Synechocystis sp. PCC 6803 plasmid pSYSM, complete sequence NC_005229 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 38505665 Common - hypothetical protein sll5130 4 None None None 38505604 Nonpathogen - hypothetical protein sll5069 2 None None None 38505654 Common - hypothetical protein slr5119 10 COG5464 COG5464, Uncharacterized conserved protein Function unknown 38505577 Common - hypothetical protein sll5042 21 None None None 38505648 Common - hypothetical protein ssl5113 2 None None None 38505622 Common - hypothetical protein slr5087 6 COG5502 COG5502, Uncharacterized conserved protein Function unknown 38505617 Common - hypothetical protein slr5082 9 COG5464 COG5464, Uncharacterized conserved protein Function unknown 38505556 Common - hypothetical protein slr5021 80 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 38505589 Common - hypothetical protein slr5054 20 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 38505537 Nonpathogen - hypothetical protein sll5002 1 None None None 38505579 Nonpathogen - hypothetical protein sll5044 5 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 38505602 Common - hypothetical protein sll5067 14 COG0645 COG0645, Predicted kinase General function prediction only 38505631 Nonpathogen - hypothetical protein ssl5096 1 None None None 38505601 Common - hypothetical protein sll5066 67 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 38505611 Common - hypothetical protein sll5076 70 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 38505561 Common - hypothetical protein sll5026 11 None None None 38505621 Common - GntR family transcriptional regulatory protein sll5086 228 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 38505667 Common - hypothetical protein sll5132 42 COG1479 COG1479, Uncharacterized conserved protein Function unknown 38505558 Common - hypothetical protein slr5023 46 COG4637 COG4637, Predicted ATPase General function prediction only 38505594 Common - two-component response regulator sll5059 225 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 38505592 Common - hypothetical protein sll5057 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 38505652 Nonpathogen - hypothetical protein ssr5117 5 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 38505545 Common - hypothetical protein slr5010 119 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 38505642 Common - cytidine deaminase sll5107 121 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 38505563 Nonpathogen - hypothetical protein sll5028 2 None None None 38505650 Common - hypothetical protein slr5115 107 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 38505570 Common - ArsR family transcriptional regulatory protein sll5035 105 COG0640 ArsR, Predicted transcriptional regulators Transcription 38505581 Common - hypothetical protein sll5046 34 None None None 38505633 Nonpathogen - hypothetical protein ssl5098 1 None None None 38505538 Common - hypothetical protein sll5003 5 COG4634 COG4634, Uncharacterized protein conserved in bacteria Function unknown 38505599 Common - hypothetical protein ssl5064 5 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 38505630 Common - hypothetical protein ssl5095 16 None None None 38505590 Common - hypothetical protein slr5055 111 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 38505649 Nonpathogen - hypothetical protein ssl5114 1 None None None 38505651 Common - hypothetical protein slr5116 14 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 38505644 Nonpathogen - hypothetical protein sll5109 2 None None None 38505608 Nonpathogen - hypothetical protein slr5073 2 None None None 38505658 Common - hypothetical protein sll5123 139 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 38505542 Nonpathogen - hypothetical protein ssl5007 1 None None None 38505582 Nonpathogen - hypothetical protein sll5047 9 None None None 38505635 Nonpathogen - hypothetical protein ssl5100 1 None None None 38505559 Common - hypothetical protein slr5024 13 None None None 38505550 Nonpathogen - hypothetical protein ssl5015 1 None None None 38505569 Common - hypothetical protein sll5034 17 None None None 38505560 Common - hypothetical protein ssl5025 25 COG2442 COG2442, Uncharacterized conserved protein Function unknown 38505572 Common - hypothetical protein slr5037 38 COG3439 COG3439, Uncharacterized conserved protein Function unknown 38505549 Nonpathogen - hypothetical protein sll5014 1 None None None 38505613 Common - hypothetical protein slr5078 23 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 38505606 Nonpathogen - hypothetical protein slr5071 1 None None None 38505597 Nonpathogen - hypothetical protein sll5062 3 None None None 38505656 Nonpathogen - hypothetical protein ssr5121 1 None None None 38505565 Common - hypothetical protein sll5030 40 COG1578 COG1578, Uncharacterized conserved protein Function unknown 38505660 Nonpathogen - hypothetical protein ssl5125 1 None None None 38505616 Common - hypothetical protein sll5081 8 COG3878 COG3878, Uncharacterized protein conserved in bacteria Function unknown 38505662 Nonpathogen - hypothetical protein slr5127 1 None None None 38505552 Common - hypothetical protein slr5017 21 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 38505637 Common - hypothetical protein slr5102 23 COG2253 COG2253, Uncharacterized conserved protein Function unknown 38505627 Nonpathogen - hypothetical protein ssr5092 1 None None None 38505605 Nonpathogen - hypothetical protein ssl5070 1 None None None 38505540 Common - hypothetical protein slr5005 76 None None None 38505554 Common - hypothetical protein ssr5019 73 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 38505628 Common - hypothetical protein slr5093 33 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 38505547 Common - hypothetical protein slr5012 10 None None None 38505584 Common - hypothetical protein sll5049 83 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 38505624 Nonpathogen - hypothetical protein sll5089 3 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 38505567 Common - hypothetical protein sll5032 8 None None None 38505587 Common - hypothetical protein sll5052 84 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 38505564 Common - transposase slr5029 33 COG5659 COG5659, FOG: Transposase DNA replication, recombination, and repair 38505623 Common - hypothetical protein slr5088 188 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 38505536 Common - hypothetical protein ssl5001 6 None None None 38505585 Common - hypothetical protein sll5050 164 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 38505586 Common - hypothetical protein slr5051 4 None None None 38505574 Nonpathogen - hypothetical protein ssl5039 1 None None None 38505618 Common - hypothetical protein sll5083 7 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 38505632 Common - hypothetical protein sll5097 98 COG2378 COG2378, Predicted transcriptional regulator Transcription 38505557 Common - hypothetical protein slr5022 236 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 38505639 Common - arsenate reductase sll5104 96 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 38505603 Nonpathogen - hypothetical protein ssl5068 1 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 38505664 Nonpathogen - hypothetical protein ssl5129 4 None None None 38505640 Common - plasmid partitioning protein slr5105 76 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 38505645 Nonpathogen - hypothetical protein slr5110 1 None None None 38505612 Common - hypothetical protein slr5077 11 COG5464 COG5464, Uncharacterized conserved protein Function unknown 38505655 Nonpathogen - hypothetical protein ssr5120 1 None None None 38505595 Common - two-component hybrid sensor and regulator sll5060 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 38505593 Common - hypothetical protein slr5058 23 COG5635 COG5635, Predicted NTPase (NACHT family) Signal transduction mechanisms 38505576 Common - transposase sll5041 80 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 38505562 Nonpathogen - hypothetical protein ssl5027 5 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 38505588 Nonpathogen - hypothetical protein slr5053 3 None None None 38505641 Nonpathogen - hypothetical protein ssr5106 3 None None None 38505544 Nonpathogen - hypothetical protein ssr5009 1 None None None 38505571 Common - sulfide-quinone reductase sll5036 119 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 38505578 Common - hypothetical protein sll5043 146 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 38505634 Nonpathogen - hypothetical protein ssl5099 5 COG3183 COG3183, Predicted restriction endonuclease Defense mechanisms 38505580 Nonpathogen - hypothetical protein ssl5045 1 None None None 38505629 Common - plasmid stabilization protein sll5094 54 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 38505653 Common - hypothetical protein slr5118 11 COG5464 COG5464, Uncharacterized conserved protein Function unknown 38505619 Common - hypothetical protein sll5084 51 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 38505614 Common - hypothetical protein sll5079 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 38505600 Nonpathogen - hypothetical protein ssl5065 1 None None None 38505666 Common - transposase sll5131 24 COG3385 COG3385, FOG: Transposase and inactivated derivatives DNA replication, recombination, and repair 38505591 Common - hypothetical protein slr5056 98 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 38505620 Nonpathogen - hypothetical protein slr5085 1 None None None 38505647 Nonpathogen - hypothetical protein slr5112 4 None None None 38505609 Nonpathogen - hypothetical protein ssr5074 1 None None None 38505636 Common - hypothetical protein slr5101 13 None None None 38505573 Common - chromate transporter slr5038 116 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 38505551 Common - hypothetical protein slr5016 7 COG3513 COG3513, Uncharacterized protein conserved in bacteria Function unknown 38505541 Nonpathogen - hypothetical protein sll5006 1 None None None 38505568 Nonpathogen - hypothetical protein sll5033 8 None None None 38505548 Common - hypothetical protein slr5013 10 None None None 38505539 Nonpathogen - hypothetical protein sll5004 1 COG2442 COG2442, Uncharacterized conserved protein Function unknown 38505607 Nonpathogen - hypothetical protein sll5072 2 None None None 38505598 Nonpathogen - hypothetical protein sll5063 6 None None None 38505626 Nonpathogen - hypothetical protein ssl5091 1 None None None 38505661 Nonpathogen - hypothetical protein slr5126 1 None None None 38505663 Nonpathogen - hypothetical protein sll5128 1 None None None 38505659 Common - hypothetical protein slr5124 9 COG5464 COG5464, Uncharacterized conserved protein Function unknown 38505543 Nonpathogen - hypothetical protein ssl5008 1 None None None 38505583 Common - hypothetical protein sll5048 119 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 38505646 Nonpathogen - hypothetical protein slr5111 1 None None None 38505657 Common - hypothetical protein sll5122 181 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 38505638 Nonpathogen - hypothetical protein ssl5103 1 None None None 38505546 Common - hypothetical protein ssr5011 56 COG1872 COG1872, Uncharacterized conserved protein Function unknown 38505625 Nonpathogen - hypothetical protein sll5090 1 None None None 38505555 Common - hypothetical protein ssr5020 66 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 38505566 Common - hypothetical protein ssl5031 4 None None None 38505596 Common - hypothetical protein sll5061 13 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 38505575 Common - transposase slr5040 46 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 38505610 Common - hypothetical protein sll5075 10 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 38505615 Common - non-heme chloroperoxidase sll5080 106 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 38505553 Common - hypothetical protein slr5018 48 COG2361 COG2361, Uncharacterized conserved protein Function unknown 38505643 Common - hypothetical protein ssl5108 3 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair