Burkholderia pseudomallei K96243 chromosome 2, complete sequence NC_006351 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 53723042 Common - zinc-containing alcohol dehydrogenase BPSS2024 203 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53721909 Common pmlI N-acylhomoserine lactone synthase BPSS0885 27 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 53721578 Common - glycosyl hydrolase BPSS0542 52 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 53721882 Common - hypothetical protein BPSS0855 12 None None None 53722629 Pathogen - hypothetical protein BPSS1606 1 None None None 53722580 Common - LysR-family transcriptional regulator BPSS1559 179 COG0583 LysR, Transcriptional regulator Transcription 53721305 Common - LysR-family transcriptional regulator BPSS0270 180 COG0583 LysR, Transcriptional regulator Transcription 53721933 Common - OmpA family protein BPSS0909 106 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 53721576 Common - outer membrane efflux protein BPSS0540 93 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53721729 Common - zinc-binding dehydrogenase BPSS0700 78 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 53723199 Common - glycosyl transferase BPSS2182 191 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53721582 Common - AraC family regulatory protein BPSS0546 101 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721722 Common - fumarylacetoacetate (FAA) hydrolase family protein BPSS0693 181 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 53721625 Common pchH ATP-binding component of ABC transporter BPSS0589 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 53723289 Common bkdB branched-chain alpha-keto acid dehydrogenase subunit E2 BPSS2271 194 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 53722201 Common - non-ribosomal peptide/polyketide synthase protein BPSS1173 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723294 Common - LysR family regulatory protein BPSS2276 160 COG0583 LysR, Transcriptional regulator Transcription 53722919 Common fadH 2,4-dienoyl-CoA reductase (NADPH) BPSS1898 209 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 53721416 Common - hypothetical protein BPSS0380A 2 None None None 53721589 Common - electron transfer flavoprotein beta-subunit BPSS0553 10 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 53722930 Common - hypothetical protein BPSS1909 31 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 53721981 Common - hypothetical protein BPSS0958 61 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53721235 Common - penicillin amidase BPSS0200 73 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 53721854 Pathogen - hypothetical protein BPSS0828 1 None None None 53722633 Common - AraC-family transcriptional regulator BPSS1610 38 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722300 Common - oxidoreductase BPSS1278 10 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 53721520 Common - beta-ketoacyl-ACP synthase BPSS0483 196 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 53723341 Common - permease BPSS2324 133 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 53723012 Common - hypothetical protein BPSS1991 61 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 53721595 Common - LysR family regulatory protein BPSS0559 128 COG0583 LysR, Transcriptional regulator Transcription 53722027 Common - polyketide synthase BPSS1006 212 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723312 Common - taurine catabolism dioxygenase TauD, TfdA family protein BPSS2294 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53723240 Common - hypothetical protein BPSS2223 27 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 53722883 Common - AraC-family regulatory protein BPSS1864 116 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721455 Pathogen - hypothetical protein BPSS0416A 1 None None None 53721562 Common - hypothetical protein BPSS0526 32 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 53722628 Common - probable two-component system sensor kinase BPSS1605 66 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53722572 Common - Type III secretion system protein BPSS1551 4 None None None 53722892 Common - chemotaxis-related protein BPSS1872 6 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 53721149 Common - hypothetical protein BPSS0113 16 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 53721746 Common - hypothetical protein BPSS0717 9 COG3447 COG3447, Predicted integral membrane sensor domain Signal transduction mechanisms 53723105 Common - DNA-binding protein BPSS2090 3 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 53721275 Common - hemin ABC transport system, membrane protein BPSS0241 183 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 53721516 Common - ribonucleotide reductase protein BPSS0479 220 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 53721538 Common - GntR family regulatory protein BPSS0502 181 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53722864 Common - endonuclease/exonuclease/phosphatase family protein BPSS1845 47 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 53722587 Common - probable phosphate transporter BPSS1566 144 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 53721717 Common - response regulator protein BPSS0688 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723345 Common - multi-domain beta keto-acyl synthase BPSS2328 236 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722855 Common - hypothetical protein BPSS1836 36 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 53721041 Common - integrase BPSS0002 22 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 53721142 Pathogen - hypothetical protein BPSS0104 1 None None None 53722988 Common - TetR-family regulatory protein BPSS1967 9 COG1309 AcrR, Transcriptional regulator Transcription 53722351 Common - hypothetical protein BPSS1326 86 COG1432 COG1432, Uncharacterized conserved protein Function unknown 53721200 Common - quinone oxidoreductase BPSS0164 175 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 53721048 Common - hypothetical protein BPSS0009 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 53722017 Common - Rieske iron-sulphur domain protein BPSS0996 74 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53721453 Common - lipoprotein BPSS0415 21 None None None 53722597 Common - hypothetical protein BPSS1576 18 None None None 53722924 Common benA benzoate 1,2-dioxygenase alpha subunit BPSS1903 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53721979 Common - hypothetical protein BPSS0956 27 COG1737 RpiR, Transcriptional regulators Transcription 53722927 Common benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase BPSS1906 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722533 Common - hypothetical protein BPSS1511 44 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 53722771 Common - hypothetical protein BPSS1750 49 None None None 53722236 Common - hypothetical protein BPSS1213 47 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53722461 Common - membrane-anchored cell surface protein BPSS1434 27 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 53722169 Pathogen - hypothetical protein BPSS1141 2 None None None 53721569 Pathogen - hypothetical protein BPSS0533 2 None None None 53722530 Common - hypothetical protein BPSS1508 5 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 53722721 Common truA tRNA pseudouridine synthase A BPSS1701 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 53721554 Common - hypothetical protein BPSS0518 21 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 53722073 Pathogen - hypothetical bacteriophage protein BPSS1048c 1 None None None 53721112 Common - ABC transport system, membrane protein BPSS0075 176 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 53721552 Common - hypothetical protein BPSS0516 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 53722307 Pathogen - hypothetical protein BPSS1284 1 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 53722565 Common bsaP Type III secretion system protein BPSS1544 7 None None None 53721894 Common - amino acid permease BPSS0870 145 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 53722318 Common - hypothetical protein BPSS1294 45 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 53722648 Pathogen - type III secretion protein BPSS1625 1 None None None 53722521 Common - hypothetical protein BPSS1499 10 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 53722526 Common - hypothetical protein BPSS1504 50 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 53721980 Pathogen - hypothetical protein BPSS0957 1 None None None 53722314 Pathogen - hypothetical protein BPSS1290 1 None None None 53722550 Common bipD membrane antigen BPSS1529 5 None None None 53721493 Common - exported copper oxidase BPSS0456 132 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 53722939 Common - alcohol dehydrogenase BPSS1918 201 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 53721703 Pathogen - hypothetical protein BPSS0674 1 None None None 53721944 Common - LysR family regulatory protein BPSS0920 191 COG0583 LysR, Transcriptional regulator Transcription 53721105 Common - hypothetical protein BPSS0065 6 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 53722468 Common - biotin carboxylase BPSS1445 233 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 53723274 Common - haloacid dehalogenase-like hydrolase BPSS2256 120 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 53723181 Common - hypothetical protein BPSS2165 209 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53722197 Common - hypothetical protein BPSS1169 37 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 53723131 Common - hypothetical protein BPSS2117A 5 None None None 53723051 Common - enoyl-CoA hydratase/isomerase BPSS2033 27 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53721060 Common - iron transport/utilisation related protein BPSS0021 64 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 53721120 Common - hypothetical protein BPSS0081 132 COG0432 COG0432, Uncharacterized conserved protein Function unknown 53723265 Common - hypothetical protein BPSS2247 3 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 53721479 Common - hypothetical protein BPSS0441 102 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 53722040 Common - fumarylpyruvate hydrolase BPSS1019 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 53722371 Common - subfamily S9A unassigned peptidase BPSS1346 106 COG1505 COG1505, Serine proteases of the peptidase family S9A Amino acid transport and metabolism 53721252 Common - LysR-family transcriptional regulator BPSS0217 90 COG0583 LysR, Transcriptional regulator Transcription 53721428 Common - hypothetical protein BPSS0390 42 COG1724 COG1724, Predicted periplasmic or secreted lipoprotein Cell motility and secretion 53721893 Common - hypothetical protein BPSS0869 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 53722333 Common - RpiR family regulatory protein BPSS1309 93 COG1737 RpiR, Transcriptional regulators Transcription 53721559 Common - hypothetical protein BPSS0523 62 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53722243 Common araF L-arabinose-binding periplasmic protein precursor BPSS1220 20 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53723092 Common - senescence marker protein-30 (SMP-30) family protein BPSS2074 73 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 53722556 Common bsaY surface presentation of antigens protein BPSS1535 87 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 53723119 Common - hypothetical protein BPSS2105 144 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 53723081 Pathogen - hypothetical protein BPSS2063a 1 None None None 53721635 Pathogen - hypothetical protein BPSS0599 1 None None None 53722744 Common - lyase BPSS1723 40 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 53722957 Common - outer membrane efflux protein BPSS1936 119 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53721365 Common - amino-acid permease membrane protein BPSS0330 187 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 53722143 Common - hypothetical protein BPSS1115 11 None None None 53721238 Pathogen - lipoprotein BPSS0203 1 None None None 53721753 Common - short-chain dehydrogenase BPSS0725 234 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721531 Common - nitroreductase family protein BPSS0495 81 COG0778 NfnB, Nitroreductase Energy production and conversion 53723321 Common - hypothetical protein BPSS2303 19 COG1306 COG1306, Uncharacterized conserved protein Function unknown 53722056 Pathogen - hypothetical protein BPSS1035 1 None None None 53721783 Common - porin protein BPSS0757 35 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722129 Common - hypothetical protein BPSS1101 11 None None None 53721816 Common - short chain dehydrogenase BPSS0792 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721818 Common - short chain dehydrogenase BPSS0794 234 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722216 Common - 1-aminocyclopropane-1-carboxylate deaminase BPSS1191 53 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 53721900 Common - GNAT family acetyltransferase BPSS0876 27 COG3153 COG3153, Predicted acetyltransferase General function prediction only 53723247 Common - hypothetical protein BPSS2229 159 COG0517 COG0517, FOG: CBS domain General function prediction only 53721077 Common - serine acetyltransferase BPSS0038 192 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 53722285 Common - hypothetical protein BPSS1263 91 COG5283 COG5283, Phage-related tail protein Function unknown 53723138 Common - LysR family transcriptional regulator BPSS2124 112 COG0583 LysR, Transcriptional regulator Transcription 53722422 Common sctL type III secretion system protein BPSS1395 14 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 53721967 Common - porin protein BPSS0943 31 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721564 Common - hypothetical protein BPSS0528 17 None None None 53721788 Common - transporter protein BPSS0762 77 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53722903 Common - acetyltransferase BPSS1882 4 COG0456 RimI, Acetyltransferases General function prediction only 53721686 Common - hypothetical protein BPSS0652 30 COG4094 COG4094, Predicted membrane protein Function unknown 53723126 Common - hypothetical protein BPSS2113 3 None None None 53723099 Common - ABC transporter, permease protein BPSS2083 173 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 53722678 Common bglB beta-glucosidase BPSS1657 94 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 53723047 Common - acyl-CoA dehydrogenase BPSS2029 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53722553 Common bipB cell invasion protein BPSS1532 5 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 53721991 Common - hypothetical protein BPSS0968 55 COG3781 COG3781, Predicted membrane protein Function unknown 53723006 Pathogen - hypothetical protein BPSS1985 1 None None None 53721166 Common - peptide synthase protein BPSS0130 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722297 Common - RNA polymerase sigma factor BPSS1275 152 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 53721345 Common - hypothetical protein BPSS0310 9 COG2940 COG2940, Proteins containing SET domain General function prediction only 53722443 Common - hypothetical protein BPSS1416 56 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 53722272 Common - lipoprotein BPSS1249 3 None None None 53723337 Common - 4'-phosphopantetheinyl transferase superfamily protein BPSS2320 53 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 53721776 Common - amino acid permease BPSS0750 117 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 53722725 Common leuB 3-isopropylmalate dehydrogenase BPSS1705 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 53722905 Common - hypothetical protein BPSS1884 214 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 53721656 Common mmsB 3-hydroxyisobutyrate dehydrogenase BPSS0620 169 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 53722796 Common amn AMP nucleosidase BPSS1777 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 53722676 Pathogen - hypothetical protein BPSS1655 1 None None None 53721662 Common - luciferase-like monooxygenase BPSS0626 90 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53722829 Common ilvE branched-chain amino acid aminotransferase BPSS1810 218 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 53721242 Common prpC methylcitrate synthase BPSS0207 194 COG0372 GltA, Citrate synthase Energy production and conversion 53722691 Common - ABC transport system, ATP-binding protein BPSS1671 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 161723219 Common - x-prolyl-dipeptidyl aminopeptidase BPSS0654 26 COG2936 COG2936, Predicted acyl esterases General function prediction only 53721736 Common - hypothetical protein BPSS0707 47 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 53722949 Common - hypothetical protein BPSS1928 43 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 53722820 Common - hypothetical transposon protein BPSS1801 10 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722783 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase BPSS1762 222 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 53721748 Common - family C56 unassigned peptidase BPSS0719 111 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 53722714 Pathogen - hypothetical protein BPSS1694 1 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 53721177 Common - sugar ABC transport system, membrane protein BPSS0141 111 COG4158 COG4158, Predicted ABC-type sugar transport system, permease component General function prediction only 53721829 Pathogen - hypothetical protein BPSS0804 1 None None None 53722463 Common - hypothetical protein BPSS1438 32 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 53722033 Common - voltage-gated clc-type chloride channel BPSS1012 86 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 53721826 Common - hypothetical protein BPSS0801 19 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 53721540 Common - hypothetical protein BPSS0504 19 COG1289 COG1289, Predicted membrane protein Function unknown 53723229 Common - hypothetical protein BPSS2212 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 53722651 Pathogen - type III secretion protein BPSS1628 1 None None None 53721690 Pathogen - hypothetical protein BPSS0656 1 None None None 53723173 Common - Acyl-CoA transferase/carnitine dehydratase protein BPSS2157 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 53721403 Common - TonB-like transport protein BPSS0368 10 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 53722873 Common - short chain dehydrogenase BPSS1854 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721807 Common - outer membrane porin protein BPSS0783 17 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721764 Pathogen - DNA-binding protein BPSS0738 1 None None None 53722325 Common pcaG protocatechuate 3,4-dioxygenase alpha chain BPSS1301 38 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 53722976 Common - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase BPSS1955 136 COG0280 Pta, Phosphotransacetylase Energy production and conversion 53723157 Common oppA periplasmic oligopeptide-binding protein precursor BPSS2141 206 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 53722383 Common - sensor kinase protein BPSS1358 210 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 53722662 Common - citrate lyase beta chain BPSS1639 106 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 53722389 Common cspD cold shock-like protein BPSS1364 181 COG1278 CspC, Cold shock proteins Transcription 53722195 Common - thioesterase BPSS1167 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53721699 Common - transporter protein BPSS0670 193 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53723068 Pathogen - DNA-binding protein BPSS2051 2 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722127 Common - hypothetical protein BPSS1099 3 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 53722615 Common - type III secretion system protein BPSS1592 136 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 53721907 Common ribA GTP cyclohydrolase II BPSS0883 197 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 53722684 Common selA selenocysteine synthase BPSS1663 76 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 53722475 Common - hypothetical protein BPSS1454 11 None None None 53721378 Common - aminotransferase protein BPSS0343 115 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 53721444 Pathogen - hypothetical protein BPSS0406 1 None None None 53722594 Common tauB ATP-binding component of taurine ABC transporter BPSS1573 249 COG4525 TauB, ABC-type taurine transport system, ATPase component Inorganic ion transport and metabolism 53721322 Common selD selenophosphate synthetase BPSS0287 110 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 53722221 Common - SyrP-like protein BPSS1196 22 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53721615 Common braG high-affinity branched-chain amino acid transport ATP-binding protein BPSS0579 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 53722005 Common hisM histidine transport system permease protein BPSS0982 169 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 53722241 Common - methyl-accepting chemotaxis protein BPSS1218 142 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53721523 Common - non-ribosomal peptide synthetase BPSS0486 212 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722736 Common gltA type II citrate synthase BPSS1715 194 COG0372 GltA, Citrate synthase Energy production and conversion 53721709 Common - AraC family regulatory protein BPSS0681 124 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721488 Common - family S11 unassigned peptidase BPSS0451 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 53721674 Common - glutathione S-transferase BPSS0640 66 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 53723088 Common - branched-chain amino acid transport system permease BPSS2070 123 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 53721047 Common - TetR-family regulatory protein BPSS0008 86 COG1309 AcrR, Transcriptional regulator Transcription 53721199 Common asnO asparagine synthetase (glutamine-hydrolyzing) BPSS0163 149 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 53721814 Common - hydrolase C-terminus BPSS0790 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 53721098 Common - hypothetical protein BPSS0059 10 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 53721434 Pathogen - bacteriophage protein Gp48 BPSS0397 1 None None None 53721093 Common chrB chromate resistance exported protein BPSS0054 31 COG4275 COG4275, Uncharacterized conserved protein Function unknown 53722830 Common - transferase BPSS1811 70 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 53722483 Common - hypothetical protein BPSS1462 14 COG5591 COG5591, Uncharacterized conserved protein Function unknown 53723023 Common - conserved periplasmic protein BPSS2003 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 53722172 Common - hydrogenase 4 subunit F BPSS1144 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 53722134 Common - thymidylate synthase protein BPSS1106 18 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 53722107 Common - bacteriophage baseplate assembly protein J BPSS1080 37 COG3948 COG3948, Phage-related baseplate assembly protein General function prediction only 53723074 Common - IS element transposase BPSS2057 70 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 53723076 Common - hypothetical protein BPSS2059 180 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 53722579 Common kgtP alpha-ketoglutarate permease BPSS1558 124 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722757 Common - ABC transport system, membrane protein BPSS1736 185 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 53723353 Common glnP glutamine ABC transporter permease protein BPSS2336 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 53723008 Common - phosphesterase BPSS1987 5 COG1409 Icc, Predicted phosphohydrolases General function prediction only 53721261 Common - lipoprotein BPSS0226 37 COG5361 COG5361, Uncharacterized conserved protein Function unknown 53722773 Common - transport-related, membrane protein BPSS1752 25 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 53721847 Common - hypothetical protein BPSS0821 6 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 53721720 Common - MarR family regulator protein BPSS0691 76 COG1846 MarR, Transcriptional regulators Transcription 53722819 Common - dehydrogenase BPSS1800 116 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 53723034 Common wecB UDP-N-acetylglucosamine 2-epimerase BPSS2016 157 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 53721702 Common - cytochrome c oxidase subunit III protein BPSS0673 149 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 53722328 Common - ABC transport system permease protein BPSS1304 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 53721501 Common potI putrescine transport system permease protein BPSS0464 200 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 53722458 Common - hypothetical protein BPSS1431 25 None None None 53722810 Common - hypothetical protein BPSS1791 34 None None None 53722130 Common - hypothetical protein BPSS1102 47 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 53722187 Common narG respiratory nitrate reductase subunit BPSS1159 116 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 53722512 Common - N-acetylmuramoyl-L-alanine amidase BPSS1490 105 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 53722353 Common - GntR-family transcriptional regulator BPSS1328 111 COG2188 PhnF, Transcriptional regulators Transcription 53722707 Common - hypothetical protein BPSS1687 54 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 53723364 Common - RNA polymerase sigma factor BPSS2347 22 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 53723222 Common - hypothetical protein BPSS2205 32 COG5476 COG5476, Uncharacterized conserved protein Function unknown 53722098 Common - bacteriophage-acquired protein BPSS1072 18 COG3409 COG3409, Putative peptidoglycan-binding domain-containing protein Cell envelope biogenesis, outer membrane 53721192 Common - short chain dehydrogenase BPSS0156 181 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722969 Common atpE ATP synthase C chain BPSS1948 64 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 53721123 Common - hypothetical protein BPSS0085 7 COG5488 COG5488, Integral membrane protein Function unknown 53721889 Common - hypothetical protein BPSS0865 4 None None None 53721181 Common dbpA ATP-dependent RNA helicase DbpA BPSS0145 231 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 53723160 Pathogen - hypothetical protein BPSS2144 1 None None None 53721363 Common - malate/L-lactate dehydrogenase BPSS0328 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 53722345 Pathogen - hypothetical protein BPSS1320 2 None None None 53721607 Pathogen - hypothetical protein BPSS0571 1 None None None 53721399 Common - chromosome condensation protein BPSS0364 147 COG1741 COG1741, Pirin-related protein General function prediction only 53721469 Common - LysR-family transcriptional regulator BPSS0431 177 COG0583 LysR, Transcriptional regulator Transcription 53721832 Common aroP aromatic amino acid transport protein BPSS0807 176 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 53721547 Common - hypothetical protein BPSS0511 14 COG0392 COG0392, Predicted integral membrane protein Function unknown 53721823 Pathogen - hypothetical protein BPSS0798 1 None None None 53722547 Common bapC invasion protein BPSS1526 41 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 53721931 Common - transport protein BPSS0907 186 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53721359 Common glcA glycolate permease BPSS0324 104 COG1620 LldP, L-lactate permease Energy production and conversion 53721974 Common - ABC transporter system, ATP-binding protein BPSS0951 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 53722068 Common - hypothetical bacteriophage protein BPSS1047 8 COG1395 COG1395, Predicted transcriptional regulator Transcription 53721138 Common - hypothetical protein BPSS0100 22 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 53721283 Common - ABC transport system, substrate-binding exported protein BPSS0249 76 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 53722155 Pathogen - glyoxylase/bleomycin resistance protein/dioxygenase superfamily protein BPSS1127 1 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 53721793 Pathogen - hypothetical protein BPSS0767 1 None None None 53722436 Pathogen - hypothetical protein BPSS1409 1 None None None 53722457 Common - ArsR family regulatory protein BPSS1430 67 COG0640 ArsR, Predicted transcriptional regulators Transcription 53722491 Common - hypothetical protein BPSS1469a 5 None None None 53723203 Pathogen - pilus subunit protein BPSS2186 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 53723112 Common - hypothetical protein BPSS2098 24 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 53723236 Common - lipoprotein BPSS2219 4 None None None 53722396 Common sdaB L-serine dehydratase BPSS1370 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 53721381 Common - ABC transport system, membrane protein BPSS0346 215 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 53721511 Common speB agmatinase BPSS0474 155 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 53721144 Common - hypothetical protein BPSS0108 5 None None None 53721210 Common - chaperone BPSS0174 214 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 53722812 Common - hypothetical protein BPSS1793 77 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 53721870 Common - hypothetical protein BPSS0844 8 None None None 53721053 Common - glutathione S-transferase like protein BPSS0014 107 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 53721311 Common aer aerotaxis receptor BPSS0276 152 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53721864 Common - universal stress protein BPSS0838 100 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53721414 Pathogen - hypothetical protein BPSS0379 1 None None None 53721086 Common pcaC 4-carboxymuconolactone decarboxylase BPSS0047 89 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 53721303 Pathogen - hypothetical protein BPSS0268A 1 None None None 53721996 Common mgtB Mg(2+) transport ATPase, P-type 2 BPSS0973 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 53722589 Common - probable AMP-binding rotein BPSS1568 221 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721471 Common - hypothetical protein BPSS0433 23 COG3619 COG3619, Predicted membrane protein Function unknown 53722279 Common - CoA transferase family protein BPSS1257 114 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 53721276 Common - hemin transport system, substrate-binding protein BPSS0242 64 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 53721297 Pathogen - hypothetical protein BPSS0263 1 None None None 53721228 Common - hypothetical protein BPSS0193 34 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 53721486 Common - GntR-family regulatory protein BPSS0449 168 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53721496 Pathogen - copper-resistance membrane protein BPSS0459 1 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 53722544 Common bicP chaperone BPSS1523 3 None None None 53723282 Common - dehydrogenase BPSS2264 169 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 53723329 Common - family U62 unassigned peptidas BPSS2311 15 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 53721233 Common - hypothetical protein BPSS0198 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 53722631 Common - hypothetical protein BPSS1608 6 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 53722120 Common - hypothetical protein BPSS1092 23 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 53722311 Common - outer membrane efflux protein BPSS1287 109 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53722986 Common - glutathione S-transferase protein BPSS1965 104 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 53722857 Common - ferredoxin BPSS1838 95 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 53723108 Common - Clp protease ATPase BPSS2094 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 53721719 Common - hypothetical protein BPSS0690 16 COG3320 COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 53721856 Common - DNA-binding protein BPSS0830 74 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 53722574 Pathogen - hypothetical protein BPSS1553 5 COG3710 CadC, DNA-binding winged-HTH domains Transcription 53722247 Common - hypothetical protein BPSS1224 17 COG4257 Vgb, Streptogramin lyase Defense mechanisms 53722228 Common pyrB aspartate carbamoyltransferase BPSS1203 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 53722778 Common - hypothetical protein BPSS1757 149 COG1610 COG1610, Uncharacterized conserved protein Function unknown 53722287 Common - hypothetical protein BPSS1265 9 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 53723304 Common - hypothetical protein BPSS2286 111 COG0517 COG0517, FOG: CBS domain General function prediction only 53723158 Common - MerR family transcriptional regulator BPSS2142 127 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 53723107 Common - hypothetical protein BPSS2093 62 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53721355 Common - GntR-family transcriptional regulator BPSS0320 141 COG2186 FadR, Transcriptional regulators Transcription 53721107 Common - phospholipase C precursor BPSS0067 34 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 53721593 Common - hypothetical protein BPSS0557 90 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 53721442 Common - methylamine utilization protein BPSS0404 88 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 53723144 Common - acetyl-CoA synthetase BPSS2130 144 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 53721620 Common pchD salicyl-AMP ligase BPSS0584 223 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 53721965 Common - hypothetical protein BPSS0941 77 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 53722110 Common - bacteriophage-acquired protein BPSS1083 5 None None None 53722640 Common - type III secretion system protein BPSS1617 128 COG4790 EscR, Type III secretory pathway, component EscR Intracellular trafficking and secretion 53721457 Common - transport-related membrane protein BPSS0418 24 COG3524 KpsE, Capsule polysaccharide export protein Cell envelope biogenesis, outer membrane 53721460 Common rfbH lipopolysaccharide biosynthesis protein (O-antigen-related) BPSS0421 196 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 53721896 Common - AraC family regulatory protein BPSS0872 78 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53722360 Common - hypothetical protein BPSS1335 10 None None None 53722535 Pathogen - hypothetical protein BPSS1513 1 None None None 53721069 Common - chromosome replication initiation inhibitor protein BPSS0030 97 COG0583 LysR, Transcriptional regulator Transcription 53721491 Pathogen - hypothetical protein BPSS0454 1 None None None 53722025 Common - acyl transferase BPSS1004 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 53721861 Common - response regulator protein BPSS0835 217 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53721964 Common - ornithine cyclodeaminase BPSS0940 70 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 53722607 Common hipA regulatory protein BPSS1584 53 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 53721911 Common pmlR N-acylhomoserine lactone dependent regulatory protein BPSS0887 124 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53721580 Common - LacI family regulatory protein BPSS0544 126 COG1609 PurR, Transcriptional regulators Transcription 53723268 Common - sigma-54 interacting transcriptional regulator BPSS2250 172 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 53721727 Common hpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase BPSS0698 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 53721300 Common - hypothetical protein BPSS0266 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 53723334 Common - hypothetical protein BPSS2317 6 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 53721587 Common - hypothetical protein BPSS0551 88 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 53721712 Common - hypothetical protein BPSS0684 133 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53723019 Common - lipoprotein BPSS1998 43 COG3391 COG3391, Uncharacterized conserved protein Function unknown 53723296 Common - hypothetical protein BPSS2278 33 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 53723186 Common - hypothetical protein BPSS2170 17 COG3805 DodA, Aromatic ring-cleaving dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53722687 Common fdoH formate dehydrogenase-O, iron-sulfur subunit BPSS1666 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 53722264 Common - bifunctional reductase BPSS1241 204 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 53722669 Common - probable two-component response regulator BPSS1648 184 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 53722839 Common - hypothetical protein BPSS1820 31 None None None 53722827 Common mhpF acetaldehyde dehydrogenase BPSS1808 37 COG4569 MhpF, Acetaldehyde dehydrogenase (acetylating) Secondary metabolites biosynthesis, transport, and catabolism 53722658 Common - probable class III aminotransferase BPSS1635 238 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 53723263 Common - epimerase BPSS2245 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53722614 Pathogen - hypothetical protein BPSS1591 1 None None None 53723314 Common - transport protein BPSS2296 190 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722145 Common - hypothetical protein BPSS1117 53 COG2345 COG2345, Predicted transcriptional regulator Transcription 53721292 Common - short chain dehydrogenase BPSS0258 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722917 Common cyoB ubiquinol oxidase polypeptide I BPSS1896 172 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 53721119 Common - hypothetical protein BPSS0080a 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 53723010 Common - hypothetical protein BPSS1989 12 None None None 53721544 Common - thiamine pyrophosphate enzyme BPSS0508 35 COG4032 COG4032, Predicted thiamine-pyrophosphate-binding protein General function prediction only 53721347 Common - LuxR-family transcriptional regulator BPSS0312 84 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 53721405 Common - glutamate racemase BPSS0370 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 53722424 Common sctJ type III secretion associated protein BPSS1397 51 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 53722185 Common narJ respiratory nitrate reductase subunit BPSS1157 54 COG2180 NarJ, Nitrate reductase delta subunit Energy production and conversion 53722477 Pathogen - hypothetical protein BPSS1456 1 None None None 53721993 Common - GntR family regulatory protein BPSS0970 218 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53721168 Common - hypothetical protein BPSS0132 16 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 53722626 Common - secretion protein BPSS1603 7 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 53722869 Common - hypothetical protein BPSS1850 96 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 53722950 Common - outer membrane lipoprotein BPSS1929 102 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53721985 Common - extracellular serine protease precursor BPSS0962 41 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 53722031 Common - halogenase BPSS1010 28 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 53721798 Pathogen - hypothetical protein BPSS0771 1 None None None 53723124 Common - hypothetical protein BPSS2110 9 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 53722693 Common - hypothetical protein BPSS1673 111 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53721335 Common - malonyl CoA-acyl carrier protein BPSS0300 206 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 53721071 Common - universal stress-related protein BPSS0032 148 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53723116 Common - protein kinase BPSS2102 139 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 53722054 Common - ABC periplasmic-binding sugar transport protein BPSS1033 81 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53721557 Common - hypothetical protein BPSS0521 21 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 53722441 Common - GntR family transcriptional regulator BPSS1414 106 COG2186 FadR, Transcriptional regulators Transcription 53722997 Common - hypothetical protein BPSS1976 3 None None None 53722210 Pathogen - acyl carrier protein BPSS1182 1 None None None 53722167 Common - hypothetical protein BPSS1139 20 COG4309 COG4309, Uncharacterized conserved protein Function unknown 53721566 Common - hypothetical protein BPSS0530 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 53721937 Common - methionine gamma-lyase BPSS0913 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 53721550 Common - acetyl-CoA hydrolase/transferase BPSS0514 95 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 53722191 Common - fumarate and nitrate reduction family regulatory protein BPSS1163 133 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 53722299 Common cnrT cobalt-nickel-resistance system transmembrane protein BPSS1277 28 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 53721367 Common - hypothetical protein BPSS0332 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 53721942 Common - DNA-binding protein BPSS0918 51 COG1959 COG1959, Predicted transcriptional regulator Transcription 53722466 Pathogen - hypothetical protein BPSS1443 1 None None None 53722922 Common - hypothetical protein BPSS1901 46 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53722290 Common - efflux system protein BPSS1268 68 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721705 Pathogen - hypothetical protein BPSS0676 1 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53723255 Common - hypothetical protein BPSS2237 33 COG3652 COG3652, Predicted outer membrane protein Function unknown 53721254 Common - MgtC family membrane protein BPSS0219 118 COG1285 SapB, Uncharacterized membrane protein Function unknown 53723279 Common - phosphatidylserine decarboxylase BPSS2261 70 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 53722619 Common pilR type IV pilus biosynthesis protein BPSS1596 90 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 53722959 Common - ABC transport system, ATP-binding protein BPSS1938 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 53721438 Pathogen - bacteriophage protein BPSS0400 1 None None None 53722321 Common - regulatory protein BPSS1297 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 53722909 Common - aromatic oxygenase BPSS1888 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53722937 Common phbB acetoacetyl-CoA reductase BPSS1916 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721218 Common - hypothetical protein BPSS0182 89 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 53722316 Common - amino acid permease BPSS1292 82 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 53722862 Common - hypothetical protein BPSS1843 46 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 53722367 Common - hypothetical protein BPSS1342 27 None None None 53722047 Pathogen - hypothetical protein BPSS1026 1 None None None 53723140 Common - FAA-hydrolase family protein BPSS2126 181 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 53722498 Common - mannitol dehydrogenase protein BPSS1476 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 53723101 Common - ABC transport system, ATP-binding protein BPSS2085 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 53721627 Common fptA Fe(III)-pyochelin receptor precursor BPSS0591 97 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 53722489 Common - hypothetical protein BPSS1468 22 None None None 53721426 Common - hypothetical protein BPSS0388 6 None None None 53722746 Common prpD 2-methylcitrate dehydratase BPSS1725 65 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 53722387 Common - 2-hydroxyacid dehydrogenase BPSS1362 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 53722524 Common - Clp-type ATPase chaperone protein BPSS1502 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 53722506 Common - hypothetical protein BPSS1484 29 COG5441 COG5441, Uncharacterized conserved protein Function unknown 53722251 Common - cation transporter BPSS1228 66 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 53723083 Common - fatty aldehyde dehydrogenase BPSS2065 197 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722646 Pathogen - type III secretion protein BPSS1623 1 None None None 53721262 Common - hypothetical protein BPSS0227 44 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 53721574 Common - transport protein BPSS0538 197 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722566 Common bsaO Type III secretion system protein BPSS1545 121 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 53721666 Common - response regulator protein BPSS0630 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53721062 Common - cytochrome monooxygenase related protein BPSS0023 58 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 53722481 Common - two-component sensor kinase BPSS1460 197 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53721766 Common - hypothetical protein BPSS0739 21 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 53722455 Pathogen - hypothetical protein BPSS1428 1 None None None 53722323 Common - LysR family transcriptional regulator BPSS1299 176 COG0583 LysR, Transcriptional regulator Transcription 53721264 Common - hypothetical protein BPSS0229 6 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 53723162 Common - LysR family transcriptional regulator BPSS2146 95 COG0583 LysR, Transcriptional regulator Transcription 53721805 Common - feruloyl-CoA synthase BPSS0781 184 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53723178 Common - hypothetical protein BPSS2162 33 COG4645 COG4645, Uncharacterized protein conserved in bacteria Function unknown 53722809 Common - hypothetical protein BPSS1790 19 COG5607 COG5607, Uncharacterized conserved protein Function unknown 53721212 Common - hypothetical protein BPSS0176 14 COG4455 ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion General function prediction only 53723066 Common - glutathione S-transferase BPSS2048 102 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 53723058 Common - inner membrane fatty acid desaturase BPSS2040 57 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 53721289 Common - ribose ABC transport system, ATP-binding protein BPSS0255 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 53723183 Common - glycosyl transferase BPSS2167 50 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 161723218 Common - trehalase BPSS0671 27 COG1626 TreA, Neutral trehalase Carbohydrate transport and metabolism 53721209 Common - hypothetical protein BPSS0173 49 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 53722500 Common rspA mandelate racemase/muconate lactonizing enzyme BPSS1478 117 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 53722179 Common - spermidine synthase protein BPSS1151 100 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 53723246 Pathogen - hypothetical protein BPSS2228 1 None None None 53722561 Pathogen bsaT surface presentation of antigens protein BPSS1540 1 None None None 53722411 Pathogen - hypothetical protein BPSS1384 1 None None None 53723234 Pathogen - hypothetical protein BPSS2217 1 None None None 53721324 Pathogen - hypothetical protein BPSS0289 1 None None None 53721481 Common - hypothetical protein BPSS0443 24 None None None 53722253 Common - transport protein BPSS1230 64 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721713 Common - hypothetical protein BPSS0685 105 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53723039 Common - decarboxylase BPSS2021 80 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 53721337 Common - fatty acid biosynthesis-related CoA ligase BPSS0302 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721091 Common - hypothetical protein BPSS0052 28 COG4275 COG4275, Uncharacterized conserved protein Function unknown 53722007 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase BPSS0984 217 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 53722269 Common - response regulator protein BPSS1246 106 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 53722768 Common - hypothetical protein BPSS1747 17 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 53723332 Common - response regulator protein BPSS2315 185 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722382 Common - MFS sugar transporter BPSS1357 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721915 Common - 2OG-Fe(II) oxygenase superfamily protein BPSS0891 42 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 53721811 Common - ABC transporter, ATP-binding protein BPSS0787 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 53721330 Common - transport related membrane protein BPSS0295 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 53723188 Common - hypothetical protein BPSS2172 5 None None None 53721171 Common - hypothetical protein BPSS0135 4 None None None 53723311 Common - quinone oxidoreductase BPSS2293 180 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 53721879 Common - inosine-uridine preferring nucleoside hydrolase BPSS0852 87 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 53721226 Common - dioxygenase BPSS0191 22 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 53721599 Common - aminopeptidase BPSS0563 53 COG2234 Iap, Predicted aminopeptidases General function prediction only 53722015 Common - hypothetical protein BPSS0994 29 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 53722794 Common - hypothetical protein BPSS1773 56 COG1683 COG1683, Uncharacterized conserved protein Function unknown 53721778 Common - lipoprotein BPSS0752 7 None None None 53721244 Common - hypothetical protein BPSS0209 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 53722800 Common - MarR-family regulatory protein BPSS1781 110 COG1846 MarR, Transcriptional regulators Transcription 53722100 Common - hypothetical protein BPSS1073A 4 None None None 53721734 Common - response regulator protein BPSS0705 208 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723339 Common - hypothetical protein BPSS2322 2 None None None 53721987 Common - periplasmic solute-binding protein BPSS0964 193 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 53723350 Common - hypothetical protein BPSS2333 236 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 53722401 Common - hypothetical protein BPSS1375 26 COG5478 COG5478, Predicted small integral membrane protein Function unknown 53721194 Common - hypothetical protein BPSS0158 3 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 53722716 Common accD acetyl-CoA carboxylase subunit beta BPSS1696 179 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 53721054 Common - hypothetical protein BPSS0015 2 None None None 53721785 Common codB cytosine permease BPSS0759 41 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 53721183 Common - transporter protein BPSS0147 121 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722849 Common - exopolysaccharide biosynthesis related tyrosine-protein kinase BPSS1830 188 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 53723325 Common - amidase BPSS2307 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 53721978 Common - D-alanyl-D-alanine dipeptidase BPSS0955 57 COG2173 DdpX, D-alanyl-D-alanine dipeptidase Cell envelope biogenesis, outer membrane 53722673 Common - patatin-like protein BPSS1652 33 COG3621 COG3621, Patatin General function prediction only 53722871 Common - oxidoreductase BPSS1852 109 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 53721910 Pathogen - hypothetical protein BPSS0886 1 None None None 53721340 Common - ketol-acid reductoisomerase BPSS0305 211 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 53722343 Common - D-lactate dehydrogenase BPSS1318 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 53721246 Pathogen - hypothetical protein BPSS0211 1 None None None 53723171 Common - MFS family transporter BPSS2155 128 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722066 Common - hypothetical protein BPSS1045 33 COG1839 COG1839, Uncharacterized conserved protein Function unknown 53721830 Common - hypothetical protein BPSS0805 178 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 53722150 Common - WD-repeat family protein BPSS1122 44 COG2319 COG2319, FOG: WD40 repeat General function prediction only 53721649 Common - hypothetical protein BPSS0613 4 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 53721731 Common - ATP-binding ABC transporter protein BPSS0702 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 53722667 Common - probable two-component sensor kinase BPSS1646 222 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 53721972 Pathogen - hypothetical protein BPSS0949 1 None None None 53723201 Common - hypothetical protein BPSS2184 5 None None None 53723014 Common mprA serine metalloprotease precursor BPSS1993 110 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 53722434 Pathogen sctD secretion-associated protein BPSS1407 4 None None None 53723137 Common - transporter protein BPSS2123 137 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 53722840 Common - hypothetical protein BPSS1821 25 None None None 53721998 Common - hypothetical protein BPSS0975 4 None None None 53722934 Common lysP lysine-specific permease BPSS1913 178 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 53722082 Pathogen - copG family protein BPSS1056 1 None None None 53723110 Common - hypothetical protein BPSS2096 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 53723302 Common - hypothetical protein BPSS2284 27 COG0778 NfnB, Nitroreductase Energy production and conversion 53721791 Common - DNA-binding protein BPSS0765 93 COG1802 GntR, Transcriptional regulators Transcription 53722052 Common - transmembrane sugar transport protein BPSS1031 76 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 53721325 Common - LysR-family transcriptional regulator BPSS0290 171 COG0583 LysR, Transcriptional regulator Transcription 53722432 Common sctS type III secretion-associated protein BPSS1405 46 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 53722995 Common - lipoprotein BPSS1974 5 None None None 53721278 Common - exported heme receptor protein BPSS0244 126 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 53721771 Common - hypothetical protein BPSS0745 2 None None None 53721658 Common - enoyl-CoA hydratase/isomerase family BPSS0622 158 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53721664 Common glsA glutaminase BPSS0628 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 53721866 Common - zinc-binding dehydrogenase BPSS0840 184 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53721650 Common - hypothetical protein BPSS0614 207 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 53721436 Pathogen - hypothetical protein BPSS0398 1 None None None 53722630 Pathogen - hypothetical protein BPSS1607 1 None None None 53723032 Common - hypothetical protein BPSS2014 2 None None None 53721872 Pathogen msr0960 DNA-binding protein BPSS0845a 1 COG1396 HipB, Predicted transcriptional regulators Transcription 53722045 Common - hypothetical protein BPSS1024 71 COG2353 COG2353, Uncharacterized conserved protein Function unknown 53723020 Common - transport related, membrane protein BPSS1999 51 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 53721371 Common - AraC-family transcriptional regulator BPSS0336 138 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722689 Common - hypothetical protein BPSS1669 46 COG1434 COG1434, Uncharacterized conserved protein Function unknown 53722277 Common - LysR family transcriptional regulator BPSS1255 124 COG0583 LysR, Transcriptional regulator Transcription 53721223 Common - LysR-family transcriptional regulator BPSS0187 92 COG0583 LysR, Transcriptional regulator Transcription 53721494 Common - hypothetical protein BPSS0457 24 COG5569 COG5569, Uncharacterized conserved protein Function unknown 53722164 Common - hypothetical protein BPSS1136 3 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53722542 Pathogen - hypothetical protein BPSS1521 1 None None None 53722075 Pathogen - hypothetical bacteriophage protein BPSS1049 1 None None None 53721084 Common pcaB 3-carboxy-cis,cis-muconate cycloisomerase BPSS0045 199 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 53721643 Common - aldehyde dehydrogenase family protein BPSS0607 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721294 Common - kinase BPSS0260 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 53721146 Common - hypothetical protein BPSS0110 20 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 53722850 Common - exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein BPSS1831 123 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 53722700 Common - histone-like protein BPSS1680 11 None None None 53723359 Common - hypothetical protein BPSS2342 179 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 53721741 Common - hypothetical protein BPSS0712 47 COG2343 COG2343, Uncharacterized protein conserved in bacteria Function unknown 53722680 Common - hypothetical protein BPSS1659 24 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 53722132 Common - phosphomethylpyrimidine kinase BPSS1104 217 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 53722734 Common - hypothetical protein BPSS1713 67 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 53721131 Common - outer membrane usher protein BPSS0093 39 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 53722378 Common betI transcriptional regulator BetI BPSS1353 42 COG1309 AcrR, Transcriptional regulator Transcription 53722109 Common - bacteriophage protein gp17 BPSS1082 16 None None None 53721391 Common uvrB excinuclease ABC subunit B BPSS0356 232 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 53721549 Common - CDP-alcohol phosphatidyltransferase BPSS0513 16 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 53723001 Pathogen - hypothetical protein BPSS1980 1 None None None 53721375 Common aroQ2 3-dehydroquinate dehydratase BPSS0340 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 53722519 Common - hypothetical protein BPSS1497 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 53723362 Common - sensory kinase protein BPSS2345 194 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53722510 Common - hypothetical protein BPSS1488 32 COG1262 COG1262, Uncharacterized conserved protein Function unknown 53721948 Common - hypothetical protein BPSS0924 24 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 53722592 Common - probable NADH oxidoreductase BPSS1571 179 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 53721514 Common groEL chaperonin GroEL BPSS0477 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 53722682 Pathogen - hypothetical protein BPSS1661 1 None None None 53721121 Common - thioredoxin BPSS0082 32 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 53721821 Common - H-NS-like protein BPSS0796A 6 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53721158 Pathogen - hypothetical protein BPSS0122 4 None None None 53721542 Common - DJ-1/PfpI family protein BPSS0506 40 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53723223 Common - transport related, membrane protein BPSS2206 94 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53721256 Pathogen - hypothetical protein BPSS0221A 1 None None None 53721751 Common - hypothetical protein BPSS0723 110 COG0628 PerM, Predicted permease General function prediction only 53721271 Common - chromosome replication initiation inhibitor protein BPSS0237 116 COG0583 LysR, Transcriptional regulator Transcription 53721956 Common - membrane transport protein BPSS0932 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722238 Common - sugar transporter BPSS1215 120 None None None 53722270 Common - nitrate transporter component BPSS1247 87 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 53722962 Common - methyl-accepting chemotaxis transducer transmembrane protein BPSS1941 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53721357 Common - iron-sulfur binding protein BPSS0322 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 53722022 Common - polyketide biosynthesis enoyl-CoA hydratase BPSS1001 136 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53722740 Common - succinate dehydrogenase BPSS1719 53 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 53722753 Pathogen - hypothetical protein BPSS1732 1 None None None 53722643 Common - type III secretion protein BPSS1620 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 53723046 Common - TetR-family transcriptional regulator BPSS2028 93 COG1309 AcrR, Transcriptional regulator Transcription 53721064 Common - hypothetical protein BPSS0025 59 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 53721193 Common - hypothetical protein BPSS0157 12 None None None 53722525 Common - hypothetical protein BPSS1503 49 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53723002 Common - hypothetical protein BPSS1981 69 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 53723253 Common - Zinc-binding dehydrogenase BPSS2235 158 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53723055 Common - inner membrane fatty acid desaturase BPSS2037 68 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 53722176 Common - hypothetical protein BPSS1148 21 COG3619 COG3619, Predicted membrane protein Function unknown 53721369 Common - oxidase BPSS0334 11 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 53722599 Common - hypothetical protein BPSS1578 3 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 53722140 Common - amino acid permease BPSS1112 59 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 53721407 Common - fumarate hydratase BPSS0372 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 53721402 Common - bipolymer transport protein BPSS0367 143 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 53722254 Common - hypothetical protein BPSS1231 9 None None None 53722464 Common - membrane-anchored cell surface protein BPSS1439 21 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 53722702 Common gtaB UTP-glucose-1-phosphate uridylyltransferase BPSS1682 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 53722369 Common - serine acetyltransferase BPSS1344 194 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 53723306 Common - HSP20/alpha crystallin family protein BPSS2288 168 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 53722087 Common - DNA binding protein BPSS1061 38 COG3636 COG3636, Predicted transcriptional regulator Transcription 53723096 Common - hypothetical protein BPSS2080 4 None None None 53722985 Common - hypothetical protein BPSS1964 55 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 53721660 Common macB macrolide-specific ABC-type efflux carrier BPSS0624 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 53722341 Common - hypothetical protein BPSS1316 115 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 53722731 Common - AsnC-family transcriptional regulator BPSS1710 167 COG1522 Lrp, Transcriptional regulators Transcription 53721185 Common - LysR-family transcriptional regulator BPSS0149 147 COG0583 LysR, Transcriptional regulator Transcription 53723277 Common - fusion protein, ATP-binding transmembrane ABC transporter and regulatory protein BPSS2259 249 COG5265 ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components Posttranslational modification, protein turnover, chaperones 53723150 Pathogen - hypothetical protein BPSS2134 1 None None None 53721302 Common - O-antigen acetylase BPSS0268 67 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 53722674 Common - hypothetical protein BPSS1653 33 None None None 53721161 Common - regulatory protein BPSS0125 8 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53722262 Common - family S11 unassigned peptidase BPSS1239 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 53721393 Common - hypothetical protein BPSS0358 20 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 53721689 Common - hypothetical protein BPSS0655 37 COG2939 COG2939, Carboxypeptidase C (cathepsin A) Amino acid transport and metabolism 53721129 Common - fimbrial protein BPSS0091 22 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 53721940 Common - N-hydroxyarylamine O-acetyltransferase BPSS0916 45 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 53721885 Common - flagellar hook-associated protein BPSS0860 93 COG1345 FliD, Flagellar capping protein Cell motility and secretion 53722953 Common - ABC transport system, membrane protein BPSS1932 71 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 53723122 Common - lipoprotein BPSS2108 6 None None None 53723346 Common - acyl transferase BPSS2329 181 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 53722571 Common - Type III secretion system protein BPSS1550 27 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 53722496 Common - DeoR family transcriptional regulator BPSS1474 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 53722605 Pathogen - hypothetical protein BPSS1582a 1 None None None 53721349 Common - monooxygenase BPSS0314 61 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53722426 Pathogen - hypothetical protein BPSS1399 4 None None None 53723214 Common - hypothetical protein BPSS2197 77 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 53721338 Common - diaminopimelate decarboxylase BPSS0303 209 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 53722249 Common - hypothetical protein BPSS1226 5 None None None 53722330 Common - ABC transporter substrate-binding protein BPSS1306 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 53722337 Common - hypothetical protein BPSS1312 30 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 53721101 Common kgtP alpha-ketoglutarate permease BPSS0061 130 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722375 Common - efflux/sugar transport/multidrug resistance protein BPSS1350 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721536 Common - hypothetical protein BPSS0500 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 53721425 Common - hypothetical protein BPSS0387 5 None None None 53721680 Common - hypothetical protein BPSS0646 3 None None None 53723142 Common - indole acetimide hydrolase BPSS2128 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 53721682 Common ftrA transcriptional activator FtrA BPSS0648 113 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53723175 Common - citrate lyase beta chain BPSS2159 111 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 53722362 Common - hypothetical protein BPSS1337 65 COG2391 COG2391, Predicted transporter component General function prediction only 53721590 Common - iron-sulphur Rieske protein BPSS0554 84 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53721353 Common - hypothetical protein BPSS0318 2 None None None 53722147 Common - RND efflux transporter BPSS1119 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 53723135 Common - cysteine desulfurase BPSS2121 241 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 53723146 Pathogen - hypothetical protein BPSS2131a 1 None None None 53722668 Common - hypothetical protein BPSS1647 39 COG3287 COG3287, Uncharacterized conserved protein Function unknown 53721265 Common - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein BPSS0230 13 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 53721571 Pathogen - hypothetical protein BPSS0535 1 None None None 53723200 Common - hypothetical protein BPSS2183 8 None None None 53721843 Common - hypothetical protein BPSS0817 58 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 53721117 Common - hypothetical protein BPSS0079 6 None None None 53722313 Common - hypothetical protein BPSS1289 2 None None None 53723191 Common - cytochrome P460 BPSS2174 15 None None None 53722504 Common nadE NAD synthetase BPSS1482 173 COG0171 NadE, NAD synthase Coenzyme metabolism 53721423 Common - hypothetical protein BPSS0385 6 COG2810 COG2810, Predicted type IV restriction endonuclease Defense mechanisms 53721173 Common - hypothetical protein BPSS0137 2 None None None 53722617 Pathogen - hypothetical protein BPSS1594 2 None None None 53722623 Common pilN type IV pilus biosynthesis protein BPSS1600 50 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 53722059 Pathogen - hypothetical protein BPSS1038 1 None None None 53722013 Common - histidine kinase protein BPSS0990 99 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 53721586 Common - NADH:flavin oxidoreductase / NADH oxidase family protein BPSS0550 181 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 53722729 Common - nitrilotriacetate monooxygenase BPSS1708 57 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53722494 Common - transposase BPSS1472 24 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722536 Common folE GTP cyclohydrolase I BPSS1514 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 53722205 Pathogen - hypothetical protein BPSS1177 2 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722356 Common - phosphatase protein BPSS1331 6 COG1409 Icc, Predicted phosphohydrolases General function prediction only 53721905 Pathogen - hypothetical protein BPSS0881 1 None None None 53722980 Common cdd cytidine deaminase BPSS1959 113 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 53723103 Common - LacI family regulatory protein BPSS2087 126 COG1609 PurR, Transcriptional regulators Transcription 53722638 Pathogen - type III secretion protein BPSS1615 1 None None None 53723290 Common bkdA2 2-oxoisovalerate dehydrogenase beta subunit BPSS2272 169 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 53722448 Common - hypothetical protein BPSS1421 33 COG3555 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases Posttranslational modification, protein turnover, chaperones 53722412 Pathogen - ATP/GTP binding protein BPSS1385 2 None None None 53722825 Common - hypothetical protein BPSS1806 35 COG4101 COG4101, Predicted mannose-6-phosphate isomerase Carbohydrate transport and metabolism 53722914 Common catC muconolactone delta-isomerase BPSS1893 23 COG4829 CatC1, Muconolactone delta-isomerase Secondary metabolites biosynthesis, transport, and catabolism 53721467 Common - glycosyl transferase (O-antigen related) BPSS0428 19 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53721725 Common hpcD 5-carboxymethyl-2-hydroxymuconate delta-isomerase BPSS0696 30 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 53722554 Common bicA surface presentation of antigens protein BPSS1533 18 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 53722656 Common - probable non-ribosomal peptide synthetase BPSS1633 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723218 Common - hypothetical protein BPSS2201 11 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 53722679 Pathogen - hypothetical protein BPSS1658 1 None None None 53721629 Common - iron-regulated membrane protein BPSS0593 3 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 53723016 Common irlS2 metal-related two-component system, histidine kinase BPSS1995 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53722063 Common czcB cobalt-zinc-cadmium resistance protein BPSS1042 149 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 53721450 Pathogen - hypothetical protein BPSS0412 1 None None None 53721588 Common - electron transfer flavoprotein alpha-subunit BPSS0552 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 53723155 Common oppC oligopeptide transport system permease protein BPSS2139 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 53723211 Common - hypothetical protein BPSS2194 9 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 53721638 Common - hypothetical protein BPSS0602 11 None None None 53722749 Common - secretion/activator protein BPSS1728 46 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 53721298 Pathogen - hypothetical protein BPSS0264 1 None None None 53722899 Common - dehydrogenase BPSS1878 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721044 Common kbl 2-amino-3-ketobutyrate coenzyme A ligase BPSS0005 194 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 53721280 Common - LysR-family transcriptional regulator BPSS0246 159 COG0583 LysR, Transcriptional regulator Transcription 53721145 Pathogen - hypothetical protein BPSS0109 3 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 53721411 Common - hypothetical protein BPSS0376 23 COG4327 COG4327, Predicted membrane protein Function unknown 53722217 Pathogen - hypothetical protein BPSS1192 1 None None None 53723286 Common - hypothetical protein BPSS2268 94 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 53722158 Common - hypothetical protein BPSS1130 2 None None None 53722584 Common - LysE-family translocator BPSS1563 17 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 53721440 Common - bacteriophage/transposase fusion protein BPSS0402 130 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 53721078 Common - dehydrogenase BPSS0039 218 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721962 Common - family S33 non-peptidase homologue BPSS0938 118 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53723262 Common - transferase BPSS2244 217 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 53723272 Common - carbamoyltransferase BPSS2254 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 53722084 Common - bacteriophage gp30 protein BPSS1058 6 None None None 53721622 Common pchE pyochelin synthetase BPSS0586 190 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723356 Common shc squalene--hopene cyclase BPSS2339 42 COG1657 SqhC, Squalene cyclase Lipid metabolism 53722303 Pathogen - hypothetical protein BPSS1280 1 None None None 53721555 Pathogen - hypothetical protein BPSS0519 2 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 53721716 Common - sensor kinase protein BPSS0687 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53722488 Common - aminotransferase protein BPSS1467 211 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53723226 Common - hypothetical protein BPSS2209 15 None None None 53721898 Pathogen - hypothetical protein BPSS0874 1 None None None 53723028 Common - hypothetical protein BPSS2010 4 None None None 53723319 Common - hypothetical protein BPSS2301 18 COG3302 DmsC, DMSO reductase anchor subunit General function prediction only 53721796 Pathogen - hypothetical protein BPSS0769A 1 None None None 53721749 Common - NADH:flavin oxidoreductase / NADH oxidase family protein BPSS0720 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 53721133 Common - hypothetical protein BPSS0095 5 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 53722604 Common bcsB cellulose synthase regulator protein BPSS1582 22 None None None 53723094 Common - hypothetical protein BPSS2078 52 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 53721127 Common - hypothetical protein BPSS0089 14 COG4287 PqaA, PhoPQ-activated pathogenicity-related protein General function prediction only 53722906 Common - aromatic hydrocarbons catabolism-related reductase BPSS1885 186 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 53722834 Common - non-ribosomal peptide synthase BPSS1815 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722094 Pathogen - hypothetical bacteriophage protein BPSS1068 1 None None None 53722480 Common - acetyltransferase protein BPSS1459 84 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 53722391 Common folB dihydroneopterin aldolase protein BPSS1365 6 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 53722508 Common - hypothetical protein BPSS1486 20 None None None 53721418 Common - DNA-binding regulatory protein BPSS0381 31 COG1476 COG1476, Predicted transcriptional regulators Transcription 53721505 Common - putative aminotransferase BPSS0468 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 53721287 Common - DNA-binding protein BPSS0253 70 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 53721935 Common - amidase BPSS0911 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 53722225 Common - GntR family regulatory protein BPSS1200 190 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53721272 Common - penicillin-binding protein BPSS0238 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 53722112 Common - bacteriophage major tail tube protein BPSS1085 30 COG3498 COG3498, Phage tail tube protein FII General function prediction only 53721926 Common - hypothetical protein BPSS0902 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 53722103 Pathogen - hypothetical bacteriophage protein BPSS1076 1 None None None 53723361 Common - response regulator protein BPSS2344 208 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 53722308 Common - family C39 unassigned peptidase BPSS1285 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 53722964 Pathogen - hypothetical protein BPSS1943 1 None None None 53721631 Common - 2Fe-2S iron-sulfur BPSS0595 78 COG0633 Fdx, Ferredoxin Energy production and conversion 53722887 Common - hypothetical protein BPSS1867 38 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 53721372 Pathogen - hypothetical protein BPSS0337 1 None None None 53723004 Pathogen - deoxyribonuclease BPSS1983 1 None None None 53722452 Common - glycine-betaine binding ABC transporter permease protein BPSS1425 181 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 53722232 Common - transposase BPSS1209 35 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 53723297 Common - fusion protein, pyridine nucleotide-disulphide oxidoreductase and patatin-like phospholipase BPSS2279 224 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 53721056 Common - 3-hydroxybutyrate dehydrogenase BPSS0017 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722688 Common fdoG formate dehydrogenase-O, major subunit BPSS1667 186 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 53721431 Common - hypothetical protein BPSS0394 24 COG3514 COG3514, Uncharacterized protein conserved in bacteria Function unknown 53722942 Pathogen - hypothetical protein BPSS1921 1 None None None 53721602 Common - lipoprotein BPSS0566 61 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 53722161 Common fadH 2,4-dienoyl-CoA reductase BPSS1133 185 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 53721950 Common - flavin-binding monooxygenase-like protein BPSS0926 74 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 53723194 Common - LysR-family transcriptional regulator BPSS2177 86 COG0583 LysR, Transcriptional regulator Transcription 53723077 Common ansA L-asparaginase BPSS2060 136 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 53721389 Common - 3-hydroxybutyrate dehydrogenase BPSS0354 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722397 Common - AraC family transcriptional regulator BPSS1371 148 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721652 Common - AraC family regulatory protein BPSS0616 57 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53723305 Common - hypothetical protein BPSS2287 17 COG0778 NfnB, Nitroreductase Energy production and conversion 53721808 Common - hypothetical protein BPSS0784 21 None None None 53722842 Common fbp peptidyl-prolyl cis-trans isomerase BPSS1823 155 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 53721316 Common gabT 4-aminobutyrate aminotransferase BPSS0281 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 53722258 Common - zinc-binding xylitol/sorbitol dehydrogenase BPSS1235 202 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53721385 Common - hypothetical protein BPSS0350 16 COG4341 COG4341, Predicted HD phosphohydrolase General function prediction only 53722816 Common - trehalose trehalohydrolase BPSS1797 113 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 53722414 Common - hypothetical protein BPSS1387 6 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 53722972 Common - ATP synthesis-related protein BPSS1951 4 None None None 53723281 Pathogen - hypothetical protein BPSS2263 1 None None None 53722777 Common dnaG DNA primase BPSS1756 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 53722239 Common - thiamine-phosphate pyrophosphorylase BPSS1216 190 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 53722998 Common - hypothetical protein BPSS1977 13 COG3664 XynB, Beta-xylosidase Carbohydrate transport and metabolism 53721957 Common - methyl-accepting chemotaxis protein BPSS0933 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53721951 Common - hypothetical protein BPSS0927 2 COG3714 COG3714, Predicted membrane protein Function unknown 53721475 Common - transporter protein BPSS0437 67 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721073 Common - fatty aldehyde dehydrogenase BPSS0034 191 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721266 Common - hypothetical protein BPSS0231 2 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 53722540 Common - transposase BPSS1519 18 None None None 53721677 Common - response regulator protein BPSS0643 209 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723125 Common - hypothetical protein BPSS2111 76 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 53721088 Pathogen - hypothetical protein BPSS0049 1 None None None 53722799 Common - hypothetical protein BPSS1780 20 None None None 53722431 Common sctR type III secretion system protein BPSS1404 128 COG4790 EscR, Type III secretory pathway, component EscR Intracellular trafficking and secretion 53722245 Common - efflux pump/antiporter BPSS1222 164 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 53723030 Common - hypothetical protein BPSS2012 3 None None None 53722212 Pathogen - hypothetical protein BPSS1184 1 None None None 53721758 Common - hypothetical protein BPSS0732 2 None None None 53722636 Pathogen - type III secretion protein BPSS1613 1 None None None 53723301 Common - hypothetical protein BPSS2283 55 COG2187 COG2187, Uncharacterized protein conserved in bacteria Function unknown 53722695 Common - acetyltransferase BPSS1675 18 None None None 53721744 Common - hypothetical protein BPSS0715 13 None None None 53721320 Common - hypothetical protein BPSS0285 52 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 53722766 Common - hypothetical protein BPSS1745 17 None None None 53722782 Common - hypothetical protein BPSS1761 81 COG1469 COG1469, Uncharacterized conserved protein Function unknown 53721930 Common - pyridine nucleotide-disulphide oxidoreductase BPSS0906 227 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 53721573 Common - UDP-glucoronosyl and UDP-glucosyl transferase BPSS0537 35 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 53721874 Common - hypothetical protein BPSS0847 65 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53721912 Common - MgtC family protein BPSS0888 109 COG1285 SapB, Uncharacterized membrane protein Function unknown 53722037 Common - ionic antiporter BPSS1016 43 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 53721156 Common - fimbrial usher protein BPSS0120 39 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 53721309 Common - IclR-family transcriptional regulator BPSS0274 117 COG1414 IclR, Transcriptional regulator Transcription 53722502 Common - hypothetical protein BPSS1480 2 None None None 53722710 Common - hypothetical protein BPSS1690 37 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 53722762 Common lipA1 Lipase precursor BPSS1741 38 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 53722517 Common - two-component regulator sensor kinase BPSS1495 74 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53722562 Common bsaS ATP synthase SpaL BPSS1541 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 53721779 Pathogen - hypothetical protein BPSS0753 1 None None None 53723089 Common - hypothetical protein BPSS2071 80 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53723207 Common - outer membrane protein BPSS2190 141 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 53722479 Common - MFS family transport protein BPSS1458 134 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722641 Pathogen - type III secretion protein BPSS1618 4 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 53722878 Common - hypothetical protein BPSS1859 35 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 53722590 Common - N-acylhomoserine lactone-dependent regulatory protein BPSS1569 74 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722723 Pathogen - hypothetical protein BPSS1703 1 None None None 53721083 Common pcaJ 3-oxoadipate CoA-transferase subunit B BPSS0044 93 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 53721248 Common - hypothetical protein BPSS0213 4 None None None 53722709 Common - UDP-glucose 4-epimerase BPSS1689 150 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53721708 Common - oxidoreductase alpha subunit BPSS0680 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 53722009 Common - hypothetical protein BPSS0986 3 None None None 53723177 Common - MmgE/PrpD family protein BPSS2161 89 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 53721342 Common - aldehyde dehydrogenase BPSS0307 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722787 Common - sulfurtransferase (cyanide detoxification) BPSS1766 142 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 53723243 Pathogen - hypothetical protein BPSS2226 1 None None None 53722792 Common - decarboxylase BPSS1771 137 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 53721327 Common - multidrug efflux system exported protein BPSS0292 154 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 53722807 Common - molybdenum transport-related, ATP-binding protein BPSS1788 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 53721258 Common - hypothetical protein BPSS0223 7 None None None 53721214 Common - hypothetical protein BPSS0178 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 53721768 Common - LysR family regulatory protein BPSS0741 159 COG0583 LysR, Transcriptional regulator Transcription 53723327 Common - acetyltransferase (GNAT) family protein BPSS2309 93 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 53721976 Common - dipeptide transport system permease protein BPSS0953 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 53722061 Common irlR transcriptional activator protein BPSS1040 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723232 Pathogen - hypothetical protein BPSS2215 1 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 53721528 Common ahpC alkyl hydroperoxide reductase protein BPSS0492 215 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 53722421 Common sctN type III secretion system ATPase BPSS1394 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 53721628 Pathogen - hypothetical protein BPSS0592 1 None None None 53721696 Common - collagenase BPSS0666 15 None None None 53721862 Common - universal stress protein BPSS0836 19 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53722291 Common - peptide synthase/polyketide synthase BPSS1269 235 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721648 Common - short chain dehydrogenase BPSS0612 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 53721694 Common - response regulator protein BPSS0664 166 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723117 Common - hypothetical protein BPSS2103 20 COG3913 SciT, Uncharacterized protein conserved in bacteria Function unknown 53722289 Common - MbtH-like protein BPSS1267 36 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 53722402 Common - quinol oxidase subunit BPSS1376 148 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 53723165 Common - MmgE/Prp family protein BPSS2149 48 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 53723037 Common - hypothetical protein BPSS2019 30 COG3809 COG3809, Uncharacterized protein conserved in bacteria Function unknown 53721207 Common - hypothetical protein BPSS0171 29 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 53721903 Common - porin protein BPSS0879 26 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721618 Common pchB isochorismate-pyruvate lyase BPSS0582 6 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 53721332 Common - acetyltransferase BPSS0297 13 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 53722611 Common - hypothetical protein BPSS1588 2 None None None 53721043 Common - DNA-binding protein BPSS0004 112 COG1396 HipB, Predicted transcriptional regulators Transcription 53722844 Common - glycosyltransferase BPSS1825 208 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 53721483 Common - hypothetical protein BPSS0446 54 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53722407 Common - transmembrane phospholipase protein BPSS1381 60 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 53722180 Common - CopG family protein BPSS1152 9 None None None 53722859 Common - N-acetylmuramoyl-L-alanine amidase BPSS1840 104 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 53723348 Common - lipoprotein BPSS2331 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 53721097 Common uvrA excinuclease ABC subunit A BPSS0058 238 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 53721339 Common - hypothetical protein BPSS0304 2 COG3882 FkbH, Predicted enzyme involved in methoxymalonyl-ACP biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53722280 Common - oxidoreductase/dehydrogenase BPSS1258 92 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 53721803 Common - p-hydroxycinnamoyl CoA hydratase/lyase BPSS0779 184 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53723064 Common - IS element transposase BPSS2046 45 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722920 Common - AraC-family regulatory protein BPSS1899 24 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722348 Pathogen - hypothetical protein BPSS1323 1 None None None 53723330 Common - modulator of DNA gyrase BPSS2312 167 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 53723120 Common - hypothetical protein BPSS2106 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 53722042 Pathogen - lipoprotein BPSS1021 1 None None None 53721196 Common - siderophore biosynthesis-related protein BPSS0160 12 COG3207 DIT1, Pyoverdine/dityrosine biosynthesis protein Secondary metabolites biosynthesis, transport, and catabolism 53721534 Common - transglutaminase-like superfamily protein BPSS0498 74 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 53722881 Common - ABC transport system, ATP-binding protein BPSS1862 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 53723216 Common - AsnC-family regulatory protein BPSS2199 164 COG1522 Lrp, Transcriptional regulators Transcription 53722118 Common ald alanine dehydrogenase BPSS1090 166 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 53723018 Common oxa beta-lactamase precursor BPSS1997 37 COG2602 COG2602, Beta-lactamase class D Defense mechanisms 53722149 Common ribA GTP cyclohydrolase II BPSS1121 181 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 53721858 Pathogen - hypothetical protein BPSS0832 1 None None None 53723129 Common dsdA D-serine dehydratase BPSS2116 35 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 53721050 Common - tartrate dehydrogenase BPSS0011 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 53722057 Common - Acyl-CoA dehydrogenase BPSS1036 51 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53722462 Pathogen - lipoprotein BPSS1437 1 None None None 53721806 Common - putative 3-hydroxyphenylpropionic transporter MhpT BPSS0782 38 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721592 Common - hypothetical protein BPSS0556 67 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 53722358 Common - hypothetical protein BPSS1333 31 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53722486 Common - thiamine biosynthesis lipoprotein precursor BPSS1465 135 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 53721398 Common - hypothetical protein BPSS0363 8 None None None 53723284 Common - 4'-phosphopantetheinyl transferase superfamily protein BPSS2266 59 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 53721115 Common - HNS-like regulatory protein BPSS0077A 11 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53721449 Common - hypothetical protein BPSS0411 2 None None None 53722234 Common - hypothetical protein BPSS1211 4 None None None 53723205 Common - hypothetical protein BPSS2188 27 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 53721919 Common - hypothetical protein BPSS0895 7 None None None 53721291 Common - ribose ABC transport system, substrate-binding exported protein BPSS0257 110 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53721738 Common - transposase BPSS0709 64 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722428 Common sctV type III secretion-associated protein BPSS1401 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 53722020 Common - acyl carrier protein BPSS0999 5 None None None 53722888 Common - voltage gated chloride channel membrane protein BPSS1868 117 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 53721891 Common - GerE family regulatory protein BPSS0867 92 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722742 Common - GntR-family transcriptional regulator BPSS1721 131 COG2188 PhnF, Transcriptional regulators Transcription 53722704 Common - lipopolysaccharide biosynthesys-related glycosyltransferase BPSS1684 147 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 53722523 Common - hypothetical protein BPSS1501 46 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 53722738 Common sdhB succinate dehydrogenase iron-sulfur subunit BPSS1717 194 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 53721066 Common - hypothetical protein BPSS0027 108 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 53722080 Pathogen - hypothetical bacteriophage-acquired protein BPSS1054 1 None None None 53723049 Common - acetyl-CoA carboxylase carboxyltransferase BPSS2031 147 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 53722577 Common - MarR-family transcriptional regulator BPSS1556 64 COG1846 MarR, Transcriptional regulators Transcription 53721473 Common - AraC-family transcriptional regulator BPSS0435 123 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722955 Common - universal stress protein BPSS1934 12 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53722672 Common - hypothetical protein BPSS1651 6 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 53722528 Pathogen - hypothetical protein BPSS1506 1 None None None 53722444 Common - putative aldolase BPSS1417 118 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 53723098 Common - ABC transporter system permease BPSS2082 164 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 53722295 Common - acyl-CoA dehydrogenase BPSS1273 153 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53721839 Common - sensor histidine kinase BPSS0813 209 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 53722256 Common - binding-protein-dependent transport system protein BPSS1233 132 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 53721350 Common - ABC transport system, ATP-binding protein BPSS0315 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 53723355 Common - hypothetical protein BPSS2338 16 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 53722282 Common - hypothetical protein BPSS1260 6 None None None 53722050 Common - tonB-family receptor BPSS1029 97 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 53722832 Common - non-ribosomal peptide synthase related protein BPSS1813 13 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 53722941 Pathogen - hypothetical protein BPSS1920 1 None None None 53722446 Common hyi hydroxypyruvate isomerase BPSS1419 77 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 53721362 Common - sugar transport-related, membrane protein BPSS0327 126 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 53723172 Common - hypothetical protein BPSS2156 30 None None None 53723258 Common - hypothetical protein BPSS2240 11 None None None 53722932 Common - hypothetical protein BPSS1911 9 COG4409 NanH, Neuraminidase (sialidase) Carbohydrate transport and metabolism 53723053 Common - hypothetical protein BPSS2035 61 COG3246 COG3246, Uncharacterized conserved protein Function unknown 53721409 Common - hypothetical protein BPSS0374 136 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 53723275 Common - short chain dehydrogenase BPSS2257 225 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 53722373 Common - outer membrane efflux protein BPSS1348 93 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53723152 Common - family S43 non-peptidase homologue BPSS2136 7 None None None 53723090 Common - mandelate racemase / muconate lactonizing enzyme BPSS2072 113 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 53722091 Common - major capsid protein precursor BPSS1065 22 None None None 53722326 Common - family M55 unassigned peptidase BPSS1302 35 COG2362 DppA, D-aminopeptidase Amino acid transport and metabolism 53721837 Common - hypothetical protein BPSS0812 2 None None None 53721250 Common tar methyl-accepting chemotaxis protein BPSS0215 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53722993 Common - hypothetical protein BPSS1972 2 None None None 53722901 Common - Na+/H+ antiporter membrane protein BPSS1880 116 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 53722897 Pathogen - hypothetical protein BPSS1876A 1 None None None 53721567 Common - hypothetical protein BPSS0531 86 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 53721296 Common - aminoglycoside 6'-N-acetyltransferase BPSS0262 8 COG0456 RimI, Acetyltransferases General function prediction only 53721435 Pathogen - hypothetical protein BPSS0397A 1 None None None 53722894 Common - chemotaxis-related protein BPSS1874 21 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 53721147 Common - hypothetical protein BPSS0111 40 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 53722138 Common - gamma-butyrobetaine,2-oxoglutarate dioxygenase BPSS1110 10 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53722600 Pathogen - hypothetical protein BPSS1578a 1 None None None 53722582 Common - carboxypeptidase BPSS1561 37 COG2939 COG2939, Carboxypeptidase C (cathepsin A) Amino acid transport and metabolism 53721154 Pathogen - hypothetical protein BPSS0118 1 None None None 53721046 Common - hypothetical protein BPSS0007 113 COG2353 COG2353, Uncharacterized conserved protein Function unknown 53721526 Common - hypothetical protein BPSS0489 32 COG3832 COG3832, Uncharacterized conserved protein Function unknown 53723249 Common - response regulator BPSS2231 113 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723323 Common - lipoprotein BPSS2305 16 COG2143 COG2143, Thioredoxin-related protein Posttranslational modification, protein turnover, chaperones 53723149 Common - hypothetical protein BPSS2133 35 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 53722666 Common - hypothetical protein BPSS1645 8 COG4460 COG4460, Uncharacterized protein conserved in bacteria Function unknown 53722492 Common - FAD-binding oxidoreductase BPSS1470 97 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53722305 Common - lipoprotein BPSS1282 7 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 53723161 Common - hypothetical protein BPSS2145 21 COG4632 EpsL, Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase Carbohydrate transport and metabolism 53721624 Common pchG pyochelin biosynthetic protein BPSS0588 15 COG4693 PchG, Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53722086 Common - hypothetical bacteriophage protein BPSS1060 42 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 53722276 Common - LysR family transcriptional regulator BPSS1253 188 COG0583 LysR, Transcriptional regulator Transcription 53721421 Pathogen - hypothetical protein BPSS0384 1 None None None 53723308 Common - AMP-binding enzyme BPSS2290 216 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721203 Common - hypothetical protein BPSS0167 46 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 53722531 Common - hypothetical protein BPSS1509 46 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 53721922 Common - hypothetical protein BPSS0898 15 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 53721351 Common - ACB transport system, membrane protein BPSS0316 144 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 53723168 Common - zinc-binding dehydrogenase BPSS2152 20 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 53723260 Common - short chain dehydrogenase BPSS2242 227 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 53721231 Common accC acetyl-CoA carboxylase biotin carboxylase subunit BPSS0196 226 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 53721604 Common - 3-hydroxybutyryl-CoA dehydrogenase BPSS0568 157 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 53722602 Common - cellulose biosynthesis protein BPSS1580 19 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 53721684 Common - peptidase BPSS0650 99 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 53722219 Common - peptide synthase/polyketide synthase BPSS1194 214 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723270 Common - LPS biosynthesis related glycosyltransferase BPSS2252 97 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 53721794 Common - conserved hypothetical protein (fragment) BPSS0768 5 None None None 53723044 Common - carbohydrate kinase BPSS2026 172 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 53722071 Pathogen - hypothetical bacteriophage protein BPSS1048a 1 None None None 53721851 Common - hypothetical protein BPSS0825 8 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 53721560 Common - hypothetical protein BPSS0524 55 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53722265 Common - nitrite reductase BPSS1242 51 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 53722621 Pathogen - hypothetical protein BPSS1598 1 None None None 53722267 Common - nitrate transporter BPSS1244 23 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 53722089 Common - bacteriophage terminase, ATPase subunit BPSS1063 24 COG5484 COG5484, Uncharacterized conserved protein Function unknown 53722192 Common - hypothetical protein BPSS1164 26 COG2936 COG2936, Predicted acyl esterases General function prediction only 53723193 Common - hypothetical protein BPSS2176 31 COG5476 COG5476, Uncharacterized conserved protein Function unknown 53721176 Common - sugar ABC transport system, lipoprotein BPSS0140 89 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53722203 Common - oligopeptidase A BPSS1175 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 53721600 Pathogen - thermolysin metallopeptidase BPSS0564 3 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 53721584 Common - family M19 non-peptidase homologue BPSS0548 103 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 53722983 Common deoC deoxyribose-phosphate aldolase BPSS1962 77 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 53722991 Common - family S33 unassigned peptidase BPSS1970 34 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722029 Common - polyketide synthase BPSS1008 233 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721463 Common - glycosyl transferase BPSS0424 6 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53722114 Common - hypothetical protein BPSS1086a 5 None None None 53723365 Common - hypothetical protein BPSS2347a 8 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 53721304 Common argT lysine-arginine-ornithine transport system, binding exported protein BPSS0269 172 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 53722097 Pathogen - bacteriophage membrane protein BPSS1071 1 None None None 53723292 Common - hypothetical protein BPSS2274 8 None None None 53722260 Common - AraC family transcriptional activator protein BPSS1237 129 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721465 Common - heptosyltransferase (O-antigen related) BPSS0426 56 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 53722912 Common catB muconate cycloisomerase I BPSS1891 108 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 53721983 Common - Rhs-related membrane protein BPSS0960 63 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 53722610 Common speB agmatinase BPSS1587 158 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 53722240 Common - hypothetical protein BPSS1217 50 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 53721723 Common hpcC 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase BPSS0694 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721597 Common - hypothetical protein BPSS0561 62 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 53721928 Common - aldehyde dehydrogenase family protein BPSS0904 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722335 Common estA esterase BPSS1311 117 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 53721887 Common - hypothetical protein BPSS0862 21 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 53721387 Common - hypothetical protein BPSS0352 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 53721081 Common pobA 4-hydroxybenzoate 3-monooxygenase BPSS0042 68 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 53722393 Common soxA sarcosine oxidase alpha subunit BPSS1367 181 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 53721376 Common aroE shikimate 5-dehydrogenase BPSS0341 155 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 53722978 Common - 6-phosphofructokinase BPSS1957 97 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 53721671 Common - hypothetical protein BPSS0635 54 COG3408 GDB1, Glycogen debranching enzyme Carbohydrate transport and metabolism 53722515 Common - hypothetical protein BPSS1493 13 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 53721413 Common - phage integrase BPSS0378 102 COG0582 XerC, Integrase DNA replication, recombination, and repair 53723115 Common - hypothetical protein BPSS2101 28 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 53722686 Common fdoI formate dehydrogenase, cytochrome b556 (FDO) subunit BPSS1665 70 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 53723196 Pathogen - hypothetical protein BPSS2179 2 COG4319 COG4319, Ketosteroid isomerase homolog Function unknown 53722814 Common - hypothetical protein BPSS1795 211 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 53722581 Common mdlB L(+)-mandelate dehydrogenase BPSS1560 111 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 53721383 Common - putativephosphonoacetate hydrolase BPSS0348 10 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 53721654 Common - AMP-binding enzyme BPSS0618 220 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 53722971 Pathogen - hypothetical protein BPSS1950 1 None None None 53721953 Common - hypothetical protein BPSS0929 17 COG0789 SoxR, Predicted transcriptional regulators Transcription 53721679 Pathogen - hypothetical protein BPSS0645 1 COG5475 COG5475, Uncharacterized small protein Function unknown 53722049 Common - iron uptake regulator protein BPSS1028 38 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 53721313 Common - oxygenase BPSS0278 30 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53721901 Common - N-ethylmaleimide reductase BPSS0877 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 53722438 Pathogen - hypothetical protein BPSS1411 4 None None None 53722416 Pathogen - hypothetical protein BPSS1389 1 None None None 53722586 Common - hypothetical protein BPSS1565 19 COG3832 COG3832, Uncharacterized conserved protein Function unknown 53721774 Common - hypothetical protein BPSS0748 34 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 53722911 Common - cat operon LysR-family transcriptional activator BPSS1890 190 COG0583 LysR, Transcriptional regulator Transcription 53722568 Common - type III secretion system protein BPSS1547 6 None None None 53722450 Common - glycine betaine/L-proline-binding protein ABC transporter component BPSS1423 60 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 53722364 Common - ArsR family regulatory protein BPSS1339 149 COG0640 ArsR, Predicted transcriptional regulators Transcription 53722944 Pathogen - hypothetical protein BPSS1923 1 None None None 53721546 Common - hypothetical protein BPSS0510 31 COG1213 COG1213, Predicted sugar nucleotidyltransferases Cell envelope biogenesis, outer membrane 53721159 Common - hypothetical protein BPSS0123 7 None None None 53721135 Common - hypothetical protein BPSS0097 48 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 53721503 Common potG putrescine ABC transport system, ATP-binding protein BPSS0466 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 53723147 Common - hypothetical protein BPSS2131b 5 None None None 53721125 Pathogen - hypothetical protein BPSS0087 1 None None None 53722852 Common udg2 UDP-glucose 6-dehydrogenase 2 BPSS1833 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 53722136 Common - NUDIX/MutT family protein BPSS1108 47 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 53721459 Common rfbG CDP-glucose 4,6-dehydratase (O-antigen-related) BPSS0420 225 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53722918 Common cyoA ubiquinol oxidase polypeptide II precursor BPSS1897 139 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 53721222 Common - hypothetical protein BPSS0186 4 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 53721949 Common - short chain dehydrogenase BPSS0925 235 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 53722961 Common - sensor kinase/response regulator fusion protein BPSS1940 217 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 53722966 Common atpG ATP synthase gamma chain BPSS1945 11 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 53722785 Common xseB exodeoxyribonuclease VII small subunit BPSS1764 23 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 53723251 Common - DNA glycosylase BPSS2233 152 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 53721395 Common - hypothetical protein BPSS0360 39 COG0348 NapH, Polyferredoxin Energy production and conversion 53722274 Common - allantoate amidohydrolase BPSS1251 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 53723075 Common - ATP-binding inner membrane transport protein BPSS2058 133 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 53721518 Common - CoA ligase BPSS0481 220 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 53723299 Common - PHB depolymerase BPSS2281 43 COG4553 DepA, Poly-beta-hydroxyalkanoate depolymerase Lipid metabolism 53721433 Pathogen - bacteriophage protein Gp49 BPSS0396 1 None None None 53723220 Common - amino acid transport, membrane protein BPSS2203 145 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 53722549 Pathogen - hypothetical protein BPSS1528 1 None None None 53722755 Common - sedolisin BPSS1734 26 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 53722035 Common - hypothetical protein BPSS1014 137 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 53723369 Common - replication protein BPSS2351 13 None None None 53721692 Common - hypothetical protein BPSS0659 9 None None None 53721801 Common - hypothetical protein BPSS0777 26 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 53722805 Common - molybdenum transport-related, exported protein BPSS1786 164 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 53723227 Common - cation transport related protein BPSS2210 21 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 53722866 Common - lipoprotein BPSS1847 51 COG2930 COG2930, Uncharacterized conserved protein Function unknown 53723062 Common - hypothetical protein BPSS2044 5 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53721103 Common dctD C4-dicarboxylate transport transcriptional response regulator BPSS0063 216 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 53722293 Common - phosphopantetheine binding protein BPSS1271 21 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721969 Common - subfamily M23B unassigned peptidase BPSS0945 184 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 53722404 Common - hypothetical protein BPSS1378 38 COG3544 COG3544, Uncharacterized protein conserved in bacteria Function unknown 53722124 Common - chaperone heat-shock protein BPSS1096 34 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 53721605 Common - hypothetical protein BPSS0569 28 COG0824 FcbC, Predicted thioesterase General function prediction only 53723167 Common - Acyl-CoA transferase/carnitine dehydratase protein BPSS2151 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 53722011 Common - hypothetical protein BPSS0988 90 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721095 Common - hypothetical protein BPSS0056 8 COG3794 PetE, Plastocyanin Energy production and conversion 53722846 Common - hypothetical protein BPSS1827 7 None None None 53721205 Common - hypothetical protein BPSS0169 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 53722105 Common - bacteriophage baseplate assembly protein V BPSS1078 34 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 53722564 Common bsaQ Type III secretion system protein BPSS1543 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 53721508 Pathogen - hypothetical protein BPSS0471 1 None None None 53722385 Common - two-component sensor kinase protein BPSS1360 221 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 53721710 Common - hypothetical protein BPSS0682 11 None None None 53722664 Common - LysR-family transcriptional regulator BPSS1643 124 COG0583 LysR, Transcriptional regulator Transcription 53723086 Common - short chain dehydrogenase BPSS2068 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722647 Common - type III secretion protein BPSS1624 71 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 53721761 Common - glycosyl transferase BPSS0735 112 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53722153 Common - riboflavin biosynthesis protein BPSS1125 198 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 53721824 Common - hypothetical protein BPSS0799 27 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 53723230 Common - hypothetical protein BPSS2213 28 COG2323 COG2323, Predicted membrane protein Function unknown 53723242 Pathogen - hypothetical protein BPSS2225 1 None None None 53721092 Common chrA chromate resistance transport protein BPSS0053 114 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 53721485 Pathogen - hypothetical protein BPSS0448 1 None None None 53722719 Common trpB tryptophan synthase subunit beta BPSS1699 225 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 53723035 Common - LysR-family transcriptional regulator BPSS2017 137 COG0583 LysR, Transcriptional regulator Transcription 53722797 Common - hypothetical protein BPSS1778 3 None None None 53722931 Pathogen - hypothetical protein BPSS1910 2 None None None 53722775 Common - hypothetical protein BPSS1754 18 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 53722409 Pathogen - hypothetical protein BPSS1383 1 None None None 53722727 Pathogen - lipoprotein BPSS1706a 1 COG5510 COG5510, Predicted small secreted protein Function unknown 53721334 Common - fatty-acid CoA ligase BPSS0299 201 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722470 Common - biotin-dependent carboxyl transferase BPSS1447 144 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 53721274 Common - hemin ABC transport system, ATP-binding protein BPSS0240 245 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 53721216 Common - hypothetical protein BPSS0180 20 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 53721672 Common - hypothetical protein BPSS0636 3 None None None 53721812 Common - transport system permease protein BPSS0788 134 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 53721841 Common - hypothetical protein BPSS0815 20 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 53722198 Common - non-ribosomal peptide synthase/polyketide synthase BPSS1170 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722419 Common sctT type III secretion-associated protein BPSS1392 38 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 53723342 Common - ABC-transporter ATP binding protein BPSS2325 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 53722780 Common - hypothetical protein BPSS1759 137 COG2081 COG2081, Predicted flavoproteins General function prediction only 53722128 Common - cation transport ATPase protein BPSS1100 229 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 53721780 Common - hypothetical protein BPSS0754 37 COG1289 COG1289, Predicted membrane protein Function unknown 53723021 Common - hypothetical protein BPSS2000 20 None None None 53721610 Common - FAD dependent oxidoreductase BPSS0574 133 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53721539 Common - transporter protein BPSS0503 203 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721646 Common - phosphoenolpyruvate phosphomutase BPSS0610 96 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 53722764 Pathogen - hypothetical protein BPSS1743 1 None None None 53722223 Pathogen - hypothetical protein BPSS1198 1 None None None 53721876 Common - hypothetical protein BPSS0849 24 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 53721521 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III BPSS0484 207 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 53721532 Common - hypothetical protein BPSS0496 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 53722760 Common - GntR-family regulatory protein BPSS1739 206 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53722876 Common - acyl-CoA dehydrogenase BPSS1857 141 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53722174 Common - formate hydrogenlyase subunit 4 BPSS1146 70 COG0650 HyfC, Formate hydrogenlyase subunit 4 Energy production and conversion 53722929 Common - MarR-family regulatory protein BPSS1908 21 COG1846 MarR, Transcriptional regulators Transcription 53721849 Pathogen - hypothetical protein BPSS0823 1 None None None 53722697 Common - hypothetical protein BPSS1677 5 None None None 53722189 Common - response regulator protein BPSS1161 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722712 Common purF amidophosphoribosyltransferase BPSS1692 239 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 53722874 Common - phosphoglycerate mutase family protein BPSS1855 23 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 53722000 Common - cytochrome c subunit II BPSS0977 64 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 53721344 Common - peptide synthase regulatory protein BPSS0309 22 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53721880 Common - ribokinase BPSS0853 144 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 53723184 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BPSS2168 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 53721113 Common - ABC transport system, membrane protein BPSS0076 185 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 53722803 Common - depolymerase BPSS1784 30 COG3509 LpqC, Poly(3-hydroxybutyrate) depolymerase Secondary metabolites biosynthesis, transport, and catabolism 53723320 Common - hypothetical protein BPSS2302 82 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 53721914 Common - hypothetical protein BPSS0890 44 COG0778 NfnB, Nitroreductase Energy production and conversion 53722018 Common - hypothetical protein BPSS0997 26 None None None 53721268 Common - cytochrome oxidase subunit II BPSS0234 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 53721198 Common - siderophore biosynthesis-related protein BPSS0162 49 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 53721187 Common - desaturase BPSS0151 13 COG3239 DesA, Fatty acid desaturase Lipid metabolism 53722821 Common - hypothetical protein BPSS1802 73 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 53723351 Common - hypothetical protein BPSS2334 5 None None None 53721220 Common - hypothetical protein BPSS0184 6 None None None 53721178 Common - sugar ABC transport system, ATP-binding protein BPSS0142 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 53722442 Common - dehydrogenase/oxidoreductase protein BPSS1415 156 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 53722715 Common folC folylpolyglutamate synthase/dihydrofolate synthase BPSS1695 217 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 53721820 Common - surface-exposed protein BPSS0796 27 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 53722801 Common ohr organic hydroperoxide resistance protein BPSS1782 96 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 53722756 Common - ABC transport system, membrane protein BPSS1735 203 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 53721947 Common - hydrolase BPSS0923 103 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53723363 Common - hypothetical protein BPSS2346 122 COG0431 COG0431, Predicted flavoprotein General function prediction only 53722745 Common - hypothetical protein BPSS1724 4 None None None 53721828 Common - hemolysin BPSS0803 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 53722769 Pathogen - hypothetical protein BPSS1748 1 None None None 53721612 Common braD high-affinity branched-chain amino acid transport system permease protein BPSS0576 154 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 53721059 Pathogen - hypothetical protein BPSS0020 1 None None None 53722034 Common - hypothetical protein BPSS1013 21 COG1846 MarR, Transcriptional regulators Transcription 53722979 Common - hypothetical protein BPSS1958 39 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 53723170 Common - MFS family transporter BPSS2154 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722346 Common - hypothetical protein BPSS1321 3 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 53722786 Common - osmotic adaptation-related protein BPSS1765 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53721225 Common - O-acetylhomoserine BPSS0190 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 53723336 Common lipA2 lipase precursor BPSS2319 34 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 53723163 Common - IS element protein BPSS2148 144 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 53721735 Common - sensor kinase protein BPSS0706 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53721548 Common - hypothetical protein BPSS0512 2 None None None 53722659 Common poxB pyruvate dehydrogenase BPSS1636 219 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 53721878 Common - nitrilotriacetate monooxygenase component A BPSS0851 56 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53721763 Common - hypothetical protein BPSS0737 9 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 53721756 Common - regulatory protein BPSS0730 67 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 53721157 Common - putative periplasmic chaperone protein BPSS0121 9 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 53722194 Common - transport/efflux protein BPSS1166 139 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722675 Common - cytochrome P450 BPSS1654 89 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 53721670 Common - hypothetical protein BPSS0634 48 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 53722828 Common - thioesterase BPSS1809 51 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53721241 Common prpB 2-methylisocitrate lyase BPSS0206 131 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 53721784 Common - hypothetical protein BPSS0758 45 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 53722474 Common - bifunctional protein BPSS1453 113 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 53722692 Common - monooxygenase BPSS1672 69 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53721284 Common - ABC transport system, membrane protein BPSS0250 54 COG4132 COG4132, ABC-type uncharacterized transport system, permease component General function prediction only 53723024 Common - transposase BPSS2005 57 None None None 53721614 Common livG leucine/isoleucine/valine transporter ATP-binding subunit BPSS0578 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 53721691 Pathogen - hypothetical protein BPSS0658 1 None None None 53722737 Common - hypothetical protein BPSS1716 2 COG2938 COG2938, Uncharacterized conserved protein Function unknown 53721321 Common - hypothetical protein BPSS0286 43 COG2510 COG2510, Predicted membrane protein Function unknown 53723069 Common - activator/secretion protein BPSS2052 56 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 53722004 Common hisQ histidine transport system permease protein BPSS0981 170 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 53722848 Common - glycosyltransferase BPSS1829 81 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53721524 Common - hypothetical protein BPSS0487 3 None None None 53722381 Common - hypothetical protein BPSS1356 13 COG3246 COG3246, Uncharacterized conserved protein Function unknown 53722324 Common pcaH protocatechuate 3,4-dioxygenase BPSS1300 52 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 53722831 Common - non-ribosomal peptide synthesis thioesterase BPSS1812 47 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53722699 Common - porin related exported protein BPSS1679 35 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721644 Common - TauD/TfdA family dioxygenase BPSS0608 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53722250 Common - hypothetical protein BPSS1227 65 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 53721182 Common - hypothetical protein BPSS0146 3 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721916 Common - IclR family regulatory protein BPSS0892 118 COG1414 IclR, Transcriptional regulator Transcription 53722384 Common - response regulator protein BPSS1359 190 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723156 Common oppB oligopeptide transport system permease protein BPSS2140 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 53721201 Common - dioxygenase BPSS0165 20 COG3384 COG3384, Uncharacterized conserved protein Function unknown 53723085 Common - aldose 1-epimerase BPSS2067 31 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 53721990 Common - hypothetical protein BPSS0967 12 COG4682 COG4682, Predicted membrane protein Function unknown 53722661 Common - hydratase BPSS1638 83 COG2030 MaoC, Acyl dehydratase Lipid metabolism 53722273 Common - acetylpolyamine aminohydrolase BPSS1250 155 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 53722126 Pathogen - hypothetical protein BPSS1098 1 None None None 53721777 Common - family S58 unassigned peptidase BPSS0751 59 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721445 Common - insertion element hypothetical protein BPSS0407 139 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722122 Common - hypothetical protein BPSS1094 19 None None None 53722595 Common tauA periplasmic component of taurine ABC transporter BPSS1574 100 COG4521 TauA, ABC-type taurine transport system, periplasmic component Inorganic ion transport and metabolism 53721701 Common - hypothetical protein BPSS0672 3 None None None 53722417 Common sctC type III secretion system protein BPSS1390 127 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 53723180 Common - acylphosphatase protein BPSS2164 63 COG1254 AcyP, Acylphosphatases Energy production and conversion 53723067 Common - IS element transposase BPSS2049 45 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722014 Common katB catalase precursor BPSS0993 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 53721150 Common - hypothetical protein BPSS0114 23 COG4455 ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion General function prediction only 53723235 Common rpoN RNA polymerase factor sigma-54 BPSS2218 143 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 53722963 Common - hypothetical protein BPSS1942 11 None None None 53721665 Pathogen - hypothetical protein BPSS0629 1 None None None 53722681 Pathogen - hypothetical protein BPSS1660 5 None None None 53722518 Common - hypothetical protein BPSS1496 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 53722354 Common - MFS family transport protein BPSS1329 191 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53721415 Common - DNA-binding regulatory protein BPSS0380 38 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 53721541 Common - AraC family regulatory protein BPSS0505 128 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53722405 Common - transmembrane transporter protein BPSS1379 119 COG1285 SapB, Uncharacterized membrane protein Function unknown 53722706 Common - hypothetical protein BPSS1686 3 None None None 53721955 Common - hypothetical protein BPSS0931 2 None None None 53722968 Common - ATP synthase B subunit BPSS1947 7 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 53721197 Common - siderophore biosynthesis-related protein BPSS0161 15 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53723071 Common - hypothetical protein BPSS2054 63 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 53722578 Common - glyoxalase BPSS1557 8 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 53721269 Common - cytochrome oxidase subunit I BPSS0235 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 53721740 Common alr alanine racemase BPSS0711 198 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 53722081 Common - partition protein BPSS1055 115 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 53721260 Common - hypothetical protein BPSS0225 9 COG4461 LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein Function unknown 53721189 Common gltI glutamate/aspartate periplasmic binding protein precursor BPSS0153 125 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 53722609 Common - LysR-family transcriptional regulator BPSS1586 94 COG0583 LysR, Transcriptional regulator Transcription 53723238 Common - hypothetical protein BPSS2221 20 COG3685 COG3685, Uncharacterized protein conserved in bacteria Function unknown 53721390 Common tyrB aromatic amino acid aminotransferase BPSS0355 74 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 53721770 Common - methylmalonate-semialdehyde dehydrogenase BPSS0743 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721515 Common - hypothetical protein BPSS0478 41 COG4125 COG4125, Predicted membrane protein Function unknown 53722131 Pathogen - periplasmic thiamine binding protein BPSS1103 2 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53722946 Common - hypothetical protein BPSS1925 13 None None None 53721865 Common - hypothetical protein BPSS0839 43 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53721657 Common - enoyl-CoA hydratase BPSS0621 186 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53722242 Common - penicillin-binding protein BPSS1219 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 53721502 Common potH putrescine ABC transport system, permease protein BPSS0465 205 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 53722501 Common rspB zinc-containing alcohol dehydrogenase BPSS1478a 207 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53723113 Common - hypothetical protein BPSS2099 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 53721673 Common - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein BPSS0639 58 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 53721437 Pathogen - bacteriophage protein Gp46 BPSS0399 1 None None None 53721312 Common - methyltransferase BPSS0277 47 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 53721871 Common proY proline-specific permease BPSS0845 181 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 53721052 Common - hypothetical protein BPSS0013 21 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 53722813 Common - hypothetical protein BPSS1794 49 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53723121 Common - hypothetical protein BPSS2107 26 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 53721319 Common - IclR-family transcriptional regulator BPSS0284 116 COG1414 IclR, Transcriptional regulator Transcription 53721470 Common - hypothetical protein BPSS0432 148 COG1741 COG1741, Pirin-related protein General function prediction only 53721995 Common - hypothetical protein BPSS0972 6 COG5598 COG5598, Trimethylamine:corrinoid methyltransferase Coenzyme metabolism 53722726 Common leuD isopropylmalate isomerase small subunit BPSS1706 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 53722437 Pathogen - hypothetical protein BPSS1410 4 None None None 53722454 Common - hypothetical protein BPSS1427 32 COG0431 COG0431, Predicted flavoprotein General function prediction only 53722366 Common - cysteine desulfurase BPSS1341 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 53721973 Common - ABC transporter system, ATP-binding protein BPSS0950 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 53721370 Common - oxidoreductase BPSS0335 54 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 53721124 Common - cytochrome C oxidase-related protein BPSS0086 172 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 53722165 Common - hypothetical protein BPSS1137 22 COG0679 COG0679, Predicted permeases General function prediction only 53722811 Common - LysR-family transcriptional regulator BPSS1792 134 COG0583 LysR, Transcriptional regulator Transcription 53721364 Common - fatty aldehyde dehydrogenase BPSS0329 171 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722135 Common - hypothetical protein BPSS1107 5 None None None 53722545 Common bopA intercellular spread protein BPSS1524 3 None None None 53721358 Common - hypothetical protein BPSS0323 67 COG1556 COG1556, Uncharacterized conserved protein Function unknown 53721846 Common - tRNA synthetase BPSS0820 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 53723029 Common - outer membrane protein BPSS2011 5 None None None 53721833 Common tyrB1 aromatic amino acid aminotransferase BPSS0808 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 53721934 Common - hypothetical protein BPSS0910 11 None None None 53722067 Common - hypothetical protein BPSS1046 28 COG2606 EbsC, Uncharacterized conserved protein Function unknown 53721510 Common - aldehyde dehydrogenase BPSS0473 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721606 Common - hypothetical protein BPSS0570 100 COG0657 Aes, Esterase/lipase Lipid metabolism 53722329 Common - ABC transport permease BPSS1305 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 53722588 Common - hypothetical protein BPSS1567 24 COG3826 COG3826, Uncharacterized protein conserved in bacteria Function unknown 53723033 Common - inner membrane glycosyltransferase BPSS2015 167 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53721853 Common - subfamily M9A unassigned peptidase BPSS0827 15 None None None 53722099 Common - bacteriophage protein BPSS1073 3 None None None 53723340 Common - hypothetical protein BPSS2323 16 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 53721982 Common - hypothetical protein BPSS0959 8 COG5435 COG5435, Uncharacterized conserved protein Function unknown 53721236 Common pip prolyl iminopeptidase BPSS0201 111 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722016 Common - AraC family regulatory protein BPSS0995 19 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722263 Common ftsI penicillin-binding protein BPSS1240 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 53721596 Common - choline-sulfatase BPSS0560 90 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 53721380 Common - ABC transport system, ATP-binding protein BPSS0345 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 53721855 Common - putative monooxygenase BPSS0829 127 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 53723210 Common - hypothetical protein BPSS2193 10 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 53723264 Common - sensor kinase/response regulator fusion protein BPSS2246 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53721924 Common - IclR family regulatory protein BPSS0900 118 COG1414 IclR, Transcriptional regulator Transcription 53722854 Common - LPS biosynthesis mannose-1-phosphate guanylyltransferase BPSS1835 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 53721989 Common - manganese transport protein BPSS0966 100 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 53723011 Common - hypothetical protein BPSS1990 92 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 53723313 Common - hypothetical protein BPSS2295 57 COG3246 COG3246, Uncharacterized conserved protein Function unknown 53722074 Pathogen - hypothetical bacteriophage protein BPSS1048d 1 None None None 53721461 Common - aminotransferase BPSS0422 196 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 53722645 Pathogen - type III secretion protein BPSS1622 4 None None None 53721472 Pathogen - hypothetical protein BPSS0434 2 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 53721908 Common - hypothetical protein BPSS0884 5 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 53721561 Common - hypothetical protein BPSS0525 9 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 53722296 Common - polyketide synthase related protein BPSS1274 206 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721634 Common - hypothetical protein BPSS0598 2 None None None 53721152 Common - chaperone-related protein BPSS0116 214 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 53723041 Pathogen - hypothetical protein BPSS2023 1 None None None 53723206 Common - pilus assembly-related, exported protein BPSS2189 64 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 53723256 Common - short-chain dehydrogenase BPSS2238 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721581 Common fdhA glutathione-independent formaldehyde dehydrogenase BPSS0545 193 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53722060 Common irlS transmembrane invasion-related two-component sensor protein BPSS1039 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53723198 Common - hypothetical protein BPSS2181 43 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 53721087 Common pcaK 4-hydroxybenzoate transporter BPSS0048 76 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53722863 Common - hypothetical protein BPSS1844 42 COG3795 COG3795, Uncharacterized protein conserved in bacteria Function unknown 53723354 Common glnH glutamine ABC transporter periplasmic protein BPSS2337 179 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 53723328 Common - acetyltransferase (GNAT) family protein BPSS2310 33 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 53722233 Common - hypothetical protein BPSS1210 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 53722938 Common - crp-family transcriptional regulator BPSS1917 130 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 53721420 Common - DNA-binding protein BPSS0383 26 COG3311 AlpA, Predicted transcriptional regulator Transcription 53722772 Common - NAD-dependent deacetylase BPSS1751 149 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 53722229 Common - iron transport receptor protein BPSS1204 106 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 53721895 Pathogen - hypothetical protein BPSS0871 1 None None None 53721835 Common - hypothetical protein BPSS0810 45 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 53722538 Pathogen - hypothetical protein BPSS1517 1 None None None 53723283 Common - monooxygenase protein BPSS2265 64 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53721888 Common - aldo/keto reductase family protein BPSS0864 198 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 53722306 Common - hypothetical protein BPSS1283 116 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 53721499 Common - oxidoreductase BPSS0462 117 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53721553 Common - hypothetical protein BPSS0517 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 53722720 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase BPSS1700 193 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 53722485 Common - transmembrane NADPH flavoprotein BPSS1464 105 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 53721230 Common - hypothetical protein BPSS0195 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 53722513 Common - hypothetical protein BPSS1491 5 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 53721111 Pathogen - hypothetical protein BPSS0074 1 None None None 53721551 Common - hypothetical protein BPSS0515 13 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 53722895 Common - chemotaxis-related protein BPSS1875 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53722620 Common pilQ type IV pilus biosynthesis protein BPSS1597 198 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 53722090 Common - bacteriophage protein BPSS1064 22 None None None 53722559 Common bsaV surface presentation of antigens protein BPSS1538 6 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 53722596 Common tauD taurine dioxygenase BPSS1575 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53722319 Common aroG phospho-2-dehydro-3-deoxyheptonate aldolase BPSS1295 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 53722994 Common - sedolisin-B BPSS1973 23 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 53723073 Common - hypothetical protein BPSS2056 59 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53721452 Common - acetolactate synthase BPSS0414 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 53721454 Pathogen - lipoprotein BPSS0416 1 None None None 53722106 Common - bacteriophage baseplate assembly protein W BPSS1079 29 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 53723104 Pathogen - hypothetical protein BPSS2089 1 None None None 53722173 Common - hypothetical protein BPSS1145 34 COG4237 HyfE, Hydrogenase 4 membrane component (E) Energy production and conversion 53723344 Common - cytochrome P450 family protein BPSS2327 94 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 53722026 Common - sodium/hydrogen exchanger family protein BPSS1005 76 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 53721040 Common - hypothetical protein BPSS0001 16 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 53722575 Pathogen - hypothetical protein BPSS1554 1 None None None 53722880 Common - hypothetical protein BPSS1861 51 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 53721745 Common - hypothetical protein BPSS0716 26 COG1647 COG1647, Esterase/lipase General function prediction only 53721068 Common - transport-related membrane protein BPSS0029 83 COG1279 COG1279, Lysine efflux permease General function prediction only 53721141 Common - hypothetical protein BPSS0103 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 53722520 Common - hypothetical protein BPSS1498 7 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 53722608 Pathogen - hypothetical protein BPSS1585 1 None None None 53723293 Common - hypothetical protein BPSS2275 13 None None None 53722213 Common - hypothetical protein BPSS1185a 2 None None None 53721792 Common - voltage gated chloride channel BPSS0766 142 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 53722284 Common - hypothetical protein BPSS1262 7 None None None 53722989 Common - dehydrogenase BPSS1968 234 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 53721867 Common - hypothetical protein BPSS0841 17 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 53721074 Common - gluconolactonase BPSS0035 83 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 53721530 Pathogen - hypothetical protein BPSS0494 1 None None None 53722484 Common - hypothetical protein BPSS1463 14 COG3656 COG3656, Predicted periplasmic protein Function unknown 53722460 Common - sodium bile acid symporter family protein BPSS1433 128 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 53722916 Common cyoC cytochrome O ubiquinol oxidase subunit III BPSS1895 158 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 53721061 Common - PadR-like family regulatory protein BPSS0022 58 COG1695 COG1695, Predicted transcriptional regulators Transcription 53723054 Common - AMP-binding acetyl-CoA synthetase BPSS2036 207 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 53722372 Common - HlyD family efflux pump protein BPSS1347 115 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 53721988 Common - oxalate decarboxylase BPSS0965 16 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 53721537 Common - transglutaminase-like superfamily protein BPSS0501 101 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 53721489 Common - phosphoesterase BPSS0452 85 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 53722196 Common - acetyltransferase protein BPSS1168 9 COG0456 RimI, Acetyltransferases General function prediction only 53723118 Common - hypothetical protein BPSS2104 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 53722956 Pathogen - TetR-family transcriptional regulator BPSS1935 2 COG1309 AcrR, Transcriptional regulator Transcription 53723091 Common - GntR family regulator protein BPSS2073 100 COG2186 FadR, Transcriptional regulators Transcription 53723082 Common - porin protein BPSS2064 24 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721685 Common - hypothetical protein BPSS0651 21 COG3070 TfoX, Regulator of competence-specific genes Transcription 53722654 Common - hypothetical protein BPSS1631 22 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53721404 Common - bacterioferritin ferredoxin protein BPSS0369 24 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 53722616 Common pilV type IV pilus biosynthesis protein BPSS1593 7 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 53723367 Common - partition protein ParA BPSS2349 200 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 53721346 Common - multifunctional polyketide-peptide syntase BPSS0311 236 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721172 Common - hypothetical protein BPSS0136 174 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 53722315 Common - DEAD/DEAH box helicase BPSS1291 217 COG1201 Lhr, Lhr-like helicases General function prediction only 53721179 Common - ROK family transcriptional regulator BPSS0143 143 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 53721704 Common - GerR family regulatory protein BPSS0675 22 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722423 Pathogen - hypothetical protein BPSS1396 1 None None None 53722529 Common - hypothetical protein BPSS1507 12 None None None 53722670 Common - sugar-binding protein BPSS1649 22 None None None 53721397 Common - hypothetical protein BPSS0362 5 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 53722823 Common - hypothetical protein BPSS1804 2 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 53722359 Common - hypothetical protein BPSS1334 2 None None None 53722925 Common benB benzoate 1,2-dioxygenase beta subunit BPSS1904 19 COG5517 COG5517, Small subunit of phenylpropionate dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53722982 Pathogen - hypothetical protein BPSS1961 1 None None None 53722002 Common - porin protein BPSS0979 22 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721106 Common - AraC family regulatory protein BPSS0066 86 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721308 Common - TetR-family regulatory protein BPSS0273 69 COG1309 AcrR, Transcriptional regulator Transcription 53721968 Common - LysR family regulatory protein BPSS0944 186 COG0583 LysR, Transcriptional regulator Transcription 53721447 Common - hypothetical protein BPSS0409 4 None None None 53722632 Pathogen - hypothetical protein BPSS1609 1 None None None 53722048 Common - RNA polymerase sigma factor BPSS1027 58 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 53723007 Pathogen - hypothetical protein BPSS1986 1 None None None 53721492 Common - copper resistance-related lipoprotein BPSS0455 24 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53722552 Pathogen bipC cell invasion protein BPSS1531 1 None None None 53721429 Common - phage-related hypothetical protein BPSS0391 33 COG1598 COG1598, Uncharacterized conserved protein Function unknown 53723333 Common - hypothetical protein BPSS2316 44 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 53723139 Common lldA L-lactate dehydrogenase BPSS2125 112 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 53722743 Common mdh malate dehydrogenase BPSS1722 144 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 53721787 Common codA cytosine deaminase BPSS0761 73 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 53721929 Common - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein BPSS0905 32 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 53721563 Pathogen - hypothetical protein BPSS0527 2 None None None 53722334 Common - BCCT (betaine/carnitine/choline) family transporter BPSS1310 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 53722951 Common - ABC transport system, exported protein BPSS1930 12 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 53721579 Common - levansucrase precursor BPSS0543 16 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 53722795 Common - hypothetical protein BPSS1774 14 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 53721754 Common - GntR family regulatory protein BPSS0726 163 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53721163 Common glxK glycerate kinase 1 BPSS0127 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 53722142 Common ftsH FtsH-2 protease BPSS1114 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 53722055 Common - hypothetical protein BPSS1034 9 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 53722902 Common - hypothetical protein BPSS1881 49 COG2733 COG2733, Predicted membrane protein Function unknown 53721253 Common - isomerase BPSS0218 30 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 53722472 Common - TetR family transcriptional regulator BPSS1449 86 COG1309 AcrR, Transcriptional regulator Transcription 53723132 Common - ArsR family transcriptional regulator BPSS2118 125 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 53721782 Pathogen - hypothetical protein BPSS0756 1 None None None 53721219 Common - hypothetical protein BPSS0183 77 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 53722121 Common - hydratase protein BPSS1093 39 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 53723309 Common - GerE family regulatory protein BPSS2291 86 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 53721804 Common - aldehyde dehydrogenase family protein BPSS0780 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721706 Common - asparagine synthetase BPSS0677 148 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 53723245 Pathogen - hypothetical protein BPSS2227A 1 None None None 53721970 Common penA beta-lactamase precursor BPSS0946 61 COG2367 PenP, Beta-lactamase class A Defense mechanisms 53721906 Common - hypothetical protein BPSS0882 176 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 53722410 Common - rotamase BPSS1383a 95 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 53722735 Common - AraC-family transcriptional regulator BPSS1714 36 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721714 Common - hypothetical protein BPSS0686 68 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53722593 Common tauC permease component of taurine ABC transporter BPSS1572 207 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 53721427 Common - hypothetical protein BPSS0389 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 53722560 Pathogen - hypothetical protein BPSS1539 1 None None None 53721480 Common - hypothetical protein BPSS0442 4 None None None 53721630 Common - hypothetical protein BPSS0594 82 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721180 Common - amylase BPSS0144 26 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 53721616 Common - subfamily M23A unassigned peptidase BPSS0580 66 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 53722388 Common - hypothetical protein BPSS1363 3 None None None 53721090 Common - hypothetical protein BPSS0051 13 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721487 Common - DJ-1/PfpI family protein BPSS0450 23 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721810 Common - ABC transporter, periplasmic binding protein BPSS0786 60 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53722724 Common asd aspartate-semialdehyde dehydrogenase BPSS1704 201 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 53721122 Common - hypothetical protein BPSS0083 2 None None None 53721184 Common - subfamily M20D non-peptidase homologue BPSS0148 171 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 53722808 Common modE molybdenum transport protein BPSS1789 83 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 53721642 Common - LysR family regulatory protein BPSS0606 126 COG0583 LysR, Transcriptional regulator Transcription 53722482 Common - two-component response regulator BPSS1461 211 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723065 Common - chrolohydrolase BPSS2047 130 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 53721977 Common - extracellular solute-binding protein BPSS0954 190 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 53721992 Common - molybdopterin oxidoreductase BPSS0969 174 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 53721608 Common - short-chain dehydrogenase BPSS0572 217 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722006 Common hisP histidine transport ATP-binding protein BPSS0983 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 53723087 Common - ABC transporter, ATP-binding protein BPSS2069 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 53721698 Common - hypothetical protein BPSS0669 61 COG3214 COG3214, Uncharacterized protein conserved in bacteria Function unknown 53723057 Common - cyclopropane-fatty-acyl-phospholipid synthase BPSS2039 126 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 53722400 Common - glutathione-S-transferase BPSS1374 16 None None None 53723000 Pathogen - hypothetical protein BPSS1979 1 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 53723182 Pathogen - hypothetical protein BPSS2166 1 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 53722793 Pathogen - hypothetical protein BPSS1772 1 None None None 53722694 Common - hypothetical protein BPSS1674 87 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 53722178 Pathogen - phosphocarrier protein BPSS1150 1 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 53722516 Common - two-component response regulator protein BPSS1494 205 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53721245 Common - hypothetical protein BPSS0210 72 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 53721191 Common - LysR-family transcriptional regulator BPSS0155 187 COG0583 LysR, Transcriptional regulator Transcription 53721400 Common - LysR-family transcriptional regulator BPSS0365 185 COG0583 LysR, Transcriptional regulator Transcription 53722030 Common - polyketide synthase BPSS1009 176 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721760 Common oprM outer membrane efflux protein BPSS0734 107 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53723324 Common - porin protein BPSS2306 29 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722182 Common narK nitrate/nitrite transporter BPSS1154 112 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 53722717 Common trpA tryptophan synthase subunit alpha BPSS1697 214 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 53722344 Common - hypothetical protein BPSS1319 46 COG5470 COG5470, Uncharacterized conserved protein Function unknown 53721939 Common - hypothetical protein BPSS0915 2 None None None 53722872 Common - short chain dehydrogenase BPSS1853 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722977 Common - acetate kinase BPSS1956 161 COG0282 ackA, Acetate kinase Energy production and conversion 53721099 Pathogen - hypothetical protein BPSS0060 1 None None None 53721082 Common pcaI 3-oxoadipate CoA-transferase subunit A BPSS0043 96 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 53721733 Common - periplasmic solute-binding protein BPSS0704 70 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 53723310 Common - hypothetical protein BPSS2292 2 None None None 53722476 Common - hypothetical protein BPSS1455 16 None None None 53722747 Common acnA aconitate hydratase BPSS1726 223 COG1048 AcnA, Aconitase A Energy production and conversion 53722163 Common - hydroxyethylthioazole kinase BPSS1135 72 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 53721243 Common acnA aconitate hydratase BPSS0208 223 COG1048 AcnA, Aconitase A Energy production and conversion 53721669 Common mreB rod shape-determining protein BPSS0633 172 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 53721918 Common - Rieske [2Fe-2S] domain protein BPSS0894 89 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 53723189 Common - hypothetical protein BPSS2172a 29 COG2879 COG2879, Uncharacterized small protein Function unknown 53723338 Common - hypothetical protein BPSS2321 5 None None None 53721925 Common - short chain dehydrogenase BPSS0901 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721997 Common - subfamily S8A unassigned peptidase BPSS0974 128 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 53722767 Common - lipoprotein BPSS1746 169 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 53721799 Common - MarR family regulatory protein BPSS0772 42 COG1846 MarR, Transcriptional regulators Transcription 53721323 Common - lipoprotein BPSS0288 11 COG5042 NUP, Purine nucleoside permease Nucleotide transport and metabolism 53722220 Common - non-ribosomal peptide synthase BPSS1195 3 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721085 Common - lactone hydrolase BPSS0046 161 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53721659 Common - outer membrane efflux protein BPSS0623 121 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53721318 Common - hypothetical protein BPSS0283 38 COG1288 COG1288, Predicted membrane protein Function unknown 53721277 Common - hemin ABC transport system-related protein BPSS0243 40 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 53722395 Common soxB sarcosine oxidase beta subunit BPSS1369 124 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53721772 Common - lipase BPSS0746 24 COG2267 PldB, Lysophospholipase Lipid metabolism 53723031 Common - hypothetical protein BPSS2013 3 COG5373 COG5373, Predicted membrane protein Function unknown 53722885 Common - lipoprotein BPSS1866 11 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 53722078 Common - hypothetical bacteriophage replication protein BPSS1052 17 None None None 53721137 Common - hypothetical protein BPSS0099 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 53721873 Common - hypothetical protein BPSS0846 8 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53721224 Common - dehydrogenase BPSS0188 96 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 53722046 Common - lipoprotein BPSS1025 37 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 53722156 Common - major facilitator superfamily transporter homolog BPSS1128 171 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722974 Common atpD F0F1 ATP synthase subunit beta BPSS1953 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 53722851 Common - exopolysaccharide (EPS) biosynthesis related low molecular weight protein-tyrosine-phosphatase BPSS1832 29 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 53722836 Common - hypothetical protein BPSS1817 13 COG3832 COG3832, Uncharacterized conserved protein Function unknown 53721229 Common - hypothetical protein BPSS0194 114 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 53721360 Common - hypothetical protein BPSS0325 35 COG2259 COG2259, Predicted membrane protein Function unknown 53723176 Common - outer membrane porin protein BPSS2160 13 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722543 Common - two-component response regulator BPSS1522 202 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722278 Common - short-chain type dehydrogenase/reductase BPSS1256 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721295 Common - kinase BPSS0261 72 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 53721759 Common - methyl-accepting chemotaxis protein BPSS0733 100 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53722503 Common - hypothetical protein BPSS1481 31 None None None 53722065 Pathogen - bacteriophage protein BPSS1044 1 None None None 53721728 Common - AraC family regulatory protein BPSS0699 85 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53723358 Common estC esterase BPSS2341 35 COG2267 PldB, Lysophospholipase Lipid metabolism 53721971 Common - LysR family regulatory protein BPSS0948 178 COG0583 LysR, Transcriptional regulator Transcription 53722435 Pathogen - hypothetical protein BPSS1408 1 None None None 53723317 Common - molybdopterin oxidoreductase BPSS2299 184 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 53721802 Common - hypothetical protein BPSS0778 27 COG5649 COG5649, Uncharacterized conserved protein Function unknown 53722151 Common - hypothetical protein BPSS1123 30 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 53721831 Common - leucine-responsive regulatory protein BPSS0806 148 COG1522 Lrp, Transcriptional regulators Transcription 53722758 Common - ABC transport system, exported protein BPSS1737 86 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 53721675 Common - hypothetical protein BPSS0641 27 COG4312 COG4312, Uncharacterized protein conserved in bacteria Function unknown 53722377 Common - fatty acid biosynthetic protein BPSS1352 5 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722841 Common - hypothetical protein BPSS1822 24 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 53723202 Pathogen - pilus subunit protein BPSS2185 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 53722209 Common - surfactin/non-ribosomally encoded peptide/polyketide synthase BPSS1181 218 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721747 Common - TetR-family regulatory protein BPSS0718 87 COG1309 AcrR, Transcriptional regulator Transcription 53722108 Common - bacteriophage tail protein I BPSS1081 26 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 53722433 Pathogen - hypothetical protein BPSS1406 1 None None None 53723303 Common - ulfate transporter family protein BPSS2285 116 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 53722935 Common - hypothetical protein BPSS1914 23 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 53723295 Pathogen - hypothetical protein BPSS2277 1 None None None 53722390 Common rpsU 30S ribosomal protein S21 BPSS1364a 67 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 53723136 Pathogen - hypothetical protein BPSS2122 1 None None None 53723233 Pathogen - hypothetical protein BPSS2216 1 COG5487 COG5487, Small integral membrane protein Function unknown 53722096 Pathogen - bacteriophage membrane protein BPSS1070 3 None None None 53722790 Common ndh NADH dehydrogenase BPSS1769 171 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 53722965 Common adhA alcohol dehydrogenase BPSS1944 213 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 53722784 Common ispA geranyltranstransferase BPSS1763 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 53722032 Common - transmembrane transport protein BPSS1011 167 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53723221 Common - GntR-family regulatory protein BPSS2204 45 COG2186 FadR, Transcriptional regulators Transcription 53721155 Common - two-component system response regulator BPSS0119 175 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722202 Common - non-ribosomal peptide/polyketide synthase BPSS1174 204 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721374 Common - amino acid dioxygenase BPSS0339 83 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 53723179 Common - hypothetical protein BPSS2163 48 COG2962 RarD, Predicted permeases General function prediction only 53722171 Common - formate hydrogenlyase/hydrogenase/NADH dehydrogenase subunit BPSS1143 79 COG3261 HycE, Ni,Fe-hydrogenase III large subunit Energy production and conversion 53722271 Common folE GTP cyclohydrolase I BPSS1248 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 53722237 Pathogen - transcriptional regulator BPSS1214 1 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53721270 Common ltaE L-allo-threonine aldolase BPSS0236 99 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 53721417 Pathogen - hypothetical protein BPSS0380B 1 None None None 53721495 Common - copper-resistance exported protein BPSS0458 28 COG2372 CopC, Uncharacterized protein, homolog of Cu resistance protein CopC General function prediction only 53722230 Common - hypothetical protein BPSS1205 70 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 53722818 Common - hypothetical protein BPSS1799 82 COG2606 EbsC, Uncharacterized conserved protein Function unknown 53722858 Common - oxidative stress related rubrerythrin protein BPSS1839 79 COG1592 COG1592, Rubrerythrin Energy production and conversion 53722779 Common rpsU 30S ribosomal protein S21 BPSS1758 74 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 53723009 Pathogen - hypothetical protein BPSS1988 1 None None None 53721132 Common - fimbria subunit protein BPSS0094 17 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 53721742 Common - hypothetical protein BPSS0713 80 COG1262 COG1262, Uncharacterized conserved protein Function unknown 53721211 Pathogen - hypothetical protein BPSS0175 1 None None None 53721392 Common - hypothetical protein BPSS0357 24 COG3470 Tpd, Uncharacterized protein probably involved in high-affinity Fe2+ transport Inorganic ion transport and metabolism 53722948 Common - methyl-accepting chemotaxis protein BPSS1927 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53722511 Common - hypothetical protein BPSS1489 75 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 53721282 Common - ABC transport system, ATP-binding protein BPSS0248 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 53722133 Common - methyltransferase protein BPSS1105 5 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 53723269 Common - LPS biosynthesis related transferase BPSS2251 17 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 53721500 Common - hypothetical protein BPSS0463 3 None None None 53721513 Common groES co-chaperonin GroES BPSS0476 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 53722248 Pathogen - hypothetical protein BPSS1225 1 None None None 53721945 Common - hypothetical protein BPSS0921 99 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 53721897 Common - porin protein BPSS0873 15 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722111 Common - bacteriophage major tail sheath protein BPSS1084 32 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 53722207 Pathogen - hypothetical protein BPSS1179 1 None None None 53722770 Common gnd 6-phosphogluconate dehydrogenase BPSS1749 188 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 53721609 Pathogen - hypothetical protein BPSS0573 1 None None None 53722361 Common - acetyltransferase protein BPSS1336 55 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 53721208 Common - hypothetical protein BPSS0172 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 53723204 Common - pilus assembly-related outer membrane protein BPSS2187 4 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 53721049 Common - hypothetical protein BPSS0010 15 COG3608 COG3608, Predicted deacylase General function prediction only 53721118 Common - hypothetical protein BPSS0080 4 None None None 53722890 Common - chemotaxis-specific methylesterase BPSS1870 178 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 53721468 Pathogen - hypothetical protein BPSS0429 1 None None None 53721497 Common - methyl-accepting chemotaxis protein BPSS0460 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53721577 Common - HlyD family secretion protein BPSS0541 115 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 53721860 Pathogen - hypothetical protein BPSS0834 1 None None None 53722893 Common - chemotaxis-related methyltranferase protein BPSS1873 148 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 53722532 Common - hypothetical protein BPSS1510 4 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 53722613 Pathogen - hypothetical protein BPSS1590 1 None None None 53722856 Common - hypothetical protein BPSS1837 14 None None None 53723026 Common - hypothetical protein BPSS2007 10 None None None 53721143 Common - hypothetical protein BPSS0105 60 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53722987 Common - LysR-family transcriptional regulator BPSS1966 162 COG0583 LysR, Transcriptional regulator Transcription 53721869 Common - short chain dehydrogenase BPSS0843 68 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 53721883 Common - hypothetical protein BPSS0856 56 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 53721790 Common - short chain dehydrogenase BPSS0764 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722701 Common - hypothetical protein BPSS1681 77 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 53723224 Common - LysR-family transcriptional regulator BPSS2207 174 COG0583 LysR, Transcriptional regulator Transcription 53721529 Common - chitin-binding protein BPSS0493 20 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 53722826 Common mhpE 4-hydroxy-2-ketovalerate aldolase BPSS1807 213 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 53721076 Pathogen - hypothetical protein BPSS0037 1 COG5453 COG5453, Uncharacterized conserved protein Function unknown 53722227 Common - hypothetical protein BPSS1202 22 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 53722627 Common - probable two-component system response regulator BPSS1604 205 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53723159 Common - POT-family proton dependent transporter BPSS2143 80 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 53722215 Common - monooxygenase BPSS1190 112 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 53721042 Pathogen - hypothetical protein BPSS0003 1 None None None 53723106 Common - hypothetical protein BPSS2091 54 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 53723100 Common - extracellular solute-binding protein BPSS2084 97 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53723288 Common lpdV dihydrolipoamide dehydrogenase BPSS2270 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 53721857 Pathogen - hypothetical protein BPSS0831 1 None None None 53722639 Common - type III secretion protein BPSS1616 86 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 53721711 Pathogen - hypothetical protein BPSS0683 1 None None None 53723267 Common - sigma-54 interacting response regulator BPSS2249 175 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 53721617 Common pchA salicylate biosynthesis isochorismate synthase BPSS0581 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721651 Common - hypothetical protein BPSS0615 64 COG1030 NfeD, Membrane-bound serine protease (ClpP class) Posttranslational modification, protein turnover, chaperones 53721356 Common - hypothetical protein BPSS0321 158 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 53722606 Common hipB transcription regulator BPSS1583 14 COG1476 COG1476, Predicted transcriptional regulators Transcription 53721594 Common - formyltetrahydrofolate deformylase BPSS0558 214 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 53722301 Common - TetR family regulatory protein BPSS1278a 21 COG1309 AcrR, Transcriptional regulator Transcription 53722838 Common - serine/threonine protein phosphatase BPSS1819 82 None None None 53722076 Pathogen - hypothetical bacteriophage protein BPSS1050 1 None None None 53721234 Common - LysR-family transcriptional regulator BPSS0199 192 COG0583 LysR, Transcriptional regulator Transcription 53722044 Common - hypothetical protein BPSS1023 23 COG5662 COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) Transcription 53722657 Common - probable non-ribosomal peptide synthetase BPSS1634 217 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721844 Common - hypothetical protein BPSS0818 4 None None None 53723315 Common - hypothetical protein BPSS2297 49 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 53722499 Common - GntR family transcriptional regulator protein BPSS1477 116 COG1802 GntR, Transcriptional regulators Transcription 53723254 Common - hypothetical protein BPSS2236 6 None None None 53723352 Common glnQ glutamine ABC transporter ATP-binding protein BPSS2335 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 53723209 Common - hypothetical protein BPSS2192 8 COG4655 COG4655, Predicted membrane protein Function unknown 53723013 Common - x-prolyl-dipeptidyl aminopeptidase BPSS1992 24 COG2936 COG2936, Predicted acyl esterases General function prediction only 53721477 Common - hypothetical protein BPSS0439 74 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 53721348 Common - lipoprotein BPSS0313 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 53723347 Common - hypothetical protein BPSS2330 29 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 53721636 Pathogen - hypothetical protein BPSS0600 1 None None None 53722557 Common bsaX surface presentation of antigens protein BPSS1536 66 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 53722425 Pathogen - hypothetical protein BPSS1398 1 None None None 53722349 Common - 1-aminocyclopropane-1-carboxylate deaminase BPSS1324 88 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 53722200 Common - non-ribosomal peptide synthase/polyketide synthase BPSS1172 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722469 Common - enoyl-CoA hydratase BPSS1446 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53723111 Common - hypothetical protein BPSS2097 17 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 53722650 Common - type III secretion system ATPase BPSS1627 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 53723259 Pathogen - hypothetical protein BPSS2241 1 None None None 53721626 Common pchI probable ATP-binding component of ABC transporter BPSS0590 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 53722168 Common - universal stress family protein BPSS1140 76 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53721055 Common - phospholipase BPSS0016 47 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 53722585 Common - AsnC-family transcriptional regulator BPSS1564 156 COG1522 Lrp, Transcriptional regulators Transcription 53721108 Common - hypothetical protein BPSS0068 7 None None None 53722286 Common - hypothetical protein BPSS1264 141 COG1360 MotB, Flagellar motor protein Cell motility and secretion 53722733 Common - hypothetical protein BPSS1712 11 None None None 53722332 Common - asparaginase BPSS1308 84 COG1446 COG1446, Asparaginase Amino acid transport and metabolism 53722449 Common - hypothetical protein BPSS1422 36 COG3555 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases Posttranslational modification, protein turnover, chaperones 53722244 Common - short chain dehydrogenase BPSS1221 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722235 Common - hypothetical protein BPSS1212 6 None None None 53721490 Pathogen - hypothetical protein BPSS0453 1 None None None 53722053 Common - sugar ABC transporter ATP-binding component BPSS1032 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 53722996 Common - hypothetical protein BPSS1975 6 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 53721565 Pathogen - lipoprotein BPSS0529 2 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 53721217 Common - hypothetical protein BPSS0181 57 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53722440 Common - hydrolase protein BPSS1413 11 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 53722024 Pathogen - hypothetical protein BPSS1003 1 None None None 53722868 Common - hypothetical protein BPSS1849 2 None None None 53721165 Common - transcriptional regulator BPSS0129 49 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 53721288 Common - ribose 5-phosphate isomerase BPSS0254 129 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 53722184 Common narI respiratory nitrate reductase subunit BPSS1156 58 COG2181 NarI, Nitrate reductase gamma subunit Energy production and conversion 53722144 Common - hypothetical protein BPSS1116 62 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 53721941 Common - hypothetical protein BPSS0917 17 COG3554 COG3554, Uncharacterized protein conserved in bacteria Function unknown 53722339 Pathogen - hypothetical protein BPSS1314 1 None None None 53721406 Common bfr bacterioferritin BPSS0371 106 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 53721817 Common - fumarylacetoacetate (FAA) hydrolase family protein BPSS0793 180 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 53723130 Common - LysR family transcriptional regulator BPSS2117 164 COG0583 LysR, Transcriptional regulator Transcription 53723335 Common - hypothetical protein BPSS2318 181 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 53721819 Common - hypothetical protein BPSS0795 12 COG3254 COG3254, Uncharacterized conserved protein Function unknown 53721543 Common - aminotransferase class-V BPSS0507 156 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 53722882 Common - DJ-1/PfpI family protein BPSS1863 79 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721789 Common - hypothetical protein BPSS0763 62 COG3246 COG3246, Uncharacterized conserved protein Function unknown 53723248 Common - hypothetical protein BPSS2230 38 COG1873 COG1873, Uncharacterized conserved protein Function unknown 53721336 Pathogen - hypothetical protein BPSS0301 1 None None None 53722222 Common - non-ribosomal peptide synthase BPSS1197 241 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722861 Common - hypothetical protein BPSS1842 15 None None None 53722261 Common - sugar carbohydrate kinase BPSS1238 182 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 53721986 Common - hypothetical protein BPSS0963 3 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 53721966 Common - hypothetical protein BPSS0942 32 COG4645 COG4645, Uncharacterized protein conserved in bacteria Function unknown 53723052 Common - acetyl-/propionyl-coenzyme A carboxylase alpha chain protein BPSS2034 230 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 53722116 Common - bacteriophage tail-related protein BPSS1088 28 COG3499 COG3499, Phage protein U General function prediction only 53723273 Common - glycosyltransferase family 9 protein BPSS2255 100 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 53722958 Common - ABC transport system, exported protein BPSS1937 121 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 53721063 Pathogen - hypothetical protein BPSS0024 1 None None None 53722652 Common - type III secretion protein BPSS1629 72 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 53722507 Common - hypothetical protein BPSS1485 19 COG5564 COG5564, Predicted TIM-barrel enzyme, possibly a dioxygenase General function prediction only 53722368 Common - DNA-binding protein BPSS1343 57 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 53721478 Common - hypothetical protein BPSS0440 14 COG4317 COG4317, Uncharacterized protein conserved in bacteria Function unknown 53722298 Common - hypothetical protein BPSS1276 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 53722490 Common - LysR family transcriptional regulator BPSS1469 177 COG0583 LysR, Transcriptional regulator Transcription 53723127 Common - oxidoreductase/short-chain dehydrogenase protein BPSS2114 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53723048 Common - short-chain dehydrogenase BPSS2030 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53721263 Pathogen - hypothetical protein BPSS0228 1 None None None 53721456 Common - hypothetical protein BPSS0417 74 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 53722252 Common - transcriptional regulator BPSS1229 112 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 53721765 Pathogen - hypothetical protein BPSS0738A 1 None None None 53721366 Common - dihydrodipicolinate synthase BPSS0331 234 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 53723212 Common - pilus assembly-related protein BPSS2195 65 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 53721667 Common - sensor protein BPSS0631 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53723059 Common - hypothetical protein BPSS2041 35 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 53721575 Common - hypothetical protein BPSS0539 17 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 53721174 Pathogen - hypothetical protein BPSS0138 1 None None None 53722322 Pathogen - hypothetical protein BPSS1298 1 None None None 53723084 Common - hypothetical protein BPSS2066 35 COG3970 COG3970, Fumarylacetoacetate (FAA) hydrolase family protein General function prediction only 53722551 Common bprA HNS-like regulatory protein BPSS1530 10 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53722751 Common - hypothetical protein BPSS1730 9 None None None 53723093 Common - hypothetical protein BPSS2075 45 None None None 53721306 Common - family M20D unassigned peptidase BPSS0271 166 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 53721994 Pathogen - DNA-binding protein BPSS0971 1 None None None 53722789 Common - hypothetical protein BPSS1768 5 COG4655 COG4655, Predicted membrane protein Function unknown 53722527 Common - hypothetical protein BPSS1505 89 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 53723143 Pathogen - hypothetical protein BPSS2129 1 None None None 53722039 Common - hypothetical protein BPSS1018 16 None None None 53722317 Common - lipoprotein BPSS1293 3 None None None 53722936 Common - metallo-beta-lactamase family protein BPSS1915 133 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 53721439 Pathogen - bacteriophage protein Gp44 BPSS0401 1 None None None 53722923 Common - LysR-family transcriptional regulator BPSS1902 191 COG0583 LysR, Transcriptional regulator Transcription 53722908 Common - aromatic oxygenase BPSS1887 14 COG5517 COG5517, Small subunit of phenylpropionate dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53721601 Common - AraC family regulatory protein BPSS0565 102 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721281 Common - ABC transport system, membrane protein BPSS0247 101 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 53722043 Common - RNA polymerase sigma factor BPSS1022 134 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 53723060 Common - inner membrane fatty-acid--CoA ligase BPSS2042 181 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722886 Pathogen - hypothetical protein BPSS1866A 1 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722967 Common atpA F0F1 ATP synthase subunit alpha BPSS1946 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 53722309 Pathogen - hypothetical protein BPSS1286 1 None None None 53722001 Common - hypothetical protein BPSS0978 16 COG2259 COG2259, Predicted membrane protein Function unknown 53721331 Common - GntR-family transcriptional regulator BPSS0296 134 COG1802 GntR, Transcriptional regulators Transcription 53721373 Common - insertion element protein BPSS0338 18 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722093 Common - bacteriophage head completion/stabilization protein BPSS1067 15 None None None 53721952 Common - aliphatic sulfonates binding protein precursor BPSS0928 105 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 53723079 Common - acetyltransferase (GNAT) family protein BPSS2062 40 COG0456 RimI, Acetyltransferases General function prediction only 53721430 Common - hypothetical protein BPSS0391A 2 None None None 53722181 Pathogen - hypothetical protein BPSS1153 1 None None None 53722231 Common - putative hydroxylase BPSS1206 44 COG3128 PiuC, Uncharacterized iron-regulated protein Function unknown 53721959 Common - hypothetical protein BPSS0935 5 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53722188 Common - sensor kinase protein BPSS1160 173 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 53721519 Pathogen - hypothetical protein BPSS0482 2 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 53721999 Common - gluconate dehydrogenase subunit BPSS0976 73 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 53721377 Common - sugar transport-related, membrane protein BPSS0342 174 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53721134 Common - OmpA family membrane protein BPSS0096 146 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 53721080 Common - LysR-family transcriptional regulator BPSS0041 152 COG0583 LysR, Transcriptional regulator Transcription 53721410 Common acoE acetyl-CoA synthetase BPSS0375 214 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 53722567 Common bsaN AraC-family regulator of type III secretion system BPSS1546 50 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722548 Pathogen bapB acyl carrier protein BPSS1527 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722208 Common - N-acylhomoserine lactone synthase BPSS1180 26 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 53721394 Common - hypothetical protein BPSS0359 68 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 53723239 Pathogen - hypothetical protein BPSS2222 2 None None None 53721639 Common - hypothetical protein BPSS0603 2 None None None 53721506 Common - glutamine synthetase BPSS0469 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 53721419 Common - hypothetical protein BPSS0382 49 COG5519 COG5519, Superfamily II helicase and inactivated derivatives DNA replication, recombination, and repair 161723217 Common - 3-ketoacyl-(acyl-carrier-protein) reductase BPSS0866 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722257 Common - ABC transporter permease protein BPSS1234 139 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 53721927 Common - L-aspartate dehydrogenase BPSS0903 42 COG1712 COG1712, Predicted dinucleotide-utilizing enzyme General function prediction only 53722685 Common fdhE protein FdhE BPSS1664 37 COG3058 FdhE, Uncharacterized protein involved in formate dehydrogenase formation Posttranslational modification, protein turnover, chaperones 53721221 Common - hypothetical protein BPSS0185 7 None None None 53723261 Common - lipoprotein BPSS2243 34 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 53722101 Common - bacteriophage tail completion protein R BPSS1074 17 None None None 53721255 Pathogen - hypothetical protein BPSS0220 1 None None None 53723360 Common - hypothetical protein BPSS2343 14 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 53721868 Common - transporter protein BPSS0842 55 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722541 Common - AraC-family transcriptional regulator BPSS1520 50 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721476 Common - LysR-family transcriptional regulator BPSS0438 139 COG0583 LysR, Transcriptional regulator Transcription 53722776 Common - RNA polymerase sigma factor RpoD BPSS1755 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 53721845 Common - hypothetical protein BPSS0819 6 None None None 53721958 Common - hypothetical protein BPSS0934 20 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 53721676 Common - sensor kinase protein BPSS0642 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53722879 Common - hypothetical protein BPSS1860 5 None None None 53721072 Pathogen - hypothetical protein BPSS0033 1 None None None 53721809 Common - IclR family regulatory protein BPSS0785 95 COG1414 IclR, Transcriptional regulator Transcription 53722453 Common - glycine betaine/L-proline transport ATP-binding protein BPSS1426 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 53721773 Common - outer membrane porin protein BPSS0747 23 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722211 Common - non-ribosomally encoded peptide/polyketide synthase BPSS1183 11 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 53722943 Common - hypothetical protein BPSS1922 105 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 53722999 Common - EPS transport-related membrane protein kinase BPSS1978 129 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 53721757 Common - acyl-CoA synthetase BPSS0731 200 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53723025 Pathogen - hypothetical protein BPSS2006 1 None None None 53722374 Common - dTDP-rhamnosyl transferase BPSS1349 17 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 53721170 Common - LysR-family transcriptional regulator BPSS0134 76 COG0583 LysR, Transcriptional regulator Transcription 53721089 Common - hypothetical protein BPSS0050 91 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 53722139 Common - hypothetical protein BPSS1111 46 None None None 53721653 Common - acyl-CoA dehydrogenase BPSS0617 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53721545 Common - hypothetical protein BPSS0509 126 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 53723195 Common - hypothetical protein BPSS2178 22 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 53722392 Common soxG sarcosine oxidase gamma subunit BPSS1366 22 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 53722660 Common cat2 4-hydroxybutyrate CoA transferase BPSS1637 101 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 53722160 Common - hypothetical protein BPSS1132 21 None None None 53722398 Common - hypothetical protein BPSS1372 4 None None None 53722226 Common - hypothetical protein BPSS1201 83 COG2128 COG2128, Uncharacterized conserved protein Function unknown 53722843 Common - AraC-family transcriptional regulator BPSS1824 136 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721128 Common - hypothetical protein BPSS0090 12 None None None 53722514 Common - hypothetical protein BPSS1492 30 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 53722975 Common - polymerase BPSS1954 75 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 53721842 Common - penicillin-binding protein BPSS0816 199 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 53722817 Common - hypothetical protein BPSS1798 40 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 53721388 Common - potassium channel subunit BPSS0353 192 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 53721800 Common - hypothetical protein BPSS0776 67 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 53721310 Common pcaF beta-ketoadipyl CoA thiolase BPSS0275 171 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 53721317 Common - GntR-family regulatory protein BPSS0282 213 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 53721585 Common - hypothetical protein BPSS0549 11 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 53722152 Common - hypothetical protein BPSS1124 105 COG1262 COG1262, Uncharacterized conserved protein Function unknown 53721326 Common - carboxylesterase BPSS0291 122 COG0657 Aes, Esterase/lipase Lipid metabolism 53721341 Common - multifunctional polyketide-peptide syntase BPSS0306 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723153 Common oppF oligopeptide transport ATP-binding ABC transport protein BPSS2137 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 53722649 Common - type III secretion system protein BPSS1626 5 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 53722752 Common - pigment biosynthesis-related tyrosinase protein BPSS1731 7 None None None 53721762 Common - hypothetical protein BPSS0736 8 None None None 53721384 Common - NADP-dependent glyceraldehyde-3-phosphate dehydrogenase BPSS0349 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722478 Common - hypothetical protein BPSS1457 19 None None None 53722038 Common - antibiotic resistance protein BPSS1017 146 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 53723368 Common - partitioning protein ParB BPSS2350 147 COG1475 Spo0J, Predicted transcriptional regulators Transcription 53722761 Common lipB lipase chaperone BPSS1740 16 COG5380 LimK, Lipase chaperone Posttranslational modification, protein turnover, chaperones 53721739 Common - enoyl-CoA hydratase BPSS0710 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53722010 Common - hypothetical protein BPSS0987 2 None None None 53722406 Pathogen - hypothetical protein BPSS1380 1 None None None 53721257 Common - acetyltransferase BPSS0222 14 COG0456 RimI, Acetyltransferases General function prediction only 53722791 Common polA DNA polymerase I BPSS1770 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 53721913 Common - calcineurin-like phosphoesterase BPSS0889 89 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 53722870 Common - transport-related membrane protein BPSS1851 129 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721247 Common - hypothetical protein BPSS0212 4 None None None 53721572 Common - 3-hydroxydecanoyl-ACP:CoA transacylase BPSS0536 5 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722860 Common - RNA polymerase sigma factor BPSS1841 42 COG4941 COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain Transcription 53722765 Common - cytochrome b561 BPSS1744 51 COG3038 CybB, Cytochrome B561 Energy production and conversion 53723300 Common - hypothetical protein BPSS2282 133 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 53722696 Common - hypothetical protein BPSS1676 49 COG3608 COG3608, Predicted deacylase General function prediction only 53722732 Common aceE 2-oxoacid dehydrogenase subunit E1 BPSS1711 132 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 53721875 Common - hypothetical protein BPSS0848 4 None None None 53723280 Common sdhB succinate dehydrogenase iron-sulfur subunit BPSS2262 199 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 53722175 Common - hydrogenase 4 subunit B BPSS1147 210 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 53721825 Common - TetR family regulatory protein BPSS0800 41 COG1309 AcrR, Transcriptional regulator Transcription 53722612 Common - hypothetical protein BPSS1589 4 None None None 53721186 Common - hypothetical protein BPSS0150 9 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 53721116 Common - hypothetical protein BPSS0078 48 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 53723038 Common - hypothetical protein BPSS2020 5 COG3791 COG3791, Uncharacterized conserved protein Function unknown 53722342 Common - alanyl-tRNA synthetase related protein BPSS1317 217 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 53722591 Common - N-acylhomoserine lactone synthase BPSS1570 21 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 53721640 Common - hypothetical protein BPSS0604 2 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 53721863 Common - hypothetical protein BPSS0837 42 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 53721647 Common - hypothetical protein BPSS0611 25 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 53722471 Common - acyl-coA dehydrogenase BPSS1448 169 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53721752 Common - hypothetical protein BPSS0724 2 None None None 53721240 Common prpR sigma interaction-related Fis-family transcriptional regulator BPSS0205 166 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 53722418 Common - AraC family regulator of pathogenicity genes BPSS1391 30 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721482 Common cpo non-heme chloroperoxidase BPSS0444 131 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722798 Common thrB homoserine kinase BPSS1779 60 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 53721813 Common - hydrolase N-terminus BPSS0789 63 None None None 53722835 Common - regulatory protein BPSS1816 24 COG0640 ArsR, Predicted transcriptional regulators Transcription 53722781 Common gcp O-sialoglycoprotein endopeptidase BPSS1760 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 53721096 Common - RNA polymerase sigma factor BPSS0057 152 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 53721139 Common - hypothetical protein BPSS0101 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 53723063 Common - hypothetical protein BPSS2045 102 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 53723231 Common katE hydroperoxidase II BPSS2214 126 COG0753 KatE, Catalase Inorganic ion transport and metabolism 53723326 Common - hypothetical protein BPSS2308 2 None None None 53723114 Common - hypothetical protein BPSS2100 49 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 53721130 Common - fimbria-related chaperone BPSS0092 25 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 53722008 Common - hypothetical protein BPSS0985 54 COG3791 COG3791, Uncharacterized conserved protein Function unknown 53722907 Common - aromatic hydrocarbons catabolism-related dioxygenase BPSS1886 84 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 53722380 Common betA choline dehydrogenase BPSS1355 92 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 53723070 Common - cell surface protein BPSS2053 128 None None None 53722708 Common gca GCP-mannose 4,6-dehydratase BPSS1688 218 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 53723164 Common - transposase BPSS2148a 20 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 53721697 Common - hypothetical protein BPSS0668 33 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 53722952 Common - ABC transport system, ATP-binding protein BPSS1931 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 53721975 Common - dipeptide transport system permease protein BPSS0952 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 53722759 Common - ABC transport system ATP-binding protein BPSS1738 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 53722292 Common - hypothetical protein BPSS1270 18 COG4340 COG4340, Uncharacterized protein conserved in bacteria Function unknown 53722420 Pathogen - hypothetical protein BPSS1393 1 None None None 53721732 Common - transmembrane ABC transporter protein BPSS0703 177 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 53721279 Pathogen - hypothetical protein BPSS0245 1 None None None 53721920 Common - Rieske [2Fe-2S] domain protein BPSS0896 74 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53721695 Common - alpha-ketoglutarate-dependent taurine dioxygenase BPSS0665 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53721509 Common - MerR-family transcriptional regulator BPSS0472 110 COG1396 HipB, Predicted transcriptional regulators Transcription 53722806 Common - molybdenum transport-related membrane protein BPSS1787 171 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 53722102 Common - bacteriophage tail completion protein S BPSS1075 15 None None None 53722148 Common - outer membrane efflux protein BPSS1120 114 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53721767 Pathogen - hypothetical protein BPSS0740 1 None None None 53721661 Common - drug-efflux protein BPSS0625 172 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 53723145 Common - hypothetical protein BPSS2131 6 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53722933 Common tnpA IS1001 transposase BPSS1912 70 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722570 Common - Type III secretion system protein BPSS1549 5 None None None 53722748 Common - hemagglutinin related protein BPSS1727 30 None None None 53722255 Common - transporter periplasmic binding protein BPSS1232 83 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 53722730 Pathogen - hypothetical protein BPSS1709 1 None None None 53723241 Pathogen - lipoprotein BPSS2224 1 None None None 53722921 Common - LysR-family transcriptional regulator BPSS1900 172 COG0583 LysR, Transcriptional regulator Transcription 53722509 Common - anaerobically induced outer membrane protein BPSS1487 104 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 53721558 Common - ATPase BPSS0522 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 53722644 Common - type III secretion system protein BPSS1621 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 53722445 Common - transmembrane permease transporter BPSS1418 138 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53721213 Common - hypothetical protein BPSS0177 19 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 53722183 Common - rotamase/peptidyl-prolyl cis-trans isomerase family protein BPSS1155 88 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 53722754 Common - hypothetical protein BPSS1733 2 None None None 53723045 Common - hypothetical protein BPSS2027 3 None None None 53722023 Common - hydroxymethylglutaryl-coenzyme A synthase BPSS1002 30 COG3425 PksG, 3-hydroxy-3-methylglutaryl CoA synthase Lipid metabolism 53721838 Pathogen - hypothetical protein BPSS0812A 1 None None None 53721102 Common - C4-dicarboxylate transport sensor kinase BPSS0062 202 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 53722447 Common - hypothetical protein BPSS1420 190 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53722703 Common - lipopolysaccharide biosynthesis-related membrane protein BPSS1683 35 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 53723357 Common - squalene/phytoene synthase BPSS2340 98 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 53723095 Common - DNA-binding protein BPSS2079 5 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 53722288 Common - peptide/siderophore synthetase BPSS1266 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721668 Common - patatin-like phospholipase BPSS0632 139 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 53722117 Common - bacteriophage late control gene D protein BPSS1089 37 COG3500 COG3500, Phage protein D General function prediction only 53722141 Common - family S54 unassigned peptidase BPSS1113 90 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 53722598 Common bcsA cellulose synthase catalytic subunit (UDP-forming) BPSS1577 122 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 53721730 Common - outer membrane porin protein BPSS0701 31 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722146 Common - HlyD family protein BPSS1118 172 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 53723349 Common - hypothetical protein BPSS2332 12 None None None 53721408 Common - hypothetical protein BPSS0373 55 COG2862 COG2862, Predicted membrane protein Function unknown 53723187 Common - aminotransferase BPSS2171 236 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 53722206 Common - transmembrane antiporter Na+ or K+/H+ exchanger BPSS1178 106 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 53721443 Common - glycerophosphoryl diester phosphodiesterase family protein BPSS0405 96 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 53723174 Common - IclR family transcriptional regulator BPSS2158 104 COG1414 IclR, Transcriptional regulator Transcription 53723316 Common - hypothetical protein BPSS2298 40 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53723151 Common - DedA family transmembrane protein BPSS2135 62 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 53723278 Common - hypothetical protein BPSS2260 13 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 53721466 Common - O-acetyl transferase (O-antigen-related) BPSS0427 102 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 53722583 Common - kumamolisin BPSS1562 27 COG4934 COG4934, Predicted protease Posttranslational modification, protein turnover, chaperones 53722427 Common sctU type III secretion system protein BPSS1400 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 53723190 Common cstA carbon starvation protein A BPSS2173 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 53722505 Common - TetR family transcriptional regulator BPSS1483 11 COG1309 AcrR, Transcriptional regulator Transcription 53723040 Common - outer membrane protein BPSS2022 2 None None None 53722408 Common - Endonuclease/Exonuclease/phosphatase family protein BPSS1382 76 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 53721293 Common - dehydrogenase BPSS0259 200 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53721239 Common tsr methyl-accepting chemotaxis protein I BPSS0204 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 53722788 Common - carboxymethylenebutenolidase BPSS1767 110 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 53723213 Common - type II/IV secretion system-related protein BPSS2196 167 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 53723003 Common - cation efflux related membrane protein BPSS1982 150 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 53721167 Common - dehydratase BPSS0131 146 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 53721148 Common - hypothetical protein BPSS0112 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 53721568 Common - hypothetical protein BPSS0532 46 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 53722331 Common - ATP-binding ABC transporter protein BPSS1307 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 53722576 Common - family M4 unassigned peptidase BPSS1555 44 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 53722625 Common pilT twitching motility protein BPSS1602 208 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 53722125 Common - capsule biosynthesis protein BPSS1097 61 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 53721162 Common - transport system, membrane protein BPSS0126 126 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53722338 Common - hypothetical protein BPSS1313 6 None None None 53722036 Common - LysR family transcriptional regulator BPSS1015 116 COG0583 LysR, Transcriptional regulator Transcription 53722051 Common - sugar transport system permease protein BPSS1030 110 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 53722310 Pathogen - hypothetical protein BPSS1286a 1 None None None 53721535 Common - transglutaminase-like superfamily protein BPSS0499 82 COG4196 COG4196, Uncharacterized protein conserved in bacteria Function unknown 53721641 Common - hypothetical protein BPSS0605 13 None None None 53723141 Common - IclR transcriptional regulator protein BPSS2127 97 COG1414 IclR, Transcriptional regulator Transcription 53722915 Common cyoD cytochrome O ubiquinol oxidase protein BPSS1894 54 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 53722497 Common - transmembrane sugar transporter BPSS1475 161 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53722170 Common - hydrogenase/oxidoreductase subunit BPSS1142 192 COG3260 COG3260, Ni,Fe-hydrogenase III small subunit Energy production and conversion 53721070 Common - anaerobic growth regulatory protein BPSS0031 163 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 53722376 Common - rhamnosyltransferase protein BPSS1351 34 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 53721946 Common - transporter protein BPSS0922 148 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721458 Common rfbF glucose-1-phosphate cytidylyltransferase (O-antigen-related) BPSS0419 185 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 53722824 Common - hypothetical protein BPSS1805 75 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 53722837 Common - hypothetical protein BPSS1818 39 COG4291 COG4291, Predicted membrane protein Function unknown 53721726 Common hpcG 2-oxo-hepta-3-ene-1,7-dioic acid hydratase BPSS0697 61 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 53721917 Common - porin protein BPSS0893 21 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53722655 Common - probable non-ribosomal peptide synthetase BPSS1632 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722162 Common - PadR-like family regulatory protein BPSS1134 36 COG1695 COG1695, Predicted transcriptional regulators Transcription 53721637 Common - permease protein BPSS0601 150 COG2252 COG2252, Permeases General function prediction only 53722945 Common - hypothetical protein BPSS1924 30 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 53723015 Common irlR2 metal-related two-component system, response regulator BPSS1994 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 53722095 Common - bacteriophage tail protein X BPSS1069 24 COG5004 COG5004, P2-like prophage tail protein X General function prediction only 53721836 Common - hypothetical protein BPSS0811 3 None None None 53722077 Common - hypothetical bacteriophage protein BPSS1051 5 None None None 53723257 Common - hypothetical protein BPSS2239 6 None None None 53722467 Pathogen - hypothetical protein BPSS1444 1 None None None 53722190 Common - response regulator receiver domain protein BPSS1162 96 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53721938 Pathogen - hypothetical protein BPSS0914 1 None None None 53722268 Common - uroporphyrin-III c-methyltransferase BPSS1245 198 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 53723322 Common - penicillin-binding protein BPSS2304 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 53721368 Common - oxidase BPSS0333 100 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53722246 Common - hypothetical protein BPSS1223 25 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 53722320 Common - O-methyltransferase-like protein BPSS1296 99 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 53722624 Common - type IV pilus biosynthesis protein BPSS1601 5 None None None 53721354 Pathogen - hypothetical protein BPSS0319 1 None None None 53722355 Common - hypothetical protein BPSS1330 32 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 53722671 Pathogen - hypothetical protein BPSS1650 1 None None None 53722012 Pathogen - hypothetical protein BPSS0989 1 None None None 53722728 Common leuC isopropylmalate isomerase large subunit BPSS1707 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 53721904 Common - transcription elongation factor BPSS0880 119 COG0782 GreA, Transcription elongation factor Transcription 53723102 Common - hypothetical protein BPSS2086 4 None None None 53722637 Pathogen - type III secretion protein BPSS1614 4 None None None 53722413 Pathogen - ATP/GTP binding protein BPSS1386 2 None None None 53721797 Common - GerE family regulatory protein BPSS0770 160 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53721850 Common - dioxygenase BPSS0824 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53721204 Common - hypothetical protein BPSS0168 151 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 53722083 Common - bacteriophage gp29 protein BPSS1057 16 COG4104 COG4104, Uncharacterized conserved protein Function unknown 53722534 Pathogen - hypothetical protein BPSS1512 1 COG5560 UBP12, Ubiquitin C-terminal hydrolase Posttranslational modification, protein turnover, chaperones 53721715 Pathogen - hypothetical protein BPSS0686a 1 None None None 53723287 Common - transcriptional regulator BPSS2269 2 None None None 53723225 Common - hypothetical protein BPSS2208 4 None None None 53721621 Common pchR AraC family regulatory protein BPSS0585 103 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722070 Pathogen - hypothetical bacteriophage protein BPSS1048 1 None None None 53721140 Common - hypothetical protein BPSS0102 132 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 53722166 Common - hypothetical protein BPSS1138 16 COG2191 COG2191, Formylmethanofuran dehydrogenase subunit E Energy production and conversion 53722064 Common czcC cobalt-zinc-cadmium resistance protein BPSS1043 77 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53721884 Common - hypothetical protein BPSS0857 8 None None None 53722350 Common lrp AsnC family leucine-responsive regulatory protein BPSS1325 143 COG1522 Lrp, Transcriptional regulators Transcription 53723217 Common tyrB2 aromatic amino acid aminotransferase BPSS2200 76 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 53722603 Common bcsZ endo-1,4-D-glucanase BPSS1581 33 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 53722898 Common - hypothetical protein BPSS1877 8 COG2030 MaoC, Acyl dehydratase Lipid metabolism 53722218 Common - non-ribosomal peptide/polyketide synthase BPSS1193 184 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722177 Pathogen - hypothetical protein BPSS1149 1 None None None 53723109 Common - hypothetical protein BPSS2095 30 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 53721963 Common - carboxymuconolactone decarboxylase BPSS0939 87 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 53721079 Common folE GTP cyclohydrolase I BPSS0040 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 53722884 Common trpS tryptophanyl-tRNA synthetase II BPSS1865 239 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 53722157 Common - hypothetical protein BPSS1129 3 COG5472 COG5472, Predicted small integral membrane protein Function unknown 53722891 Common - chemotaxis-related histidine kinase protein BPSS1871 217 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 53722113 Common - bacteriophage protein BPSS1086 16 None None None 53722665 Common - hypothetical protein BPSS1644 145 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722302 Common - threonine dehydratase BPSS1279 205 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 53722537 Pathogen - hypothetical protein BPSS1516 1 None None None 53722981 Common deoA thymidine phosphorylase BPSS1960 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 53721678 Common - DNA-binding protein BPSS0644 37 COG1737 RpiR, Transcriptional regulators Transcription 53722214 Common - hypothetical protein BPSS1187 4 None None None 53722399 Common - hypothetical protein BPSS1373 41 COG3132 COG3132, Uncharacterized protein conserved in bacteria Function unknown 53723005 Common - hypothetical protein BPSS1984 3 None None None 53722379 Common betB betaine aldehyde dehydrogenase BPSS1354 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722473 Common - copper nitrite reductase protein BPSS1452 92 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 53723027 Common glmS3 glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 3 BPSS2009 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 53721954 Common - phosphinothricin N-acetyltransferase BPSS0930 116 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 53721259 Common - cation-transporting ATPase membrane protein BPSS0224 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 53721075 Pathogen - hypothetical protein BPSS0036 2 None None None 53721190 Common dadA D-amino acid dehydrogenase small subunit BPSS0154 110 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53721834 Common - hypothetical protein BPSS0809 19 COG3189 COG3189, Uncharacterized conserved protein Function unknown 53721899 Common - LysE type translocator BPSS0875 98 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 53722019 Common - polyketide beta-ketoacyl:acyl carrier protein synthase BPSS0998 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53723078 Common - hypothetical protein BPSS2061 49 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 53722698 Common - ribonuclease BPSS1678 103 COG1295 Rbn, Predicted membrane protein Function unknown 53722430 Common sctQ type III secretion-associated protein BPSS1403 11 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 53721498 Common - oxidoreductase BPSS0461 126 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53721273 Common - hypothetical protein BPSS0239 132 COG2860 COG2860, Predicted membrane protein Function unknown 53721386 Common - copper-related MerR-family transcriptional regulator BPSS0351 148 COG0789 SoxR, Predicted transcriptional regulators Transcription 53722973 Common - ATP synthase epsilon chain BPSS1952 16 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 53721227 Common - hypothetical protein BPSS0192 8 None None None 53723133 Common - metallo-beta-lactamase family protein BPSS2119 162 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 53722815 Common - hypothetical protein BPSS1796 47 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 53722403 Common - ubiquinol cytochrome c cyanide insensitive terminal oxidase BPSS1377 164 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 53721827 Common - outative extracellular ligand binding protein BPSS0802 142 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 53721848 Common - hypothetical protein BPSS0822 4 None None None 53722970 Common - ATP synthase A chain BPSS1949 185 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 53721315 Common gabD succinate-semialdehyde dehydrogenase (NADP+) BPSS0280 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722394 Common soxD sarcosine oxidase delta subunit BPSS1368 37 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 53723197 Common - hypothetical protein BPSS2180 3 COG2246 COG2246, Predicted membrane protein Function unknown 53721382 Common - ABC transport system, membrane protein BPSS0347 14 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 53722137 Common - methyltransferase BPSS1109 71 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 53722224 Pathogen - hypothetical protein BPSS1199 1 None None None 53721655 Common mmsA methylmalonate-semialdehyde dehydrogenase BPSS0619 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53721314 Common - rieske iron-sulfur protein BPSS0279 66 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 53722028 Common - polyketide synthase BPSS1007 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53721057 Common adc acetoacetate decarboxylase BPSS0018 21 COG4689 Adc, Acetoacetate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 53723252 Common - transport related, membrane protein BPSS2234 90 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 53722439 Common - hypothetical protein BPSS1412 36 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 53722690 Common - hypothetical protein BPSS1670 62 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 53722493 Common - TetR family transcriptional regulator BPSS1471 99 COG1309 AcrR, Transcriptional regulator Transcription 53721603 Common - hypothetical protein BPSS0567 61 COG3246 COG3246, Uncharacterized conserved protein Function unknown 53722910 Common - AraC-family transcriptional regulator BPSS1889 27 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721517 Pathogen - hypothetical protein BPSS0480 1 None None None 53721432 Common - hypothetical protein BPSS0395 12 COG2929 COG2929, Uncharacterized protein conserved in bacteria Function unknown 53721623 Common pchF pyochelin synthetase BPSS0587 207 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53723237 Common - hypothetical protein BPSS2220 46 COG3546 COG3546, Mn-containing catalase Inorganic ion transport and metabolism 53722960 Common - ABC transport system, membrane protein BPSS1939 125 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 53722569 Common - Type III secretion system protein BPSS1548 7 None None None 53722199 Common - non-ribosomal peptide synthase/polyketide synthase BPSS1171 181 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 53722363 Common - hypothetical protein BPSS1338 69 COG2391 COG2391, Predicted transporter component General function prediction only 53722904 Common - hypothetical protein BPSS1883 133 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 53721100 Common - H-NS-like DNA-binding protein BPSS0060B 15 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53722833 Common - hypothetical protein BPSS1814 3 None None None 53721267 Common - squalene/phytoene synthase BPSS0232 74 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 53721663 Common - ribonuclease BPSS0627 35 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 53721286 Common - porin membrane protein BPSS0252 15 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721151 Pathogen - hypothetical protein BPSS0115 1 None None None 53721412 Common - transport related membrane protein BPSS0377 164 COG4147 DhlC, Predicted symporter General function prediction only 53721923 Common - hydrolase BPSS0899 34 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722259 Common - sugar transporter ATP-binding protein BPSS1236 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 53721943 Common - hypothetical protein BPSS0919 69 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 53722683 Common selB selenocysteine-specific elongation factor BPSS1662 249 COG3276 SelB, Selenocysteine-specific translation elongation factor Translation, ribosomal structure and biogenesis 53721633 Pathogen - hypothetical protein BPSS0597 1 None None None 53722558 Common spaP surface presentation of antigens protein SpaP BPSS1537 128 COG4790 EscR, Type III secretory pathway, component EscR Intracellular trafficking and secretion 53722451 Common - AraC transcriptional regulatory protein BPSS1424 144 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 53721504 Common potF putrescine ABC transport system, binding exported protein BPSS0467 134 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 53721619 Common pchC pyochelin biosynthetic protein BPSS0583 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 53723036 Common - hypothetical protein BPSS2018 115 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 53722853 Common - lipopolysaccharide biosynthesis related protein BPSS1834 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 53722663 Common - LysR-family transcriptional regulator BPSS1640 181 COG0583 LysR, Transcriptional regulator Transcription 53721396 Common - hypothetical protein BPSS0361 39 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 53721902 Common - ArsR family regulatory protein BPSS0878 36 COG0640 ArsR, Predicted transcriptional regulators Transcription 53721114 Common - ABC transport system, exported substrate-binding protein BPSS0077 125 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 53723185 Common - MoaA/NifB/PqqE family protein BPSS2169 102 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 53721474 Common - AraC-family regulatory protein BPSS0436 120 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53721484 Common - hypothetical protein BPSS0447 48 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 53721094 Common - hypothetical protein BPSS0055 28 COG3652 COG3652, Predicted outer membrane protein Function unknown 53721781 Common - LysR family regulatory protein BPSS0755 178 COG0583 LysR, Transcriptional regulator Transcription 53723276 Common - hypothetical protein BPSS2258 4 None None None 53721815 Common - hypothetical protein BPSS0791 48 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 53721109 Common - transposase BPSS0070 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 53723343 Common - flavin-binding monooxygenase-like protein BPSS2326 77 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 53722340 Common ileS isoleucyl-tRNA synthetase BPSS1315 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 53721750 Common - enoyl-(acyl carrier protein) reductase BPSS0721 203 COG0623 FabI, Enoyl- acyl-carrier-protein 53722722 Pathogen - hypothetical protein BPSS1702 1 None None None 53721329 Common - multidrug efflux system lipoprotein BPSS0294 129 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 53723022 Pathogen - hypothetical protein BPSS2001 1 None None None 53722347 Common - AraC family transcriptional regulatory protein BPSS1322 48 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53722877 Common - LysR-family transcriptional regulator BPSS1858 138 COG0583 LysR, Transcriptional regulator Transcription 161723220 Common livM leucine/isoleucine/valine transporter permease subunit BPSS0577 154 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 53722283 Common - hypothetical protein BPSS1261 15 COG4390 COG4390, Uncharacterized protein conserved in bacteria Function unknown 53721446 Common - hypothetical protein BPSS0408 2 None None None 53722294 Common - acyl-CoA dehydrogenase BPSS1272 128 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53723228 Common - ATP-dependent DNA ligase BPSS2211 74 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 53722563 Common bsaR surface presentation of antigens protein BPSS1542 5 None None None 53721507 Common - glutamine amidotransferase BPSS0470 98 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 53723166 Common - citrate lyase BPSS2150 108 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 53721328 Common - multidrug-efflux transporter protein BPSS0293 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 53723366 Common - arsenate reductase BPSS2348 112 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 53721822 Common - IclR family regulatory protein BPSS0797 104 COG1414 IclR, Transcriptional regulator Transcription 53721769 Common - beta alanine--pyruvate transaminase BPSS0742 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 53722573 Pathogen - Type III secretion system protein BPSS1552 1 None None None 53722739 Common sdhA succinate dehydrogenase flavoprotein subunit BPSS1718 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 53722867 Common - hypothetical protein BPSS1848 153 COG0628 PerM, Predicted permease General function prediction only 53721188 Pathogen - hypothetical protein BPSS0152 1 COG4907 COG4907, Predicted membrane protein Function unknown 53721718 Common - hypothetical protein BPSS0689 18 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 53721206 Common - lipoprotein BPSS0170 25 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 53722104 Common - site-specific DNA methyltransferase BPSS1077 72 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 53721743 Common - hypothetical protein BPSS0714 65 COG4301 COG4301, Uncharacterized conserved protein Function unknown 53721693 Pathogen - hypothetical protein BPSS0663 1 None None None 53722804 Common - hypothetical protein BPSS1785 8 None None None 53722154 Common - O-methyltransferase BPSS1126 36 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 53721512 Pathogen - hypothetical protein BPSS0475 1 None None None 53722386 Common - stress-induced protein BPSS1361 40 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 53722847 Common - glycosyltransferase group 1 protein BPSS1828 3 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 53722456 Common - hypothetical protein BPSS1429 8 None None None 53721932 Common - surface-exposed protein BPSS0908 46 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 53722802 Pathogen - hypothetical protein BPSS1783 1 None None None 53721737 Common - porin protein BPSS0708 23 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721343 Common - hypothetical protein BPSS0308 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 53722186 Common narH respiratory nitrate reductase subunit BPSS1158 147 COG1140 NarY, Nitrate reductase beta subunit Energy production and conversion 53722465 Pathogen - hypothetical protein BPSS1442 1 None None None 53722763 Common - outer membrane copper receptor BPSS1742 98 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 53721333 Common - transport related membrane protein BPSS0298 48 COG0679 COG0679, Predicted permeases General function prediction only 53721840 Common - chemotaxis protein BPSS0814 215 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 53722713 Common - bacteriocin production related protein BPSS1693 22 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 53721707 Common - oxidoreductase beta subunit BPSS0679 109 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 53721307 Common - transporter protein BPSS0272 132 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721775 Common - GerE familyregulatory protein BPSS0749 62 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 53721249 Common - heme/metallo cofactor biosynthesis related protein BPSS0214 152 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 53722003 Common - hypothetical protein BPSS0980 10 None None None 53722822 Common - AraC-family transcriptional regulator BPSS1803 76 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53723244 Pathogen - hypothetical protein BPSS2227 1 None None None 53721877 Common - hypothetical protein BPSS0850 5 None None None 53722653 Pathogen - hypothetical protein BPSS1630 2 None None None 53722546 Pathogen bopE G-nucleotide exchange factor BPSS1525 3 None None None 53721215 Common - hypothetical protein BPSS0179 42 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 53721527 Common ahpF alkyl hydroperoxide reductase subunit BPSS0491 247 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 53723050 Common - acyl-CoA dehydrogenase BPSS2032 162 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53721645 Common - thiamine pyrophosphate enzyme family protein BPSS0609 44 COG4032 COG4032, Predicted thiamine-pyrophosphate-binding protein General function prediction only 53722062 Common czcA cation efflux system protein BPSS1041 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 53721379 Common - hypothetical protein BPSS0344 103 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 53722928 Common - hypothetical protein BPSS1907 80 COG0657 Aes, Esterase/lipase Lipid metabolism 53721522 Common - metallo-beta lactamase-related protein BPSS0485 9 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 53721881 Pathogen - hypothetical protein BPSS0854 1 None None None 53722875 Common - phosphotransferase BPSS1856 60 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 53722774 Common - hypothetical protein BPSS1753 5 None None None 53722459 Common - arsenate reductase BPSS1432 123 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 53721065 Pathogen - hypothetical protein BPSS0026 1 None None None 53722487 Common - aldehyde dehydrogenase family protein BPSS1466 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722926 Common benC benzoate 1,2-dioxygenase ferredoxin reductase subunit BPSS1905 169 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 53721852 Common - aminotransferase class-V BPSS0826 194 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 53721448 Common - hypothetical protein BPSS0410 3 None None None 53722845 Common - glycosyltransferase BPSS1826 47 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 53721164 Common pyk pyruvate kinase BPSS0128 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 53721570 Pathogen - hypothetical protein BPSS0534 1 None None None 53721169 Common - methyltransferase BPSS0133 50 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 53721160 Common - response regulator BPSS0124 167 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53723285 Common - hypothetical protein BPSS2267 79 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721441 Common - hypothetical protein BPSS0403 6 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 53721755 Common - hypothetical protein BPSS0727 28 COG3467 COG3467, Predicted flavin-nucleotide-binding protein General function prediction only 53723123 Common - FHA-family protein BPSS2109 18 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 53722900 Common - acetolactate synthase BPSS1879 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 53722634 Pathogen - hypothetical protein BPSS1611 4 None None None 53722992 Common - two component system fusin protein BPSS1971 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 53723192 Common - hydrolase BPSS2175 87 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 53722429 Pathogen - hypothetical protein BPSS1402 3 None None None 53722336 Pathogen - hypothetical protein BPSS1311A 1 None None None 53721591 Common - ferredoxin oxidoreductase protein BPSS0555 175 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 53722193 Common - alpha-ketoglutarate-dependent taurine dioxygenase BPSS1165 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 53723134 Common - sugar transport/efflux pump BPSS2120 191 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722092 Common - bacteriophage terminase, endonuclease subunit BPSS1066 22 None None None 53721422 Pathogen - hypothetical protein BPSS0384A 1 None None None 53723128 Common - LysR family transcriptional regulator BPSS2115 162 COG0583 LysR, Transcriptional regulator Transcription 53721299 Common - porin-related protein BPSS0265 27 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721195 Common - hypothetical protein BPSS0159 26 COG3537 COG3537, Putative alpha-1,2-mannosidase Carbohydrate transport and metabolism 53721611 Common braC leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BPSS0575 150 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 53723056 Common - polyketide synthase subunit BPSS2038 23 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53722041 Common - AraC family transcriptional regulator BPSS1020 109 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 53721424 Common tnpR transposon Tn2501 resolvase BPSS0386 135 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 53722522 Common - hypothetical protein BPSS1500 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 53722370 Common - hypothetical protein BPSS1345 42 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 53721859 Common - hypothetical protein BPSS0833 2 None None None 53723215 Common - hypothetical protein BPSS2198 85 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 53722159 Common - LuxR family transcriptional regulator BPSS1131 19 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 53722352 Common - MFS family sugar transporter protein BPSS1327 101 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 53723307 Common - porin protein BPSS2289 20 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53723291 Common bkdA1 2-oxoisovalerate dehydrogenase alpha subunit BPSS2273 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 53721681 Common - hypothetical protein BPSS0647 39 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 53721786 Common - DNA-binding protein BPSS0760 36 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 53721067 Common - hypothetical protein BPSS0028 2 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 53721361 Common - transport-related membrane protein BPSS0326 147 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721533 Common - hypothetical protein BPSS0497 82 COG2307 COG2307, Uncharacterized protein conserved in bacteria Function unknown 53721683 Pathogen - hypothetical protein BPSS0649 1 None None None 53721051 Common - LysR-family regulatory protein BPSS0012 180 COG0583 LysR, Transcriptional regulator Transcription 53723331 Common - sensor kinase protein BPSS2314 152 COG4564 COG4564, Signal transduction histidine kinase Signal transduction mechanisms 53722750 Common - cytochrome C BPSS1729 74 COG3258 COG3258, Cytochrome c Energy production and conversion 53721251 Common - hypothetical protein BPSS0216 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53721301 Common - hypothetical protein BPSS0267 23 COG3608 COG3608, Predicted deacylase General function prediction only 53722718 Common - modification methylase BPSS1698 133 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 53722642 Pathogen - type III secretion protein BPSS1619 2 None None None 53722940 Pathogen - hypothetical protein BPSS1919 1 None None None 53721104 Pathogen - hypothetical protein BPSS0064 1 None None None 53723266 Common - transferase BPSS2248 10 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 53723080 Common - hypothetical protein BPSS2063 52 None None None 53722069 Pathogen - hypothetical bacteriophage protein BPSS1047a 1 None None None 53722123 Common - heat-shock chaperone protein BPSS1095 19 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 53723061 Common - hypothetical protein BPSS2043 59 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 53722711 Common metZ O-succinylhomoserine sulfhydrylase BPSS1691 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 53722954 Pathogen - hypothetical protein BPSS1933 1 None None None 53721892 Common feaB phenylacetaldehyde dehydrogenase BPSS0868 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 53722021 Common - polyketide biosynthesis enoyl-CoA hydratase BPSS1000 176 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 53722889 Common - dehalogenase BPSS1869 34 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 53722705 Common - lipopolysaccharide biosynthesis related membrane protein BPSS1685 33 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 53721401 Common - biopolymer transport protein BPSS0366 132 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 53722865 Pathogen - hypothetical protein BPSS1846 1 COG4575 ElaB, Uncharacterized conserved protein Function unknown 53722281 Common - iron-containing alcohol dehydrogenase BPSS1259 169 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 53722119 Common - hypothetical protein BPSS1091 6 COG2916 Hns, DNA-binding protein H-NS General function prediction only 53722555 Common bsaZ surface presentation of antigens protein SpaS BPSS1534 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 53723208 Common - lipoprotein BPSS2191 5 None None None 53721721 Common - fumarylacetoacetate (FAA) hydrolase family protein BPSS0692 146 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 53721464 Common - heptosyltransferase (O-antigen related) BPSS0425 90 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 53722085 Pathogen - bacteriophage gp31 protein BPSS1059 5 None None None 53722415 Pathogen - hypothetical protein BPSS1388 2 None None None 53722618 Common pilS major pilin subunit BPSS1595 4 None None None 53723271 Common - glycosyltransferase BPSS2253 114 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 53722365 Common - transmembrane cytochrome b561 BPSS1340 91 COG3038 CybB, Cytochrome B561 Energy production and conversion 53723097 Common - alpha-galactosidase BPSS2081 44 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 53721232 Common - hypothetical protein BPSS0197 167 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 53722275 Common - inner membrane transport protein BPSS1252 124 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53722741 Common - succinate dehydrogenase cytochrome b-556 subunit BPSS1720 59 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 53723043 Common - decarboxylase BPSS2025 77 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 53723219 Common - porin related, membrane protein BPSS2202 26 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721136 Common - hypothetical protein BPSS0098 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 53722677 Common - hypothetical protein BPSS1656 60 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 53723169 Common - isochorismatase family protein BPSS2153 124 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 53723318 Common - iron-sulfur cluster protein BPSS2300 163 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 53722601 Common - hypothetical protein BPSS1579 16 None None None 53722072 Pathogen - hypothetical bacteriophage protein BPSS1048b 1 None None None 53721237 Common - hypothetical protein BPSS0202 22 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 53722635 Pathogen - hypothetical protein BPSS1612 1 None None None 53721886 Common - LysR family regulatory protein BPSS0861 109 COG0583 LysR, Transcriptional regulator Transcription 53721202 Common - LysR family regulatory protein BPSS0166 165 COG0583 LysR, Transcriptional regulator Transcription 53722304 Common - hypothetical protein BPSS1281 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 53721451 Common - hypothetical protein BPSS0413 2 None None None 53722266 Common nirB nitrite reductase (NAD(P)H) BPSS1243 208 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 53722312 Common - gamma-glutamyltransferase 1 BPSS1288 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 53721285 Common - Lysine decarboxylase family protein BPSS0251 30 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 53722115 Common - bacteriophage membrane protein BPSS1087 35 COG5283 COG5283, Phage-related tail protein Function unknown 53721045 Common tdh L-threonine 3-dehydrogenase BPSS0006 209 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 53722896 Common - sensor kinase/response regulator fusion protein BPSS1876 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53721525 Common - hypothetical protein BPSS0488 32 COG3686 COG3686, Predicted membrane protein Function unknown 53721126 Common - hypothetical protein BPSS0088 57 None None None 53722327 Common - aminopeptidase DmpA BPSS1303 37 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 53721961 Common - hypothetical protein BPSS0937 143 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 53721153 Common - histidine kinase/response regulator fusion protein BPSS0117 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 53721921 Common - short chain dehydrogenase BPSS0897 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 53722539 Common - transposase BPSS1518 5 None None None 53723148 Common - sigma-54 dependent transcriptional regulator BPSS2132 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 53721960 Common - hypothetical protein BPSS0936 92 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 53723072 Common - hypothetical protein BPSS2055 4 None None None 53721724 Common hpcB 3,4-dihydroxyphenylacetate 2,3-dioxygenase BPSS0695 24 COG3384 COG3384, Uncharacterized conserved protein Function unknown 53721632 Common - sigma-54 activated regulatory protein BPSS0596 177 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 53722913 Common catA catechol 1,2-dioxygenase BPSS1892 48 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 53721984 Pathogen - hypothetical protein BPSS0961 1 None None None 53721556 Common - hypothetical protein BPSS0520 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 53721058 Common - transport-related membrane protein BPSS0019 22 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 53721352 Common - monooxygenase BPSS0317 72 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 53721290 Common rbsC ABC ribose transport system, permease protein BPSS0256 111 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 53722495 Common - hypothetical protein BPSS1473 10 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 53722079 Common - hypothetical bacteriophage-acquired protein BPSS1053 2 None None None 53721110 Common - regulatory protein BPSS0073 65 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 53723298 Common - DksA/TraR C4-type zinc finger protein BPSS2280 63 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 53722947 Common - denylylsulfate kinase BPSS1926 143 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 53721598 Common - porin protein BPSS0562 27 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 53721795 Common - hypothetical protein BPSS0769 47 COG0657 Aes, Esterase/lipase Lipid metabolism 53723154 Common oppD oligopeptide transport ATP-binding ABC transport protein BPSS2138 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 53722088 Common - hypothetical protein BPSS1062 24 COG5518 COG5518, Bacteriophage capsid portal protein General function prediction only 53722622 Common pilO type IV pilus biosynthesis protein BPSS1599 5 None None None 53721175 Common - mercuric reductase BPSS0139 241 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 53721936 Common - AsnC family regulatory protein BPSS0912 162 COG1522 Lrp, Transcriptional regulators Transcription 53723017 Pathogen - hypothetical protein BPSS1996 1 None None None 53721583 Common glyA serine hydroxymethyltransferase BPSS0547 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 53722204 Common - N-acyl-homoserine lactone dependent regulatory protein BPSS1176 97 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 53721462 Common - hypothetical protein BPSS0423 4 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 53722357 Common - cytochrome-c methylamine utilization protein BPSS1332 79 COG1858 MauG, Cytochrome c peroxidase Inorganic ion transport and metabolism 53723250 Pathogen - hypothetical protein BPSS2232 1 None None None 53722984 Common - nucleoside transport related membrane protein BPSS1963 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 53722990 Common - monooxygenase BPSS1969 65 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 53722058 Common - sugar transport protein BPSS1037 166 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism