment) ebB8 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475497 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit ebA114 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 56478048 Common - putative ammonium transporter ebA4609 197 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 56479560 Common - terminase (bacteriophage), large subunit ebA7278 36 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 56478318 Common lpxK tetraacyldisaccharide 4'-kinase ebA5085 121 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 56475728 Common istA transposase ebA565 67 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477162 Common ttrA putative tetrathionate reductase, subunit A ebD4 95 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56478292 Common - hypothetical protein ebA5022 89 COG2353 COG2353, Uncharacterized conserved protein Function unknown 56479207 Nonpathogen - hypothetical protein ebA6591 3 None None None 56477305 Common - hypothetical protein ebA3316 70 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 56478042 Nonpathogen - hypothetical protein ebA4600 1 None None None 56476319 Common gspE general secretion pathway protein E (Type II traffic warden ATPase) ebA1622 226 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 56477940 Common dcd deoxycytidine triphosphate deaminase ebA4412 151 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 56478016 Common - hypothetical protein ebA4555 12 COG4288 COG4288, Uncharacterized protein conserved in bacteria Function unknown 56479059 Common dcm modification methylase (Cytosine-specific methyltransferase ebA6339 104 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 56475543 Common - predicted nitric oxide reductase activation protein ebA188 45 COG4548 NorD, Nitric oxide reductase activation protein Inorganic ion transport and metabolism 56477167 Common - hypothetical protein ebA3069 49 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 56479443 Common - putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis ebA7063 42 COG4261 COG4261, Predicted acyltransferase General function prediction only 56476396 Common pilU twitching mobility protein PilU, transport fimbria ebA1772 221 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 56477118 Common - putative two component sensor ebA2987 220 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 56475573 Nonpathogen - hypothetical protein ebA267 2 None None None 56477309 Common xthA2 exodeoxyribonuclease III ebA3323 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 56476336 Common - predicted pyridoxamine 5'-phosphate oxidase ebA1656 45 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 56475896 Common rpmI 50S ribosomal protein L35 ebC8 199 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 56479149 Common - sensor histidine kinase ebA6498 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56478884 Common aroA phospho-2-dehydro-3-deoxyheptonate aldolase ebA6035 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 56479372 Common - putative sigma-54 interacting response regulator ebA6902 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56478566 Common istA transposase ebA5496 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476724 Common reg1 transcriptional regulator, TetR family c1A220 61 COG1309 AcrR, Transcriptional regulator Transcription 56477326 Nonpathogen - hypothetical protein ebA3346 1 None None None 56476107 Common - putative quinoprotein ebA1258 88 COG1520 COG1520, FOG: WD40-like repeat Function unknown 56477364 Common murB UDP-N-acetylmuramate dehydrogenase ebA3410 195 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 56476433 Common bfr bacterioferritin ebA1837 103 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 56477400 Common - predicted Transglutaminase-like enzyme, putative cysteine protease ebA3478 30 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 56475838 Common rpoS RNA polymerase sigma factor RpoS ebA778 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 56478235 Common - putative iron binding protein component of ABC iron transporter ebA4918 120 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 56477174 Common lexA LexA repressor ebA3086 172 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 56477514 Common - hypothetical protein ebA3686 7 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 56477144 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B ebA3029 210 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 56479438 Common - hypothetical protein ebA7051 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 56477570 Common - phospholipase A2 family protein ebA3785 178 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56477870 Common - hypothetical protein ebA4298 21 COG3919 COG3919, Predicted ATP-grasp enzyme General function prediction only 56477116 Common - putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) ebA2985 190 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56475528 Common - fusion protein of probable Na-dependent permease domain and histidine kinase domain of putative two-component sensor ebA169 227 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 56476153 Common - conserved hypothetical protein, predicted phasin family ebA1323 16 None None None 56477220 Common - putative amino-acid transmembrane ABC transporter protein ebA3172 151 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 56477171 Common polC hypothetical protein ebA3077 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 161350052 Common putA bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase ebA551 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 56476388 Common pyrR pyrimidine regulatory protein PyrR ebA1757 110 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 56477410 Common cho nuclease subunit Cho of the excinuclease complex (UvrC homolog protein) ebA3500 190 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 56479462 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase ebA7097 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 56476118 Nonpathogen - hypothetical protein ebA1276 1 None None None 56477934 Nonpathogen - hypothetical protein ebA4400 1 None None None 56476052 Common - hypothetical protein ebA1173 13 None None None 56477808 Common hyfE hydrogenase 4 membrane component ebA4191 38 COG4237 HyfE, Hydrogenase 4 membrane component (E) Energy production and conversion 56475655 Common - hypothetical protein ebA421 22 None None None 56475904 Common nirG NirG protein precursor ebA880 49 COG1522 Lrp, Transcriptional regulators Transcription 56476370 Common - predicted esterase ebA1728 47 COG3150 COG3150, Predicted esterase General function prediction only 56477916 Common - hypothetical protein ebA4373 169 COG0344 COG0344, Predicted membrane protein Function unknown 56479133 Common mltE membrane-bound lytic murein transglycosylase D ebA6465 106 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56476446 Common - predicted phage-related membrane protein ebD43 10 None None None 56476576 Common sbmA methylmalonyl-CoA mutase subunit alpha ebA2060 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 56475718 Common - hypothetical protein ebA552 14 None None None 56477132 Common atpG F0F1 ATP synthase subunit gamma ebA3006 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 56479491 Nonpathogen - hypothetical protein ebA7151 4 None None None 56476584 Common - hypothetical protein ebA2078 12 None None None 56477543 Common argK arginine/ornithine transport system ATPase ebA3741 99 COG1703 ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family Amino acid transport and metabolism 56475663 Nonpathogen - hypothetical protein ebA439 1 None None None 56476212 Nonpathogen - hypothetical protein ebA1426 1 None None None 56476982 Nonpathogen - hypothetical protein ebA2751 1 None None None 56478947 Nonpathogen - hypothetical protein ebA6143 1 None None None 56478920 Common - probable Na+/H+ antiporter ebA6098 36 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 56476406 Common - hypothetical protein ebA1785 30 COG3672 COG3672, Predicted periplasmic protein Function unknown 56478295 Common - hypothetical protein ebB174 55 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 56479063 Common istB transposase/IS protein ebA6345 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476950 Common relE RelE-like Cytotoxic translational repressor of toxin-antitoxin stability system ebB86 29 COG4737 COG4737, Uncharacterized protein conserved in bacteria Function unknown 56476110 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ebA1261 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 56476125 Common hitA HIT (Histidine triad) family protein ebA1289 234 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 56476600 Common bfr bacterioferritin subunit ebA2110 103 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 56479175 Common ligT 2'-5' RNA ligase ebA6539 66 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 56476376 Common mgtE magnesium transporter ebA1741 171 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 56478956 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase ebA6160 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 56476908 Common - hypothetical protein ebA2617 52 COG0730 COG0730, Predicted permeases General function prediction only 56477859 Common - hypothetical protein ebA4278 26 COG3919 COG3919, Predicted ATP-grasp enzyme General function prediction only 56478122 Common - long chain fatty-acid CoA ligase ebA4749 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476453 Common infA translation initiation factor IF-1 ebA1871 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 56479494 Common leuA 2-isopropylmalate synthase ebA7154 214 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 56476875 Common - N6 adenine-specific DNA methyltransferase, N12 class ebA2549 44 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 56479539 Nonpathogen - hypothetical protein ebB248 1 None None None 56475736 Common - exo-alpha-1,4-glucosidase ebA583 165 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 56476824 Common - hypothetical protein ebA2465 21 None None None 56477096 Common mobB molybdopterin-guanine dinucleotide biosynthesis protein B ebA2950 106 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 56479487 Common - two component response regulator ebA7146 213 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56476498 Common - hypothetical protein ebA1929 34 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 56477459 Common - predicted integral membrane protein TerC family ebA3576 118 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 56479079 Common - hypothetical protein ebA6372 11 None None None 56476311 Common - hypothetical protein ebA1609 6 None None None 56477308 Common - probable two-component sensor ebA3320 202 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56475629 Common - hypothetical protein ebA370 2 None None None 56476318 Common gspF general secretion pathway protein F ebA1619 144 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 56478350 Common ccoN cytochrome-cbb3 oxidase, subunit I ebA5131 148 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 56478841 Common - HNS-like transcription regulator protein ebB211 14 COG2916 Hns, DNA-binding protein H-NS General function prediction only 56477506 Common - electron transport protein SCO1/SenC ebA3668 50 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 56479164 Common - ATPase component, ABC-type transport system ebA6523 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 56477208 Common - hypothetical protein ebB96 52 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 56479469 Common - hypothetical protein ebA7110 63 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 56478398 Common - putative cytoplasmic protein ebA5221 17 None None None 56478913 Nonpathogen - hypothetical protein ebA6090 1 None None None 56476088 Common - putative type II secretion system protein ebA1226 216 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 56477656 Common ampD N-acetyl-anhydromuranmyl-L-alanine amidase ebA3910 107 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 56477089 Common - cytoplasmic 'private chaperone' of TorD family,probably for assembly of Mo-cofactor in formate dehydrogenase ebA2939 25 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 56477181 Common sbcD exonuclease SbcD ebA3111 100 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 56476155 Common nlaB phospholipid and glycerol acyltransferase ebA1327 187 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 56476244 Common - thioredoxin ebA1468 140 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56476987 Common - hypothetical protein ebA2758 7 None None None 56478737 Common recJ exodeoxyribonuclease VII, single-stranded DNA-specific exonuclease ebA5815 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 56478646 Common ald putative benzaldehyde dehydrogenase ebA5642 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56475461 Nonpathogen - hypothetical protein ebA51 1 None None None 56475694 Common - probable RNA-directed DNA polymerase ebA511 43 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 56476735 Common reg2 regulatory protein, LysR-family c1A250 29 COG0583 LysR, Transcriptional regulator Transcription 56478512 Common - hypothetical protein ebA5414 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 56477313 Common - putative cytoplasmic molybdenum cofactor-containing oxidoreductase ebA3328 181 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56476957 Common - ABC transporter permease protein ebA2706 134 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 56477150 Common - penicillin-binding protein 2 ebA3040 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 56476422 Common ilvD dihydroxy-acid dehydratase ebA1822 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 56478656 Common gntR transcriptional regulator ebA5664 119 COG1802 GntR, Transcriptional regulators Transcription 56479118 Common - conserved hypothetical protein, potential periplasmic binding protein ebA6438 77 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 56475831 Nonpathogen - hypothetical protein ebA769 1 None None None 56478378 Common qhpX quinohemoprotein amine dehydrogenase, putative SAM-radical dependent activating subunit ebA5181 115 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 56478745 Common msrB peptide methionine sulfoxide reductase ebA5827 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 56479157 Common etfB electron transfer flavoprotein, beta-subunit ebA6511 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 56475580 Common - helicase (putative RNA helicase), fragment ebA280 16 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 56477291 Nonpathogen - hypothetical protein ebA3292 1 None None None 56479408 Common rimK glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase) ebA6974 57 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 56475560 Common apbA ketopantoate reductase ApbA ebA232 137 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 56478023 Common - hypothetical protein ebA4568 147 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 56476040 Common dusB tRNA-dihydrouridine synthase ebA1152 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 56478003 Common - probable metal transporter ebA4529 54 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 56478190 Common - NUDIX family hydrolase ebA4849 175 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56478185 Common nuoJ NADH dehydrogenase I, chain J ebA4844 100 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 56478579 Nonpathogen - hypothetical protein ebA5520 4 None None None 56479472 Common - deoxynucleoside kinase ebA7118 39 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 56476417 Common - ABC transporter, permease protein ebA1813 151 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 56477958 Common - hypothetical protein ebA4453 200 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 56478393 Common - hypothetical protein ebA5211 20 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 56476539 Common pilA fimbrial protein PilA ebA1997 8 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 56477707 Nonpathogen - hypothetical protein ebA4002 1 None None None 56475789 Common tnp16A IS66 Orf1 transposase ebA690 55 None None None 56476015 Common pgk phosphoglycerate kinase ebA1103 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 56477620 Common rplQ 50S ribosomal protein L17 ebB133 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 56477353 Common ptsN phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) ebA3391 137 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 56477688 Common - putative transmembrane protein ebA3976 10 COG5473 COG5473, Predicted integral membrane protein Function unknown 56475615 Common - hypothetical protein ebA346 84 COG2135 COG2135, Uncharacterized conserved protein Function unknown 56479369 Nonpathogen - hypothetical protein ebA6897 1 None None None 56475809 Common - putative alcohol dehydrogenase related to anaerobic 3-hydroxybenzoate metabolism ebA738 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56479321 Common - hypothetical protein containing domain similar to chaperone protein type DnaJ ebA6795 47 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 56479307 Common istB transposase/IS protein ebA6765 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478054 Common - conserved hypothetical protein, predicted NnrS family involved in response to NO ebA4619 55 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 56475780 Nonpathogen - hypothetical protein ebA665 1 None None None 56475828 Nonpathogen - hypothetical protein ebA766 1 None None None 56476279 Nonpathogen - hypothetical protein ebA1541 1 None None None 56478684 Common paaA2 hypothetical protein ebA5720 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 56478018 Common - hypothetical protein ebA4558 47 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 56478164 Common - hypothetical protein ebA4818 22 None None None 56475748 Common tnaA tryptophanase ebA605 44 COG3033 TnaA, Tryptophanase Amino acid transport and metabolism 56476845 Common - hypothetical protein ebA2500 12 None None None 56477687 Common - putative transmembrane protein ebA3974 23 None None None 56477770 Common glnA glutamine synthetase protein ebA4121 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 56477059 Common ccoN cytochrome C oxidase subunit transmembrane protein ebA2880 88 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 56479199 Common - hypothetical protein ebA6580 26 COG2253 COG2253, Uncharacterized conserved protein Function unknown 56478927 Nonpathogen - hypothetical protein ebA6109 1 None None None 56479482 Common ilvC ketol-acid reductoisomerase ebA7134 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 56478466 Common - conserved hypothetical protein, predicted radical-SAM emzyme ebA5328 50 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 56478843 Nonpathogen - hypothetical protein ebA5971 1 None None None 56477359 Common - CinA-related protein (competence-inducible) ebA3399 192 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 56478779 Common - hypothetical protein ebA5875 60 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 56476614 Nonpathogen - hypothetical protein ebA2127 1 None None None 56476208 Common purB adenylosuccinate lyase ebA1420 232 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 56475636 Common - hypothetical protein ebA387 25 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 56477334 Common - hypothetical protein ebA3353 23 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 56476723 Common fadE acyl-CoA dehydrogenase c1A18 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56477760 Common - hypothetical protein ebA4102 184 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 56479328 Common - probable terpenoid synthase-related protein ebA6809 96 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 56479003 Common - short chain dehydrogenase ebA6240 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 56479355 Common - hypothetical protein ebA6866 9 None None None 56478230 Common gspG2 general secretory pathway protein G ebB170 75 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56476338 Nonpathogen - hypothetical protein ebA1660 1 None None None 56476548 Common tnp12A transposase (fragment) ebA2007 64 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475530 Nonpathogen - hypothetical protein ebA171 1 None None None 56476967 Common recC exodeoxyribonuclease V, gamma subunit ebA2724 64 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 56477108 Common mucD putative serine protease MucD ebA2969 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 56478363 Common - hypothetical protein ebA5146 21 None None None 56476130 Common hisH imidazole glycerol phosphate synthase subunit HisH ebA1295 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 56477754 Common rplI 50S ribosomal protein L9 ebA4078 207 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 56478400 Common - conserved hypothetical protein, predicted nucleic acid-binding protein,contains PINc domain ebB182 7 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56479099 Common iscS cysteine desulfurase involved in Fe-S cluster formation ebA6401 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 56479426 Common - hypothetical protein ebD124 11 None None None 56479071 Common - putative endonuclease ebA6362 28 COG1715 Mrr, Restriction endonuclease Defense mechanisms 56478085 Common - hypothetical protein ebB160 6 None None None 56479070 Common - hypothetical protein ebA6357 24 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 56476744 Common ebdA alpha-subunit of ethylbenzene dehydrogenase c1A65 165 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 56477811 Common - putative transferase ebA4197 109 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 56476559 Common - two component sensor regulator ebA2023 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56477250 Common tnp29 transposase ebA3222 57 None None None 56478278 Common arsD arsenate resistance operon, repressor ArsD ebA4999 31 None None None 56479210 Nonpathogen - hypothetical protein ebA6597 1 None None None 56479253 Common dinG ATP-dependent DNA helicase-related protein ebA6678 138 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 56475519 Common - hypothetical protein, probable membrane protein subunit of cytochrome c oxidase ebA154 19 COG3336 COG3336, Predicted membrane protein Function unknown 56476585 Common - conserved hypothetical protein, predicted NnrS family ebA2079 55 COG3213 NnrS, Uncharacterized protein involved in response to NO Inorganic ion transport and metabolism 56476305 Common - probable rotamase ebA1594 152 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56478639 Common padB2 molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase ebA5622 141 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 56478873 Common - hypothetical protein ebA6021 77 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 56477104 Common topB2 DNA topoisomerase III ebA2963 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 56479273 Nonpathogen - hypothetical protein ebA6706 1 None None None 56476056 Common prfA peptide chain release factor 1 ebA1177 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 56478708 Common - putative transporter ebA5763 105 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 56477942 Common dfrA dihydrofolate reductase ebA4414 147 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 56477429 Common actP acetate permease ebA3537 167 COG4147 DhlC, Predicted symporter General function prediction only 56478676 Common - CoA ligase, AMP generating (three fragments in different reading frames) ebA5705 226 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476439 Common - probable outer membrane protein ebA1847 107 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56479385 Common - hypothetical protein ebA6926 59 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56477794 Common ocd ornithine cyclodeaminase ebA4164 97 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 56478963 Common - predicted protein involved in catabolism of external DNA ebA6174 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 56475743 Common - putative Zn-containing alcohol dehydrogenase fragment ebD27 35 None None None 56478999 Common - hypothetical protein ebA6232 137 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 56478857 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase ebA5994 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 56476221 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase ebA1436 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 56478507 Common - probable cytosine/adenosine deaminase ebA5406 218 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 56478339 Common fimU fimbrial protein pilin similar to FimU ebA5112 4 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 56476363 Nonpathogen - hypothetical protein ebA1715 1 None None None 56479347 Nonpathogen - hypothetical protein ebA6843 1 None None None 56475773 Common - hypothetical protein ebA651 17 None None None 56479087 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase ebA6386 140 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 56478107 Common - hypothetical protein ebA4727 9 None None None 56477420 Common ccmE cytochrome c-type biogenesis protein CcmE ebB113 96 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 56478557 Common - phage related protein (head-tail adaptor) ebA5483 3 COG5614 COG5614, Bacteriophage head-tail adaptor General function prediction only 56478641 Common padX2 probable membrane anchor for molybdopterin oxidoreductase PadBC2 ebA5631 28 COG3301 NrfD, Formate-dependent nitrite reductase, membrane component Inorganic ion transport and metabolism 56478752 Common fadH 2,4-dienoyl-CoA reductase ebA5836 180 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 56479280 Common - hypothetical protein ebA6718 32 COG5654 COG5654, Uncharacterized conserved protein Function unknown 56478373 Common - hypothetical protein ebA5167 18 None None None 56475697 Nonpathogen - hypothetical protein ebA516 1 None None None 56479295 Common tnpF18 transposase fragment ebA6746 3 None None None 56477191 Nonpathogen - hypothetical protein ebA3131 29 COG1339 COG1339, Transcriptional regulator of a riboflavin/FAD biosynthetic operon Transcription / Coenzyme metabolism 56476604 Common - putative ABC transporter, permease protein ebA2114 132 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 56476521 Common - hypothetical protein ebA1965 190 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56476217 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein ebA1431 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 56478762 Nonpathogen - hypothetical protein ebA5851 1 None None None 56476935 Common istB transposition helper protein ebA2666 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477571 Common dedA DedA protein (DSG-1 protein) ebA3787 141 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 56479284 Common tauA predicted ABC-type nitrate/sulfonate/bicarbonate transport system protein ebA6727 86 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 56477606 Common rplE 50S ribosomal protein L5 ebA3839 248 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 56476460 Common - hypothetical protein ebA1881 77 COG0433 COG0433, Predicted ATPase General function prediction only 56478275 Common DCTP dicarboxylate transporter ebA4994 87 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 56478783 Nonpathogen - hypothetical protein ebA5880 1 None None None 56477562 Nonpathogen - hypothetical protein ebA3773 1 None None None 56477527 Common - hypothetical protein, probable pilus-associated lipoprotein ebA3712 8 None None None 56479046 Common - conserved hypothetical protein, predicted peptidase ebA6315 59 COG3975 COG3975, Predicted protease with the C-terminal PDZ domain General function prediction only 56479503 Common - hypothetical protein ebA7171 128 COG0795 COG0795, Predicted permeases General function prediction only 56477407 Common rpoZ DNA-directed RNA polymerase omega chain ebA3495 113 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 56475578 Common - helicase (putative RNA helicase), fragment ebA275 94 COG1205 COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster General function prediction only 56478935 Common gcvT glycine cleavage system aminomethyltransferase T ebA6126 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 56478798 Nonpathogen - conserved hypothetical protein, antitoxin of prevent-host-death family ebB204 3 None None None 56478142 Common purF amidophosphoribosyltransferase ebA4783 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 56477777 Common - putative glutamyl-tRNA synthetase-related protein ebA4133 233 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 56478368 Common copZ predicted copper chaperone ebB181 141 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 56479559 Nonpathogen - hypothetical protein ebA7273 1 None None None 161350048 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha ebA4148 199 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 56476485 Common bbsF subunit of Benzylsuccinate CoA-transferase c2A311 111 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56479080 Common - 5'-methylthioadenosine phosphorylase ebA6375 153 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 56478270 Common - hypothetical protein ebA4979 168 COG0282 ackA, Acetate kinase Energy production and conversion 56479413 Common - putative oxidoreductase (related to short-chain alcohol dehydrogenase) ebA6991 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56479095 Common hscA chaperone protein HscA ebA6396 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56477619 Common rpoA DNA-directed RNA polymerase subunit alpha ebA3853 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 56477720 Common cobB cobyrinic acid a,c-diamide synthase ebA4027 138 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 56479100 Common iscS1 putative cysteine desulfurase involved in Fe-S cluster formation ebA6402 234 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 56476636 Common - outer membrane efflux protein ebA2169 27 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56477434 Common paaH 3-hydroxybutyryl-CoA dehydrogenase ebA3543 161 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56476660 Common - hypothetical protein ebA2214 39 None None None 56476163 Common miaB 2-methylthioadenine synthetase ebA1339 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 56475506 Common aceF dihydrolipoamide acetyltransferase ebA135 196 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 56479547 Nonpathogen - hypothetical protein ebA7253 1 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 56478133 Nonpathogen - hypothetical protein ebA4769 1 None None None 56478689 Common paaZ2 hypothetical protein ebA5726 195 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56476995 Common phbP related to granule-associated proteins (phasins) ebA2771 16 COG5490 COG5490, Uncharacterized conserved protein Function unknown 56477201 Common pdeR phenol-degradation regulator ebA3145 172 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 56478984 Common cysA ATP-binding protein of thiosulfate ABC transporter ebA6208 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 56478219 Common aat leucyl/phenylalanyl-tRNA--protein transferase ebA4891 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 56479183 Common - radical SAM enzyme of unknown function ebA6553 92 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 56478196 Common - putative hydrolase, alpha/beta hydrolase fold family ebA4860 130 COG2267 PldB, Lysophospholipase Lipid metabolism 56476895 Common - hypothetical protein ebA2596 93 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 56478990 Common - probable membrane-associated methyl-accepting chemotaxis protein with HAMP domain ebA6216 71 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 56476677 Common ackA putative acetate kinase ebA2248 162 COG0282 ackA, Acetate kinase Energy production and conversion 56478758 Common rpsO 30S ribosomal protein S15 ebA5844 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 56475684 Common int phage-related integrase ebA493 160 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56475861 Common - predicted permease ebA816 50 COG0730 COG0730, Predicted permeases General function prediction only 56479561 Nonpathogen - hypothetical protein ebA7281 2 None None None 56478353 Common ccoP cytochrome-cbb3 oxidase, subunit III ebA5134 84 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56477145 Common gatA glutamyl-tRNA(Gln) amidotransferase subunit A ebA3030 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 56479147 Nonpathogen - hypothetical protein ebA6496 1 None None None 56477969 Nonpathogen - hypothetical protein ebA4471 1 None None None 56477683 Common - nucleotide-binding protein implicated in inhibition of septum formation ebA3966 197 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 56478631 Common - transcriptional regulator, LysR family ebA5610 188 COG0583 LysR, Transcriptional regulator Transcription 56477110 Nonpathogen - hypothetical protein ebA2972 1 None None None 56475480 Common tnp3 transposase (IS4) ebA84 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56477202 Common - conserved hypothetical protein, predicted Pyridoxamine 5'-phosphate oxidase family ebA3146 11 COG3787 COG3787, Uncharacterized protein conserved in bacteria Function unknown 56476286 Nonpathogen - hypothetical protein ebA1551 1 None None None 56478620 Common - hypothetical protein ebA5591 21 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 56477829 Common - hypothetical protein ebA4232 8 None None None 56479028 Common narX nitrate/nitrite sensor kinase ebA6280 148 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 56478570 Nonpathogen - hypothetical protein ebA5504 1 None None None 56479141 Common radA DNA repair protein RadA ebA6481 210 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 56476759 Common apc4 possible subunit of acetophenone carboxylase c1A100 93 COG0146 HyuB, N-methylhydantoinase B/acetone carboxylase, alpha subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56477408 Common spoT guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ebA3497 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 56478118 Common trxA thioredoxin ebB161 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 56478865 Common rnhB ribonuclease HII ebA6003 238 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 56478757 Common truB tRNA pseudouridine 55 synthase ebA5843 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 56475914 Nonpathogen - hypothetical protein ebB28 4 None None None 56478150 Common gdhA putative NAD-specific glutamate dehydrogenase encoded in antisense gene pair with dnaKJ ebB165 7 None None None 56478955 Common pyrG CTP synthetase ebA6159 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 56476766 Nonpathogen - hypothetical protein ebA2387 1 None None None 56475705 Common - hypothetical protein ebA529 5 None None None 56477854 Nonpathogen - hypothetical protein ebA4269 2 None None None 56478893 Common - probable response regulator ebA6058 183 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 56479409 Common - hypothetical protein, predicted Glutamate--cysteine ligase ebA6981 13 COG2170 COG2170, Uncharacterized conserved protein Function unknown 56477591 Common fusA elongation factor G ebA3824 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 56476815 Common - hypothetical protein ebB76 13 None None None 56475542 Common - iron-sulfur cluster-binding protein ebA186 43 COG0348 NapH, Polyferredoxin Energy production and conversion 56477363 Common - hypothetical protein ebA3408 5 None None None 56476145 Common - putative ATP-binding ABC transporter protein ebA1313 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 56476401 Nonpathogen - hypothetical protein ebA1777 1 None None None 56475807 Common - hypothetical protein ebA733 14 COG4665 FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component Secondary metabolites biosynthesis, transport, and catabolism 56475812 Common bcrA benzoyl CoA reductase subunit ebA742 63 COG1924 COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Lipid metabolism 56479414 Common - hypothetical protein, INTERPRO-suggestion: probable Ferritin-like ebA6994 4 None None None 56477027 Common - hypothetical protein ebA2834 95 COG0730 COG0730, Predicted permeases General function prediction only 56477175 Common - hypothetical protein ebA3087 77 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 56476800 Common - hypothetical protein ebA2428 21 None None None 56479035 Common - hypothetical protein ebA6291 19 None None None 56477528 Common cpaC probable outer membrane channel protein, probably involved in pilus assembly ebA3713 140 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 56478451 Common - putative ABC-transporter ebA5304 156 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 56478533 Common rluC ribosomal large subunit pseudouridine synthase C ebA5443 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 56476472 Nonpathogen bssB beta-Subunit of benzylsuccinate synthase c2A305 2 None None None 56478716 Common xccC biotin carboxylase subunit of unknown acetyl-CoA carboxylase-like enzyme ebA5774 234 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 56476666 Common qhpC quinohemoprotein amine dehydrogenase gamma subunit ebC14 5 None None None 56476714 Common - conserved hypothetical protein, predicted prevent-host-death family protein ebA2310 17 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 56478276 Common arsR transcriptional regulator, ArsR family ebB173 77 COG0640 ArsR, Predicted transcriptional regulators Transcription 56478778 Common wbpP WbpP ebA5873 234 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56476709 Common wrbA TrpR binding protein WrbA ebA2303 120 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 56478828 Nonpathogen - hypothetical protein ebA5953 1 None None None 56477401 Common - hypothetical protein ebA3480 107 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56479360 Common - predicted regulator of plasmid copy number ebA6875 14 COG3905 COG3905, Predicted transcriptional regulator Transcription 56477953 Common fkpB FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase ebB150 125 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 56476700 Nonpathogen - conserved hypothetical protein fragment ebD60 6 None None None 56476230 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase ebA1448 210 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 56477233 Common - putative Oxidoreductase, FAD-binding ebA3193 102 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 56477266 Common prfC peptide chain release factor 3 (RF-3) ebA3251 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 56478417 Common - predicted S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase ebA5251 31 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 56475448 Common - conserved hypothetical protein, potential lytic transglycosylase ebA33 152 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56478077 Common - glutathione S-transferase family protein ebA4663 83 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56475751 Common ctpC putative cation transport ATPase ebA609 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 56478821 Common tnpF17 hypothetical protein ebA5945 22 None None None 56476514 Common badI 2-ketocyclohexanecarboxyl-CoA hydrolase ebA1954 176 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 56478407 Common - hypothetical protein ebA5236 4 COG4637 COG4637, Predicted ATPase General function prediction only 56475671 Common - hypothetical protein ebA463 13 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 56476671 Nonpathogen - hypothetical protein ebA2239 3 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 56479150 Common ispZ intracellular septation protein A ebA6501 85 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 56478113 Common - radical SAM protein similar to MiaB ebA4733 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 56478473 Common istB transposition helper protein ebA5341 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476923 Common - hypothetical protein ebA2640 11 None None None 56477880 Nonpathogen - hypothetical protein ebA4313 3 None None None 56478797 Common - putative nucleoside-diphosphate sugar epimerase ebA5907 149 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56478074 Common - putative acyl-CoA carboxylase alpha chain protein ebA4659 230 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 56479017 Nonpathogen - hypothetical protein ebA6263 1 None None None 56478034 Common korA 2-ketoglutarate: NADP oxidoreductase, alpha subunit ebA4588 111 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 56478304 Common - putative transcriptional regulator,lysR family ebA5056 189 COG0583 LysR, Transcriptional regulator Transcription 56477079 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA ebA2915 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 56477304 Common - predicted PAP2 superfamily protein ebA3314 24 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 56478482 Common - hypothetical protein ebB188 15 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 56479266 Nonpathogen - hypothetical protein ebA6694 1 None None None 56479222 Common trbC hypothetical protein ebA6624 22 None None None 56477701 Common waaP lipopolysaccharide core biosynthesis protein WaaP ebA3995 10 None None None 56478582 Nonpathogen - hypothetical protein ebA5528 1 None None None 56476643 Common - putative response regulator ebA2183 120 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 56477743 Common - HlyD family secretion protein ebA4062 140 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56479163 Common - periplasmic component of probable ABC-type transport system involved in resistance to organic solvents ebA6521 76 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 56478810 Nonpathogen - hypothetical protein ebA5929 1 None None None 56475875 Common dfp bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase ebA838 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 56476803 Common - hypothetical protein ebB75 15 None None None 56477470 Common modA1 predicted Periplasmic molybdate-binding protein/domain ebA3600 55 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 56478015 Common - hypothetical protein ebA4552 12 None None None 56475491 Common - hypothetical protein ebB4 30 COG4679 COG4679, Phage-related protein Function unknown 56478598 Nonpathogen - hypothetical protein ebA5552 1 None None None 56475729 Nonpathogen - hypothetical protein ebA567 1 None None None 56476095 Common - probable secretion protein ebB36 67 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56475948 Nonpathogen - hypothetical protein ebA968 1 None None None 56478435 Nonpathogen - hypothetical protein ebA5280 1 None None None 56479065 Nonpathogen - hypothetical protein ebA6348 1 None None None 56477935 Nonpathogen - hypothetical protein ebA4401 1 None None None 56477225 Nonpathogen - hypothetical protein ebA3181 1 None None None 56478487 Common intF integrase fragment ebB189 11 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56475949 Common tldD Zn-dependent peptidase, potential modulator of DNA gyrase ebA969 169 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 56477713 Common cobU cobinamide kinase ebA4011 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 56477734 Common - predicted Fe-S oxidoreductase ebA4050 163 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 56476745 Common - hypothetical protein c1A68 13 None None None 56477627 Common - putative aminotransferase ebA3862 230 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 56478047 Common CBU1499 hypothetical protein ebA4606 23 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 56477292 Common - transcriptional regulatory protein ebA3295 98 COG1414 IclR, Transcriptional regulator Transcription 56478319 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase ebA5086 138 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 56477588 Common rpoC DNA-directed RNA polymerase subunit beta' ebA3819 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 56475859 Common lysR transcription regulator protein ebA811 122 COG0583 LysR, Transcriptional regulator Transcription 56478208 Common cytC2 cytochrome c, class IC ebA4874 58 COG2863 COG2863, Cytochrome c553 Energy production and conversion 56478247 Common revT1 retron-type reverse transcriptase, C-terminal half ebA4941 43 None None None 56476322 Common - glycosyl transferase ebA1625 100 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56477368 Common - predicted membrane carboxypeptidase (penicillin-binding protein) ebA3423 15 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 56476020 Common - hypothetical protein ebA1114 50 COG3222 COG3222, Uncharacterized protein conserved in bacteria Function unknown 56478029 Common nnrR nnr-like transcriptional regulator, Crp family ebA4580 106 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56479454 Nonpathogen - putative outer membrane protein ebD127 7 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 56478041 Nonpathogen - hypothetical protein ebB156 1 None None None 56475613 Common - putative cell-cycle regulation histidine triad protein ebA342 117 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 56478289 Common - transcriptional regulatory protein,lysR family ebA5018 141 COG0583 LysR, Transcriptional regulator Transcription 56475899 Common msrA putative peptide methionine sulfoxide reductase msrA ebA872 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 56478332 Common - nucleotide-binding protein ebA5101 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 56477073 Common spoOJ ParB-like partition protein ebA2907 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 56479430 Common - recombination factor protein RarA ebA7036 227 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 56476596 Nonpathogen - hypothetical protein ebA2101 1 None None None 56477214 Nonpathogen pchX hypothetical protein ebA3164 3 None None None 56477838 Nonpathogen - long-chain N-acyl amino acid synthase ebA4246 7 None None None 56479208 Common - transglycosylase SLT domain protein ebA6594 36 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 56479335 Common - hypothetical protein ebA6822 34 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56476395 Common pilT twitching mobility protein PilT ebA1770 218 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 56476888 Common rnfD electron transport complex protein rnfD (Nitrogen fixation protein rnfD) ebA2578 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 56475846 Common - probable complex regulator protein containing response regulator receiver and signal transduction histidine kinase domains ebA791 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56475793 Common motC flagellar motor protein ebA697 115 COG1291 MotA, Flagellar motor component Cell motility and secretion 56478889 Common - putative signal transducer protein with histidine kinase domain ebA6041 182 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56475830 Nonpathogen - hypothetical protein ebA768 2 None None None 56476830 Common - hypothetical protein ebA2470 14 None None None 56479242 Common oppA oligopeptide-binding protein oppA precursor ebA6662 163 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 56477343 Common - predicted hydrolase or acyltransferase ebA3373 49 COG2267 PldB, Lysophospholipase Lipid metabolism 56476351 Common - hypothetical protein ebB47 18 None None None 56479373 Common - hypothetical protein ebA6904 27 COG2323 COG2323, Predicted membrane protein Function unknown 56475570 Common tnp5 transposase, is4 family ebA261 28 None None None 56475527 Common - protein containing response regulator domain, but no DNA binding domain ebA168 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478065 Common chrA conserved hypothetical protein, similar to subunit of chromate transporter ebA4644 78 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 56478565 Common istB transposition helper protein ebB194 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477325 Common istA transposase ebA3344 133 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475837 Common mltB membrane-bound lytic transglycosylase ebA776 101 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 56477849 Common asnB amidotransferase class-II, similar to asparagine synthase (glutamine-hydrolyzing) ebA4263 162 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 56476916 Nonpathogen - hypothetical protein ebA2631 1 None None None 56476173 Nonpathogen - hypothetical protein ebA1358 1 None None None 56477928 Common maeB1 malic enzyme ebA4392 217 COG0281 SfcA, Malic enzyme Energy production and conversion 56479437 Common nadE NAD synthetase ebA7049 229 COG0171 NadE, NAD synthase Coenzyme metabolism 56475498 Common purE phosphoribosylaminoimidazole carboxylase catalytic subunit ebA116 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 56475548 Common istA transposase ebA200 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475843 Common istA transposase ebA787 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477609 Common rplF 50S ribosomal protein L6 ebA3841 243 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 56478521 Common - hypothetical protein ebA5429 138 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 56478905 Common - hypothetical protein ebB215 11 None None None 56476016 Common pykA pyruvate kinase ebA1105 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 56476797 Common - hypothetical protein ebA2424 43 None None None 56477257 Nonpathogen - hypothetical protein ebA3233 1 None None None 56477445 Common - putative branched-chain amino acid transport system permease protein ebA3558 131 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 56477647 Common pilR response regulator PilR ebA3894 197 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56477980 Common - putative sulfate transporter ebA4484 157 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 56477060 Common ccoO cytochrome oxidase, cytochrome c subunit ebA2882 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 56477128 Common atpE F0F1 ATP synthase subunit C ebA3000 67 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 56477769 Common - hypothetical protein ebA4118 7 None None None 56476410 Common - hypothetical protein ebB52 13 None None None 56476592 Common - hypothetical protein ebA2092 141 COG1703 ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family Amino acid transport and metabolism 56475887 Common istA transposase ebA859 55 None None None 56477416 Common ccmA heme exporter protein A ebA3514 248 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 56478725 Common ebdB2 ethylbenzene dehydrogenase, beta subunit ebA5791 156 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 56478732 Common - hypothetical protein ebA5805 82 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 56478973 Common - putative aldehyde dehydrogenase ebA6190 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56476194 Common - hypothetical protein ebA1400 30 COG1160 COG1160, Predicted GTPases General function prediction only 56477673 Common htrB lipid A biosynthesis lauroyl acyltransferase ebA3949 96 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 56477966 Common - hypothetical protein ebA4464 25 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 56476721 Common fadB alpha-subunit of fatty acid oxidation complex c1A208 162 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56477865 Common - conserved hypothetical protein, possibly glycosyltransferase ebA4292 76 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56475939 Common - hypothetical protein ebA945 14 None None None 56476331 Common tolC type I secretion outer membrane efflux protein ebA1642 124 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 56475878 Common rpmA 50S ribosomal protein L27 ebC2 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 56475654 Common - hypothetical protein ebA419 22 None None None 56476695 Common rmlB putative dTDP-D-glucose 4, 6-dehydratase ebA2278 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 56479249 Common moaD molybdopterin (MPT) converting factor,subunit 1 ebA6672 80 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 56476299 Common - hypothetical protein ebA1578 18 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476524 Common acrB acriflavine resistance protein B ebA1972 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 56479543 Common - hypothetical protein ebA7242 10 None None None 56477960 Common murI glutamate racemase ebA4456 189 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 56476863 Common vapI putative plasmid maintenance system antidote protein VapI-containing a helix-turn-helix motif ebB82 76 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 56476901 Common - DNA-binding protein ebA2608 61 COG3943 COG3943, Virulence protein General function prediction only 56478805 Nonpathogen - hypothetical protein ebA5920 1 None None None 56478053 Common hfi putative hydroxypyruvate isomerase protein ebA4617 84 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 56476851 Common - hypothetical protein ebB79 11 None None None 56478223 Nonpathogen - hypothetical protein ebA4895 1 None None None 56477064 Common - hypothetical protein ebA2889 63 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 56477049 Common - hypothetical protein ebA2863 3 None None None 56477662 Common hlyD predicted secretion protein HlyD ebA3924 151 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 56477753 Common rpsR 30S ribosomal protein S18 ebB142 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 56478446 Common had probable 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase ebA5297 197 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 56475552 Common - hypothetical protein ebA210 40 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 56476632 Common - predicted proteasome-type protease ebA2159 54 COG3484 COG3484, Predicted proteasome-type protease Posttranslational modification, protein turnover, chaperones 56478977 Common - GTP-binding protein ebA6197 110 COG1161 COG1161, Predicted GTPases General function prediction only 56477239 Common tnp28 transposase, IS5 family ebA3199 47 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56479402 Common - hypothetical protein ebA6963 36 COG0628 PerM, Predicted permease General function prediction only 56476874 Common - putative glutamate-cysteine ligase ebA2547 27 None None None 56477553 Common - putative death-on-curing family protein ebA3754 66 COG3943 COG3943, Virulence protein General function prediction only 56478062 Common cioB cyanide insensitive terminal oxidase ebA4638 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 56478989 Common - hypothetical protein ebA6215 161 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 56476639 Nonpathogen - hypothetical protein ebA2178 3 None None None 56478328 Common argF ornithine carbamoyltransferase ebA5096 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 56477555 Common - sensory box histidine kinase/response regulator,C-terminal part ebA3758 201 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56478321 Common pfkA 6-phosphofructokinase ebA5088 130 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 56475583 Common istA transposase ebA290 53 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477461 Common nodI nod factor export ATP-binding protein I ebA3580 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 56477602 Common rpmC 50S ribosomal protein L29 ebC3 145 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 56477190 Common - predicted ADP-ribose pyrophosphatase ebA3130 76 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56476094 Common - general secretion pathway gspG related transmembrane protein ebA1241 13 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56475475 Common istA transposase ebA72 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478629 Nonpathogen - hypothetical protein ebD96 1 None None None 56478101 Nonpathogen - hypothetical protein ebA4720 1 None None None 56477172 Common - hypothetical protein ebA3079 50 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 56476349 Common - hypothetical protein ebA1688 103 COG1262 COG1262, Uncharacterized conserved protein Function unknown 56477997 Common rpoE RNA polymerase sigma factor (sigma24) ebA4517 173 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 56477023 Common - response regulator receiver protein with helix-turn-helix domain ebA2828 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56476035 Common ostA organic solvent tolerance transmembrane protein ebA1141 117 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 56477612 Common rpmD 50S ribosomal protein L30 ebC4 140 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 56475642 Common - hypothetical protein ebA400 38 None None None 56478259 Common - hypothetical protein ebA4962 211 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 56476458 Common cueO predicted multicopper oxidase ebA1878 29 COG4454 COG4454, Uncharacterized copper-binding protein Inorganic ion transport and metabolism 56476889 Common rnfG electron transport complex protein rnfG (Nitrogen fixation protein rnfG ebA2581 59 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 56477437 Common paaA putative ring-oxidation complex protein 1 ebA3547 46 COG3396 COG3396, Uncharacterized conserved protein Function unknown 56477596 Common rplW 50S ribosomal protein L23 ebB125 201 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 56479538 Common - phage-related lysozyme ebA7232 17 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 56478138 Common accD putative acetyl-coenzyme A carboxylase carboxyl transferase (Subunit beta) protein ebA4778 204 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 56477281 Nonpathogen - hypothetical protein ebA3280 1 None None None 56476992 Common boxA benzoyl-CoA oxygenase component A ebA2766 124 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 56476429 Common - hypothetical protein ebA1833 12 None None None 56478647 Common - acyl-CoA transferase, family III ebA5643 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56477444 Common - putative amino-acid-binding periplasmic (PBP) ABC transporter protein ebA3556 122 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56477814 Common trpD anthranilate phosphoribosyltransferase ebA4200 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 56477632 Common acrA AcrA/AcrE family putative membrane-fusion protein ebA3872 147 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56476243 Common - hypothetical protein ebA1467 25 None None None 56478657 Common ferA organic acid-CoA ligase (ADP forming) similar to feruloyl-CoA synthetase ebA5667 143 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 56477842 Nonpathogen - hypothetical protein ebA4252 10 None None None 56477153 Common - putative penicillin-binding protein ebA3044 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 56478224 Nonpathogen - hypothetical protein ebA4898 1 None None None 56478733 Common - hypothetical protein ebA5807 131 COG1704 LemA, Uncharacterized conserved protein Function unknown 56478499 Common padE phenylglyoxylate:acceptor oxidoreductase ebA5397 78 COG1014 PorG, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit Energy production and conversion 56476067 Common sspB ClpXP protease specificity-enhancing factor ebA1194 64 COG2969 SspB, Stringent starvation protein B General function prediction only 56479006 Common - hypothetical protein ebA6243 15 None None None 56476610 Common istB transposition helper protein ebA2123 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476674 Common glmS glutamine amidotransferase class-II ebA2244 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 56476251 Common - hypothetical protein ebA1479 13 COG5397 COG5397, Uncharacterized conserved protein Function unknown 56479553 Common - putative lysozyme ebA7267 33 COG3179 COG3179, Predicted chitinase General function prediction only 56476289 Common tnp18 transposase, IS5 family ebA1557 49 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 56478936 Common - predicted metal-dependent phosphoesterase (PHP family) ebA6127 133 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 56476248 Common prmA ribosomal protein L11 methyltransferase ebA1475 177 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 56477745 Common - hypothetical protein ebA4066 58 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56477468 Common - putative protease ebA3595 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 56475510 Nonpathogen - hypothetical protein ebA139 1 None None None 56477285 Common - predicted RecB family exonuclease protein ebA3284 55 COG1468 COG1468, RecB family exonuclease DNA replication, recombination, and repair 56477801 Common trxC putative thioredoxin ebA4178 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 56478094 Common - hypothetical protein ebA4705 52 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 56476898 Nonpathogen - hypothetical protein ebA2602 1 None None None 56476620 Nonpathogen - hypothetical protein ebD57 1 None None None 56477563 Common - predicted nucleic acid-binding protein,contains PIN domain ebA3774 18 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56476330 Common kdtA 3-deoxy-D-manno-octulosonic-acid transferase ebA1636 125 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 56479176 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ebA6542 171 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 56476627 Common - probable regulator protein containing CheR-and CheB-like domains ebA2146 153 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 56478329 Common argG argininosuccinate synthase ebA5097 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 56477580 Common tuf elongation factor Tu ebA3808 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 56476452 Common - putative regulatory protein ebA1869 32 COG0348 NapH, Polyferredoxin Energy production and conversion 56478842 Common - antitoxin of toxin-antitoxin stability system ebA5970 12 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 56475957 Nonpathogen - hypothetical protein ebA988 2 None None None 56478272 Common - hypothetical protein ebA4983 8 None None None 56476068 Common sspA stringent starvation protein a ebA1195 95 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56475781 Common - helicase (Snf2 family) ebA666 165 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 56478996 Common - hypothetical protein ebA6228 5 None None None 56476337 Nonpathogen - hypothetical protein ebA1658 1 None None None 56478141 Common cvpA colicin V production protein ebB164 47 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 56476942 Nonpathogen - hypothetical protein ebA2675 1 None None None 56478959 Common - probable lipoprotein ebA6165 128 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 56479120 Common atoC acetoacetate metabolism regulatory protein atoC ebA6441 209 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56476964 Common modA molybdate ABC transporter, periplasmic molybdate-binding protein ebA2721 132 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 56477032 Common rnpA ribonuclease P protein component ebB90 28 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 56475894 Common pheS phenylalanyl-tRNA synthetase subunit alpha ebA868 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 56476218 Common secA preprotein translocase subunit SecA ebA1433 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 56475482 Nonpathogen - hypothetical protein ebA89 2 None None None 56475822 Common - hypothetical protein ebA757 2 None None None 56475503 Common - two-component sensor kinase ebA126 221 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56479038 Common - predicted flavoprotein ebA6296 134 COG2081 COG2081, Predicted flavoproteins General function prediction only 56476048 Common ppc phosphoenolpyruvate carboxylase ebA1167 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 56476261 Common - conserved hypothetical protein, predicted archaeal ATPase family ebA1504 25 COG1672 COG1672, Predicted ATPase (AAA+ superfamily) General function prediction only 56479255 Common - predicted ATPase ebA6682 101 COG1485 COG1485, Predicted ATPase General function prediction only 56478508 Common - hypothetical protein ebA5408 50 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 56476432 Common bfd bacterioferritin-associated ferredoxin ebD41 41 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 56477068 Common - hypothetical protein ebA2897 86 COG1432 COG1432, Uncharacterized conserved protein Function unknown 56479418 Common - alpha-amylase family protein ebA7002 78 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 56477166 Common - probable cytochrome c5 ebA3067 45 COG3245 CycB, Cytochrome c5 Energy production and conversion 56478844 Nonpathogen - hypothetical protein ebA5973 1 None None None 56476719 Common fadL long chain fatty acid transport protein c1A203 86 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 56476846 Common - hypothetical protein ebA2502 10 COG4861 COG4861, Uncharacterized protein conserved in bacteria Function unknown 56478372 Common - hypothetical protein ebA5166 20 None None None 56479349 Common - DNA-binding response regulator, LuxR family ebA6850 216 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56477791 Common dctP C4-dicarboxylate-binding periplasmic protein ebA4158 101 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 56476613 Nonpathogen - hypothetical protein ebA2126 1 None None None 56479311 Common acnA aconitate hydratase ebA6773 222 COG1048 AcnA, Aconitase A Energy production and conversion 56476398 Common - hypothetical protein ebA1774 96 COG1981 COG1981, Predicted membrane protein Function unknown 56477037 Nonpathogen - hypothetical protein ebA2849 1 None None None 56476013 Common tktA transketolase ebA1101 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 56477105 Common norW flavorubredoxin reductase (nitric oxide reductase) reductase ebA2965 139 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 56475852 Nonpathogen - hypothetical protein ebD32 2 None None None 56479098 Common iscU scaffold protein ebA6400 150 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 56476468 Common tdiS/tcs3 two-component sensor c2A301 209 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56476547 Common - GCN5-related N-acetyltransferase ebB62 22 COG2153 ElaA, Predicted acyltransferase General function prediction only 56478179 Common nuoD NADH dehydrogenase subunit D ebA4837 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 56478838 Common - GCN5-related N-acetyltransferase ebA5964 46 COG0456 RimI, Acetyltransferases General function prediction only 56476966 Common recB ATP-dependent exoDNAse beta subunit ebA2723 186 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 56476601 Common - putative iron transport system ATP-binding protein ebA2111 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 56478279 Common arsA arsenical pump-driving ATPase ebA5000 93 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 56476266 Nonpathogen - hypothetical protein ebA1515 1 None None None 56478414 Nonpathogen - hypothetical protein containing the PIWI domain ebA5244 5 COG1431 COG1431, Uncharacterized protein containing piwi/argonaute domain Translation, ribosomal structure and biogenesis 56478607 Common - putative carboxypeptidase ebA5565 16 None None None 56476741 Nonpathogen ebdD delta-subunit of ethylbenzene dehydrogenase c1A60 8 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 56477725 Common - mechanosensitive ion channel family protein ebA4035 214 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56478401 Common - hypothetical protein ebD91 7 None None None 56478552 Common - hypothetical protein ebA5471 15 None None None 56475520 Common coxA putative cytochrome c oxidase subunit I ebA156 175 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 56477124 Common gabD succinate-semialdehyde dehydrogenase ebA2996 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56476371 Common - methyltransferase ebA1729 154 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56477109 Common uvrA2 hypothetical protein ebA2970 231 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 56478765 Common - probable ATP-dependent DNA helicase ebA5855 70 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 56479019 Common nosL putative lipoprotein ebA6265 32 COG4314 NosL, Predicted lipoprotein involved in nitrous oxide reduction Energy production and conversion 56478904 Common - predicted glucose/sorbosone dehydrogenase ebA6077 124 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 56475983 Common - hypothetical protein ebA1044 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 56478455 Common benK benzoate MFS transporter ebA5311 197 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56476438 Common - transmembrane ATP-binding ABC transporter protein ebA1848 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 56475635 Common istA transposase ebA385 60 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476760 Common apc3 possible subunit of acetophenone carboxylase c1A102 117 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56478753 Common - hypothetical protein ebA5838 165 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 56478869 Common bioC probable biotin synthesis protein ebA6013 137 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56477307 Common colR DNA-binding response regulator ColR ebA3319 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478876 Common - hypothetical protein ebB212 9 COG4634 COG4634, Uncharacterized protein conserved in bacteria Function unknown 56475737 Common glk glucokinase ebA584 90 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 56479392 Common gtrB glycosyl transferase ebA6942 200 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56479428 Common serS seryl-tRNA synthetase ebA7034 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 56478660 Common - putative dehydrogenase (Short chain alcohol dehydrogenase) ebA5670 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56475925 Common pheA chorismate mutase/prephenate dehydratase ebA906 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 56476911 Common cysH phosphoadenosine phosphosulfate reductase ebA2623 158 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 56476106 Common engA GTP-binding protein EngA ebA1256 235 COG1160 COG1160, Predicted GTPases General function prediction only 56476682 Common aroK putative shikimate kinase I protein ebA2258 197 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 56478578 Nonpathogen - hypothetical protein ebA5517 1 None None None 56475759 Common - hypothetical protein ebA625 38 COG4748 COG4748, Uncharacterized conserved protein Function unknown 56477761 Common - hypothetical protein ebA4104 44 COG4582 COG4582, Uncharacterized protein conserved in bacteria Function unknown 56476081 Common nirD assimilatory nitrite reductase, small subunit ebA1215 76 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 56478809 Common - hypothetical protein ebA5926 27 None None None 56475656 Nonpathogen - hypothetical protein ebA425 1 None None None 56478515 Common pilZ type IV fimbrial biogenesis protein PilZ ebB193 33 COG3215 PilZ, Tfp pilus assembly protein PilZ Cell motility and secretion / Intracellular trafficking and secretion 56476855 Common - DNA repair protein similar to radC-family ebA2514 173 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 56479338 Common - predicted aldose 1-epimerase ebA6832 60 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 56478872 Common bioA adenosylmethionine-8-amino-7-oxononanoate transaminase ebA6019 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 56479124 Nonpathogen - hypothetical protein ebA6449 2 None None None 56476077 Common - putative lipolytic enzyme ebA1210 32 COG3240 COG3240, Phospholipase/lecithinase/hemolysin Lipid metabolism / General function prediction only 56476691 Nonpathogen - hypothetical protein ebA2272 2 None None None 56477095 Common - hypothetical protein ebA2947 21 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 56479195 Common - hypothetical protein ebA6575 9 None None None 56476387 Common - holliday junction resolvase ebA1756 95 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 56477692 Common polA DNA polymerase I ebA3982 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 56475883 Nonpathogen - hypothetical protein ebA851 1 None None None 56476899 Common tnp26 transposase ebA2604 29 COG5421 COG5421, Transposase DNA replication, recombination, and repair 56476821 Common - hypothetical protein ebA2461 14 None None None 56476956 Common - hypothetical protein ebA2702 197 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56478518 Common gdhA glutamate dehydrogenase ebA5425 172 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 56478673 Common - hypothetical protein ebB201 5 None None None 56477471 Common - hypothetical protein ebA3601 113 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 56478811 Common istA transposase ebA5932 133 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477952 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase ebA4444 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 56479505 Common - putative cytosolic aminopeptidase ebA7174 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 56477572 Nonpathogen - hypothetical protein ebA3790 1 None None None 56479548 Common - hypothetical protein ebA7259 19 None None None 56477503 Common - Sigma-54 dependent DNA-binding response regulator ebA3662 173 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56477234 Common - hypothetical protein ebA3194 14 COG3656 COG3656, Predicted periplasmic protein Function unknown 56475539 Common - hypothetical protein ebB7 4 None None None 56477708 Common gpmA phosphoglycerate mutase ebA4004 33 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 56478943 Common - conserved hypothetical protein, predicted peptidase M23B family ebA6138 193 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 56478383 Nonpathogen - hypothetical protein ebA5188 3 None None None 56477542 Common - hypothetical protein ebA3739 28 COG2442 COG2442, Uncharacterized conserved protein Function unknown 56478540 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III ebA5455 210 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 56478852 Common tsf elongation factor Ts ebA5987 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 56476293 Common vapL plasmid maintenance system antidote protein ebA1561 79 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 56479320 Nonpathogen - hypothetical protein ebA6791 1 None None None 56476486 Common bbsE subunit of Benzylsuccinate CoA-transferase c2A312 115 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 56476517 Common badJ cyclohexanecarboxyl-CoA dehydrogenase ebA1959 159 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56478666 Common ubiX 3-polyprenyl-4-hydroxybenzoate decarboxylase ebA5680 151 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 56478271 Nonpathogen - hypothetical protein ebA4980 6 COG5403 COG5403, Uncharacterized conserved protein Function unknown 56476162 Common - PhoH-like protein ebA1337 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 56476903 Common hsdS restriction modification system specificity subunit ebA2610 72 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 56478463 Common tnpA transposase (N-terminal fragment) ebA5322 23 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475764 Common istA transposase ebA634 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479134 Common - ATPase component ABC-type dipeptide/oligopeptide/nickel transport system ebA6466 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 56478356 Common RS02795 hypothetical protein ebD128 14 None None None 56475462 Common - hypothetical protein ebD23 21 None None None 56477204 Common korB2 2-oxoglutarate ferredoxin oxidoreductase subunit beta ebA3150 112 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 56478991 Nonpathogen - hypothetical protein ebA6220 1 None None None 56479215 Common traV hypothetical protein ebA6611 8 None None None 56475609 Common - hypothetical protein ebA335 18 None None None 56478163 Common greA transcription elongation factor ebA4816 204 COG0782 GreA, Transcription elongation factor Transcription 56477312 Nonpathogen - hypothetical protein ebA3327 1 None None None 56479293 Common yhiH putative ABC transporter ATP-binding protein yhiH ebA6744 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 56478880 Nonpathogen - hypothetical protein ebA6030 2 None None None 56479375 Common - conserved hypothetical protein, predicted short-chain dehydrogenase/reductase SDR family ebA6908 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 56477511 Common - ComE operon protein 1-related protein ebA3678 110 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 56477489 Common - putative transcription regulator protein, merR family ebA3634 52 COG0789 SoxR, Predicted transcriptional regulators Transcription 56475803 Common - putative MFS transporter ebA725 150 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 56476551 Common tnp12B transposase, fragment ebA2011 15 None None None 56477895 Common - guanyl-specific ribonuclease Sa ebB146 25 COG4290 COG4290, Guanyl-specific ribonuclease Sa Nucleotide transport and metabolism 56479433 Common crp catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein) ebA7043 173 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56478632 Common ferA organic acid-CoA ligase (ADP forming),similar to feruloyl-CoA synthetase ebA5611 142 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 56476492 Common istA transposase c2A225 71 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479225 Common traF hypothetical protein ebA6633 25 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 56476668 Common qhpA quinohemoprotein amine dehydrogenase, 60 kDa subunit ebA2235 5 COG2863 COG2863, Cytochrome c553 Energy production and conversion 56476374 Common aroE shikimate 5-dehydrogenase ebA1735 208 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 56477827 Nonpathogen - hypothetical protein ebA4230 1 None None None 56478012 Common CoxA cytochrome c oxidase, subunit I ebA4544 167 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 56476758 Nonpathogen apc5 putative subunit of acetophenone carboxylase c1A97 1 None None None 56478155 Common hemH ferrochelatase ebA4802 166 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 56477864 Common - probable methyltransferase ebA4291 189 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56475685 Common int phage-related integrase ebA494 195 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56477661 Nonpathogen - hypothetical protein ebA3922 1 None None None 56478210 Common nth endonuclease III ebA4877 240 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 56477256 Nonpathogen - hypothetical protein ebA3232 1 None None None 56477383 Common emrB probable multidrug resistance B (Translocase) transmembrane protein ebA3448 191 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56477978 Common rpmG 50S ribosomal protein L33 ebC6 137 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 56477358 Common recA recombinase A ebA3396 226 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 56476304 Common - putative ABC-2 transporter hydrophilic component ebA1593 247 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 56477729 Nonpathogen - hypothetical protein ebA4042 1 None None None 56476743 Common ebdB beta-subunit of ethylbenzene dehydrogenase c1A63 154 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 56479406 Nonpathogen - hypothetical protein ebA6969 1 None None None 56478390 Common - putative peptidase family M48 protein ebA5205 62 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 56475645 Nonpathogen - hypothetical protein ebA406 1 None None None 56476727 Common - phosphatase 2C domain c1A229 130 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 56477623 Nonpathogen - hypothetical protein ebB134 2 None None None 56478950 Common - hypothetical protein ebA6152 18 None None None 56477844 Common wbpI UDP-N-acetylglucosamine 2-epimerase ebA4257 150 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 56476329 Common wcaG predicted Nucleoside-diphosphate-sugar epimerase ebA1639 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56476732 Common trmB tRNA (guanine-N(7))-methyltransferase c1A43 172 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 56475464 Nonpathogen - hypothetical protein ebA53 1 None None None 56476128 Common hisF imidazoleglycerol phosphate synthase ebA1291 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 56476455 Nonpathogen - hypothetical protein ebA1873 1 None None None 56478424 Common acnA aconitate hydratase ebA5264 222 COG1048 AcnA, Aconitase A Energy production and conversion 56476917 Common nfeD putative nodulation efficiency protein D ebA2632 73 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 56478281 Nonpathogen - hypothetical protein ebA5002 1 None None None 56476949 Common - DNA-binding protein ebA2689 45 COG2944 COG2944, Predicted transcriptional regulator Transcription 56478642 Nonpathogen - hypothetical protein ebB199 1 None None None 56477180 Common sbcC exonuclease SbcC ebA3110 80 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 56479512 Nonpathogen - hypothetical protein ebA7187 1 None None None 56477655 Common marR transcriptional regulator, MarR family ebA3908 43 COG1846 MarR, Transcriptional regulators Transcription 56479274 Common merA hypothetical protein ebA6707 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 56478734 Common prfB peptide chain release factor 2 (RF-2) ebA5809 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 56477455 Common ribE riboflavin synthase subunit alpha ebA3569 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 56475597 Common - predicted sugar phosphatase of the HAD superfamily ebA312 90 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 56477302 Common plsC putative 1-acyl-sn-glycerol-3-phosphate acyltransferase ebA3306 96 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 56476057 Common hemA glutamyl-tRNA reductase ebA1179 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 56476135 Nonpathogen - hypothetical protein ebA1301 1 None None None 56478661 Common - predicted MaoC-like (R)-specific enoyl-CoA hydratase ebA5671 29 COG2030 MaoC, Acyl dehydratase Lipid metabolism 56476461 Common - acetyl-CoA acetyltransferase c2A172 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56475679 Common - transcriptional regulator, MocR family (containing a DNA-binding HTH domain and an aminotransferase domain) ebA483 176 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 56478396 Nonpathogen - hypothetical protein ebA5219 1 None None None 56478399 Common - ATPase-like protein ebA5222 23 None None None 56478449 Common bclA benzoate-CoA ligase ebA5301 223 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476880 Common phbZ predicted Esterase / PHB depolymerase family ebA2560 21 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 56477169 Nonpathogen - hypothetical protein ebA3074 1 None None None 56476505 Common int integrase/recombinase ebA1942 229 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56478580 Common istA transposase ebA5523 60 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478039 Nonpathogen - hypothetical protein ebA4595 6 None None None 56477772 Common nadA quinolinate synthetase ebA4125 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 56478162 Common carB carbamoyl phosphate synthase large subunit ebA4815 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 56476179 Common - transcription elongation factor ebA1370 77 COG0782 GreA, Transcription elongation factor Transcription 56479136 Common bcp alkyl hydroperoxide reductase ebA6469 214 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56478892 Common - putative sensory transduction histidine kinase of highly complex domain structure ebA6051 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56476315 Common gspI general secretion pathway protein I ebB44 10 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56477017 Nonpathogen smuG single-strand selective monofunctional uracil DNA glycosylase ebA2814 3 None None None 56477362 Common - predicted TRAP-type uncharacterized transport system protein, periplasmic component ebA3407 47 COG2358 Imp, TRAP-type uncharacterized transport system, periplasmic component General function prediction only 56475659 Common - hypothetical protein ebA430 22 None None None 56475644 Common - hypothetical protein ebA405 21 None None None 56476373 Common - putative TonB protein ebA1737 39 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 56478831 Common - putative HNS-like transcription regulator protein ebB208 21 COG2916 Hns, DNA-binding protein H-NS General function prediction only 56479239 Common - hypothetical protein ebA6657 35 COG1273 COG1273, Uncharacterized conserved protein Function unknown 56477020 Common hemE uroporphyrinogen decarboxylase ebA2822 182 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 56477983 Common glcE glycolate oxidase FAD binding subunit ebA4491 146 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56476667 Common qhpX quinohemoprotein amine dehydrogenase, putative SAM-radical dependentactivating subunit ebA2233 113 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 56475474 Common istB transposition helper protein ebA70 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56476317 Common gspG general secretion pathway protein G ebB45 73 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56476172 Nonpathogen - hypothetical protein ebA1356 1 None None None 56477264 Nonpathogen - hypothetical protein ebA3247 1 None None None 56475997 Common bioB biotin synthase protein, gene: BIOB ebA1066 180 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 56478052 Common hfr hydroxypyruvate reductase ebA4615 86 COG2379 GckA, Putative glycerate kinase Carbohydrate transport and metabolism 56477971 Nonpathogen - hypothetical protein ebA4474 1 None None None 56478408 Nonpathogen - hypothetical protein ebA5237 1 None None None 56478806 Common - predicted DNA-binding protein H-NS ebB206 21 COG2916 Hns, DNA-binding protein H-NS General function prediction only 56478635 Common nagL probable maleylpyruvate isomerase ebA5616 169 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 56477421 Common ccmF cytochrome c-type biogenesis protein ebA3521 140 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 56475610 Nonpathogen - hypothetical protein ebA339 1 None None None 56477480 Common ftsN hypothetical protein, putative FtsN cell division protein ebA3615 28 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 56478216 Common rnfA NADH:ferredoxin oxidoreductase ebA4887 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 56475938 Common - predicted Ubiquinone biosynthesis protein COQ7 ebA942 49 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 56478974 Nonpathogen - hypothetical protein ebA6192 1 None None None 56479228 Nonpathogen traG putative C-terminal domain of TraG protein ebD19 3 None None None 56476064 Common - hypothetical protein ebA1189 102 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 56476836 Common int phage-related integrase ebA2481 92 None None None 56477642 Common fucA L-fuculose phosphate aldolase protein ebA3888 102 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 56478719 Common ppsA hypothetical protein ebA5781 159 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 56478442 Nonpathogen ORF3 putative regulatory protein,conserved in anaerobic benzoate degadation gene clusters ebA5292 5 COG0456 RimI, Acetyltransferases General function prediction only 56476904 Common hsdR Type I restriction-modification system endonuclease ebA2612 133 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 56478058 Common - probable transcription regulator protein ebA4627 178 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 56477674 Common dapF diaminopimelate epimerase ebA3950 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 56479105 Nonpathogen - hypothetical protein ebA6411 1 None None None 56477415 Common - hypothetical protein ebA3511 26 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 56477303 Nonpathogen - hypothetical protein ebA3311 1 None None None 56476871 Common - hypothetical protein ebA2542 75 COG2962 RarD, Predicted permeases General function prediction only 56477054 Common - hypothetical protein ebA2870 28 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 56478288 Common - hypothetical protein ebA5014 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 56479478 Common - hypothetical protein ebA7126 20 None None None 56478726 Nonpathogen ebdC2 ethylbenzene dehydrogenase, gamma subunit ebA5793 5 None None None 56478152 Common grpE putative GrpE protein (HSP-70 cofactor) ebA4795 227 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 56476195 Common mutM formamidopyrimidine-DNA glycosylase ebA1401 179 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 56477644 Common - putative aminotransferase ebA3890 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56479076 Common - putative aminotransferase ebA6367 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 56476881 Common - putative metal-dependent hydrolase ebD64 61 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 56477937 Common metG methionyl-tRNA synthetase ebA4404 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56478735 Common ompW outer membrane protein OmpW ebA5811 68 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 56475585 Common istB transposition helper protein ebA293 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478766 Common - putative metallo-beta-lactamase family protein ebA5857 124 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 56477229 Common - hypothetical protein ebA3188 20 COG5591 COG5591, Uncharacterized conserved protein Function unknown 56477552 Nonpathogen - hypothetical protein ebA3753 2 None None None 56476769 Common - hypothetical protein ebA2390 21 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 56477998 Nonpathogen - hypothetical protein ebA4518 8 None None None 56476036 Common - predicted phosphotransferase related to Ser/Thr protein kinase ebA1142 91 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 56475556 Common uspA universal stress protein ebA222 116 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 56477565 Common - hypothetical protein ebB121 5 None None None 56477067 Common - putative sensory box/GGDEF family protein ebA2896 182 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56479540 Common - hypothetical protein ebA7235 11 None None None 56476348 Common - probable serine/threonine protein kinase ebA1686 151 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 56478948 Common - hypothetical protein ebA6147 83 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 56479045 Common - hypothetical protein ebA6313 97 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 56475600 Common xccB biotin carboxyl carrier protein of unknown carboxylase ebB9 165 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 56477176 Common - hypothetical protein ebA3088 14 None None None 56477071 Nonpathogen - hypothetical protein ebA2904 1 None None None 56479429 Nonpathogen - hypothetical protein ebA7035 2 None None None 56475499 Common folD FolD bifunctional protein ebA118 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 56478322 Common bbsI ortholog of toluene-induced BbsI protein from T. aromatica ebA5090 114 COG1881 COG1881, Phospholipid-binding protein General function prediction only 56476044 Common hemY putative protein porphyrin biosynthesis ebA1158 39 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 56479411 Common - hypothetical protein ebA6987 8 None None None 56478264 Common tig trigger factor ebA4969 213 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 56478596 Common uvrC excinuclease ABC subunit C ebA5548 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 56475445 Common int phage-related integrase ebA27 214 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 56478028 Common sdhB succinate dehydrogenase iron-sulfur subunit ebA4578 202 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 56476323 Common - putative glycosyl transferase ebA1626 178 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56477905 Common - predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA ebA4355 155 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 56475950 Common - putative amidohydrolase ebA970 201 COG0388 COG0388, Predicted amidohydrolase General function prediction only 56477173 Common - hypothetical protein ebA3084 20 COG5404 SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation Cell division and chromosome partitioning 56479243 Common fabI enoyl-[acyl-carrier-protein] reductase ebA6664 236 COG0623 FabI, Enoyl- acyl-carrier-protein 56479342 Common minD septum site-determining protein minD ebA6838 133 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 56476983 Common - putative thioesterase ebA2752 17 COG0824 FcbC, Predicted thioesterase General function prediction only 56478344 Common - conserved hypothetical protein, predicted peptidase aspartic family ebA5121 52 COG3577 COG3577, Predicted aspartyl protease General function prediction only 56478375 Common - BNR/Asp-box repeat protein ebA5171 49 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 56477072 Common - hypothetical protein ebA2905 203 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56478740 Common - probable ATP-binding component, ABC transporter ebA5820 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 56476751 Common tcr2 two-component response regulator c1A82 216 COG4566 TtrR, Response regulator Signal transduction mechanisms 56476813 Common - hypothetical protein ebA2448 12 None None None 56477821 Nonpathogen - hypothetical protein ebA4221 1 None None None 56476431 Nonpathogen - hypothetical protein ebD40 2 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 56476679 Common gls1 ferredoxin-dependent glutamate synthase ebA2252 202 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 56478978 Common tnp48 transposase, is4 family ebA6199 41 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476804 Common - conserved hypothetical plasmid protein ebA2433 15 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 56477890 Common argB acetylglutamate kinase ebA4330 220 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 56479481 Common ilvH probable acetolactate synthase isozyme III (Small subunit) protein ebA7132 193 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 56476111 Common - hypothetical protein ebA1262 85 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 56477013 Common metX homoserine O-acetyltransferase ebA2806 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 56477280 Common istB transposase/IS protein ebA3279 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478362 Common sirB predicted Invasion gene expression up-regulator, SirB ebB180 29 COG3094 COG3094, Uncharacterized protein conserved in bacteria Function unknown 56479520 Common tnpF transposase, fragment ebD126 10 None None None 56479380 Common treY putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase ebA6918 156 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 56477122 Common gcdH glutaryl-CoA dehydrogenase ebA2993 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56477213 Nonpathogen pchC probable p-cresol methylhydroxylase subunit ebB97 6 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56475845 Common cheR methylase of chemotaxis methyl-accepting protein ebA790 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 56478161 Common carA carbamoyl phosphate synthase small subunit ebA4813 231 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 56478380 Common qhpB quinohemoprotein amine dehydrogenase 40 kDa subunit ebA5183 4 COG3391 COG3391, Uncharacterized conserved protein Function unknown 56479398 Nonpathogen - hypothetical protein ebA6957 1 None None None 56477478 Common ubiB putative ubiquinone biosynthesis protein UbiB ebA3613 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 56477608 Common rpsH 30S ribosomal protein S8 ebB129 242 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 56478046 Nonpathogen - hypothetical protein ebA4605 1 None None None 56478677 Common - hypothetical protein ebA5708 17 COG2128 COG2128, Uncharacterized conserved protein Function unknown 56475726 Common tnp11 transposase ebA562 54 None None None 56477372 Common livK predicted LivK, ABC-type branched-chain amino acid transport systems, periplasmic component ebA3428 92 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56478928 Common fpr ferredoxin-NADP reductase ebA6110 113 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 56477328 Common - hypothetical protein ebB107 15 None None None 56477549 Common - hypothetical protein ebA3749 18 None None None 56477344 Common - putative glutathione-S-transferase-related protein ebA3377 104 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 56476270 Common - probable acetylase ebA1519 108 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 56475709 Common - putative catalytic LigB subunit of aromatic ring-opening dioxygenase ebA536 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 56476535 Common tnp21 transposase ebA1991 57 None None None 56475698 Common tnp9A transposase ebB13 49 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478523 Nonpathogen - hypothetical protein ebA5431 1 None None None 56475971 Common - hypothetical protein ebA1022 131 COG2096 COG2096, Uncharacterized conserved protein Function unknown 56478251 Common bcp putative peroxiredoxin ebA4948 218 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 56478481 Common dctP predicted TRAP dicarboxylate transporter, DctP subunit ebA5362 100 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 56476860 Nonpathogen - hypothetical protein ebA2523 1 None None None 56478558 Nonpathogen - hypothetical protein ebD94 1 None None None 56478096 Nonpathogen - probable regulatory protein, LysR ebA4712 7 None None None 56479445 Common - hypothetical protein ebA7066 17 COG4258 COG4258, Predicted exporter General function prediction only 56478388 Common - beta-ketothiolase ebA5202 169 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56478526 Nonpathogen - hypothetical protein ebA5434 1 None None None 56479374 Common - putative glycosyl transferase ebA6907 220 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476334 Common - putative RND efflux membrane fusion protein precursor ebA1649 95 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56477127 Common atpB F0F1 ATP synthase subunit A ebA2999 198 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 56478071 Common - putative transcriptional regulatory protein ebA4655 84 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 56475517 Common poxB pyruvate decarboxylase ebA151 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 56477505 Common coxA2 cytochrome c oxidase, subunit I ebA3666 153 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 56478545 Nonpathogen - hypothetical protein ebA5460 1 None None None 56478944 Nonpathogen - hypothetical protein ebA6137 1 None None None 56478031 Common FDXA ferredoxin ebB155 126 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 56476975 Common - fragment of resolvase protein ebD66 10 None None None 56479290 Common - probable FAD/FMN-containing oxidoreductase ebA6736 69 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56475714 Common - hypothetical protein ebA544 63 COG1814 COG1814, Uncharacterized membrane protein Function unknown 56475984 Common ribD riboflavin biosynthesis bifunctional RIBD: diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein ebA1045 229 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 56476680 Common dgt1 deoxyguanosinetriphosphate triphosphohydrolase-like protein ebA2254 160 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 56476233 Common ftsI penicillin-binding 3 precursor PBP-3 transmembrane protein ebA1451 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 56476225 Common ddl D-alanine--D-alanine ligase ebA1442 214 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 56475598 Common xccA putative carboxylase subunit of acetyl-CoA carboxylase-like enzyme ebA314 140 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 56475489 Common tnp4 transposase (IS4) ebA99 35 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56478211 Common rnfE SoxR-reducing system protein RsxE ebA4878 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 56475901 Common nirN probable c-type cytochrome ebA876 19 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 56477873 Common - glycosyl transferase, family 2 ebA4304 152 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 56476148 Common - conserved hypothetical protein, predicted phosphatase ebA1316 102 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 56475750 Common - hypothetical protein ebA608 78 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 56476630 Common speE spermidine synthase ebA2152 132 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 56477352 Common ptsK HPr kinase/phosphorylase ebA3390 70 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 56478539 Common plsX fatty acid/phospholipid synthesis protein ebA5454 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 56476816 Common - hypothetical protein ebA2454 11 None None None 56476249 Common - probable transmembrane protein ebA1476 25 None None None 56477881 Common - hypothetical protein ebA4315 62 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 56477521 Common - putative Flp pilus assembly protein ebA3703 78 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 56476608 Nonpathogen - hypothetical protein ebA2121 1 None None None 56477968 Common ompR DNA-binding response regulator OmpR ebA4468 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 56478484 Common hbcL1 4-hydroxybenzoate CoA ligase ebA5368 217 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476748 Common tcs1 two-component sensor c1A75 159 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 56475643 Common - hypothetical protein ebA403 34 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 56478470 Nonpathogen - hypothetical protein ebA5334 1 None None None 56475965 Nonpathogen cytC6 probable di-heme cytochrome c ebA1004 14 None None None 56476650 Nonpathogen - hypothetical protein ebA2196 2 None None None 56478359 Common phbC poly-beta-hydroxybutyrate synthase ebA5140 73 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 56478597 Common pgsA CDP-diacylglycerol--glycerol-3-phosphatidyltrans ferase ebA5549 189 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 56478078 Common - acetyl-CoA synthetase ebA4666 206 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476477 Nonpathogen - hypothetical protein c2B001 1 None None None 56477639 Common - hypothetical protein ebA3882 81 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 56478921 Common - conserved hypothetical protein, predicted methyltransferase ebA6099 30 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56479422 Common - hypothetical protein ebA7011 32 None None None 56478436 Common bcrC C-subunit of benzoyl-CoA reductase ebA5282 36 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 56477226 Nonpathogen - hypothetical protein ebA3182 1 None None None 56477802 Common phnA uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism ebB143 106 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 56475876 Common radC DNA repair protein, radC ebA840 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 56478297 Nonpathogen - hypothetical protein ebA5034 1 None None None 56477949 Common ispA polyprenyl synthetase ebA4440 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 56475931 Common tyrS tyrosyl-tRNA synthetase ebA931 239 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56477735 Common - putative iron-sulfur binding protein ebA4051 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 56476578 Common - small Fe/S-containing subunit of molybdenum enzyme ebA2063 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 56475691 Common - conserved hypothetical protein, predicted Glycosyl transferase family 28 ebA506 47 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 56477063 Common - hypothetical protein ebA2887 7 None None None 56476642 Common - predicted protein-S-isoprenylcysteine methyltransferase ebA2182 49 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 56475492 Nonpathogen - hypothetical protein ebA104 1 COG2512 COG2512, Uncharacterized membrane-associated protein/domain Function unknown 56476511 Common tnpF6 transposase, fragment ebB55 53 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479068 Common - endonuclease ebA6352 27 None None None 56478794 Common - predicted nucleoside-diphosphate sugar epimerase ebA5901 136 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56475672 Common istA transposase ebB12 40 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478683 Common - two-component system response regulator ebA5719 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56475947 Common - probable two-component transcriptional regulator ebA966 217 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 56475908 Common cysG uroporphyrinogen-III methylase, siroheme synthase, C-terminal domain ebA885 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 56479023 Common nosR nosr (C-terminal domain) ebB224 5 None None None 56478254 Common thrA homoserine dehydrogenase ebA4952 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 56478937 Common yrdC putative translation factor YrdC/SUA5 ebA6128 224 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 56475620 Common - hypothetical protein ebA355 9 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 56479333 Common selD selenophosphate synthetase ebA6817 157 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 56479005 Common - putative long-chain-fatty-acid-CoA ligase ebA6242 200 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 56477930 Common qor quinone oxidoreductase ebA4396 185 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 56479052 Common - complex sensory protein with histidine kinase domain ebA6328 216 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 56477851 Common - amidotransferase, similar to asparagine synthase (glutamine-hydrolyzing) ebA4265 156 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 56478822 Nonpathogen - hypothetical protein ebA5946 1 None None None 56477682 Common cafA ribonuclease G (RNase G) ebA3964 184 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 56479025 Common nosZ nitrous-oxide reductase ebA6272 40 COG4263 NosZ, Nitrous oxide reductase Energy production and conversion 56478530 Common - low molecular weight phosphotyrosine protein phosphatase ebA5440 144 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 56477581 Common secE preprotein translocase subunit SecE ebA3810 29 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 56477322 Common tnpF12 putative transposase, fragment (IS4) ebA3341 23 None None None 56479152 Common bolA stress-induced morphogen BolA ebD120 34 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 56475911 Common - conserved hypothetical protein, predicted Transglycosylase-associated protein family ebA889 59 COG2261 COG2261, Predicted membrane protein Function unknown 56478425 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase ebA5265 216 COG1049 AcnB, Aconitase B Energy production and conversion 56476250 Common dgkA diacylglycerol kinase ebA1477 62 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 56476786 Common - hypothetical protein ebB70 18 None None None 56475453 Common sthA putative glycosyltransferase ebA40 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 56478967 Common folE GTP cyclohydrolase I ebA6179 176 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 56477293 Common - Zn-dependent hydrolase ebA3296 65 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56476341 Common - probable fusion of ABC transporter-type transmembrane and ATP binding protein ebA1666 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 56477533 Nonpathogen - INTERPRO: probable Flp/Fap pilin component ebD22 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 56478493 Nonpathogen - hypothetical protein ebA5388 1 None None None 56478581 Common istB putative transposition helper protein ebA5526 53 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477744 Common glnS glutaminyl-tRNA synthetase ebA4065 248 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 56477912 Common dnaG DNA primase ebA4367 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 56479265 Common - transcription regulator protein ebA6693 130 COG2188 PhnF, Transcriptional regulators Transcription 56479554 Nonpathogen - putative protein of the phage holin family (Lysis protein S) ebA7268 1 None None None 56476593 Nonpathogen - hypothetical protein ebD54 1 None None None 56475918 Common ugd UDP-glucose dehydrogenase ebA899 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 56477078 Common gidB glucose-inhibited division protein B ebA2913 115 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 56479050 Common - hypothetical protein ebA6322 196 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 56477038 Nonpathogen - hypothetical protein ebA2850 1 None None None 56478571 Common tnp42A probable transposase, N-terminal half ebB195 40 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478063 Common cioA cyanide insensitive terminal oxidase ebA4639 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 56476649 Common - predicted Acetyl-CoA synthetase ebA2194 174 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 56477223 Common - hypothetical protein ebA3176 11 None None None 56479144 Common - DNA polymerase-related protein,bacteriophage-type ebA6487 155 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 56479350 Common - probable phasin ebA6852 16 None None None 56478454 Common - putative ABC-transporter ebA5309 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56476654 Nonpathogen - hypothetical protein ebA2204 1 None None None 56477790 Nonpathogen - hypothetical protein ebA4157 1 None None None 56479288 Common - hypothetical protein ebA6732 15 None None None 56479281 Common - hypothetical protein ebA6719 11 COG5642 COG5642, Uncharacterized conserved protein Function unknown 56476099 Common purA adenylosuccinate synthetase ebA1249 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 56477923 Common rlpB putative lipoprotein B precursor ebA4385 26 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 56475814 Common bcrB benzoyl CoA reductase subunit ebA746 19 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 56477669 Common - TonB-dependent receptor ebA3937 102 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 56477585 Common rplJ 50S ribosomal protein L10 ebA3816 212 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 56478080 Common - probable endonuclease ebA4672 95 COG1403 McrA, Restriction endonuclease Defense mechanisms 56479232 Common guaB inosine-5'-monophosphate dehydrogenase ebA6647 239 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 56475802 Common - putative alcohol dehydrogenase ebA723 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56476275 Common wcaJ colanic biosynthesis UDP-glucose lipid carrier transferase ebA1531 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 56476475 Common bssG hypothetical protein c2A197 7 None None None 56475794 Nonpathogen flhF possible flagellar biosynthetic protein FlhF ebA698 1 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 56476285 Nonpathogen - hypothetical protein ebA1550 1 None None None 56479218 Common traF hypothetical protein ebA6617 25 COG4959 TraF, Type IV secretory pathway, protease TraF Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 56476443 Nonpathogen - hypothetical protein ebA1855 5 None None None 56478896 Common - predicted calcineurin-like phosphoesterase ebA6067 34 COG2129 COG2129, Predicted phosphoesterases, related to the Icc protein General function prediction only 56479364 Common - hypothetical protein ebA6881 4 None None None 56475706 Nonpathogen - hypothetical protein ebA531 1 None None None 56477024 Common - sensory transduction histidine kinase ebA2830 222 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 56476777 Common - hypothetical protein ebA2400 18 None None None 56479389 Common - conserved hypothetical protein, predicted glycosyltransferase ebA6934 149 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56476716 Common - putative enoyl-CoA hydratase II ebA2313 175 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477351 Common - threonine dehydratase ebA3389 206 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 56477433 Common paaG enoyl-CoA hydratase ebA3542 168 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477494 Common - putative acyl CoA dehydrogenase oxidoreductase protein ebA3640 164 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56478651 Common - mandelate racemase/muconate lactonizing enzyme family protein ebA5652 140 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 56476571 Common hyuA hydantoin utilization protein A ebA2051 115 COG0145 HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56475774 Common purN phosphoribosylglycinamide formyltransferase protein ebA655 218 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 56476030 Common nnr transcriptional regulator, Nnr-like ebD1 92 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 56477207 Common - putative transmembrane protein ebA3154 40 None None None 56477714 Nonpathogen - hypothetical protein ebA4012 1 None None None 56476798 Common - hypothetical protein ebA2425 21 None None None 56478930 Common - hypothetical protein ebA6113 38 COG3016 PhuW, Uncharacterized iron-regulated protein Function unknown 56476549 Common istA transposase ebA2008 73 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476552 Common istB transposase/IS protein ebA2013 92 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477106 Common lysR transcriptional regulator, LysR family ebA2966 189 COG0583 LysR, Transcriptional regulator Transcription 56477529 Common cpaB pilus assembly transmembrane protein ebA3714 65 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 56476014 Common gapA glyceraldehyde 3-phosphate dehydrogenase ebA1102 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 56476491 Nonpathogen - hypothetical protein c2A224 1 None None None 56475634 Common tnpF3 transposase (fragment) ebA382 53 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476577 Common - medium FAD-binding subunit of molybdenum enzyme ebA2062 104 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 56477036 Common gyrB DNA gyrase subunit B ebA2848 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 56479341 Common minC septum site-determining protein minC ebA6837 86 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 56478298 Common - hypothetical protein ebA5035 58 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 56475851 Nonpathogen - hypothetical protein ebD31 1 None None None 56476397 Common - N6-adenine-specific DNA methylase ebA1773 135 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 56479194 Common - hypothetical protein ebA6574 12 None None None 56476963 Common modB molybdenum transport system permease ebA2720 206 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 56478140 Common - hypothetical protein ebA4781 39 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 56477736 Common - hypothetical protein ebA4052 84 COG1556 COG1556, Uncharacterized conserved protein Function unknown 56476557 Common - GCN5-related N-acetyltransferase ebA2019 46 COG0456 RimI, Acetyltransferases General function prediction only 56476259 Nonpathogen - hypothetical protein ebA1496 3 None None None 56477863 Nonpathogen - hypothetical protein ebA4287 7 None None None 56478859 Common - probable outer membrane protein/surface antigen ebA5996 161 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 56477914 Common rpsU 30S ribosomal protein S21 ebA4370 127 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 56478665 Common - isopentenyl-diphosphate delta-isomerase ebA5678 41 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 56475821 Nonpathogen - hypothetical protein ebA756 1 None None None 56476998 Nonpathogen - hypothetical protein ebA2779 2 None None None 56477752 Common priB primosomal replication protein N ebD80 20 COG2965 PriB, Primosomal replication protein N DNA replication, recombination, and repair 56478173 Common pstB phosphate ABC transporter, ATP-binding protein ebA4830 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 56476965 Common recD DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit ebA2722 119 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 56476169 Nonpathogen - hypothetical protein ebA1350 1 None None None 56478011 Common coxC subunit III of cytochrome c oxidase,also similar to C-terminal domain of long variants of subunit I ebA4542 11 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 56478551 Common degQ serine protease DegQ/MucD ebA5470 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 56475924 Common tyrA prephenate dehydrogenase ebA905 157 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 56477828 Common coxC cytochrome c oxidase, subunit III ebA4231 124 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 56478898 Common - conserved hypothetical protein, putatively exported via twin-arginine system ebA6069 12 COG1633 COG1633, Uncharacterized conserved protein Function unknown 56478608 Nonpathogen - hypothetical protein ebB197 1 None None None 56477989 Common pntB pyridine nucleotide transhydrogenase subunit beta ebA4500 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 56476223 Common ftsA cell division protein FTSA ebA1439 190 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 56475882 Common - hypothetical protein ebA849 35 None None None 56476324 Common apaH diadenosine tetraphosphatase ebA1627 109 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 56478701 Common - putative sensory protein, two-component system ebA5750 160 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 56478918 Nonpathogen - hypothetical protein ebA6095 1 None None None 56478491 Common - conserved hypothetical protein, similar to putative regulatory protein involved in in phenol degradation ebA5384 25 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 56478171 Common pstC phosphate ABC transporter, permease protein ebA4828 223 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 56475927 Common gyrA DNA gyrase subunit A ebA909 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 56479348 Common - sensory histidine kinase ebA6844 176 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 56478548 Common rseA anti sigma-E protein ebA5464 4 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 56479090 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase ebA6390 228 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 56478178 Common nuoC NADH dehydrogenase subunit C ebA4836 164 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 56476653 Common lysR transcriptional regulator, LysR family ebA2202 99 COG0583 LysR, Transcriptional regulator Transcription 56476973 Common - putative heat shock protein ebA2733 163 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 56478139 Common folC putative bifunctional protein: folylpolyglutamate synthase and dihydrofolate synthase ebA4777 217 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 56478357 Common UspA universal stress protein ebB179 112 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 56476307 Common - hypothetical protein ebA1598 5 None None None 56478610 Common - conserved hypothetical protein, predicted autoinducer synthesis protein family ebA5570 70 COG3176 COG3176, Putative hemolysin General function prediction only 56475741 Common trmA tRNA (uracil-5-)-methyltransferase ebA595 173 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 56478402 Common - hypothetical protein ebA5225 33 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 56478875 Nonpathogen - hypothetical protein ebA6025 1 None None None 56475795 Common flhA flagellar biosynthesis protein flha ebA702 124 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 56476058 Common - sensor histidine kinase transcription, regulator protein ebA1181 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 56479387 Common rpoN2 RNA polymerase sigma N (Sigma 54) factor transcription regulator protein ebA6931 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 56477841 Common - probable exopolysaccharide biosynthesis protein ebA4250 137 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56475707 Common pinR site-specific recombinases ebA532 58 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 56475541 Nonpathogen - hypothetical protein ebA184 3 None None None 56475504 Common - branched-chain amino acid ABC transporter,periplasmic amino acid-binding protein ebA127 136 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56476100 Common hisZ ATP phosphoribosyltransferase regulatory subunit ebA1250 113 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 56478217 Common pyrD dihydroorotate dehydrogenase 2 ebA4888 192 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 56477203 Common korA2 2-oxoglutarate ferredoxin oxidoreductase alpha subunit ebA3149 106 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 56476681 Common aroB 3-dehydroquinate synthase ebA2256 211 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 56475501 Common iorA indolepyruvate ferredoxin oxidoreductase, subunit alpha ebA122 113 COG4231 COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Energy production and conversion 56477813 Common pabA anthranilate synthase (Component II) ebA4199 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 56478130 Common leuB 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) ebA4760 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 56477874 Common tnpF13 putative transposase (IS4, fragment) ebA4306 32 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56479552 Nonpathogen - hypothetical protein ebA7265 1 None None None 56475465 Common - conserved hypothetical protein, predicted bacterioferritin family ebA54 25 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 56476787 Common - hypothetical protein ebA2412 15 None None None 56478335 Nonpathogen - hypothetical protein ebA5106 1 None None None 56479121 Common - hypothetical protein ebA6442 67 None None None 56479450 Common fabA potential 3-hydroxydecyl-(acyl carrier protein) dehydratase ebD21 17 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 56478997 Common - ABC transporter, ATP-binding protein ebA6230 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 56476699 Nonpathogen - hypothetical protein ebD59 6 None None None 56476092 Common - hypothetical protein ebA1237 4 None None None 56478099 Common kctA succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A ebA4718 107 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 56478678 Common - putative MFS permease family protein ebA5710 51 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56478643 Common - mandelate racemase/muconate lactonizing enzyme family protein ebA5637 140 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 56475758 Common - hypothetical protein ebA624 10 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56475472 Common - hypothetical protein ebA67 27 COG1715 Mrr, Restriction endonuclease Defense mechanisms 56477564 Nonpathogen - hypothetical protein ebA3775 1 None None None 56479081 Common typA GTP-binding protein with elongation factor-like domain ebA6376 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 56475955 Nonpathogen - hypothetical protein ebA983 3 None None None 56479376 Common - HAD-superfamily hydrolase ebA6910 127 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 56476523 Common acrA acriflavin resistance protein A ebA1971 156 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56476589 Common - possible NifU homolog ebD53 52 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 56475765 Common lysC aspartate kinase ebA637 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 56477467 Common - conserved hypothetical protein, predicted peptidase U32 falily ebA3592 46 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 56476469 Common bssD benzylsuccinate synthase activating enzyme c2A302 62 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 56476742 Nonpathogen ebdC gamma-subunit of ethylbenzene dehydrogenase c1A62 5 None None None 56479188 Common - predicted fructosamine kinase ebA6563 70 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 56476740 Common ped (S)-1-Phenylethanol dehydrogenase c1A58 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56475958 Common - NTP pyrophosphohydrolase, oxidative damage repair enzyme, NUDIX hydrolase ebA990 51 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56476105 Common hfq putative RNA-binding regulatory protein ebA1255 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 56477722 Common - nitroreductase family protein ebA4029 121 COG0778 NfnB, Nitroreductase Energy production and conversion 56478981 Common cysP periplasmic thiosulfate-binding protein ebA6204 89 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 56477694 Common - carbamoyltransferase, NodU family ebA3984 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 56477660 Common - predicted Fe-S oxidoreductase ebA3918 167 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 56478509 Common - hypothetical protein ebA5409 43 COG3332 COG3332, Uncharacterized conserved protein Function unknown 56477746 Nonpathogen - predicted camphor resistance CrcB family protein ebA4067 1 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 56479051 Common - predicted substrate-binding protein involved in ABC-type nitrate/sulfonate/bicarbonate transport system ebA6324 86 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 56479294 Common - ABC transporter ebA6745 159 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 56479177 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ebA6543 195 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 56475775 Common mutL hypothetical protein ebA658 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 56476725 Common - hypothetical protein c1A25 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 56477633 Common acrB predicted acriflavin resistance protein ebA3873 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 56477336 Common - fusion protein of flavin-containing oxidoreductase and iron-sulfur-containing oxidoreductase ebA3359 160 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56477512 Common - conserved hypothetical protein, potential methyltransferase ebA3679 5 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56478781 Common capG hypothetical protein ebA5878 151 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 56476366 Common - hypothetical protein, putative partial gene related to modC ebA1720 19 None None None 56479460 Common - hypothetical protein ebA7093 38 COG4680 COG4680, Uncharacterized protein conserved in bacteria Function unknown 56478788 Common - hypothetical protein ebA5889 36 COG4823 AbiF, Abortive infection bacteriophage resistance protein Defense mechanisms 56479326 Common - hypothetical protein ebA6805 43 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 56476701 Common - hypothetical protein ebA2288 46 None None None 56478688 Common paaE2 hypothetical protein ebA5725 145 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 56479135 Common slyD FKBP-type peptidyl-prolyl cis-trans isomerase (Rotamase) protein ebA6468 120 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 56478603 Nonpathogen - hypothetical protein ebA5558 1 None None None 56475796 Common flhB flagellar biosynthetic protein flhB ebA705 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 56476043 Common hemF coproporphyrinogen III oxidase ebA1156 112 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 56476563 Nonpathogen - hypothetical protein ebD49 1 None None None 56476582 Common - hypothetical protein ebA2072 11 None None None 56478628 Nonpathogen - hypothetical protein ebA5606 1 None None None 56479102 Common cysE O-acetylserine synthase ebA6405 190 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 56478730 Common - hypothetical protein ebA5802 105 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 56476054 Common - predicted Glutaredoxin-related protein ebA1175 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 56477520 Common - bacterial type II secretion system protein,probably involved in Flp pilus synthesis ebA3702 65 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 56477187 Nonpathogen - hypothetical protein ebA3122 1 None None None 56478577 Common istB transposition helper protein ebA5514 100 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56479205 Common - AAA ATPase superfamily protein, fragment ebA6589 56 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 56477508 Common - hypothetical protein ebA3672 53 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 56476375 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase ebA1739 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 56475873 Common - predicted isopentenyl-diphosphate delta-isomerase ebA836 59 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56476918 Common - putative stomatin-like transmembrane protein ebA2633 205 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 56477219 Common - putative ABC transport protein ebA3170 151 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 56477728 Common ppcK phosphoenolpyruvate carboxykinase ebA4040 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 56476031 Common - hypothetical protein ebA1135 24 None None None 56477936 Common sulP sulfate transporter ebA4402 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 56475664 Nonpathogen - hypothetical protein ebB11 1 None None None 56478229 Common - hypothetical protein ebA4910 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56477394 Common thrH homoserine kinase ebA3466 28 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 56479116 Common - molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, medium subunit ebA6435 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 56475869 Common icd isocitrate dehydrogenase ebA829 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 56476757 Common bal possible benzoylacetate-CoA ligase c1A95 108 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 56476112 Common pilF type IV fimbrial biogenesis protein ebA1266 50 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 56478648 Common - outer membrane porin protein, similar to precursor (OMP32) ebA5644 30 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 56476454 Nonpathogen - hypothetical protein ebA1872 1 None None None 56475716 Common cls cardiolipin synthetase ebA550 160 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 56476487 Common bbsD subunit of 2-[hydroxy(phenyl)methyl]-succinyl-CoA DH c2A313 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56477654 Common - conserved hypothetical protein, predicted sugar transporter superfamily ebA3906 193 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 56477282 Nonpathogen - hypothetical protein ebA3281 1 None None None 56477810 Common hyfB hydrogenase 4 subunit B ebA4193 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 56477135 Common - hypothetical protein ebA3010 23 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 56479489 Common - potential ortholog of Methylophilus methylotrophus cytochrome c'' ebA7148 13 None None None 56476822 Common - hypothetical protein ebA2462 22 None None None 56476084 Common - serine protease, subtilase family ebA1220 137 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 56476086 Common - putative bacterial general secretion pathway protein G related protein ebA1223 92 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 56477315 Nonpathogen - hypothetical protein ebA3331 1 None None None 56478409 Nonpathogen - hypothetical protein ebA5238 2 None None None 56478025 Common - hypothetical protein ebA4574 13 COG3945 COG3945, Uncharacterized conserved protein Function unknown 56475800 Common - enoyl-CoA hydratase ebA720 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477152 Common rlpA hypothetical protein ebA3043 135 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 56476136 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase ebA1302 221 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 56476428 Common - hypothetical protein ebA1830 189 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 56477301 Nonpathogen - hypothetical protein ebA3307 1 None None None 56476626 Nonpathogen - hypothetical protein ebA2144 1 None None None 56476909 Common cysI sulfite reductase ebA2619 162 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 56475678 Common - hypothetical protein ebA480 30 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 56478391 Common orn oligoribonuclease ebA5206 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 56479393 Common - bacterioferritin ebA6943 37 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 56477843 Common - general secretion pathway protein-related protein ebA4256 71 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 56475646 Nonpathogen - hypothetical protein ebA407 1 None None None 56476427 Common - conserved hypothetical protein, predicted malonyl-CoA decarboxylase family ebA1829 29 None None None 56475970 Common alaS alanyl-tRNA synthetase ebA1021 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56477903 Common ffH signal recognition particle protein ebA4351 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 56477389 Nonpathogen - hypothetical protein ebA3458 1 None None None 56478871 Common bioF aminotransferase class-I ebA6018 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 56475657 Common - disulfide bond isomerase ebA426 43 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 56479305 Common ilvD dihydroxy-acid dehydratase ebA6761 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 56476386 Common - putative transcriptional regulator ebA1753 130 COG1678 COG1678, Putative transcriptional regulator Transcription 56477481 Common dsbA thiol:disulfide interchange protein dsbA precursor ebA3617 66 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 56476420 Common - hypothetical protein ebA1817 81 COG0730 COG0730, Predicted permeases General function prediction only 56478514 Common holB DNA-directed DNA polymerase III, delta subunit ebA5417 216 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 56477031 Common - hypothetical protein ebB89 183 COG0759 COG0759, Uncharacterized conserved protein Function unknown 56477763 Common - hypothetical protein ebA4108 7 None None None 56479078 Common - hypothetical protein ebA6371 125 COG1881 COG1881, Phospholipid-binding protein General function prediction only 56479159 Common tatD putative tatD deoxyribonuclease ebA6514 235 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 56479510 Common - hypothetical protein ebA7184 119 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 56479126 Nonpathogen - hypothetical protein ebA6451 1 None None None 56475463 Nonpathogen - hypothetical protein ebA52 1 None None None 56476537 Common phbZ poly(3-hydroxybutyrate) depolymerase ebA1994 40 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 56476280 Common - antitoxin of toxin-antitoxin stability system ebA1542 48 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 56479496 Common wrbA flavodoxin-like protein ebA7157 109 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 56477963 Common - hypothetical protein ebB151 17 None None None 56478674 Common - hypothetical protein ebA5694 2 None None None 56477693 Common - putative sodium/alanine symporter family protein ebA3983 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 56478083 Common cysK cysteine synthase A ebA4678 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 56479066 Common - hypothetical protein ebA6349 29 None None None 56479125 Common - conserved hypothetical protein, predicted esterase ebA6450 33 COG2312 COG2312, Erythromycin esterase homolog General function prediction only 56476955 Common - probable Leucine-Binding Protein (LBP) precursor ebA2700 128 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 56476444 Nonpathogen - hypothetical protein ebA1856 1 None None None 56477379 Common - hypothetical protein ebA3441 30 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 56478662 Common - acetyl-CoA acetyltransferase ebA5673 90 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56476661 Common - hypothetical protein ebA2217 12 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 56476726 Common - protein kinase c1A29 147 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 56478437 Common bcrB benzoyl CoA reductase subunit ebA5284 17 COG1775 HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Amino acid transport and metabolism 56479506 Common holC DNA polymerase III, chi subunit ebA7175 29 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 56477479 Common argS arginyl-tRNA synthetase ebA3614 242 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56478374 Common - transport protein ebA5169 146 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 56476619 Nonpathogen - hypothetical protein ebD56 1 None None None 56477685 Common - conserved hypothetical protein, predicted iojap-related protein family ebA3971 200 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 56477805 Common hyfI subunit of putative formate hydrogenlyase-like membrane complex ebA4186 192 COG3260 COG3260, Ni,Fe-hydrogenase III small subunit Energy production and conversion 56478958 Common ftsB cell division FtsB ortholog ebD109 62 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 56478104 Common com1 putative competence lipoprotein precursor ebA4724 120 COG4105 ComL, DNA uptake lipoprotein General function prediction only 56478345 Common - hypothetical protein ebA5123 127 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 56478382 Common - hypothetical protein ebA5187 6 None None None 56479166 Common ppx putative exopolyphosphatase ebA6525 180 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 56479381 Common - putative maltooligosyltrehalose trehalohydrolase ebA6920 150 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 56475488 Common trbL plasmid like TrbL protein, component of conjugation system ebA97 23 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 56477622 Common uvrA UvrABC system protein A (excinuclease ABC subunit A) ebA3857 240 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 56478658 Common - putative acyl-CoA dehydrogenase oxidoreductase protein ebA5668 142 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 56476694 Common rmlA glucose-1-phosphate thymidylyltransferase ebA2277 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 56477244 Common - hypothetical protein ebA3206 23 COG5591 COG5591, Uncharacterized conserved protein Function unknown 56476778 Common - DNA repair protein similar to radC-family ebA2402 171 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 56476529 Common - DnaK-related protein ebA1979 19 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 56478124 Common ilvN acetolactate synthase 1 regulatory subunit ebB162 100 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 56476127 Common hisI phosphoribosyl-AMP cyclohydrolase ebB39 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 56476708 Common CV1508 probable transmembrane protein ebA2301 54 COG1434 COG1434, Uncharacterized conserved protein Function unknown 56477188 Nonpathogen - hypothetical protein ebA3125 1 None None None 56477709 Common cobS cobalamin synthase ebA4005 95 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 56475601 Common - hypothetical protein ebA318 29 COG5441 COG5441, Uncharacterized conserved protein Function unknown 56478261 Common - hypothetical protein ebA4964 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 56478845 Nonpathogen - probable binding-protein-dependent transport system protein ebA5975 7 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 56479357 Common serA D-3-phosphoglycerate dehydrogenase ebA6869 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 56478252 Common - hypothetical protein ebA4950 45 COG3737 COG3737, Uncharacterized conserved protein Function unknown 56476538 Common - hypothetical protein ebA1996 13 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 56477941 Common - predicted Orn/Lys/Arg decarboxylase ebA4413 86 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 56477070 Common - hypothetical protein ebA2903 15 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 56477906 Common - hypothetical protein ebA4356 156 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 56475529 Nonpathogen - hypothetical protein ebA170 10 None None None 56477703 Common waaC heptosyltransferase I ebA3997 82 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 56478291 Common cybB probable cytochrome b561 ebA5023 82 COG3038 CybB, Cytochrome B561 Energy production and conversion 56477117 Common - putative two component response regulator ebA2986 193 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 56478908 Common - putative antitoxin of toxin-antitoxin stability system ebD103 30 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 56476150 Common - OstA-like family protein ebA1320 61 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 56477887 Common - putative acyl-CoA synthetase ebA4326 216 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56476693 Common rmlC DTDP-4-dehydrorhamnose 3,5-epimerase ebA2275 166 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 56478588 Common lepB signal peptidase I (SPase I) transmembrane protein ebA5536 212 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 56478595 Common nagZ beta-hexosaminidase ebA5547 175 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 56476301 Common - probable glycosyl transferase ebA1585 85 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 56475633 Common soj probable chromosome partitioning related protein ebA381 101 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 56477357 Nonpathogen - hypothetical protein ebA3395 1 None None None 56478441 Nonpathogen - hypothetical protein ebB187 1 None None None 56479456 Nonpathogen - hypothetical protein ebA7085 1 None None None 56477751 Common rpsF 30S ribosomal protein S6 ebA4075 199 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 56478807 Common - hypothetical protein ebA5923 8 COG5652 COG5652, Predicted integral membrane protein Function unknown 56476750 Common tcs2 two-component sensor c1A81 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 56478253 Common - aminotransferase AlaT ebA4951 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 56476314 Common gspJ general secretion pathway protein J ebA1615 7 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 56477327 Common mazF mazf-like predicted growth inhibitor,ccdB family ebB106 22 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 56477216 Common adh benzyl alcohol dehydrogenase ebA3166 202 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 56475454 Nonpathogen - hypothetical protein ebA41 1 None None None 56475727 Common istB transposition helper protein ebA563 68 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475860 Common - putative 2-haloalkanoic acid dehalogenase ebA812 64 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 56475531 Common acsA acetyl-CoA synthetase ebA172 213 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 56476340 Common - probable sigma-N-dependent transcriptional regulator ebA1664 167 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 56477012 Common - hypothetical protein ebA2804 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 56477294 Common - hypothetical protein ebA3297 86 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 56478045 Common tnp37 transposase ebA4604 49 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 56478464 Common tnpB transposase, C-terminal fragment ebA5324 50 None None None 56477643 Common mtnA methylthioribose-1-phosphate isomerase ebA3889 131 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 56476445 Nonpathogen - hypothetical protein ebA1857 1 None None None 56477534 Common flp pilus assembly protein, pilin component ebA3721 2 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 56477836 Nonpathogen - hypothetical protein ebA4243 1 None None None 56478040 Common metC cystathionine beta-lyase, putative, gene: metC ebA4598 208 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 56477119 Common - hypothetical protein ebA2989 43 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 56476814 Common - hypothetical protein ebA2450 14 None None None 56477822 Common recQ ATP-dependent DNA helicase protein ebA4224 221 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 56479484 Common pssA CDP-diacylglycerol-serine O-phosphatidyltransferase ebA7137 147 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 56476500 Common - hypothetical protein ebA1936 18 None None None 56477519 Common - hypothetical protein ebA3696 38 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 56475522 Common - hypothetical protein ebA159 17 COG4244 COG4244, Predicted membrane protein Function unknown 56476178 Common - putative transcription regulator protein, lysR family ebA1369 177 COG0583 LysR, Transcriptional regulator Transcription 56475696 Common - hypothetical protein ebA515 2 None None None 56476437 Common - hypothetical protein ebA1846 170 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56476032 Common ksgA dimethyladenosine transferase ebA1138 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 56478524 Nonpathogen - hypothetical protein ebA5432 1 None None None 56479289 Common - putative methyltransferase ebA6733 90 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56477399 Common - putative hydrolase ebA3472 120 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56477374 Common - ATP-binding ABC transporter protein ebA3430 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56478652 Common - ABC transporter, ATP-binding protein ebA5654 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 56479399 Common ndh putative NADH dehydrogenase ebA6958 178 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 56475848 Nonpathogen - hypothetical protein ebA795 1 None None None 56479244 Common ppiD PpiC-type peptidyl-prolyl cis-trans isomerase ebA6665 165 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56476519 Common badK cyclohex-1-ene-1-carboxyl-CoA hydratase ebA1961 186 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477668 Common - hypothetical protein ebA3935 6 COG3295 COG3295, Uncharacterized protein conserved in bacteria Function unknown 56479206 Common - 5-methylcytosine-specific restriction enzyme subunit McrC ebA6590 10 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 56476879 Common - hypothetical protein with C-terminal half orthologous to NapD, a probable assembly factor of periplasmic nitrate reductase ebA2558 5 COG3062 NapD, Uncharacterized protein involved in formation of periplasmic nitrate reductase Inorganic ion transport and metabolism 56476273 Nonpathogen - hypothetical protein ebA1522 1 None None None 56478125 Common aroC chorismate synthase ebA4753 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 56479240 Common oppC oligopeptide transport system permease protein ebA6658 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 56476733 Common thiG thiazole synthase c1A46 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 56477371 Common - probable transmembrane ABC transporter protein ebA3426 143 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 56477510 Nonpathogen - hypothetical protein ebD78 2 None None None 56476799 Common - hypothetical protein ebA2426 13 None None None 56477762 Common coaE predicted dephospho-CoA kinase ebA4105 202 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 56477463 Common - hypothetical protein ebA3584 79 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 56476421 Common - hypothetical protein ebB53 23 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 56477306 Nonpathogen - hypothetical protein ebA3318 1 None None None 56478945 Common - hypothetical protein ebB218 58 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 56477126 Common - hypothetical protein ebB92 9 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 56476984 Common - Lactonase ebA2753 46 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 56476933 Nonpathogen - hypothetical protein ebA2661 1 None None None 56477286 Nonpathogen - hypothetical protein ebA3285 1 None None None 56479541 Nonpathogen - hypothetical protein ebA7238 1 None None None 56477787 Common mesJ2 predicted ATPase of the PP-loop superfamily implicated in cell cycle control ebA4149 156 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 56478057 Common aldB putative aldehyde dehydrogenase ebA4625 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56477021 Common - cation transport protein ebA2824 120 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 56477395 Common purU formyltetrahydrofolate deformylase ebA3467 214 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 56475611 Nonpathogen - hypothetical protein ebA340 1 None None None 56476506 Common tnp19 transposase ebA1943 34 None None None 56475565 Common tnpF1 putative transposase, fragment ebA246 42 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475839 Common - putative peptidase ebA779 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 56478975 Common - hypothetical protein ebA6193 33 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 56476840 Common lysR transcriptional regulator ebA2490 18 COG0583 LysR, Transcriptional regulator Transcription 56476910 Common - hypothetical protein ebA2621 54 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 56477645 Nonpathogen - fragment of conserved hypothetical protein ebD129 1 None None None 56478448 Common bzdZ putative dehydrogenase ebA5300 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56475562 Nonpathogen - hypothetical protein ebA238 1 None None None 56475599 Common xccC biotin carboxylase subunit of acetyl-CoA carboxylase-like enzyme ebA316 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 56479362 Nonpathogen - hypothetical protein ebD117 1 None None None 56478564 Common istA transposase ebA5492 56 None None None 56476882 Common - hypothetical protein ebA2569 29 COG4446 COG4446, Uncharacterized protein conserved in bacteria Function unknown 56476943 Common istAf transposase, fragment ebA2677 64 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56477361 Common thiL probable thiamine-monophosphate kinase protein ebA3404 177 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 56477970 Common aceA isocitrate lyase ebA4473 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 56479473 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase ebA7119 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 56476316 Common gspH general secretion protein H ebA1616 9 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 56476356 Common - hypothetical protein ebA1702 16 COG3259 FrhA, Coenzyme F420-reducing hydrogenase, alpha subunit Energy production and conversion 56476637 Common - cation efflux system transmembrane protein ebA2168 164 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 56476053 Common - hypothetical protein ebA1174 13 None None None 56476872 Common rnfF protein related to RnfF or ApbE ebA2545 137 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 56476631 Common - hypothetical protein ebA2155 13 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 56475930 Common ubiG 3-demethylubiquinone-9 3-methyltransferase ebA914 180 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 56478060 Common - hypothetical protein ebA4629 8 None None None 56479479 Common rpoE4 RNA polymerase factor sigma-70 ebA7129 36 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 56478883 Common serB phosphoserine phosphatase protein ebA6034 152 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 56475557 Common - putative cation-transporting P-type ATPase ebA224 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 56477675 Common - hypothetical protein ebA3951 53 COG3159 COG3159, Uncharacterized protein conserved in bacteria Function unknown 56477541 Common sbmB methylmalonyl-CoA mutase ebA3738 109 COG1884 Sbm, Methylmalonyl-CoA mutase, N-terminal domain/subunit Lipid metabolism 56479363 Common - putative Mg(2+) transporter ebB238 121 COG1285 SapB, Uncharacterized membrane protein Function unknown 56478426 Nonpathogen - hypothetical protein ebA5267 1 None None None 56477948 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase ebA4439 227 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 56478469 Common - putative TonB-dependent receptor ebA5333 115 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 56478966 Common - hypothetical protein ebA6177 10 None None None 56479316 Common tnpF transposase fragment ebD116 24 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476196 Common - hypothetical protein ebA1403 106 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 56476590 Common - conserved hypothetical protein, possibly involved in molybdenum cofactor biosynthesis ebA2087 113 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 56477779 Common - putative peptidyl-prolyl cis-trans isomerase ebA4137 87 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 56477066 Nonpathogen - hypothetical protein ebA2893 1 None None None 56475554 Nonpathogen - hypothetical protein ebA218 1 None None None 56477551 Common - conserved hypothetical transport protein,predicted major facilitator superfamily ebA3751 93 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 56477414 Common narL DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) ebA3508 203 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 56478627 Nonpathogen - hypothetical protein ebA5605 1 None None None 56477812 Nonpathogen - hypothetical protein ebA4198 1 None None None 56478430 Common - putative acetyltransferase ebA5272 62 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 56478153 Common - serine/threonine-protein kinase ebA4796 155 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 56477982 Common glcD glycolate oxidase (FAD-linked subunit) oxidoreductase protein ebA4490 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56479227 Common traG hypothetical protein ebA6638 21 COG5283 COG5283, Phage-related tail protein Function unknown 56476063 Nonpathogen - hypothetical protein ebA1188 1 None None None 56478287 Common - putative permease component of ABC transporter ebA5015 131 COG4662 TupA, ABC-type tungstate transport system, periplasmic component Coenzyme metabolism 56475473 Nonpathogen - hypothetical protein ebB2 1 None None None 56477590 Common rpsG 30S ribosomal protein S7 ebA3822 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 56477062 Common - predicted uncharacterized protein SCO1/SenC/PrrC,involved in biogenesis of respiratory and photosynthetic systems ebA2886 31 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 56479117 Nonpathogen - hypothetical protein ebA6437 1 None None None 56478891 Common - hypothetical protein ebA6049 6 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 56475968 Common - molybdenum enzyme of unknown function, small subunit, membrane anchor ebA1013 29 COG3301 NrfD, Formate-dependent nitrite reductase, membrane component Inorganic ion transport and metabolism 56479077 Nonpathogen - hypothetical protein ebA6369 1 None None None 56477999 Nonpathogen - hypothetical protein ebA4519 1 None None None 56476594 Common - hypothetical protein ebA2097 46 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 56479421 Common - hypothetical protein ebA7008 65 COG4301 COG4301, Uncharacterized conserved protein Function unknown 56477962 Common tst thiosulfate sulfurtransferase ebA4460 144 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 56476133 Common hisD histidinol dehydrogenase ebA1299 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 56478136 Common trpB tryptophan synthase subunit beta ebA4775 228 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 56477497 Common - putative beta lactamase protein ebA3647 118 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 56476227 Common murG N-acetylglucosaminyl transferase ebA1444 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 56476404 Common queF 7-cyano-7-deazaguanine reductase ebA1782 104 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 56475536 Common norC nitric-oxide reductase subunit C ebB6 37 None None None 56477147 Common mreB ROD shape-determining protein ebA3033 225 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 56477321 Common istB transposition helper protein ebA3338 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56477681 Common menA predicted 1,4-dihydroxy-2-naphthoate octaprenyltransferase ebA3963 95 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 56478833 Common - prevent-host-death family protein ebB209 7 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 56479386 Common - hypothetical protein ebA6930 36 COG3652 COG3652, Predicted outer membrane protein Function unknown 56479412 Common - hypothetical protein ebB244 19 None None None 56476288 Common tnp hypothetical transposase ebA1554 15 None None None 56477852 Common - glycosyl transferase group 1 ebA4266 57 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56479024 Common nosR nosr transcription regulator (N-terminal domain), contains 4Fe-4S cluster ebA6270 78 COG3901 NosR, Regulator of nitric oxide reductase transcription Transcription 56477436 Common paaK aerobic phenylacetate-CoA ligase ebA3545 118 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 56478949 Common - putative TonB-dependent receptor ebA6149 124 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 56476294 Common - hypothetical protein ebA1563 3 COG2456 COG2456, Uncharacterized conserved protein Function unknown 56478323 Common mviN virulence factor MVIN ebA5091 189 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 56476047 Common hemC porphobilinogen deaminase ebA1166 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 56477582 Common nusG transcription antitermination protein NusG ebA3811 215 COG0250 NusG, Transcription antiterminator Transcription 56479082 Common epsT UDP-glucose pyrophosphorylase EpsT ebA6378 233 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 56478494 Common padR PadR protein, putative regulator of anaerobic phenylacetate metabolism ebA5390 35 COG3327 PaaX, Phenylacetic acid-responsive transcriptional repressor Transcription 56476474 Nonpathogen bssF hypothetical protein c2A307 2 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 56479037 Common - hypothetical protein ebA6294 21 COG2461 COG2461, Uncharacterized conserved protein Function unknown 56477566 Common istA transposase ebA3777 83 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479467 Common - hypothetical protein ebA7105 178 COG0628 PerM, Predicted permease General function prediction only 56477586 Common rplL 50S ribosomal protein L7/L12 ebB123 215 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 56478413 Nonpathogen - hypothetical protein ebA5243 1 None None None 56476648 Common crt crotonase ebA2191 187 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56477432 Common paaZ PaaZ protein involved in aerobic phenylacetate metabolism ebA3541 171 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56477924 Common leuS leucyl-tRNA synthetase ebA4386 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 56475540 Common norQ putative chaperone required for activity of nitric oxide reductase (NorQ), member of the AAA+ superfamily of proteins ebA183 76 COG0714 COG0714, MoxR-like ATPases General function prediction only 56477796 Common - cAMP phosphodiesterase class-II:metallo-beta-lactamase superfamily ebA4167 39 COG5212 PDE1, Low-affinity cAMP phosphodiesterase Signal transduction mechanisms 56477913 Common - hypothetical protein ebB149 151 COG1610 COG1610, Uncharacterized conserved protein Function unknown 56476430 Common - hypothetical protein ebB54 20 None None None 56476801 Common ihfB integration host factor beta-subunit (ihf-beta) ebB74 201 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 56476360 Common thiC thiamine biosynthesis protein ThiC ebA1712 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 56479026 Nonpathogen - hypothetical protein, INTERPRO suggestion: probable Aldo/keto reductase ebA6274 1 None None None 56479332 Common - probable periplasmic lipid esterase ebA6814 104 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 56479097 Common iscA IscA protein involved in Fe-S cluster synthesis ebB230 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 56477780 Common - translation-associated GTPase ebA4139 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 56478517 Common - conserved hypothetical protein, with ankyrin-repeat ebA5423 101 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 56479439 Common ppa inorganic diphosphatase ebA7053 188 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 56478851 Common rpsB 30S ribosomal protein S2 ebA5986 227 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 56475897 Common infC translation initiation factor IF-3 ebA870 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 56475801 Common - enoyl-CoA hydratase ebA722 177 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 56476768 Nonpathogen - hypothetical protein ebA2389 2 None None None 56476897 Common - putative composite ATP-binding transmembrane ABC transporter protein ebA2601 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 56477486 Common - hypothetical protein ebA3626 16 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 56477168 Nonpathogen - hypothetical protein ebA3072 3 None None None 56478572 Common tnp42B probable transposase, C-terminal half ebA5506 116 None None None 56479137 Nonpathogen - hypothetical protein ebA6470 1 None None None 56475481 Nonpathogen - hypothetical protein ebA88 1 None None None 56475916 Common cysM cysteine synthase B ebA896 227 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 56476673 Common dhaL aldehyde dehydrogenase ebA2242 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 56475572 Nonpathogen - hypothetical protein ebA265 1 None None None 56476583 Common - L-sorbosone dehydrogenase ebA2073 62 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 56475813 Common bcrD benzoyl CoA reductase subunit ebA744 65 COG1924 COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) Lipid metabolism 56475919 Common - hypothetical protein ebA900 69 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 56476717 Common - acetyl-CoA acetyltransferase ebA2314 181 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 56478589 Nonpathogen - hypothetical protein ebA5537 6 None None None 56478929 Common - transcriptional regulator, LysR family ebA6111 188 COG0583 LysR, Transcriptional regulator Transcription 56478453 Common - putative ABC-transporter ebA5307 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 56475628 Common - single-strand DNA-binding protein ebB10 9 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 56477025 Common - hypothetical protein ebA2832 25 None None None 56478017 Nonpathogen - hypothetical protein ebA4557 1 None None None 56479282 Nonpathogen - hypothetical protein ebA6720 1 None None None 56478895 Common - probable thioredoxin-like protein ebA6064 14 None None None 56478957 Common eno phosphopyruvate hydratase ebA6162 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 56477335 Common - hypothetical protein ebA3357 12 None None None 56475854 Nonpathogen - hypothetical protein ebA800 2 COG3756 COG3756, Uncharacterized protein conserved in bacteria Function unknown 56479231 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein ebA6645 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 56478531 Common rne ribonuclease E (RNase E) ebA5441 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 56479217 Common - hypothetical protein ebD17 4 None None None 56478020 Common gltJ putative ABC transporter protein, probable glutamate/aspartate transmembrane subunit ebA4564 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 56479143 Common - hypothetical protein ebA6485 41 None None None 56476570 Common fcs putative ADP-producing CoA ligase, similar to feruloyl-CoA synthetase ebA2050 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 56477882 Common - CoA ligase, possible involved in capsular antigen synthesis (related to CapK protein) ebA4317 112 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 56478236 Nonpathogen - hypothetical protein ebA4919 1 None None None 56479058 Common vsr very short patch repair protein (DNA mismatch endonuclease) ebB227 71 COG3727 Vsr, DNA G:T-mismatch repair endonuclease DNA replication, recombination, and repair 56478903 Common - predicted short chain dehydrogenase ebA6075 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56475446 Common int phage integrase ebA29 64 None None None 56478111 Common adh short-chain dehydrogenase/reductase, possibly involved in polyhydroxybutyrate (PHB) synthesis ebA4731 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 56476989 Common boxR anaerobic benzoate catabolism transcriptional regulator ebA2762 193 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 56477016 Common ampG muropeptide transporter ebA2813 110 None None None 56479444 Common - hypothetical protein ebA7065 21 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 56478795 Common - probable sugar transferase, WBGY ebA5903 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 56477009 Common - hypothetical protein ebA2797 61 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 56475699 Common tnp9B transposase, is4 family, fragment ebB14 60 None None None 56475518 Common - hypothetical protein ebA152 131 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 56475985 Common thiF adenylyltransferase ebA1046 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 56479178 Common pdc probable phenylpyruvate decarboxylase ebA6545 221 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 56476147 Common - conserved hypothetical protein, KpsF/GutQ family ebA1315 179 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 56476235 Common - hypothetical protein ebB43 138 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 56476866 Common - putative ABC transporter ATP-binding protein ebA2533 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 56477366 Common - hypothetical protein ebA3413 16 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 56476232 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diami no-pimelate ligase ebA1450 211 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 56478032 Common - hypothetical protein ebA4585 17 COG3945 COG3945, Uncharacterized conserved protein Function unknown 56478079 Common guaD guanine deaminase ebA4668 166 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 56475682 Nonpathogen - hypothetical protein ebA488 1 None None None 56476976 Nonpathogen - fragment of resolvase protein ebD67 1 None None None 56478489 Common - FAD dependent oxidase ebA5380 160 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 56476284 Nonpathogen - hypothetical protein ebA1549 3 None None None 56478334 Common cpx cytochrome c peroxidase ebA5105 32 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 56479519 Common - hypothetical protein ebA7200 16 None None None 56478747 Common - hypothetical protein ebA5829 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 56478830 Nonpathogen - hypothetical protein ebA5955 1 None None None 56478483 Common dctM conserved hypothetical protein, predicted TRAP C4-dicarboxylate transport system permease DctM subunit,DedA falily ebA5367 122 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 56476835 Common tnp23 transposase, is4 family ebA2478 42 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 56479015 Nonpathogen - hypothetical protein ebA6259 1 None None None 56476222 Common ftsZ cell division protein FtsZ ebA1438 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 56479521 Common revT2 reverse transcriptase/retron type ebA7202 85 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 56476267 Common - probable: Putative GlcNAc transferase ebA1516 215 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56479275 Common - putative mechanosensitive channel protein ebA6709 195 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 56476442 Nonpathogen - hypothetical protein ebD42 1 None None None 56475998 Common bioC biotin synthesis protein ebA1067 92 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 56478727 Common ebdD2 ethylbenzene dehydrogenase, chaperone ebA5795 7 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 56475740 Common - inorganic pyrophosphatase ebA594 10 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 56478365 Common hemN coproporphyrinogen III oxidase ebA5151 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 56475976 Common pmbA Zn-dependent protease, modulator of DNA gyrase ebA1031 158 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 56478633 Common s5h putative salicylate monooxygenase ebA5612 81 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 56477898 Common - hypothetical protein ebB147 71 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 56477977 Common - putative cold-shock protein ebC12 182 COG1278 CspC, Cold shock proteins Transcription 56478823 Common istA transposase ebA5947 69 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 56475603 Nonpathogen - hypothetical protein ebA322 1 None None None 56477548 Common - predicted putative neutral zinc metallopeptidase ebA3747 86 COG2321 COG2321, Predicted metalloprotease General function prediction only 56479327 Common - ABC transporter, ATP-binding protein ebA6806 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 56479067 Common - hypothetical protein ebA6350 16 COG1496 COG1496, Uncharacterized conserved protein Function unknown 56475946 Common - hypothetical protein ebA964 5 None None None 56478351 Common ccoO cytochrome-cbb3 oxidase, subunit II ebA5132 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 56475673 Common istB transposase ebA466 151 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 56476641 Common - hypothetical protein ebB64 19 None None None 56477055 Nonpathogen - hypothetical protein ebA2872 1 None None None 56476890 Common rnfE SoxR-reducing system protein RsxE ebA2585 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 56477879 Common - hypothetical protein ebA4312 9 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 56478116 Common hbdA 3-hydroxybutyryl-CoA dehydrogenase ebA4742 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 56478475 Common tnp41 transposase (IS4), fragment ebA5346 29 COG5433 COG5433, Transposase DNA replication, recombination, and repair 56476847 Nonpathogen - hypothetical protein ebA2504 1 None None None 56477629 Common - hypothetical protein ebA3865 84 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 56479165 Common - possible ABC transport permease ebA6524 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 56478718 Common - sugar phosphatase of the HAD superfamily ebA5780 16 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 56478615 Common - glycosyl transferase, group 1 family protein ebA5581 204 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 56475909 Nonpathogen - hypothetical protein ebA887 1 None None None 56476858 Common - hypothetical protein ebA2520 21 None None None 56478412 Common istB transposition helper protein ebA5242 95 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 56478682 Common - two-component system sensor kinase ebA5715 152 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 56476990 Common boxC enoyl-CoA hydratase ebA2763 21 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism