Bacteroides fragilis YCH46 plasmid pBFY46, complete sequence NC_006297 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 52421244 Common - hypothetical protein BFp0030 2 COG3428 COG3428, Predicted membrane protein Function unknown 52421230 Common - conserved hypothetical protein found in conjugate transposon TraM BFp0016 3 None None None 52421242 Pathogen - hypothetical protein BFp0028 2 None None None 52421236 Pathogen - hypothetical protein BFp0022 1 None None None 52421219 Common - conserved hypothetical protein found in conjugate transposon TraA BFp0005 40 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 52421224 Common - conserved hypothetical protein BctA BFp0010 25 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 52421243 Pathogen - hypothetical protein BFp0029 1 None None None 52421254 Common - DNA primase TraC BFp0040 46 COG4227 COG4227, Antirestriction protein DNA replication, recombination, and repair 52421245 Pathogen - hypothetical protein BFp0031 1 None None None 52421253 Pathogen - hypothetical protein BFp0039 1 None None None 52421223 Pathogen - hypothetical protein BFp0009 1 None None None 52421237 Pathogen - hypothetical protein BFp0023 1 None None None 52421218 Common - putative mobilization protein BFp0004 9 None None None 52421249 Pathogen - hypothetical protein BFp0035 1 None None None 52421240 Common - putative cell wall endopeptidase family protein BFp0026 185 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 52421261 Common - putative replication protein BFp0047 10 COG5527 COG5527, Protein involved in initiation of plasmid replication DNA replication, recombination, and repair 52421215 Pathogen - hypothetical protein BFp0001 1 None None None 52421233 Pathogen - hypothetical protein BFp0019 1 None None None 52421217 Common - transposase BFp0003 44 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 52421251 Pathogen - putative phage related transcriptional regulator BFp0037 1 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 52421241 Common - hypothetical protein BFp0027 3 None None None 52421231 Common - conserved hypothetical protein found in conjugate transposon TraN BFp0017 5 None None None 52421260 Pathogen - hypothetical protein BFp0046 1 None None None 52421234 Common - putative outer membrane protein BFp0020 166 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 52421252 Pathogen - hypothetical protein BFp0038 1 None None None 52421235 Pathogen - hypothetical protein BFp0021 1 None None None 52421216 Common - hypothetical protein BFp0002 2 None None None 52421225 Pathogen - hypothetical protein BFp0011 1 None None None 52421220 Pathogen - hypothetical protein BFp0006 1 None None None 52421227 Common - conserved hypothetical protein found in conjugate transposon TraJ BFp0013 4 None None None 52421229 Pathogen - hypothetical protein BFp0015 1 None None None 52421258 Pathogen - hypothetical protein BFp0044 1 None None None 52421248 Common - DNA binding protein HU BFp0034 172 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 52421228 Common - conserved hypothetical protein found in conjugate transposon TraK BFp0014 5 None None None 52421226 Pathogen - hypothetical protein BFp0012 1 None None None 52421232 Pathogen - hypothetical protein BFp0018 1 None None None 52421250 Common - putative mobilization protein BFp0036 12 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 52421259 Pathogen - hypothetical protein BFp0045 1 None None None 52421238 Common - hypothetical protein BFp0024 6 None None None 52421255 Pathogen - hypothetical protein BFp0041 1 None None None 52421222 Common - conserved hypothetical protein found in conjugate transposon TraE BFp0008 3 None None None 52421246 Common - putative DNA topoisomerase I BFp0032 26 None None None 52421256 Pathogen - hypothetical protein BFp0042 1 None None None 52421239 Common - hypothetical protein BFp0025 8 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 52421221 Pathogen - hypothetical protein BFp0007 1 None None None 52421247 Pathogen - hypothetical protein BFp0033 1 None None None 52421257 Pathogen - hypothetical protein BFp0043 1 None None None