Photorhabdus luminescens subsp. laumondii TTO1, complete genome NC_005126 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 37525358 Common - hypothetical protein plu1402 39 COG2944 COG2944, Predicted transcriptional regulator Transcription 37526563 Common yfeA Iron (chelated) ABC transporter, periplasmic-binding protein YfeA plu2672 177 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 37526717 Common holB DNA polymerase III subunit delta' plu2827 214 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 37524919 Common - hypothetical protein plu0927 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527861 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase plu4006 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 37524122 Common nudE ADP-ribose diphosphatase NudE plu0096 115 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 37527520 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase plu3656 209 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 37524921 Common - hypothetical protein plu0929 26 COG5573 COG5573, Predicted nucleic-acid-binding protein, contains PIN domain General function prediction only 37525086 Common ISPlu6J Transposase, IS982 Familly plu1116 30 None None None 37527628 Common sctW Type III secretion control protein SctW plu3766 9 None None None 37524651 Common - hypothetical protein plu0650 92 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 37524679 Common cdsA CDP-diglyceride synthase plu0678 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 37524637 Pathogen - hypothetical protein plu0636 1 None None None 37528203 Common dgkA diacylglycerol kinase (DAGK) (diglyceride kinase) (DGK) plu4375 121 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 37526916 Common - hypothetical protein plu3028 8 None None None 37527053 Common purF amidophosphoribosyltransferase plu3167 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 37527495 Common - hypothetical protein plu3627 53 COG3655 COG3655, Predicted transcriptional regulator Transcription 37528569 Common metF 5,10-methylenetetrahydrofolate reductase plu4754 150 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 37528096 Common - hypothetical protein plu4264 7 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 37526100 Common - hypothetical protein plu2184 43 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 37526057 Common - hypothetical protein plu2141 75 COG2983 COG2983, Uncharacterized conserved protein Function unknown 37526722 Common acpP acyl carrier protein (cytosolic activating factor) (CAF) plu2832 178 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524347 Common ISPlu9K Transposase, IS4 family plu0334 26 None None None 37526027 Common ruvA Holliday junction DNA helicase motor protein plu2111 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 37527792 Common - hypothetical protein plu3937 135 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527076 Common - hypothetical protein plu3191 170 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 37527578 Common - hypothetical protein plu3715 26 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37528562 Common argE acetylornithine deacetylase plu4745 196 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 37528032 Common - hypothetical protein plu4194 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37526443 Common selD selenophosphate synthetase plu2551 147 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 37527903 Common - hypothetical protein plu4056 14 None None None 37525320 Common - hypothetical protein plu1364 7 None None None 37524294 Pathogen - hypothetical protein plu0275 1 None None None 37524673 Common rpsB 30S ribosomal protein S2 plu0672 227 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 37524910 Common - hypothetical protein plu0918 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526411 Common - hypothetical protein plu2519 4 None None None 37526962 Common menF menaquinone-specific isochorismate synthase plu3074 222 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37527127 Pathogen - hypothetical protein plu3244 5 None None None 37528029 Common - hypothetical protein plu4191 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524705 Common cysI sulfite reductase [NADPH] hemoprotein beta-component (SIR-HP) plu0704 135 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 37526235 Common - hypothetical protein plu2327 10 COG3274 COG3274, Uncharacterized protein conserved in bacteria Function unknown 37525344 Common cysT sulfate/thiosulfate transporter subunit plu1388 236 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 37524670 Common dapD 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase plu0669 140 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 37524276 Pathogen - hypothetical protein plu0257 2 None None None 37524825 Common - hypothetical protein plu0826 50 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524862 Common - hypothetical protein plu0867 125 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 37524680 Common ecfE zinc metallopeptidase plu0679 213 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 37527408 Common - hypothetical protein plu3535 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37527334 Common - hypothetical protein plu3460 17 COG4382 COG4382, Mu-like prophage protein gp16 Function unknown 37526352 Common tccB2 Insecticidal toxin complex protein TccB2 plu2459 11 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 37526075 Common - hypothetical protein plu2159 23 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37528677 Common slmA nucleoid occlusion protein plu4868 53 COG1309 AcrR, Transcriptional regulator Transcription 37528420 Common - hypothetical protein plu4601 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37526333 Pathogen - hypothetical protein plu2438 1 None None None 37524303 Common - hypothetical protein plu0285 11 None None None 37528705 Common - hypothetical protein plu4899 29 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 37524613 Common surA peptidyl-prolyl cis-trans isomerase SurA plu0611 161 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 37526250 Common - hypothetical protein plu2348 21 COG4922 COG4922, Uncharacterized protein conserved in bacteria Function unknown 37526084 Common pntB pyridine nucleotide transhydrogenase plu2168 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 37525382 Common sdhA succinate dehydrogenase flavoprotein subunit plu1428 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 37525415 Common - hypothetical protein plu1463 20 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37526466 Common - C32 tRNA thiolase plu2575 165 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 37527746 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase plu3887 230 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 161579570 Common pspF phage shock protein operon transcriptional activator plu2586 171 COG1221 PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 37528436 Common pldB lysophospholipase L2 plu4619 57 COG2267 PldB, Lysophospholipase Lipid metabolism 37525443 Common - hypothetical protein plu1492 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37526400 Common - hypothetical protein plu2508 59 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 37528459 Common cyaY frataxin-like protein plu4642 45 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 37528242 Common rmuC DNA recombination protein RmuC plu4414 132 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 37526107 Common - hypothetical protein plu2193 11 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37526124 Common - hypothetical protein plu2210 32 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37528381 Common - hypothetical protein plu4562 22 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525181 Common - hypothetical protein plu1213 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528184 Common ISPlu10B Transposase, IS630 family plu4356 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525994 Common - hypothetical protein plu2077 2 None None None 37525144 Common - coproporphyrinogen III oxidase plu1176 206 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 37528227 Common trkH potassium transporter plu4399 159 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 37526759 Common rplY 50S ribosomal protein L25 plu2869 142 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 37528713 Common - hypothetical protein plu4907 185 COG0759 COG0759, Uncharacterized conserved protein Function unknown 37528192 Common - tRNA-dihydrouridine synthase A plu4364 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 37528416 Common psd phosphatidylserine decarboxylase plu4597 96 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 37525398 Common - hypothetical protein plu1444 4 COG3565 COG3565, Predicted dioxygenase of extradiol dioxygenase family General function prediction only 37528322 Common - hypothetical protein plu4501 20 COG3787 COG3787, Uncharacterized protein conserved in bacteria Function unknown 37528534 Common rpsQ 30S ribosomal protein S17 plu4717 235 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 37524271 Common - hypothetical protein plu0252 9 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 37528042 Pathogen - hypothetical protein plu4204 1 None None None 37524472 Pathogen - hypothetical protein plu0463 5 None None None 37524766 Common - hypothetical protein plu0765 4 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37528512 Common def peptide deformylase plu4695 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 37525655 Pathogen - hypothetical protein plu1718 2 COG4675 MdpB, Microcystin-dependent protein Function unknown 37526183 Common - hypothetical protein plu2270 8 None None None 37528452 Common corA magnesium/nickel/cobalt transporter CorA plu4635 118 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 37526307 Pathogen - hypothetical protein plu2407 1 None None None 37525735 Common - hypothetical protein plu1801 158 COG3892 COG3892, Uncharacterized protein conserved in bacteria Function unknown 37528594 Common - hypothetical protein plu4779 15 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37528464 Common hemY putative protoheme IX biogenesis protein plu4647 48 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 37525121 Pathogen - hypothetical protein plu1153 1 None None None 37527542 Common mutH DNA mismatch repair protein plu3678 28 COG3066 MutH, DNA mismatch repair protein DNA replication, recombination, and repair 37525503 Common udk uridine kinase plu1556 96 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 37525553 Common ISPlu4E Transposase, IS4 family plu1606 19 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37524178 Common - hypothetical protein plu0156 7 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 37527514 Common ftsA cell division protein FtsA plu3650 180 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 37524734 Pathogen - hypothetical protein plu0733 1 None None None 37526847 Common - hypothetical protein plu2957 6 None None None 37524129 Common - hypothetical protein plu0103 209 COG4566 TtrR, Response regulator Signal transduction mechanisms 37526219 Common - hypothetical protein plu2308 40 COG3636 COG3636, Predicted transcriptional regulator Transcription 37527028 Common - autoinducer-2 (AI-2) kinase plu3141 180 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 37527534 Common - hypothetical protein plu3670 13 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 37525110 Pathogen - hypothetical protein plu1142 1 None None None 37524393 Common - hypothetical protein plu0382 64 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 37527021 Common - hypothetical protein plu3134 217 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 37526117 Common hcaR DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism plu2203 193 COG0583 LysR, Transcriptional regulator Transcription 37526200 Common - hypothetical protein plu2287 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 37528141 Common - hypothetical protein plu4310 14 COG5463 COG5463, Predicted integral membrane protein Function unknown 37525830 Common - hypothetical protein plu1907 4 None None None 37524460 Common - hypothetical protein plu0451 9 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 37525353 Common zipA cell division protein ZipA plu1397 42 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 37527081 Common hutG formimidoylglutamase plu3196 82 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 37524373 Pathogen - hypothetical protein plu0362 4 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 37526519 Common ppsA phosphoenolpyruvate synthase plu2628 236 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 37524097 Pathogen - hypothetical protein plu0071 1 None None None 37526559 Common infC translation initiation factor IF-3 plu2668 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 37527445 Pathogen - hypothetical protein plu3576 1 None None None 37526813 Pathogen - hypothetical protein plu2923 1 None None None 37528606 Common cpxP periplasmic protein precursor plu4793 16 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 37525644 Common - hypothetical protein plu1706 43 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37524645 Common argA N-acetylglutamate synthase plu0644 198 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 37527071 Common - hypothetical protein plu3186 17 None None None 37526903 Common - hypothetical protein plu3015 216 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37528073 Pathogen - hypothetical protein plu4240 2 None None None 37525072 Pathogen - hypothetical protein plu1091 4 None None None 37526397 Pathogen - hypothetical protein plu2505 1 None None None 37525361 Common pgm phosphoglucomutase plu1407 225 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 37525079 Pathogen - hypothetical protein plu1099 1 None None None 37526864 Pathogen - hypothetical protein plu2974 1 None None None 37525901 Common sgcA Putative phosphotransferase enzyme II, A component SgcA plu1979 62 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 37527136 Common - hypothetical protein plu3253 52 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37527973 Common ISPlu6D Transposase, IS982 family plu4128 30 None None None 37525494 Common cdd cytidine deaminase plu1547 31 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 37526873 Pathogen - hypothetical protein plu2983 1 None None None 37528003 Common ISplu12A Transposase, IS66 family plu4164 46 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524666 Common - tRNA pseudouridine synthase C plu0665 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 37526630 Common - hypothetical protein plu2740 4 None None None 37528120 Common iunH inosine-uridine preferring nucleoside hydrolase (IU-nucleoside hydrolase) (purine nucleosidase) plu4289 87 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 37525533 Common artQ arginine transporter permease subunit ArtQ plu1586 173 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 37527868 Common sspA stringent starvation protein A plu4013 104 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 37527141 Common - hypothetical protein plu3258 67 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525220 Common luxS S-ribosylhomocysteinase plu1253 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 37526034 Common pykA pyruvate kinase plu2118 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 37525562 Common - hypothetical protein plu1617 24 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37524649 Common mltA murein transglycosylase A plu0648 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 37528104 Common - hypothetical protein plu4272 6 None None None 37527763 Common ahpC alkyl hydroperoxide reductase, small subunit (antioxidant) plu3907 220 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 37525215 Common - competence damage-inducible protein A plu1248 193 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 37525828 Pathogen - hypothetical protein plu1905 1 None None None 37525335 Common - outer membrane protein assembly complex subunit YfgL plu1379 113 COG1520 COG1520, FOG: WD40-like repeat Function unknown 37524431 Common slyD FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) plu0422 128 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 37526604 Common xseA exodeoxyribonuclease VII large subunit plu2714 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 37528706 Common hipA HipA protein plu4900 65 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 37525585 Common - hypothetical protein plu1641 3 None None None 37525577 Common - hypothetical protein plu1633 99 COG2835 COG2835, Uncharacterized conserved protein Function unknown 37526940 Common nrdA ribonucleotide-diphosphate reductase subunit alpha plu3052 209 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 37524148 Common gdhA glutamate dehydrogenase plu0122 173 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 37526297 Common - hypothetical protein plu2396 10 None None None 37524857 Common - hypothetical protein plu0862 47 COG0456 RimI, Acetyltransferases General function prediction only 37527606 Common wzb Low molecular weight protein-tyrosine-phosphatase Wzb plu3744 118 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 37527617 Common - hypothetical protein plu3755 6 None None None 37527475 Pathogen - hypothetical protein plu3607 1 None None None 37525402 Common cydB Cytochrome D ubiquinol oxidase subunit II (Cytochrome BD-I oxidase subunit II) plu1450 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 37527778 Common - hypothetical protein plu3923 20 None None None 37524550 Common - hypothetical protein plu0544 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37524871 Common dksA DnaK transcriptional regulator DksA plu0876 119 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 37525244 Common mprA transcriptional repressor MprA plu1277 69 COG1846 MarR, Transcriptional regulators Transcription 37526329 Common cysB transcriptional regulator CysB plu2434 189 COG0583 LysR, Transcriptional regulator Transcription 37528611 Common wblC WblC protein plu4798 188 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 37527889 Common - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase plu4037 107 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 37524760 Common - hypothetical protein plu0759 154 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 37527804 Common parC DNA topoisomerase IV subunit A plu3949 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 37525013 Common - hypothetical protein plu1028 25 None None None 37526680 Common - hypothetical protein plu2790 104 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 37528255 Pathogen - hypothetical protein plu4427 1 None None None 37528058 Common - hypothetical protein plu4222 53 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37526245 Pathogen - hypothetical protein plu2343 1 None None None 37525466 Common - hypothetical protein plu1515 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 37525606 Common - hypothetical protein plu1665 43 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37525668 Common - hypothetical protein plu1731 3 None None None 37525984 Common ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase plu2067 193 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 37526049 Common - hypothetical protein plu2133 28 COG3065 Slp, Starvation-inducible outer membrane lipoprotein Cell envelope biogenesis, outer membrane 37525029 Pathogen - hypothetical protein plu1044 1 None None None 37525936 Common - hypothetical protein plu2019 15 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524927 Common - hypothetical protein plu0935 22 COG2516 COG2516, Biotin synthase-related enzyme General function prediction only 37528130 Common - hypothetical protein plu4299 62 COG1476 COG1476, Predicted transcriptional regulators Transcription 37524380 Common - hypothetical protein plu0369 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 37526659 Common - 3-phosphoshikimate 1-carboxyvinyltransferase plu2769 224 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 37524931 Common mltD predicted membrane-bound lytic murein transglycosylase D plu0939 155 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 37526834 Pathogen - hypothetical protein plu2944 1 None None None 37525198 Common - hypothetical protein plu1231 78 COG0388 COG0388, Predicted amidohydrolase General function prediction only 37525780 Common cheA chemotaxis protein CheA plu1851 149 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 37526275 Common - hypothetical protein plu2374 57 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 37524207 Common cpmD CpmD protein involved in carbapenem biosynthesis plu0185 109 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 37526836 Common - hypothetical protein plu2946 3 None None None 37525599 Pathogen - hypothetical protein plu1658 1 None None None 37524068 Common rpmE 50S ribosomal protein L31 plu0036 120 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 37527360 Common - hypothetical protein plu3487 97 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37527167 Common treC trehalose-6-phosphate hydrolase plu3287 168 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 37524115 Common aroB 3-dehydroquinate synthase plu0089 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 37528495 Common - hypothetical protein plu4678 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37525457 Common ybhR ABC transporter permease protein YbhR plu1506 188 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 37526338 Pathogen - hypothetical protein plu2443 1 None None None 37527395 Common - hypothetical protein plu3522 4 None None None 37527086 Common fadI 3-ketoacyl-CoA thiolase plu3201 173 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 37526390 Common hns DNA-binding protein H-NS (histone-like protein HLP-II) plu2498 25 COG2916 Hns, DNA-binding protein H-NS General function prediction only 37526379 Common cls cardiolipin synthetase plu2487 153 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 37528262 Common ISPlu3D Transposase, IS630 family plu4438 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524739 Common ISPlu10I Transposase, IS630 family plu0738 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524477 Common ISPlu10J Transposase, IS630 family plu0468 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525508 Pathogen - hypothetical protein plu1561 2 None None None 37527551 Pathogen - hypothetical protein plu3687 1 None None None 37524770 Common mrfA MrfA protein plu0769 17 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37526359 Common trpB tryptophan synthase subunit beta plu2466 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 37526496 Common purR DNA-binding transcriptional repressor PurR plu2605 128 COG1609 PurR, Transcriptional regulators Transcription 37525202 Common - hypothetical protein plu1235 78 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 37525831 Common - hypothetical protein plu1908 6 None None None 37527855 Pathogen - hypothetical protein plu4000 2 None None None 37524975 Common - hypothetical protein plu0985 202 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37528069 Common - hypothetical protein plu4233 32 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 37528302 Common pepA leucyl aminopeptidase plu4481 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 37526769 Common - hypothetical protein plu2879 16 None None None 37524392 Common dsbA periplasmic protein disulfide isomerase I plu0381 62 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 37527598 Common - hypothetical protein plu3736 155 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 37528012 Pathogen - hypothetical protein plu4174 3 None None None 37525384 Common kgd alpha-ketoglutarate decarboxylase plu1430 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 37527665 Common - hypothetical protein plu3803 10 None None None 37525564 Common serC phosphoserine aminotransferase plu1619 116 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 37527052 Common ubiX 3-octaprenyl-4-hydroxybenzoate carboxy-lyase plu3166 151 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 37525914 Common - hypothetical protein plu1995 10 None None None 37525495 Common - predicted inner membrane protein plu1548 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 37525918 Common - hypothetical protein plu1999 11 None None None 37527737 Common cyoC cytochrome o ubiquinol oxidase subunit III plu3877 158 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 37526527 Common - hypothetical protein plu2636 249 COG4559 COG4559, ABC-type hemin transport system, ATPase component Inorganic ion transport and metabolism 37525435 Common bioA adenosylmethionine--8-amino-7-oxononanoate transaminase plu1484 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 37528084 Common rsmC 16S ribosomal RNA m2G1207 methyltransferase plu4252 92 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 37524876 Common hrpB ATP-dependent RNA helicase HrpB plu0882 133 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 37524606 Common carB carbamoyl phosphate synthase large subunit plu0604 237 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 37526210 Common - hypothetical protein plu2297 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 37526373 Common - hypothetical protein plu2481 14 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 37527958 Common ISPlu11B Transposase, IS982 family plu4111 29 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37528650 Common - hypothetical protein plu4841 190 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 37528368 Common mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (Murein peptide ligase) plu4549 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 37528541 Common rplW 50S ribosomal protein L23 plu4724 214 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 37524200 Common eda keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase plu0178 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 37528664 Common kdtX Lipopolysaccharide core biosynthesis glycosyl transferase KdtX plu4855 121 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37525254 Common nrdH Glutaredoxin-like protein NrdH plu1287 37 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 37527818 Common ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase plu3963 225 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 37527679 Common - short chain dehydrogenase plu3819 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 37525370 Common kdpE DNA-binding response regulator in two-component regulatory system with KdpD plu1416 204 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37528296 Common - hypothetical protein plu4475 16 COG1476 COG1476, Predicted transcriptional regulators Transcription 37526066 Common hrpA ATP-dependent helicase plu2150 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 37527713 Common hha hemolysin expression-modulating protein plu3853 12 None None None 37525020 Common - hypothetical protein plu1035 21 None None None 37525515 Common hisB imidazole glycerol-phosphate dehydratase/histidinol phosphatase plu1568 217 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 37526748 Common fruK 1-phosphofructokinase plu2858 112 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 37527850 Common - hypothetical protein plu3995 14 COG5393 COG5393, Predicted membrane protein Function unknown 37527882 Common - hypothetical protein plu4030 15 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 37526702 Common lolE outer membrane-specific lipoprotein transporter subunit LolE plu2812 180 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 37528088 Common phoA bacterial alkaline phosphatase plu4256 84 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 37528329 Common - phosphoenolpyruvate synthase plu4508 152 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 37528385 Common - hypothetical protein plu4566 38 COG1834 COG1834, N-Dimethylarginine dimethylaminohydrolase Amino acid transport and metabolism 37527068 Common tctA TctA protein plu3183 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 37524622 Common ptsP fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain plu0621 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 37528548 Common coaA pantothenate kinase plu4731 74 COG1072 CoaA, Panthothenate kinase Coenzyme metabolism 37526409 Common - hypothetical protein plu2517 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37526953 Common - hypothetical protein plu3065 66 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37527688 Common ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor plu3828 139 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 37528294 Common - hypothetical protein plu4473 16 None None None 37526263 Common - hypothetical protein plu2361 20 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 37527723 Common - hypothetical protein plu3863 48 COG0824 FcbC, Predicted thioesterase General function prediction only 37525605 Common - hypothetical protein plu1664 34 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37527951 Common ftsY cell division protein plu4104 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 37528522 Common rpsM 30S ribosomal protein S13 plu4705 248 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 37525753 Common pyrC dihydroorotase plu1819 87 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 37525083 Pathogen - hypothetical protein plu1110 1 None None None 37526571 Common - hypothetical protein plu2680 156 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 37524186 Common - hypothetical protein plu0164 130 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37528051 Pathogen - hypothetical protein plu4215 2 None None None 37524781 Common - hypothetical protein plu0780 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37526804 Common - hypothetical protein plu2914 5 None None None 37525047 Pathogen - hypothetical protein plu1062 3 None None None 37524306 Common - hypothetical protein plu0288 12 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 37524406 Common prkB phosphoribulokinase plu0397 52 COG3954 PrkB, Phosphoribulokinase Energy production and conversion 37525815 Pathogen - hypothetical protein plu1891 3 None None None 37524340 Common ISPlu3Ab Transposase, IS630 family plu0326 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524524 Common tcaC Insecticidal toxin complex protein TcaC plu0515 20 None None None 37525064 Common - hypothetical protein plu1083 21 None None None 37524264 Common - hypothetical protein plu0245 12 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 37525590 Common - hypothetical protein plu1649 4 None None None 37524196 Common - hypothetical protein plu0174 123 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 37527006 Pathogen - hypothetical protein plu3118 1 None None None 37526156 Common - hypothetical protein plu2243 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 37524562 Common slt lytic murein transglycosylase plu0556 168 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 37524366 Common - hypothetical protein plu0353 70 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37524703 Common - hypothetical protein plu0702 131 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 37527681 Common - hypothetical protein plu3821 219 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 37526650 Common purM phosphoribosylaminoimidazole synthetase plu2760 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 37525846 Common flgJ peptidoglycan hydrolase plu1923 75 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 37527771 Common - hypothetical protein plu3915 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37528659 Common walV WalW protein plu4850 12 None None None 37524617 Common hepA ATP-dependent helicase HepA plu0615 133 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 37527647 Common sctJ Type III secretion component protein SctJ plu3785 55 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 37527109 Pathogen - hypothetical protein plu3226 4 None None None 37524094 Pathogen - hypothetical protein plu0064 3 None None None 37525312 Pathogen - hypothetical protein plu1354 1 None None None 37525957 Common - hypothetical protein plu2040 59 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 37524081 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA plu0049 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 37527905 Common - hypothetical protein plu4058 11 None None None 37525856 Common - hypothetical protein plu1933 13 COG3905 COG3905, Predicted transcriptional regulator Transcription 37526939 Common ubiG 3-demethylubiquinone-9 3-methyltransferase plu3051 169 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 37525306 Pathogen - hypothetical protein plu1346 4 None None None 37526106 Common - hypothetical protein plu2192 195 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 37527874 Common degS serine endoprotease plu4022 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 37528471 Common wzxE Lipopolysaccharide biosynthesis protein plu4654 30 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 37527813 Common ISPlu3H Transposase, IS630 family plu3958 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527556 Pathogen - hypothetical protein plu3692 3 None None None 37526869 Pathogen - hypothetical protein plu2979 1 None None None 37525372 Common kdpC potassium-transporting ATPase subunit C plu1418 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 37526003 Common - hypothetical protein plu2086 209 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 37525946 Common - hypothetical protein plu2029 10 None None None 37526341 Common - hypothetical protein plu2448 5 None None None 37526596 Pathogen - hypothetical protein plu2705 1 None None None 37526664 Common - multidrug efflux system subunit MdtA plu2774 163 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 37527170 Common hctA putative 3-phenylpropionic acid transporter plu3290 79 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37526437 Pathogen - hypothetical protein plu2545 1 None None None 37528519 Common rpoA DNA-directed RNA polymerase subunit alpha plu4702 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 37526643 Pathogen - hypothetical protein plu2753 2 None None None 37525150 Common - Holliday junction resolvase-like protein plu1182 159 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 37525261 Common dacA D-alanyl-D-alanine carboxypeptidase fraction A plu1294 154 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 37525899 Common - hypothetical protein plu1977 58 COG1959 COG1959, Predicted transcriptional regulator Transcription 37528414 Common orn oligoribonuclease plu4595 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 37526094 Common - universal stress protein UspE plu2178 45 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 37525161 Common gmhA phosphoheptose isomerase plu1193 123 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 37524055 Common - hypothetical protein plu0023 35 COG3948 COG3948, Phage-related baseplate assembly protein General function prediction only 37526947 Pathogen - hypothetical protein plu3059 5 None None None 37528143 Common - hypothetical protein plu4312 9 None None None 37526277 Common - hypothetical protein plu2376 9 None None None 37527249 Common smpA hypothetical protein plu3375 61 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 37524966 Common tccC4 Insecticidal toxin complex protein TccC4 plu0976 25 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37527042 Pathogen - hypothetical protein plu3156 5 None None None 37525692 Pathogen - hypothetical protein plu1757 1 None None None 37525867 Common fliJ flagellar biosynthesis chaperone plu1944 41 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 37524537 Pathogen - hypothetical protein plu0531 1 None None None 37526476 Common pspA Phage shock protein A plu2585 72 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 37528041 Common - hypothetical protein plu4203 22 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 37527673 Common - hypothetical protein plu3813 9 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 37524474 Common - hypothetical protein plu0465 6 None None None 37525863 Common fliN flagellar motor switch protein FliN plu1940 125 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 37527256 Common - hypothetical protein plu3382 7 None None None 37525656 Common - hypothetical protein plu1719 10 None None None 37526202 Common - hypothetical protein plu2289 18 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 37526725 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III plu2835 229 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 37525037 Common pilO hypothetical protein plu1052 7 None None None 37524949 Common - hypothetical protein plu0959 19 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37527262 Common - hypothetical protein plu3388 3 None None None 37524313 Common - hypothetical protein plu0296 70 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 37526921 Common - hypothetical protein plu3033 14 None None None 37527969 Common frdA fumarate reductase flavoprotein subunit plu4124 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 37524824 Pathogen - hypothetical protein plu0825 4 None None None 37527111 Pathogen - hypothetical protein plu3228 5 None None None 37527900 Common - hypothetical protein plu4050 11 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524891 Common - hypothetical protein plu0899 211 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37526525 Common - hypothetical protein plu2634 128 COG4558 ChuT, ABC-type hemin transport system, periplasmic component Inorganic ion transport and metabolism 37527529 Common ilvH acetolactate synthase 3 regulatory subunit plu3665 191 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 37527201 Common - hypothetical protein plu3324 97 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 37526369 Common - hypothetical protein plu2476 94 COG1262 COG1262, Uncharacterized conserved protein Function unknown 37524239 Common - hypothetical protein plu0219 177 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 37524184 Common - hypothetical protein plu0162 123 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37527347 Pathogen - hypothetical protein plu3474 2 None None None 37526190 Common - hypothetical protein plu2277 22 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 37526538 Common - hypothetical protein plu2647 175 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 37524160 Common - hypothetical protein plu0134 10 None None None 37528485 Common ilvC ketol-acid reductoisomerase plu4668 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 37524511 Common - hypothetical protein plu0502 86 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 37527938 Common - hypothetical protein plu4091 75 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37524224 Common bioH Biotin biosynthesis protein BioH plu0204 140 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37528694 Common fdoH formate dehydrogenase-O, iron-sulfur subunit (formate dehydrogenase-O beta subunit) (FDH-Z beta subunit) (aerobic formate dehydrogenase iron-sulfur subunit) plu4888 161 COG0437 HybA, Fe-S-cluster-containing hydrogenase components 1 Energy production and conversion 37526169 Pathogen - hypothetical protein plu2256 2 None None None 37524072 Common atpD F0F1 ATP synthase subunit beta plu0040 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 161579579 Common phoU transcriptional regulator PhoU plu0218 194 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 37525422 Common aroG phospho-2-dehydro-3-deoxyheptonate aldolase plu1470 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 37526852 Common - hypothetical protein plu2962 12 None None None 37524712 Common cysC adenylylsulfate kinase plu0711 145 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 37526859 Common eutA reactivating factor for ethanolamine ammonia lyase plu2969 17 COG4819 EutA, Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition Amino acid transport and metabolism 37527924 Common - hypothetical protein plu4077 11 None None None 37526799 Common - hypothetical protein plu2909 4 None None None 37528571 Common metB cystathionine gamma-synthase plu4756 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 37525641 Pathogen - hypothetical protein plu1703 1 None None None 37528563 Common ppc phosphoenolpyruvate carboxylase plu4746 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 37528251 Common - hypothetical protein plu4423 134 COG2252 COG2252, Permeases General function prediction only 37527798 Common sohA putative regulator PrlF plu3943 10 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 37527990 Common - hypothetical protein plu4145 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37525337 Pathogen - hypothetical protein plu1381 1 None None None 37526771 Common - hypothetical protein plu2881 6 None None None 37524548 Pathogen - hypothetical protein plu0542 1 None None None 37526268 Common - hypothetical protein plu2366 12 COG2336 MazE, Growth regulator Signal transduction mechanisms 37524458 Common - hypothetical protein plu0449 5 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 37525666 Common - hypothetical protein plu1729 40 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37524887 Common - hypothetical protein plu0895 16 COG1476 COG1476, Predicted transcriptional regulators Transcription 37524755 Common - hypothetical protein plu0754 11 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 37527289 Common - hypothetical protein plu3415 3 None None None 37528138 Common rtcB Protein RtcB plu4307 121 COG1690 RtcB, Uncharacterized conserved protein Function unknown 37527181 Common - hypothetical protein plu3302 54 COG4637 COG4637, Predicted ATPase General function prediction only 37524117 Common - hypothetical protein plu0091 142 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 37524039 Common asd aspartate-semialdehyde dehydrogenase plu0007 195 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 37525625 Common - hypothetical protein plu1687 43 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37524799 Common - hypothetical protein plu0798 177 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 37527213 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ plu3337 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 37528656 Common rfaD ADP-L-glycero-D-mannoheptose-6-epimerase plu4847 222 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37525091 Pathogen - hypothetical protein plu1123 4 None None None 37528377 Common - hypothetical protein plu4558 18 COG3054 COG3054, Predicted transcriptional regulator General function prediction only 37526178 Common - hypothetical protein plu2265 25 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 37527537 Common leuA 2-isopropylmalate synthase plu3673 217 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 37528383 Common - hypothetical protein plu4564 15 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 37526162 Common - hypothetical protein plu2249 19 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 37528684 Common - hypothetical protein plu4876 44 None None None 37524370 Common pmt1 hypothetical protein plu0359 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37525139 Common - hypothetical protein plu1171 25 COG3171 COG3171, Uncharacterized protein conserved in bacteria Function unknown 37528304 Common valS valyl-tRNA synthetase plu4483 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37524800 Common tnaA tryptophanase plu0799 44 COG3033 TnaA, Tryptophanase Amino acid transport and metabolism 37527947 Common garK Glycerate kinase 2 plu4100 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 37525766 Pathogen - hypothetical protein plu1833 1 None None None 37526485 Common gst glutathionine S-transferase plu2594 107 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 37525761 Common - hypothetical protein plu1828 33 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 37527093 Common - hypothetical protein plu3210 5 COG5642 COG5642, Uncharacterized conserved protein Function unknown 37524165 Pathogen - hypothetical protein plu0140 3 None None None 37527425 Common xerD site-specific tyrosine recombinase XerD plu3552 226 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37524907 Common - hypothetical protein plu0915 237 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 37527742 Common apbA 2-dehydropantoate 2-reductase plu3882 100 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 37524341 Pathogen - hypothetical protein plu0327 1 None None None 37524898 Common mtnA 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase plu0906 110 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 37525777 Common flhC transcriptional activator FlhC plu1848 27 None None None 37525995 Common - hypothetical protein plu2078 2 None None None 37526787 Pathogen - hypothetical protein plu2897 1 None None None 37526747 Common nfo endonuclease IV plu2857 99 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 37524412 Common murQ N-acetylmuramic acid-6-phosphate etherase plu0403 87 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 37528393 Common - 23S rRNA (guanosine-2'-O-)-methyltransferase plu4574 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 37527588 Common abgA aminobenzoyl-glutamate utilization protein A plu3726 169 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 37525423 Common gpmA phosphoglyceromutase plu1471 163 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 37526121 Common hcaB 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase plu2207 224 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37527043 Common - hypothetical protein plu3157 52 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 37528153 Common - hypothetical protein plu4323 11 COG3423 Nlp, Predicted transcriptional regulator Transcription 37527436 Common - hypothetical protein plu3564 35 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 37526362 Common - hypothetical protein plu2469 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 37524247 Common - hypothetical protein plu0228 19 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 37524428 Common - Recombinase, Type 1 fimbriae regulatory protein plu0419 209 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526348 Pathogen - hypothetical protein plu2455 1 None None None 37528332 Common - hypothetical protein plu4511 37 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 37528431 Pathogen - hypothetical protein plu4614 4 None None None 37528404 Common - hypothetical protein plu4585 209 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 37525793 Common - hypothetical protein plu1869 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 37527824 Common glnE bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase plu3969 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 37527277 Common - hypothetical protein plu3403 16 COG3566 COG3566, Uncharacterized protein conserved in bacteria Function unknown 37528238 Common tatA Sec-independent protein translocase protein plu4410 47 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 37524940 Common - hypothetical protein plu0948 15 COG1846 MarR, Transcriptional regulators Transcription 37527940 Pathogen - hypothetical protein plu4093 1 None None None 37525737 Common - putative symporter YidK plu1803 86 COG4146 COG4146, Predicted symporter General function prediction only 37526964 Pathogen - hypothetical protein plu3076 3 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 37528122 Pathogen - hypothetical protein plu4291 3 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 37526881 Common cbiH precorrin-3B C17-methyltransferase plu2991 122 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 37525681 Common - hypothetical protein plu1744 133 COG1309 AcrR, Transcriptional regulator Transcription 37527485 Pathogen - hypothetical protein plu3617 1 None None None 37525486 Common moeB molybdopterin biosynthesis protein MoeB plu1539 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 37525975 Pathogen - hypothetical protein plu2058 1 None None None 37526556 Common pheS phenylalanyl-tRNA synthetase subunit alpha plu2665 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 37526739 Common - hypothetical protein plu2849 178 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 37527286 Pathogen - hypothetical protein plu3412 1 None None None 37524624 Common thyA thymidylate synthase plu0623 139 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 37527982 Common aspA aspartate ammonia-lyase plu4137 217 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 37526973 Common nuoF NADH dehydrogenase I subunit F plu3085 169 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 37524984 Common phfA hypothetical protein plu0994 11 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527016 Common - hypothetical protein plu3128 5 None None None 37527566 Common - hypothetical protein plu3702 4 None None None 37527756 Common - hypothetical protein plu3900 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 37527694 Common fepE ferric enterobactin transport protein plu3834 19 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 37525807 Common - hypothetical protein plu1883 186 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 37527190 Common - hypothetical protein plu3312 10 None None None 37525195 Common - hypothetical protein plu1228 72 COG2144 COG2144, Selenophosphate synthetase-related proteins General function prediction only 37527544 Common speB agmatinase plu3680 153 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 37524446 Common rplJ 50S ribosomal protein L10 plu0437 205 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 37524983 Common phfB hypothetical protein plu0993 18 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527455 Pathogen - hypothetical protein plu3586 1 None None None 37525883 Common - hypothetical protein plu1960 213 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 37524724 Common - hypothetical protein plu0723 16 None None None 37525134 Common - hypothetical protein plu1166 108 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526693 Common - hypothetical protein plu2803 65 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 37527915 Common maf Maf-like protein plu4068 198 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 37526824 Pathogen - hypothetical protein plu2934 1 None None None 37528678 Common pyrE orotate phosphoribosyltransferase plu4869 148 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 37527884 Common - hypothetical protein plu4032 98 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 37526580 Common ftnA nonheme ferritin 1 plu2689 85 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 37526899 Common - hypothetical protein plu3011 57 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 37524324 Common - hypothetical protein plu0307 41 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 37525639 Common - hypothetical protein plu1701 38 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524466 Common malK maltose/maltodextrin transporter ATP-binding protein plu0457 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 37526585 Common pabB para-aminobenzoate synthase component I plu2694 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 37528009 Pathogen - hypothetical protein plu4171 3 None None None 37524741 Common - hypothetical protein plu0740 47 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 37526283 Common rfnE SoxR-reducing system protein RsxE plu2382 76 COG4660 RnfE, Predicted NADH:ubiquinone oxidoreductase, subunit RnfE Energy production and conversion 37525678 Common - hypothetical protein plu1741 202 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 37526416 Common - hypothetical protein plu2524 28 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524414 Pathogen - hypothetical protein plu0405 2 None None None 37526298 Common - hypothetical protein plu2397 10 None None None 37525531 Common rumB 23S rRNA metyluridine methyltransferase plu1584 180 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 37526932 Common - hypothetical protein plu3044 49 COG2128 COG2128, Uncharacterized conserved protein Function unknown 37526705 Common mfd transcription-repair coupling factor plu2815 230 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 37525201 Common - hypothetical protein plu1234 66 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 37527465 Common gcvH glycine cleavage system protein H plu3597 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 37524310 Common tag DNA-3-methyladenine glycosylase I (3-methyladenine-DNA glycosylase I, constitutive) (TAG I) (DNA-3-methyladenine glycosidase I) plu0292 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 37528583 Common glpK glycerol kinase (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK) plu4768 178 COG0554 GlpK, Glycerol kinase Energy production and conversion 37528287 Common - hypothetical protein plu4466 43 COG2944 COG2944, Predicted transcriptional regulator Transcription 37525950 Common aqpZ aquaporin Z plu2033 131 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 37525176 Pathogen - hypothetical protein plu1208 3 None None None 37526403 Common - hypothetical protein plu2511 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 37527626 Pathogen - hypothetical protein plu3764 5 None None None 37524383 Common - hypothetical protein plu0372 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 37526316 Pathogen - hypothetical protein plu2420 2 None None None 37525729 Common - hypothetical protein plu1795 21 None None None 37524497 Common nudC NADH pyrophosphatase plu0488 114 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 37527030 Common lsrA ABC transporter ATP-binding protein (ABC2) LsrA plu3143 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 37525706 Pathogen - hypothetical protein plu1771 1 None None None 37527224 Common - hypothetical protein plu3348 80 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 161579569 Common anmK anhydro-N-acetylmuramic acid kinase plu2598 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 37526491 Common slyA transcriptional regulator SlyA plu2600 86 COG1846 MarR, Transcriptional regulators Transcription 161579562 Common ubiC chorismate pyruvate lyase plu4378 31 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 37526628 Common - hypothetical protein plu2738 22 COG2267 PldB, Lysophospholipase Lipid metabolism 37526876 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase plu2986 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 37528023 Common - hypothetical protein plu4185 78 COG2378 COG2378, Predicted transcriptional regulator Transcription 37524950 Common tccC2 Insecticidal toxin complex protein TccC2 plu0960 38 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37525005 Pathogen - hypothetical protein plu1016 1 None None None 37524123 Common - hypothetical protein plu0097 11 None None None 37524540 Pathogen - hypothetical protein plu0534 2 None None None 37526132 Pathogen - hypothetical protein plu2218 2 None None None 37525785 Common cheB chemotaxis-specific methylesterase plu1856 208 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 37528496 Common - hypothetical protein plu4679 146 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37528078 Pathogen - hypothetical protein plu4245 1 None None None 37524034 Common dnaN DNA polymerase III subunit beta plu0002 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 37527493 Pathogen - hypothetical protein plu3625 3 None None None 37527293 Common - hypothetical protein plu3419 21 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37525878 Common fliA flagellar biosynthesis sigma factor plu1955 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 37528402 Common mutL DNA mismatch repair protein plu4583 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 37525410 Common - hypothetical protein plu1458 10 None None None 37526513 Common sufA iron-sulfur cluster assembly scaffold protein plu2622 161 COG0316 IscA, Uncharacterized conserved protein Function unknown 37525286 Common - hypothetical protein plu1320 167 COG0583 LysR, Transcriptional regulator Transcription 37525523 Pathogen cipA Crystalline inclusion protein CipA plu1576 1 None None None 37527501 Common nadC quinolinate phosphoribosyltransferase plu3637 205 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 37524656 Common prtA Alkaline metalloprotease precursor PrtA plu0655 82 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 37527659 Pathogen - hypothetical protein plu3797 2 None None None 37525805 Common - hypothetical protein plu1881 23 COG4340 COG4340, Uncharacterized protein conserved in bacteria Function unknown 37524793 Pathogen - hypothetical protein plu0792 1 None None None 37526635 Common nlpB lipoprotein plu2745 23 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 37524359 Pathogen - hypothetical protein plu0346 1 None None None 37527411 Common - diaminobutyrate--2-oxoglutarate aminotransferase plu3538 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 37528101 Common - hypothetical protein plu4269 119 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 37524481 Common - hypothetical protein plu0472 182 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37528048 Pathogen - hypothetical protein plu4212 1 None None None 37525377 Common - hypothetical protein plu1423 11 None None None 37525104 Common - hypothetical protein plu1136 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37524594 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase plu0590 211 COG0196 RibF, FAD synthase Coenzyme metabolism 37526997 Common astA arginine N-succinyltransferase (AOST) plu3109 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 37528639 Common - hypothetical protein plu4830 107 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 37526018 Common - hypothetical protein plu2102 54 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 37525417 Pathogen - hypothetical protein plu1465 1 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 37524282 Pathogen - hypothetical protein plu0263 2 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37524395 Common - hypothetical protein plu0384 5 None None None 37528620 Common wblK WblK protein plu4807 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 37524786 Pathogen - hypothetical protein plu0785 1 None None None 37527705 Common - hypothetical protein plu3845 11 COG3543 COG3543, Uncharacterized conserved protein Function unknown 37525168 Common nqrE Na(+)-translocating NADH-quinone reductase subunit E plu1200 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 37525710 Common ompA outer membrane protein A plu1775 137 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 37527525 Common ftsL cell division protein FtsL plu3661 27 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 37527650 Common - hypothetical protein plu3788 6 None None None 37527744 Pathogen xseB exodeoxyribonuclease VII small subunit plu3885 4 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 37525800 Pathogen - hypothetical protein plu1876 1 None None None 37526112 Common - hypothetical protein plu2198 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 37527237 Pathogen - hypothetical protein plu3363 2 None None None 37528671 Common walR WalR protein plu4862 226 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37526197 Common bvgS Virulence sensor protein BvgS precursor plu2284 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37528317 Pathogen - hypothetical protein plu4496 1 None None None 37528117 Common - hypothetical protein plu4286 5 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 37527321 Common - hypothetical protein plu3447 37 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 37524843 Common - hypothetical protein plu0844 11 None None None 37527147 Common ISPlu3O Transposase, IS630 family plu3266 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526508 Common sufE cysteine desufuration protein SufE plu2617 93 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 37524434 Common - hypothetical protein plu0425 49 COG2964 COG2964, Uncharacterized protein conserved in bacteria Function unknown 37524229 Common feoA ferrous iron transport protein A plu0209 29 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 37527785 Common - hypothetical protein plu3930 100 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37528201 Common zur zinc uptake transcriptional repressor plu4373 153 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 37525926 Common - hypothetical protein plu2007 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526243 Common - hypothetical protein plu2341 87 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 37526776 Pathogen - hypothetical protein plu2886 1 None None None 37527039 Common - hypothetical protein plu3152 5 None None None 37525688 Common asnC asparaginyl-tRNA synthetase plu1753 226 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 37527894 Common - hypothetical protein plu4042 127 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 37527830 Common - hypothetical protein plu3975 170 COG0344 COG0344, Predicted membrane protein Function unknown 37524134 Common - hypothetical protein plu0108 30 COG4913 COG4913, Uncharacterized protein conserved in bacteria Function unknown 37527734 Common - hypothetical protein plu3874 8 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 37528264 Common - Transposase, IS1 family plu4440 8 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 37526626 Common - hypothetical protein plu2736 175 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 37528715 Common rpmH 50S ribosomal protein L34 plu4909 194 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 37525396 Common - hypothetical protein plu1442 2 None None None 37525555 Common - hypothetical protein plu1610 8 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37528324 Common - hypothetical protein plu4503 71 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 37525888 Common - hypothetical protein plu1966 8 None None None 37524542 Pathogen - hypothetical protein plu0536 2 None None None 37528536 Common rplP 50S ribosomal protein L16 plu4719 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 37524095 Common - hypothetical protein plu0065 46 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526185 Common - hypothetical protein plu2272 23 COG5520 COG5520, O-Glycosyl hydrolase Cell envelope biogenesis, outer membrane 37526071 Common - hypothetical protein plu2155 7 None None None 37527024 Pathogen - hypothetical protein plu3137 1 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 37526845 Common - hypothetical protein plu2955 3 COG4461 LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein Function unknown 37527304 Common - hypothetical protein plu3430 7 None None None 37526164 Common - hypothetical protein plu2251 22 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37527138 Common - hypothetical protein plu3255 52 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 37525497 Common - hypothetical protein plu1550 6 None None None 37526287 Common - hypothetical protein plu2386 41 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37528429 Pathogen - hypothetical protein plu4610 2 None None None 37528400 Common hfq RNA-binding protein Hfq plu4581 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 37525112 Common - hypothetical protein plu1144 7 None None None 37526146 Common - L-allo-threonine dehydrogenase, NAD(P)-binding plu2233 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 37527806 Common - esterase YqiA plu3951 47 COG3150 COG3150, Predicted esterase General function prediction only 37527536 Common leuO leucine transcriptional activator plu3672 119 COG0583 LysR, Transcriptional regulator Transcription 37528438 Common - hypothetical protein plu4621 48 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 37525115 Common - hypothetical protein plu1147 7 None None None 37526426 Pathogen - hypothetical protein plu2534 1 None None None 37525579 Common - hypothetical protein plu1635 70 COG1434 COG1434, Uncharacterized conserved protein Function unknown 37524861 Common - hypothetical protein plu0866 33 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 37528592 Common - hypothetical protein plu4777 21 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 37525543 Common aat leucyl/phenylalanyl-tRNA--protein transferase plu1596 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 37525550 Common - recombination factor protein RarA plu1603 230 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 37528660 Common walW WalW protein plu4851 140 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37524847 Common - hypothetical protein plu0848 185 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 37528186 Common alr alanine racemase plu4358 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 37525308 Common - hypothetical protein plu1350 2 None None None 37528126 Pathogen - hypothetical protein plu4295 6 COG5302 COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid General function prediction only 37524256 Common glnA glutamine synthetase plu0237 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 37525626 Common - hypothetical protein plu1688 42 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37527284 Common ISPlu7B_orf Transposase, IS5 ssgr, IS427 family plu3410 63 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528555 Common - DNA-binding transcriptional repressor FabR plu4738 41 COG1309 AcrR, Transcriptional regulator Transcription 37524994 Common - hypothetical protein plu1004 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37525603 Pathogen - hypothetical protein plu1662 1 None None None 37526632 Common - hypothetical protein plu2742 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37524664 Common syd SecY interacting protein Syd plu0663 19 None None None 37527618 Pathogen - hypothetical protein plu3756 5 COG5613 COG5613, Uncharacterized conserved protein Function unknown 37525156 Common - hypothetical protein plu1188 33 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 37525642 Common - hypothetical protein plu1704 15 None None None 37528276 Common - hypothetical protein plu4453 175 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 37525962 Common - hypothetical protein plu2045 11 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 37524104 Common - hypothetical protein plu0078 6 None None None 37526395 Common - hypothetical protein plu2503 87 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 37526871 Common cobC Alpha-ribazole-5'-phosphate phosphatase plu2981 172 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 37527811 Common - hypothetical protein plu3956 20 COG5463 COG5463, Predicted integral membrane protein Function unknown 37524205 Common cpmB CpmB protein involved in carbapenem biosynthesis plu0183 160 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 37526020 Common - hypothetical protein plu2104 22 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 37525246 Common - hypothetical protein plu1279 88 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 37528071 Pathogen - hypothetical protein plu4238 5 None None None 37524647 Common - hypothetical protein plu0646 8 COG3636 COG3636, Predicted transcriptional regulator Transcription 37528194 Common - hypothetical protein plu4366 5 COG4679 COG4679, Phage-related protein Function unknown 37525142 Common - hypothetical protein plu1174 73 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 37525569 Pathogen - hypothetical protein plu1625 2 None None None 37524499 Common nfi endonuclease V plu0490 73 COG1515 Nfi, Deoxyinosine 3'endonuclease (endonuclease V) DNA replication, recombination, and repair 37528608 Common cpxA two-component sensor protein plu4795 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37524198 Common uxaC glucuronate isomerase plu0176 59 COG1904 UxaC, Glucuronate isomerase Carbohydrate transport and metabolism 37525299 Common rtxB RTX toxin ABC transporter (IM-ABC) protein RtxB plu1333 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 37528361 Common rplU 50S ribosomal protein L21 plu4542 214 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 37527608 Common - hypothetical protein plu3746 13 None None None 37524320 Common dppD dipeptide transporter ATP-binding subunit plu0303 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 37525275 Common lnt apolipoprotein N-acyltransferase plu1308 165 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 37526543 Pathogen - hypothetical protein plu2652 1 None None None 37526862 Pathogen - hypothetical protein plu2972 1 None None None 37528503 Common - hypothetical protein plu4686 190 COG0606 COG0606, Predicted ATPase with chaperone activity Posttranslational modification, protein turnover, chaperones 37528514 Common rsmB 16S rRNA methyltransferase B plu4697 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 37526905 Common - hypothetical protein plu3017 13 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 37526309 Common - hypothetical protein plu2409 5 None None None 37524868 Common folK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokina se plu0873 196 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 37524873 Pathogen cpmK CpmK protein plu0879 2 None None None 37525042 Pathogen pilU hypothetical protein plu1057 3 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37526096 Common - hypothetical protein plu2180 162 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 37525871 Common fliF flagellar MS-ring protein plu1948 127 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 37526029 Common znuB high-affinity zinc transporter membrane component plu2113 193 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 37525173 Common - hypothetical protein plu1205 13 None None None 37526212 Common - hypothetical protein plu2299 29 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37528212 Common dltA D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) plu4384 185 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37524923 Pathogen - hypothetical protein plu0931 1 None None None 37527832 Common rpsU 30S ribosomal protein S21 plu3977 153 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 37524981 Common hpcR homoprotocatechuate degradation operon regulator plu0991 76 COG1846 MarR, Transcriptional regulators Transcription 37527655 Pathogen - hypothetical protein plu3793 1 None None None 37526051 Common rnd ribonuclease D plu2135 119 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 37527683 Common - hypothetical protein plu3823 136 COG0789 SoxR, Predicted transcriptional regulators Transcription 37526960 Common - acyl-CoA thioester hydrolase YfbB plu3072 48 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37527747 Pathogen - hypothetical protein plu3888 1 None None None 37527233 Common - hypothetical protein plu3359 17 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 37528279 Common - hypothetical protein plu4458 24 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 37526883 Common cbiF Precorrin-4 C11-methyltransferase (precorrin-3-methylase) plu2993 202 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 37526809 Pathogen - hypothetical protein plu2919 1 None None None 37524820 Common - hypothetical protein plu0819 7 None None None 37525070 Pathogen - hypothetical protein plu1089 4 None None None 37524707 Common - hypothetical protein plu0706 11 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 37524722 Common miaE tRNA-(MS[2]IO[6]A)-hydroxylase plu0721 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 37528640 Common galE UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) plu4831 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 37528619 Common wblJ WblJ protein plu4806 125 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37525674 Common - hypothetical protein plu1737 7 None None None 37525817 Common - hypothetical protein plu1894 13 COG5529 COG5529, Pyocin large subunit General function prediction only 37526511 Common sufC cysteine desulfurase ATPase component plu2620 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 37525122 Pathogen - hypothetical protein plu1154 1 None None None 37526639 Common perM Putative permease perM plu2749 168 COG0628 PerM, Predicted permease General function prediction only 37527989 Common - hypothetical protein plu4144 6 COG2850 COG2850, Uncharacterized conserved protein Function unknown 37527901 Common - hypothetical protein plu4051 12 None None None 37524479 Common malP maltodextrin phosphorylase plu0470 138 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 37524833 Common agaS Putative tagatose-6-phosphate ketose/aldose isomerase plu0834 30 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 37528422 Pathogen - hypothetical protein plu4603 2 None None None 37525921 Common - hypothetical protein plu2002 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526055 Common - hypothetical protein plu2139 35 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 37524682 Common hlpA periplasmic chaperone plu0681 77 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 37526464 Pathogen - hypothetical protein plu2572 2 None None None 37528000 Pathogen - hypothetical protein plu4160 2 None None None 37524327 Common ISPlu8C Transposase, IS630 family plu0310 48 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528292 Common - hypothetical protein plu4471 17 COG3598 RepA, RecA-family ATPase DNA replication, recombination, and repair 37527245 Common ung uracil-DNA glycosylase plu3371 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 37525165 Common nqrB Na(+)-translocating NADH-quinone reductase subunit B plu1197 76 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 37525445 Common - hypothetical protein plu1494 6 None None None 37524912 Common - hypothetical protein plu0920 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37528219 Common - hypothetical protein plu4391 35 COG2234 Iap, Predicted aminopeptidases General function prediction only 37525597 Common - hypothetical protein plu1656 10 None None None 37524586 Common bglB 6-phospho-beta-glucosidase B plu0582 103 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 37528244 Common - hypothetical protein plu4416 49 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 37527640 Common sctC Type III secretion component protein SctC plu3778 140 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 37526720 Common pabC 4-amino-4-deoxychorismate lyase plu2830 140 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 37525380 Common sdhC succinate dehydrogenase cytochrome b-556 subunit plu1426 36 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 37526331 Pathogen - hypothetical protein plu2436 1 None None None 37526064 Common - hypothetical protein plu2148 28 COG3784 COG3784, Uncharacterized protein conserved in bacteria Function unknown 37524487 Common ISPlu3Z Transposase, IS630 family plu0478 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526405 Common - hypothetical protein plu2513 75 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 37526256 Pathogen - hypothetical protein plu2354 1 None None None 37527702 Common apt adenine phosphoribosyltransferase plu3842 180 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 37527406 Common - hypothetical protein plu3533 211 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37525566 Common cmk cytidylate kinase plu1621 204 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 37526860 Common eutB Ethanolamine ammonia-lyase heavy chain plu2970 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 37527790 Common - hypothetical protein plu3935 19 None None None 37527055 Common dedD hypothetical protein plu3169 61 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 37527776 Common - hypothetical protein plu3921 203 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37528546 Common bfd bacterioferritin-associated ferredoxin plu4729 21 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 37524331 Common phlA Hemolysin PhlA plu0316 59 None None None 37527511 Common - hypothetical protein plu3647 10 COG4701 COG4701, Uncharacterized protein conserved in bacteria Function unknown 37527318 Common - hypothetical protein plu3444 10 None None None 37524526 Common - hypothetical protein plu0518 64 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 37526440 Common - hypothetical protein plu2548 45 COG0583 LysR, Transcriptional regulator Transcription 37525420 Common nadA quinolinate synthetase plu1468 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 37527380 Pathogen - hypothetical protein plu3507 3 None None None 37527160 Common hscB co-chaperone HscB plu3280 55 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 37527735 Common cyoA cytochrome o ubiquinol oxidase subunit II plu3875 112 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 37525501 Common metG methionyl-tRNA synthetase plu1554 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37526793 Pathogen - hypothetical protein plu2903 1 None None None 37527404 Common - hypothetical protein plu3531 15 COG3319 COG3319, Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases Secondary metabolites biosynthesis, transport, and catabolism 37526986 Pathogen - hypothetical protein plu3098 1 None None None 37526040 Common - multidrug efflux system protein MdtI plu2124 123 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 37528082 Common rimI ribosomal-protein-alanine N-acetyltransferase plu4250 204 COG0456 RimI, Acetyltransferases General function prediction only 37524390 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A plu0379 130 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 37527816 Pathogen - hypothetical protein plu3961 1 None None None 37524425 Common - hypothetical protein plu0416 27 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37525751 Common - hypothetical protein plu1817 16 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37528652 Common ISPlu2A Transposase, IS200 family plu4843 74 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525280 Common ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase plu1313 130 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37526261 Common fumC fumarate hydratase plu2359 226 COG0114 FumC, Fumarase Energy production and conversion 37528701 Common - hypothetical protein plu4895 21 None None None 37525513 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase plu1566 215 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 37524874 Common cpmJ CpmJ protein plu0880 3 None None None 37524440 Common fusA elongation factor G plu0431 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 37524732 Pathogen - hypothetical protein plu0731 1 None None None 37528086 Pathogen - hypothetical protein plu4254 1 None None None 37525651 Pathogen - hypothetical protein plu1714 2 None None None 37527828 Common uppP undecaprenyl pyrophosphate phosphatase plu3973 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 37525053 Common - hypothetical protein plu1068 21 None None None 37527649 Common sctL type III secretion system protein plu3787 33 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 37524338 Pathogen - hypothetical protein plu0324 1 None None None 37525230 Common tyrA bifunctional chorismate mutase/prephenate dehydrogenase plu1263 81 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 37524274 Common - hypothetical protein plu0255 24 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 37527978 Common - hypothetical protein plu4133 171 COG0583 LysR, Transcriptional regulator Transcription 37524041 Common - hypothetical protein plu0009 36 COG3500 COG3500, Phage protein D General function prediction only 37526032 Common yebA hypothetical protein plu2116 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 37528468 Common wecG putative UDP-N-acetyl-D-mannosaminuronic acid transferase plu4651 110 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 37527172 Common hmpA nitric oxide dioxygenase plu3292 138 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 37524353 Common - hypothetical protein plu0340 5 None None None 37525290 Common chb Chitobiase precursor (N-acetyl-beta-glucosaminidase)-beta-N- acetylhexosaminidase) plu1324 50 COG3525 Chb, N-acetyl-beta-hexosaminidase Carbohydrate transport and metabolism 37525474 Common - hypothetical protein plu1525 192 COG0583 LysR, Transcriptional regulator Transcription 37528348 Common infB translation initiation factor IF-2 plu4529 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 37526782 Pathogen - hypothetical protein plu2892 2 None None None 37527463 Common - hypothetical protein plu3594 63 None None None 37524490 Common thiH thiamine biosynthesis protein ThiH plu0481 56 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 37527571 Pathogen - hypothetical protein plu3707 4 None None None 37524449 Common rpoC DNA-directed RNA polymerase subunit beta' plu0440 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 37525844 Common flgH flagellar basal body L-ring protein plu1921 96 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 37525038 Pathogen pilP hypothetical protein plu1053 4 None None None 37525049 Common - hypothetical protein plu1064 29 COG3636 COG3636, Predicted transcriptional regulator Transcription 37527633 Common sctR type III secretion system protein plu3771 128 COG4790 EscR, Type III secretory pathway, component EscR Intracellular trafficking and secretion 37524261 Common dtd D-tyrosyl-tRNA deacylase plu0242 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 37524700 Common - hypothetical protein plu0699 31 COG3021 COG3021, Uncharacterized protein conserved in bacteria Function unknown 37527709 Common - hypothetical protein plu3849 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 37524573 Pathogen - hypothetical protein plu0567 1 None None None 37525080 Common - hypothetical protein plu1104 9 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 37524308 Pathogen - hypothetical protein plu0290 1 None None None 37528597 Common - hypothetical protein plu4782 19 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 37527275 Common - hypothetical protein plu3401 3 None None None 37526086 Common - hypothetical protein plu2170 37 COG3376 HoxN, High-affinity nickel permease Inorganic ion transport and metabolism 37526800 Common - hypothetical protein plu2910 3 None None None 37524400 Common ppiA peptidyl-prolyl cis-trans isomerase A (rotamase A) plu0391 185 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 37526802 Common - hypothetical protein plu2912 5 None None None 37525848 Common flgL flagellar hook-associated protein FlgL plu1925 97 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 37524289 Pathogen - hypothetical protein plu0270 2 None None None 37528067 Common - hypothetical protein plu4231 7 None None None 37526775 Common - hypothetical protein plu2885 10 None None None 37526498 Common - inner membrane transport protein YdhC plu2607 166 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527783 Common - hypothetical protein plu3928 162 COG1384 LysS, Lysyl-tRNA synthetase (class I) Translation, ribosomal structure and biogenesis 37527061 Common pdxB erythronate-4-phosphate dehydrogenase plu3175 223 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 37524855 Common - hypoxanthine-guanine phosphoribosyltransferase plu0860 150 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 37526300 Pathogen - hypothetical protein plu2399 1 None None None 37527369 Pathogen - hypothetical protein plu3496 4 None None None 37528617 Common wblH WblH protein plu4804 152 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 37526602 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein plu2712 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 37527768 Common sbcD exonuclease subunit SbcD plu3912 96 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 37524552 Common - hypothetical protein plu0546 7 None None None 37528601 Common - hypothetical protein plu4788 59 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 37526005 Common - predicted lipoprotein plu2088 21 None None None 37525434 Common - hypothetical protein plu1483 9 None None None 37524640 Pathogen - hypothetical protein plu0639 1 None None None 37527761 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase plu3905 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 37524601 Common - hypothetical protein plu0599 4 None None None 37527887 Common - putative calcium/sodium:proton antiporter plu4035 106 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 37528567 Pathogen - hypothetical protein plu4750 3 None None None 37526324 Common - hypothetical protein plu2428 66 COG2956 COG2956, Predicted N-acetylglucosaminyl transferase Carbohydrate transport and metabolism 37527448 Common xerC site-specific tyrosine recombinase XerC plu3579 223 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526327 Common acnA aconitate hydratase plu2432 222 COG1048 AcnA, Aconitase A Energy production and conversion 37527975 Common efp elongation factor P plu4130 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 37527549 Pathogen - hypothetical protein plu3685 1 None None None 37525969 Pathogen - hypothetical protein plu2052 1 None None None 37528560 Common argB acetylglutamate kinase plu4743 214 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 37524135 Common - hypothetical protein plu0109 19 COG4924 COG4924, Uncharacterized protein conserved in bacteria Function unknown 37525027 Common - hypothetical protein plu1042 3 COG2253 COG2253, Uncharacterized conserved protein Function unknown 37528060 Common - hypothetical protein plu4224 139 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 37527389 Common - hypothetical protein plu3516 129 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 37524329 Common ISPlu5B Transposase, IS200 family plu0312 72 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524241 Common - hypothetical protein plu0221 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 37527477 Pathogen - hypothetical protein plu3609 1 None None None 37526481 Common sapD Peptide transport system ATP-binding protein SapD plu2590 248 COG4170 SapD, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 161579575 Common - hypoxanthine-guanine phosphoribosyltransferase plu0864 149 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 37526942 Common - hypothetical protein plu3054 53 COG0633 Fdx, Ferredoxin Energy production and conversion 37525239 Common - hypothetical protein plu1272 151 COG1042 COG1042, Acyl-CoA synthetase (NDP forming) Energy production and conversion 37525346 Common cysA sulfate/thiosulfate transporter subunit plu1390 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 37525407 Common tolB translocation protein TolB plu1455 155 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 37524956 Common tciR1 hypothetical protein plu0966 76 COG0583 LysR, Transcriptional regulator Transcription 37524737 Common - hypothetical protein plu0736 14 None None None 37524216 Common glpR DNA-binding transcriptional repressor plu0195 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 37528445 Common - hypothetical protein plu4628 125 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 37524699 Common - D,D-heptose 1,7-bisphosphate phosphatase plu0698 132 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 37527088 Common vacJ VacJ lipoprotein precursor plu3203 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 37525041 Common pilS hypothetical protein plu1056 5 None None None 37527801 Common dkgA 2,5-diketo-D-gluconate reductase A plu3946 186 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 37524620 Common tbpA thiamin transporter substrate binding subunit plu0619 62 COG4143 TbpA, ABC-type thiamine transport system, periplasmic component Coenzyme metabolism 37526838 Common - hypothetical protein plu2948 8 None None None 37525093 Common xerC site-specific tyrosine recombinase XerC plu1125 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37527355 Common - hypothetical protein plu3482 10 None None None 37526521 Common aroH phospho-2-dehydro-3-deoxyheptonate aldolase plu2630 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 37528581 Common - hypothetical protein plu4766 21 COG3074 COG3074, Uncharacterized protein conserved in bacteria Function unknown 37524079 Common atpI F0F1 ATP synthase subunit I plu0047 11 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 37527471 Common - Z-ring-associated protein plu3603 26 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 37524947 Common fba fructose-bisphosphate aldolase plu0957 171 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 37524110 Common trpS tryptophanyl-tRNA synthetase plu0084 237 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37525227 Common rplS 50S ribosomal protein L19 plu1260 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 37525881 Common putP Sodium/proline symporter (Proline permease) plu1958 184 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 37528257 Pathogen - hypothetical protein plu4431 1 None None None 37527595 Common - hypothetical protein plu3733 126 COG1609 PurR, Transcriptional regulators Transcription 37525662 Pathogen - hypothetical protein plu1725 1 None None None 37526560 Common thrS threonyl-tRNA synthetase plu2669 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37524936 Common - hypothetical protein plu0944 23 COG3423 Nlp, Predicted transcriptional regulator Transcription 37524972 Common hpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase plu0982 74 COG3836 HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Carbohydrate transport and metabolism 37525833 Common - hypothetical protein plu1910 6 None None None 37524569 Common thrA bifunctional aspartokinase I/homeserine dehydrogenase I plu0563 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 37525455 Common - hypothetical protein plu1504 136 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 37527169 Common treR trehalose repressor plu3289 126 COG1609 PurR, Transcriptional regulators Transcription 37528010 Pathogen - hypothetical protein plu4172 2 None None None 37524938 Common tktA transketolase plu0946 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 37525369 Common - hypothetical protein plu1415 5 None None None 37524819 Common - hypothetical protein plu0818 6 None None None 37524580 Common galK galactokinase plu0576 86 COG0153 GalK, Galactokinase Carbohydrate transport and metabolism 37528283 Pathogen - hypothetical protein plu4462 2 None None None 37528136 Common - hypothetical protein plu4305 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 37524456 Common - hypothetical protein plu0447 2 None None None 37528156 Common - hypothetical protein plu4326 20 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 37527992 Pathogen - hypothetical protein plu4148 1 None None None 37525703 Common - hypothetical protein plu1768 18 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 37528551 Common murI glutamate racemase plu4734 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 37525339 Common hemF coproporphyrinogen III oxidase plu1383 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 37528379 Common ISPlu3C Transposase, IS630 family plu4560 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526430 Pathogen - hypothetical protein plu2538 1 None None None 37525319 Common - hypothetical protein plu1363 18 COG1396 HipB, Predicted transcriptional regulators Transcription 37524447 Common rplL 50S ribosomal protein L7/L12 plu0438 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 37524710 Common cysD sulfate adenylyltransferase subunit 2 plu0709 138 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 37526785 Pathogen - hypothetical protein plu2895 2 None None None 37528334 Common - hypothetical protein plu4513 10 COG1709 COG1709, Predicted transcriptional regulator Transcription 37525779 Common motB flagellar motor protein MotB plu1850 112 COG1360 MotB, Flagellar motor protein Cell motility and secretion 37524249 Common hemN coproporphyrinogen III oxidase plu0230 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 37525106 Common - hypothetical protein plu1138 7 None None None 37528699 Common ISPlu1A Transposase, IS30 family plu4893 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 37527192 Pathogen - hypothetical protein plu3314 1 None None None 37524505 Common gntR repressor of gluconate (gnt) operon plu0496 127 COG1609 PurR, Transcriptional regulators Transcription 37525409 Common - hypothetical protein plu1457 101 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 37527377 Pathogen - hypothetical protein plu3504 2 None None None 37527434 Common - hypothetical protein plu3562 49 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 37528372 Common - hypothetical protein plu4553 93 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 37527539 Common leuC isopropylmalate isomerase large subunit plu3675 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 37526187 Common xylR xylose operon regulatory protein plu2274 115 COG1609 PurR, Transcriptional regulators Transcription 37525634 Pathogen - hypothetical protein plu1696 1 None None None 37526520 Common - hypothetical protein plu2629 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 37528035 Common - hypothetical protein plu4197 11 None None None 37524797 Pathogen - hypothetical protein plu0796 1 COG2236 COG2236, Predicted phosphoribosyltransferases General function prediction only 37526199 Common - hypothetical protein plu2286 2 None None None 37524043 Common - hypothetical protein plu0011 60 COG5283 COG5283, Phage-related tail protein Function unknown 37526698 Common phoQ sensor protein PhoQ plu2808 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37527945 Common livK Leucine-specific binding protein precursor LivK plu4098 144 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 37527423 Common recJ ssDNA exonuclease RecJ plu3550 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 37526241 Common - hypothetical protein plu2339 15 None None None 37524964 Common hpaC 4-hydroxyphenylacetic acid hydroxylase plu0974 105 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 37524036 Common gyrB DNA gyrase subunit B plu0004 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 37528306 Common - hypothetical protein plu4485 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 37526745 Common - putative DNA-binding transcriptional regulator plu2855 184 COG0583 LysR, Transcriptional regulator Transcription 37526577 Common - hypothetical protein plu2686 11 None None None 37525764 Pathogen - hypothetical protein plu1831 3 None None None 37526364 Pathogen - hypothetical protein plu2471 1 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 37526691 Common icd isocitrate dehydrogenase plu2801 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 37526682 Common - hypothetical protein plu2792 189 COG0583 LysR, Transcriptional regulator Transcription 37526928 Common - hypothetical protein plu3040 11 None None None 37528412 Common - hypothetical protein plu4593 24 None None None 37526608 Common - hypothetical protein plu2718 23 COG3016 PhuW, Uncharacterized iron-regulated protein Function unknown 37524060 Common - hypothetical protein plu0028 11 COG2932 COG2932, Predicted transcriptional regulator Transcription 37524753 Common - hypothetical protein plu0752 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 37526228 Common - hypothetical protein plu2320 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37526176 Common - hypothetical protein plu2263 6 None None None 37527602 Common - hypothetical protein plu3740 115 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 37526116 Common - hypothetical protein plu2202 176 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37527049 Pathogen - hypothetical protein plu3163 2 None None None 37525549 Common lolA outer-membrane lipoprotein carrier protein plu1602 70 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 37524436 Common - hypothetical protein plu0427 36 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 37527239 Common - hypothetical protein plu3365 56 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 37524959 Common tcdB2 Insecticidal toxin complex protein TcdB2 plu0969 18 None None None 37525487 Common moeA molybdopterin biosynthesis protein MoeA plu1540 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 37527586 Common abgT putative aminobenzoyl-glutamate transporter plu3724 39 COG2978 AbgT, Putative p-aminobenzoyl-glutamate transporter Coenzyme metabolism 37527125 Pathogen - hypothetical protein plu3242 5 None None None 37526910 Common - hypothetical protein plu3022 3 None None None 37528443 Common fepC Ferric enterobactin transport ATP-binding protein FepC plu4626 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 37527014 Common - hypothetical protein plu3126 126 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37528498 Common ilvA threonine dehydratase plu4681 217 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 37525865 Common fliL flagellar basal body-associated protein FliL plu1942 40 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 37525374 Common kdpA potassium-transporting ATPase subunit A plu1420 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 37527876 Common - hypothetical protein plu4024 26 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 37526652 Common speG spermidine N1-acetyltransferase (diamine acetyltransferase) plu2762 76 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 37525263 Common rodA cell wall shape-determining protein plu1296 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 37525869 Common fliH flagellar assembly protein H plu1946 43 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 37526666 Common - multidrug efflux system subunit MdtC plu2776 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 37527204 Common - hypothetical protein plu3327 16 None None None 37526154 Common - hypothetical protein plu2241 14 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 37526104 Common - hypothetical protein plu2189 22 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 37527732 Common - hypothetical protein plu3872 20 COG3056 COG3056, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 37527203 Common - hypothetical protein plu3326 17 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37525944 Common uvrC excinuclease ABC subunit C plu2027 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 37524379 Common - hypothetical protein plu0368 44 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 37524074 Common atpA F0F1 ATP synthase subunit alpha plu0042 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 37524111 Common gph phosphoglycolate phosphatase plu0085 179 COG0546 Gph, Predicted phosphatases General function prediction only 37526811 Common - hypothetical protein plu2921 16 COG1396 HipB, Predicted transcriptional regulators Transcription 37526760 Common - nucleoid-associated protein NdpA plu2870 31 COG3081 COG3081, Nucleoid-associated protein General function prediction only 37527934 Common prmA ribosomal protein L11 methyltransferase plu4087 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 37524092 Common rbsR transcriptional repressor RbsR plu0060 128 COG1609 PurR, Transcriptional regulators Transcription 37526933 Common - hypothetical protein plu3045 85 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 37525809 Common - hypothetical protein plu1885 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37525166 Common nqrC Na(+)-translocating NADH-quinone reductase subunit C plu1198 47 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 37525237 Common clpB protein disaggregation chaperone plu1270 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 37527252 Common smpB SsrA-binding protein plu3378 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 37526854 Common - hypothetical protein plu2964 137 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 37528529 Common rpsH 30S ribosomal protein S8 plu4712 245 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 37527134 Common - hypothetical protein plu3251 5 None None None 37524719 Common nlpD predicted outer membrane lipoprotein plu0718 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 37526439 Common - hypothetical protein plu2547 4 None None None 37527325 Common - hypothetical protein plu3451 3 None None None 37528520 Common rpsD 30S ribosomal protein S4 plu4703 217 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 37525897 Common - hypothetical protein plu1975 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 37525251 Common nrdF ribonucleotide-diphosphate reductase subunit beta plu1284 151 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 37525429 Common modB molybdate ABC transporter permease protein plu1477 227 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 37524792 Common - hypothetical protein plu0791 33 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37526688 Common - pteridine reductase plu2798 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37525775 Pathogen - hypothetical protein plu1844 1 None None None 37526546 Common pbgE2 PbgE2 protein plu2655 21 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 37527260 Pathogen - hypothetical protein plu3386 1 None None None 37526478 Common sapA Peptide transport periplasmic protein SapA precursor plu2587 200 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 37526192 Common ccdB Cytotoxic protein CcdB plu2279 14 None None None 37526707 Common - hypothetical protein plu2817 10 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37525204 Common - hypothetical protein plu1237 3 None None None 37526822 Pathogen - hypothetical protein plu2932 1 None None None 37524694 Common - hypothetical protein plu0693 96 COG1720 COG1720, Uncharacterized conserved protein Function unknown 37528483 Common gppA guanosine pentaphosphate phosphohydrolase plu4666 181 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 37527964 Common glpT sn-glycerol-3-phosphate transporter plu4119 67 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 37525229 Common aroF phospho-2-dehydro-3-heoxyheptonate aldolase plu1262 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 37528168 Common ISPlu6B Transposase, IS982 family plu4339 30 None None None 37524315 Pathogen - hypothetical protein plu0298 2 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 37526371 Common - hypothetical protein plu2479 14 None None None 37527638 Pathogen - hypothetical protein plu3776 3 None None None 37527345 Common - hypothetical protein plu3472 97 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 37526967 Common nuoL NADH dehydrogenase subunit L plu3079 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 37524513 Common - hypothetical protein plu0504 6 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37526077 Pathogen - hypothetical protein plu2161 1 None None None 37528501 Common ilvM acetolactate synthase 2 regulatory subunit plu4684 24 COG3978 COG3978, Acetolactate synthase (isozyme II), small (regulatory) subunit Function unknown 37527631 Pathogen sctP Type III secretion component protein SctP plu3769 5 None None None 37526204 Common - hypothetical protein plu2291 4 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 37526613 Common - hypothetical protein plu2723 33 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 37528508 Common aroE shikimate 5-dehydrogenase plu4691 193 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 37524531 Common - hypothetical protein plu0523 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 37525174 Pathogen - hypothetical protein plu1206 3 None None None 37527264 Common - hypothetical protein plu3390 2 None None None 37528462 Common hemD uroporphyrinogen-III synthase plu4645 63 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 37526536 Common - hypothetical protein plu2645 153 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37524992 Common - hypothetical protein plu1002 117 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 37526011 Common - hypothetical protein plu2094 82 COG3038 CybB, Cytochrome B561 Energy production and conversion 37525612 Pathogen - hypothetical protein plu1672 1 None None None 37527000 Pathogen - hypothetical protein plu3112 2 None None None 37524125 Common hslO Hsp33-like chaperonin plu0099 140 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 37527290 Common - hypothetical protein plu3416 8 None None None 37527652 Common cspI cold shock-like protein (CPS-I) plu3790 182 COG1278 CspC, Cold shock proteins Transcription 37526509 Common sufS selenocysteine lyase plu2618 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 37527491 Common aceE pyruvate dehydrogenase subunit E1 plu3623 149 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 37528253 Common - hypothetical protein plu4425 48 COG0730 COG0730, Predicted permeases General function prediction only 37528573 Common rpmE 50S ribosomal protein L31 plu4758 183 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 37527622 Pathogen - hypothetical protein plu3760 5 None None None 37526479 Common sapB Peptide transport system permease protein SapB plu2588 218 COG4168 SapB, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 161579577 Common dppF dipeptide transporter ATP-binding subunit plu0304 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 37526649 Common upp uracil phosphoribosyltransferase plu2759 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 37527230 Pathogen - hypothetical protein plu3356 1 None None None 37525256 Common cspE cold shock protein E plu1289 180 COG1278 CspC, Cold shock proteins Transcription 37525682 Common ISPlu4D Transposase, IS4 family plu1746 19 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37524357 Pathogen - hypothetical protein plu0344 1 None None None 37525783 Common - hypothetical protein plu1854 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 37527251 Common - hypothetical protein plu3377 102 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 37524416 Pathogen - hypothetical protein plu0407 3 None None None 37527007 Common - hypothetical protein plu3119 2 None None None 37528623 Common wblN WblN protein plu4810 24 COG2510 COG2510, Predicted membrane protein Function unknown 37527563 Common - hypothetical protein plu3699 7 None None None 37525054 Common - hypothetical protein plu1069 44 None None None 37527090 Common dctA C4-dicarboxylate transporter DctA plu3205 160 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 37526385 Common oppA2 Periplasmic-binding protein precursor OppA2 plu2493 207 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 37526637 Common gcvR glycine cleavage system transcriptional repressor plu2747 29 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 37524574 Common talB transaldolase B plu0568 183 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 37525694 Common - hypothetical protein plu1759 17 None None None 37528046 Common - hypothetical protein plu4210 8 None None None 37527415 Common prpB 2-methylisocitrate lyase plu3542 134 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 37527413 Common prpD 2-methylcitrate dehydratase plu3540 61 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 37527671 Common - hypothetical protein plu3811 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37525379 Common gltA type II citrate synthase plu1425 193 COG0372 GltA, Citrate synthase Energy production and conversion 37525525 Common sdaC Serine transporter SdaC protein plu1578 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 37525928 Common - hypothetical protein plu2009 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524884 Common - hypothetical protein plu0892 8 None None None 37525363 Common - hypothetical protein plu1409 92 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37524835 Common agaC PTS system, N-acetylgalactosamine-specific IIC component 1 (EIIC-AGA) (N-acetylgalactosamine-permease IIC component 1) plu0836 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 37526248 Common - hypothetical protein plu2346 54 COG3152 COG3152, Predicted membrane protein Function unknown 37528673 Common rpmB 50S ribosomal protein L28 plu4864 160 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 37526790 Common - hypothetical protein plu2900 19 COG3567 COG3567, Uncharacterized protein conserved in bacteria Function unknown 37526288 Common - hypothetical protein plu2387 41 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37527703 Common priC primosomal replication factor N'' plu3843 21 COG3923 PriC, Primosomal replication protein N'' DNA replication, recombination, and repair 37526453 Common dadA D-amino acid dehydrogenase small subunit plu2561 136 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 37524083 Common asnC DNA-binding transcriptional regulator AsnC plu0051 155 COG1522 Lrp, Transcriptional regulators Transcription 37524841 Common speD S-adenosylmethionine decarboxylase plu0842 30 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 37527554 Common - hypothetical protein plu3690 18 COG1396 HipB, Predicted transcriptional regulators Transcription 37527896 Common - hypothetical protein plu4044 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 37526130 Common - hypothetical protein plu2216 3 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37526110 Common - hypothetical protein plu2196 66 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 37524811 Common fbpC ferric transporter ATP-binding subunit plu0810 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 37527848 Common - hypothetical protein plu3993 107 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 37526750 Common - hypothetical protein plu2860 34 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 37526267 Common - hypothetical protein plu2365 23 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 37526291 Pathogen - hypothetical protein plu2390 1 None None None 37524062 Pathogen - hypothetical protein plu0030 1 None None None 37528395 Common - transcriptional repressor NsrR plu4576 161 COG1959 COG1959, Predicted transcriptional regulator Transcription 37524325 Common - hypothetical protein plu0308 32 COG1295 Rbn, Predicted membrane protein Function unknown 37527722 Common - queuosine biosynthesis protein QueC plu3862 175 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 37525802 Common - hypothetical protein plu1878 223 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37524352 Common vsr Very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease) (V.EcoKDcm) plu0339 70 COG3727 Vsr, DNA G:T-mismatch repair endonuclease DNA replication, recombination, and repair 37525003 Common - hypothetical protein plu1013 11 None None None 37527837 Common - hypothetical protein plu3982 43 COG2944 COG2944, Predicted transcriptional regulator Transcription 37526506 Common lpp major outer membrane lipoprotein precursor (murein-lipoprotein) plu2615 20 COG4238 COG4238, Murein lipoprotein Cell envelope biogenesis, outer membrane 37524253 Common tnpA Transposase TnpA, ISL3 family plu0234 57 COG3464 COG3464, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528165 Pathogen - hypothetical protein plu4335 1 None None None 37527759 Common yajC preprotein translocase subunit YajC plu3903 169 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 37525136 Common - hypothetical protein plu1168 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 37528354 Common hflB ATP-dependent metalloprotease plu4535 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 37527996 Common - hypothetical protein plu4154 101 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37528236 Common tatC TatABCE protein translocation system subunit plu4408 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 37526220 Common - hypothetical protein plu2309 42 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 37524762 Common - hypothetical protein plu0761 9 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 37525717 Common - hypothetical protein plu1782 5 None None None 37527457 Common xerC site-specific tyrosine recombinase XerC plu3588 223 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37528016 Common - hypothetical protein plu4178 13 COG0456 RimI, Acetyltransferases General function prediction only 37524758 Common - hypothetical protein plu0757 15 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 37527099 Common - hypothetical protein plu3216 6 COG3600 GepA, Uncharacterized phage-associated protein Function unknown 37527176 Common - hypothetical protein plu3296 136 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 37525583 Common mukB cell division protein MukB plu1639 49 COG3096 MukB, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 37524929 Common - hypothetical protein plu0937 17 None None None 37525441 Common - hypothetical protein plu1490 3 None None None 37528077 Pathogen - hypothetical protein plu4244 1 None None None 37524464 Common malM maltose regulon periplasmic protein plu0455 17 None None None 37525394 Common - hypothetical protein plu1440 123 COG0439 AccC, Biotin carboxylase Lipid metabolism 37525322 Common - hypothetical protein plu1366 4 None None None 37525506 Common - hypothetical protein plu1559 220 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 37525031 Common - hypothetical protein plu1046 22 COG3636 COG3636, Predicted transcriptional regulator Transcription 37527821 Common - hypothetical protein plu3966 21 COG4259 COG4259, Uncharacterized protein conserved in bacteria Function unknown 37527621 Pathogen - hypothetical protein plu3759 5 None None None 37528108 Pathogen - hypothetical protein plu4277 3 None None None 37525541 Common clpA ATP-dependent Clp protease ATP-binding subunit plu1594 224 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 37524312 Common glyS glycyl-tRNA synthetase subunit beta plu0294 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 37524999 Pathogen - hypothetical protein plu1009 2 None None None 37524632 Common ptrA Protease III precursor (pitrilysin) plu0631 185 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 37526561 Common - hypothetical protein plu2670 224 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37527107 Common - hypothetical protein plu3224 36 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 37526319 Common - hypothetical protein plu2423 52 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 37527727 Common lon DNA-binding ATP-dependent protease La plu3867 217 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 37527600 Common - hypothetical protein plu3738 66 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 37524381 Common - hypothetical protein plu0370 16 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 37527196 Common yfhD putative transglycosylase plu3318 129 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 37524489 Pathogen - hypothetical protein plu0480 1 None None None 37525990 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase plu2073 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 37526737 Common sbcB exonuclease I plu2847 51 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 37524689 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha plu0688 196 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 37526955 Common - hypothetical protein plu3067 13 None None None 37528178 Common uvrA excinuclease ABC subunit A plu4350 239 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 37524438 Common rpsL 30S ribosomal protein S12 plu0429 239 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 37527750 Common - hypothetical protein plu3894 31 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 37525997 Common luxD Acyl transferase plu2080 2 COG2267 PldB, Lysophospholipase Lipid metabolism 37527667 Common ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) plu3805 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 161579572 Common lipB lipoyltransferase plu1292 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 37525467 Common - hypothetical protein plu1516 5 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37524234 Common pstS phosphate transporter subunit plu0214 147 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 37527040 Common - hypothetical protein plu3154 20 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37527766 Common phoR phosphate regulon sensor protein plu3910 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 37525637 Pathogen - hypothetical protein plu1699 1 None None None 161579564 Common gltB glutamate synthase subunit alpha plu4009 204 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 37527913 Common - hypothetical protein plu4066 56 COG3164 COG3164, Predicted membrane protein Function unknown 37526990 Common - hypothetical protein plu3102 138 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37525701 Common pqiA paraquat-inducible protein A plu1766 55 COG2995 PqiA, Uncharacterized paraquat-inducible protein A Function unknown 37525588 Common ISPlu6I Transposase, IS982 family plu1646 30 None None None 37525672 Pathogen - hypothetical protein plu1735 1 None None None 37525727 Common - hypothetical protein plu1793 18 None None None 37527955 Common zntA zinc/cadmium/mercury/lead-transporting ATPase plu4108 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 161579557 Common dfp bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase plu4866 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 37525719 Common - hypothetical protein plu1784 32 COG3785 COG3785, Uncharacterized conserved protein Function unknown 37526137 Pathogen - hypothetical protein plu2223 1 None None None 37526587 Common sdaA L-serine dehydratase 1 (SDH 1) plu2696 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 37525742 Pathogen - hypothetical protein plu1808 1 None None None 37524417 Pathogen - hypothetical protein plu0408 3 None None None 37525268 Common holA DNA polymerase III subunit delta plu1301 71 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 37527984 Common dipZ thiol:disulfide interchange protein precursor plu4139 137 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 37526675 Common aroP Aromatic amino acid transport protein AroP (General aromatic amino acid permease) plu2785 178 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 37527258 Common - hypothetical protein plu3384 17 COG3299 XkdT, Uncharacterized homolog of phage Mu protein gp47 Function unknown 37526493 Common gloA lactoylglutathione lyase (methylglyoxalase) (S-D-lactolyglutathione methylglyoxal lyase) plu2602 130 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 37527487 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase plu3619 209 COG1049 AcnB, Aconitase B Energy production and conversion 37528645 Pathogen - hypothetical protein plu4836 1 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 37524158 Pathogen - hypothetical protein plu0132 1 None None None 37526281 Common rnfD electron transport complex protein RnfD plu2380 76 COG4658 RnfD, Predicted NADH:ubiquinone oxidoreductase, subunit RnfD Energy production and conversion 37526354 Common - hypothetical protein plu2461 37 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 37524611 Common ksgA dimethyladenosine transferase plu0609 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 37528285 Common - hypothetical protein plu4464 3 None None None 37528208 Common lysC aspartate kinase III plu4380 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 37527841 Common - hypothetical protein plu3986 44 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 37525216 Common recA recombinase A plu1249 224 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 37526314 Pathogen - hypothetical protein plu2416 1 None None None 37527226 Common - hypothetical protein plu3350 9 None None None 37527032 Common lsrD ABC transporter permease protein (IM) LsrD plu3145 100 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 37524258 Common - hypothetical protein plu0239 18 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 37527336 Common - hypothetical protein plu3462 39 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 37525860 Common fliQ flagellar biosynthesis protein FliQ plu1937 85 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 37525708 Common - hypothetical protein plu1773 99 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 37527033 Common lsrB ABC transporter Binding Protein (BP) LsrB plu3146 53 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 37527696 Common adk adenylate kinase plu3836 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 37526830 Pathogen - hypothetical protein plu2940 1 None None None 37525342 Common - hypothetical protein plu1386 10 None None None 37525126 Common - hypothetical protein plu1158 50 COG4227 COG4227, Antirestriction protein DNA replication, recombination, and repair 37526322 Common - translation initiation factor Sui1 plu2426 55 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 37525471 Common sseA 3-mercaptopyruvate sulfurtransferase (Rhodanese-like protein) plu1522 147 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 37528615 Pathogen wblL WblL protein plu4802 1 None None None 37526893 Pathogen - hypothetical protein plu3004 1 None None None 37524642 Pathogen - hypothetical protein plu0641 1 None None None 37525016 Common - hypothetical protein plu1031 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 37526600 Common - hypothetical protein plu2709 5 None None None 37526794 Pathogen - hypothetical protein plu2904 1 None None None 37526233 Common - hypothetical protein plu2325 16 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 37526214 Common - hypothetical protein plu2301 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 37524804 Common - serine/threonine dehydratase plu0803 209 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 37528056 Common - hypothetical protein plu4220 6 None None None 37528539 Common rpsS 30S ribosomal protein S19 plu4722 246 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 37526031 Common znuA high-affinity zinc transporter periplasmic component plu2115 158 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 37527720 Common - hypothetical protein plu3860 126 COG1522 Lrp, Transcriptional regulators Transcription 37524853 Pathogen - hypothetical protein plu0858 1 None None None 37524171 Common - beta-ketoadipyl CoA thiolase plu0146 178 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 37527820 Common - hypothetical protein plu3965 21 COG4380 COG4380, Uncharacterized protein conserved in bacteria Function unknown 37527857 Common - hypothetical protein plu4002 42 COG3107 LppC, Putative lipoprotein General function prediction only 37526944 Pathogen - hypothetical protein plu3056 2 None None None 37528363 Common - hypothetical protein plu4544 12 None None None 37525461 Common - putative DNA-binding transcriptional regulator plu1510 64 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 37526684 Common - hypothetical protein plu2794 46 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 37528134 Common pcp pyrrolidone-carboxylate peptidase plu4303 56 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 161579563 Common panF sodium/panthothenate symporter plu4086 180 COG4145 PanF, Na+/panthothenate symporter Coenzyme metabolism 37527440 Common ISPlu3K Transposase, IS630 family plu3568 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525442 Common uvrB excinuclease ABC subunit B plu1491 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 37525267 Common nadD nicotinic acid mononucleotide adenyltransferase plu1300 177 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 37526451 Common mipA MltA-interacting protein precursor plu2559 31 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 37525977 Pathogen - hypothetical protein plu2060 1 None None None 37524514 Common - hypothetical protein plu0505 34 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37525573 Common - hypothetical protein plu1629 164 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 37525025 Pathogen - hypothetical protein plu1040 1 None None None 37526885 Common cbiE cobalt-precorrin-6Y C(5)-methyltransferase plu2995 103 COG2241 CobL, Precorrin-6B methylase 1 Coenzyme metabolism 37528310 Common - hypothetical protein plu4489 23 COG3076 COG3076, Uncharacterized protein conserved in bacteria Function unknown 37527097 Common - hypothetical protein plu3214 52 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37528309 Common tccC7 Insecticidal toxin complex protein TccC7 plu4488 21 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37528545 Common bfr bacterioferritin, iron storage and detoxification protein plu4728 105 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 37524577 Common - hypothetical protein plu0571 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37525589 Common - hypothetical protein plu1648 2 COG4675 MdpB, Microcystin-dependent protein Function unknown 37524493 Common thiF thiamine biosynthesis protein ThiF plu0484 219 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 37528299 Common ampH beta-lactamase/D-alanine carboxypeptidase plu4478 105 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37525395 Common - hypothetical protein plu1441 49 COG0439 AccC, Biotin carboxylase Lipid metabolism 37524521 Common - hypothetical protein plu0512 67 COG1636 COG1636, Uncharacterized protein conserved in bacteria Function unknown 37527669 Common purE phosphoribosylaminoimidazole carboxylase catalytic subunit plu3807 232 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 37525219 Common gshA glutamate--cysteine ligase plu1252 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 37526305 Pathogen - hypothetical protein plu2405 1 None None None 37526469 Common mppA Periplasmic murein peptide-binding protein precursor plu2578 194 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 37528017 Common - hypothetical protein plu4179 53 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37526972 Common nuoG NADH dehydrogenase subunit G plu3084 185 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 37525100 Pathogen - hypothetical protein plu1132 1 None None None 37526266 Pathogen - hypothetical protein plu2364 2 None None None 37528064 Common - hypothetical protein plu4228 2 None None None 37528259 Pathogen - hypothetical protein plu4435 1 None None None 37527803 Common plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) plu3948 151 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 37527635 Common sctT Type III secretion component protein SctT plu3773 56 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 37525367 Common - hypothetical protein plu1413 196 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 37528477 Common wecB UDP-N-acetylglucosamine 2-epimerase (UDP-GlcNAc-2-epimerase) plu4660 157 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 37524971 Common hpaX 4-hydroxyphenylacetate permease plu0981 131 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 37528175 Common - hypothetical protein plu4347 18 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 37528319 Common - hypothetical protein plu4498 187 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 37525190 Common - hypothetical protein plu1223 25 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 37524292 Common rpoZ DNA-directed RNA polymerase subunit omega plu0273 110 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 37525595 Common - hypothetical protein plu1654 10 None None None 37524955 Common tcdA4 Insecticidal toxin complex protein TcdA4 plu0965 11 None None None 37525842 Common flgF Flagellar basal-body rod protein FlgF (Putative proximal rod protein) plu1919 122 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 37527399 Common - hypothetical protein plu3526 9 None None None 37524934 Common rnhA ribonuclease HI (RNase HI) (Ribonuclease H) (RNaseH) plu0942 175 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 37524191 Pathogen - hypothetical protein plu0169 1 None None None 37526188 Common xylA xylose isomerase plu2275 68 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 37527344 Common - hypothetical protein plu3471 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 37524423 Common - hypothetical protein plu0414 10 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527106 Common - hypothetical protein plu3223 17 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 37526765 Common - hypothetical protein plu2875 10 None None None 37525811 Common - hypothetical protein plu1887 13 None None None 37524567 Common creA hypothetical protein plu0561 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 37528643 Common - hypothetical protein plu4834 159 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 37525998 Common luxA Alkanal monooxygenase alpha chain (Bacterial luciferase alpha chain) plu2081 103 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 37528180 Common - hypothetical protein plu4352 147 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 37528025 Common - hypothetical protein plu4187 5 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 37526545 Common pbgE3 hypothetical protein plu2654 30 None None None 37527717 Common glnK nitrogen regulatory protein P-II 2 plu3857 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 37524317 Common dppA Periplasmic dipeptide transport protein precursor DppA plu0300 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 37527866 Pathogen - hypothetical protein plu4011 2 None None None 37524839 Pathogen - hypothetical protein plu0840 4 COG3345 GalA, Alpha-galactosidase Carbohydrate transport and metabolism 37528709 Common - hypothetical protein plu4903 60 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 37526045 Common - hypothetical protein plu2129 148 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 37525282 Common nagA N-acetylglucosamine-6-phosphate deacetylase plu1316 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 37524609 Common apaH diadenosine tetraphosphatase plu0607 110 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 37525499 Common - hypothetical protein plu1552 32 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37526383 Common oppC Oligopeptide transport system permease protein OppC plu2491 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 37528081 Common prfC peptide chain release factor 3 plu4249 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 37525876 Common fliD flagellar capping protein plu1953 95 COG1345 FliD, Flagellar capping protein Cell motility and secretion 37528668 Common walM WalM protein plu4859 55 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37524789 Pathogen - hypothetical protein plu0788 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527643 Pathogen sctF Type III secretion component protein SctF plu3781 5 None None None 37524554 Common - hypothetical protein plu0548 101 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 37527270 Pathogen - hypothetical protein plu3396 1 None None None 37526229 Common - hypothetical protein plu2321 235 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37526977 Common nuoA NADH dehydrogenase subunit A plu3089 162 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 37524602 Common - hypothetical protein plu0600 69 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 37526223 Common - hypothetical protein plu2315 93 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37527581 Common - hypothetical protein plu3718 86 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 37524363 Pathogen - hypothetical protein plu0350 1 None None None 37525518 Common - hypothetical protein plu1571 81 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37527808 Common nudF ADP-ribose pyrophosphatase NudF plu3953 104 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 37527660 Common - hypothetical protein plu3798 154 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 37528662 Common rfaQ Lipopolysaccharide core biosynthesis glycosyl transferase RfaQ plu4853 107 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 37524106 Common - hypothetical protein plu0080 32 None None None 37525349 Common ptsI phosphoenolpyruvate-protein phosphotransferase plu1393 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 37527908 Common - hypothetical protein plu4061 60 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 37528326 Common - hypothetical protein plu4505 5 COG3154 COG3154, Putative lipid carrier protein Lipid metabolism 37525327 Common pbpC penicillin-binding protein 1C plu1371 199 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 37528034 Common - hypothetical protein plu4196 19 COG4679 COG4679, Phage-related protein Function unknown 37525720 Common - hypothetical protein plu1785 95 COG1254 AcyP, Acylphosphatases Energy production and conversion 37525609 Pathogen - hypothetical protein plu1668 1 None None None 37524218 Common glpE Thiosulfate sulfurtransferase GlpE plu0197 101 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 37528388 Common ISPlu6A Transposase IS982 family plu4569 30 None None None 37524402 Common pabA para-aminobenzoate synthase component II plu0393 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 37528278 Common - hypothetical protein plu4457 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37525511 Common hisI bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein plu1564 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 37526088 Common ureB urease subunit beta plu2172 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 37525967 Common - hypothetical protein plu2050 17 COG5611 COG5611, Predicted nucleic-acid-binding protein, contains PIN domain General function prediction only 37525931 Common - hypothetical protein plu2012 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525431 Common - predicted hydrolase plu1479 129 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 37524091 Common rbsK ribokinase plu0059 178 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 37525621 Common - hypothetical protein plu1683 9 None None None 37526788 Common - hypothetical protein plu2898 19 COG3566 COG3566, Uncharacterized protein conserved in bacteria Function unknown 37528552 Common btuB vitamin B12/cobalamin outer membrane transporter plu4735 129 COG4206 BtuB, Outer membrane cobalamin receptor protein Coenzyme metabolism 37525060 Common - hypothetical protein plu1079 9 None None None 37528629 Common wblR WblR protein plu4816 5 None None None 37527854 Common - hypothetical protein plu3999 97 COG1741 COG1741, Pirin-related protein General function prediction only 37528521 Common rpsK 30S ribosomal protein S11 plu4704 248 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 37528655 Common kbl 2-amino-3-ketobutyrate coenzyme A ligase plu4846 198 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 37524144 Common - hypothetical protein plu0118 136 COG2081 COG2081, Predicted flavoproteins General function prediction only 37527781 Common - hypothetical protein plu3926 25 COG3719 Rna, Ribonuclease I Translation, ribosomal structure and biogenesis 37526499 Common cfa cyclopropane fatty acyl phospholipid synthase plu2608 137 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 37524119 Pathogen - hypothetical protein plu0093 2 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 37525019 Common - hypothetical protein plu1034 24 None None None 37525223 Common ffh signal recognition particle protein plu1256 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 37528711 Common trmE tRNA modification GTPase TrmE plu4905 234 COG0486 ThdF, Predicted GTPase General function prediction only 37526984 Common pta phosphate acetyltransferase plu3096 169 COG0280 Pta, Phosphotransacetylase Energy production and conversion 37527316 Common - hypothetical protein plu3442 24 COG4373 COG4373, Mu-like prophage FluMu protein gp28 General function prediction only 37528595 Common - hypothetical protein plu4780 26 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37528475 Common rffG dTDP-glucose 4,6-dehydratase plu4658 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 37527788 Common - hypothetical protein plu3933 15 None None None 37526987 Common ISPlu10E Transposase, IS630 family plu3099 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526279 Common rnfB electron transport complex protein RnfB plu2378 125 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 37526870 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase plu2980 119 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 37526823 Common - hypothetical protein plu2933 4 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 37525297 Common - hypothetical protein plu1331 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 37528148 Common folD bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase plu4317 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 37525294 Common fldA flavodoxin FldA plu1328 74 COG0716 FldA, Flavodoxins Energy production and conversion 37526807 Common - hypothetical protein plu2917 98 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 37526007 Common rimJ ribosomal-protein-S5-alanine N-acetyltransferase plu2090 105 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 37526054 Common minC septum formation inhibitor plu2138 99 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 37527063 Common tctE Two-component sensor kinase plu3178 213 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37528207 Common pgi glucose-6-phosphate isomerase plu4379 199 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 37526877 Common cbiP cobyric acid synthase plu2987 155 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 37524821 Pathogen - hypothetical protein plu0820 5 None None None 37524655 Common - hypothetical protein plu0654 46 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 37528091 Common - hypothetical protein plu4259 105 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 37526591 Common - hypothetical protein plu2700 16 COG4811 COG4811, Predicted membrane protein Function unknown 37527796 Common exbB Biopolymer transport protein ExbB plu3941 126 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 37527390 Common - O-acetylhomoserine aminocarboxypropyltransferase plu3517 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 37528157 Pathogen - hypothetical protein plu4327 1 None None None 37527573 Common - hypothetical protein plu3709 5 None None None 37528565 Common - hypothetical protein plu4748 3 None None None 37527367 Common - hypothetical protein plu3494 11 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37527082 Common hutI imidazolonepropionase plu3197 105 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 37528454 Common - hypothetical protein plu4637 61 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 37524583 Common dnaK molecular chaperone DnaK plu0579 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 37526415 Common - hypothetical protein plu2523 31 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37526063 Common - hypothetical protein plu2147 25 None None None 37524610 Common apaG ApaG plu0608 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 37525044 Pathogen - hypothetical protein plu1059 3 None None None 37526605 Common - hypothetical protein plu2715 45 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37527118 Common - hypothetical protein plu3235 5 None None None 37526272 Common - hypothetical protein plu2371 6 None None None 37524775 Common mrfE MrfE protein plu0774 9 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37524454 Pathogen - hypothetical protein plu0445 1 None None None 37525904 Pathogen - hypothetical protein plu1982 1 None None None 37526949 Pathogen - hypothetical protein plu3061 4 None None None 37525908 Common malH maltose-6'-phosphate glucosidase plu1988 53 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 37526965 Common nuoN NADH dehydrogenase subunit N plu3077 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 37526167 Pathogen - hypothetical protein plu2254 4 None None None 37526023 Common aspS aspartyl-tRNA synthetase plu2107 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37526868 Common - hypothetical protein plu2978 22 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37525405 Common tolR colicin uptake protein TolR plu1453 98 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 37528530 Common rpsN 30S ribosomal protein S14 plu4713 210 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 37524914 Common - hypothetical protein plu0922 12 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37528076 Common ppxB photopexin B plu4243 6 None None None 37525507 Common gnd 6-phosphogluconate dehydrogenase plu1560 188 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 37524343 Pathogen - hypothetical protein plu0329 1 None None None 37524695 Common rcsF outer membrane lipoprotein plu0694 12 None None None 37524684 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase plu0683 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 37526462 Pathogen - hypothetical protein plu2570 1 None None None 37526346 Common - hypothetical protein plu2453 41 COG5529 COG5529, Pyocin large subunit General function prediction only 37525447 Common - hypothetical protein plu1496 11 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37526254 Common - hypothetical protein plu2352 28 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 37524112 Common rpe ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) plu0086 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 37526841 Pathogen - hypothetical protein plu2951 1 None None None 37526576 Common - hypothetical protein plu2685 10 None None None 37526714 Common - hypothetical protein plu2824 15 COG3417 FlgN, Collagen-binding surface adhesin SpaP (antigen I/II family) General function prediction only 37526253 Common - hypothetical protein plu2351 76 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37525886 Common wrbA TrpR binding protein WrbA plu1964 108 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 37524080 Common gidB glucose-inhibited division protein B plu0048 203 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 37527240 Pathogen - hypothetical protein plu3366 1 COG1646 COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold General function prediction only 37526336 Pathogen - hypothetical protein plu2441 1 None None None 37528424 Pathogen - hypothetical protein plu4605 5 None None None 37528460 Common cyaA adenylate cyclase plu4643 25 COG3072 CyaA, Adenylate cyclase Nucleotide transport and metabolism 37525051 Pathogen - hypothetical protein plu1066 1 None None None 37528187 Common dnaB replicative DNA helicase plu4359 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 37525658 Pathogen - hypothetical protein plu1721 1 None None None 37524211 Pathogen cpmH CpmH protein, probably involved in carbapenem biosynthesis or resistance plu0189 2 None None None 37525241 Common - predicted methyltransferase plu1274 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 37526843 Pathogen - hypothetical protein plu2953 2 None None None 37528590 Common - hypothetical protein plu4775 215 COG4589 COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase General function prediction only 37526174 Pathogen - hypothetical protein plu2261 3 None None None 37524351 Common dcm DNA cytosine methylase plu0338 125 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 37528434 Common ISPlu5A Transposase, IS200 family plu4617 73 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525233 Common - hypothetical protein plu1266 75 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 37525600 Common - hypothetical protein plu1659 23 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37525330 Common - hypothetical protein plu1374 26 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 37526240 Common - hypothetical protein plu2338 45 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 37527488 Pathogen - hypothetical protein plu3620 1 None None None 37524476 Common - hypothetical protein plu0467 8 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37525556 Common - hypothetical protein plu1611 26 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37527025 Common - hypothetical protein plu3138 194 COG0372 GltA, Citrate synthase Energy production and conversion 37527162 Common nifU scaffold protein plu3282 151 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 37526061 Common ldhA D-lactate dehydrogenase plu2145 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 37526144 Common - hypothetical protein plu2231 11 None None None 37525076 Pathogen - hypothetical protein plu1095 2 None None None 37528269 Common fecA Iron(III) dicitrate outer membrane transporter precursor protein FecA plu4446 104 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 37524626 Pathogen - hypothetical protein plu0625 4 None None None 37527357 Pathogen - hypothetical protein plu3484 1 None None None 37527530 Common ilvI acetolactate synthase 3 catalytic subunit plu3666 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 37525141 Common - hypothetical protein plu1173 12 None None None 37527322 Common - hypothetical protein plu3448 10 None None None 37525148 Common - hypothetical protein plu1180 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 37525124 Pathogen - hypothetical protein plu1156 3 None None None 37528217 Common - hypothetical protein plu4389 3 None None None 37526655 Common - hypothetical protein plu2765 5 COG2510 COG2510, Predicted membrane protein Function unknown 37526900 Common - hypothetical protein plu3012 11 None None None 37525836 Common flgM anti-sigma28 factor FlgM plu1913 12 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 37527518 Common murG N-acetylglucosaminyl transferase plu3654 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 37525318 Common ISPlu9G Transposase, IS4 family plu1361 26 None None None 37526880 Common cbiJ cobalt-precorrin-6x reductase plu2990 77 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 37525821 Common ISPlu10G Transposase, IS630 family plu1898 57 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525628 Common - hypothetical protein plu1690 2 None None None 37528210 Common dltD DltD protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid plu4382 14 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 37527123 Common - hypothetical protein plu3240 17 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37527059 Common truA tRNA pseudouridine synthase A plu3173 234 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 37524720 Common rpoS RNA polymerase sigma factor RpoS plu0719 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 37525277 Common - hypothetical protein plu1310 165 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 37525489 Common - hypothetical protein plu1542 62 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37528196 Common - hypothetical protein plu4368 2 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 37526160 Common - hypothetical protein plu2247 130 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 37525580 Common smtA putative metallothionein SmtA plu1636 81 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 37525170 Common apbE Thiamine biosynthesis lipoprotein ApbE precursor plu1202 140 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 37525184 Common - hypothetical protein plu1216 18 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 37524336 Pathogen - hypothetical protein plu0322 1 None None None 37528602 Common - hypothetical protein plu4789 5 None None None 37525952 Common - hypothetical protein plu2035 9 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 37527145 Common - hypothetical protein plu3263 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528413 Common - hypothetical protein plu4594 18 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37526755 Common - hypothetical protein plu2865 11 None None None 37526956 Common katE catalase plu3068 125 COG0753 KatE, Catalase Inorganic ion transport and metabolism 37526446 Common ansA cytoplasmic asparaginase I plu2554 134 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 37524203 Pathogen - hypothetical protein plu0181 1 None None None 37528633 Common wblU WblU protein plu4820 6 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37526907 Common - hypothetical protein plu3019 24 COG3306 COG3306, Glycosyltransferase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 37524832 Common agaZ Putative tagatose 6-phosphate kinase agaZ plu0833 32 COG4573 GatZ, Predicted tagatose 6-phosphate kinase Carbohydrate transport and metabolism 37527008 Common - hypothetical protein plu3120 71 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37526567 Common - hypothetical protein plu2676 70 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 37524377 Common - hypothetical protein plu0366 20 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 37525114 Common - hypothetical protein plu1146 3 COG1476 COG1476, Predicted transcriptional regulators Transcription 37524662 Common - hypothetical protein plu0661 57 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 37524484 Common - hypothetical protein plu0475 139 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 37524544 Pathogen - hypothetical protein plu0538 1 None None None 37526678 Common - hypothetical protein plu2788 20 COG5472 COG5472, Predicted small integral membrane protein Function unknown 37524419 Common - hypothetical protein plu0410 145 COG0583 LysR, Transcriptional regulator Transcription 37525715 Common mgsA methylglyoxal synthase plu1780 83 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 37525911 Common fruB fructose-specific PTS IIA/HPr components plu1992 124 COG4668 MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain Carbohydrate transport and metabolism 37528580 Common menG ribonuclease activity regulator protein RraA plu4765 76 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 37525733 Common - hypothetical protein plu1799 53 COG3718 IolB, Uncharacterized enzyme involved in inositol metabolism Carbohydrate transport and metabolism 37525098 Common - hypothetical protein plu1130 6 None None None 37527282 Pathogen - hypothetical protein plu3408 1 None None None 37527729 Common clpP ATP-dependent Clp protease proteolytic subunit plu3869 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37527018 Common - hypothetical protein plu3130 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37526552 Common btuD vitamin B12-transporter ATPase plu2661 249 COG4138 BtuD, ABC-type cobalamin transport system, ATPase component Coenzyme metabolism 37524157 Common - hypothetical protein plu0131 34 COG5433 COG5433, Transposase DNA replication, recombination, and repair 37527748 Common - hypothetical protein plu3889 24 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37524038 Pathogen - hypothetical protein plu0006 5 None None None 37526334 Common sohB predicted inner membrane peptidase plu2439 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37527481 Common - hypothetical protein plu3613 61 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 37528021 Common - hypothetical protein plu4183 21 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 37528112 Common - hypothetical protein plu4281 7 COG5435 COG5435, Uncharacterized conserved protein Function unknown 37525172 Pathogen - hypothetical protein plu1204 2 None None None 37526673 Common cspC cold shock protein plu2783 182 COG1278 CspC, Cold shock proteins Transcription 37525744 Common - hypothetical protein plu1810 114 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37527254 Common - hypothetical protein plu3380 4 None None None 37528243 Common - hypothetical protein plu4415 111 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 37527498 Pathogen - hypothetical protein plu3630 1 None None None 37527755 Common ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase plu3899 215 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 37525663 Common - hypothetical protein plu1726 16 COG5110 RPN1, 26S proteasome regulatory complex component Posttranslational modification, protein turnover, chaperones 37527034 Common lsrF aldolase plu3147 73 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 37527198 Common - tRNA-specific adenosine deaminase plu3320 216 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 37528396 Common purA adenylosuccinate synthetase plu4577 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 37527410 Common - hypothetical protein plu3537 8 None None None 37524901 Common rumA 23S rRNA 5-methyluridine methyltransferase plu0909 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 37527075 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase plu3190 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 37527834 Common rpoD RNA polymerase sigma factor RpoD plu3979 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 37526293 Common - hypothetical protein plu2392 30 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524560 Common - hypothetical protein plu0554 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 37526935 Common - phosphotransfer intermediate protein in two-component regulatory system with RcsBC plu3047 182 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37526619 Common entE enterobactin synthase subunit E plu2729 221 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 37526700 Common pepT peptidase T plu2810 60 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 37525536 Common - hypothetical protein plu1589 49 COG2431 COG2431, Predicted membrane protein Function unknown 37527397 Pathogen - hypothetical protein plu3524 1 None None None 37526021 Common - hypothetical protein plu2105 29 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 37528220 Common iclR acetate operon transcriptional repressor IclR plu4392 118 COG1414 IclR, Transcriptional regulator Transcription 37527752 Common thiL thiamine monophosphate kinase plu3896 192 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 37525015 Common - hypothetical protein plu1030 105 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 37525971 Common - translation-associated GTPase plu2054 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 37525874 Common fliT flagellar biosynthesis protein FliT plu1951 14 None None None 37525010 Pathogen - hypothetical protein plu1025 3 None None None 37524225 Common - hypothetical protein plu0205 32 COG4679 COG4679, Phage-related protein Function unknown 37525982 Common - predicted inner membrane protein plu2065 10 None None None 37527698 Common - hypothetical protein plu3838 90 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37525987 Common prfA peptide chain release factor 1 plu2070 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 37526892 Common - hypothetical protein plu3003 68 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 37528351 Common secG preprotein translocase subunit SecG plu4532 125 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 37524174 Common - hypothetical protein plu0152 2 None None None 37525862 Common fliO flagellar FliO protein plu1939 37 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 37527730 Common tig trigger factor plu3870 216 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 37527575 Common ISPlu9C Transposase, IS4 Familly plu3712 26 None None None 37524280 Pathogen - hypothetical protein plu0261 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37524236 Common pstA phosphate transporter permease subunit plu0216 227 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 37524152 Common - hypothetical protein plu0126 4 None None None 37527228 Common ISPlu3M Transposase, IS630 family plu3353 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526097 Common - 4-oxalocrotonate tautomerase plu2181 11 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 37524387 Common - hypothetical protein plu0376 7 None None None 37526891 Common - hypothetical protein plu3002 28 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 37526581 Common holE DNA polymerase III subunit theta plu2690 12 None None None 37528568 Common ISPlu3B Transposase, IS630 family plu4751 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525725 Common - hypothetical protein plu1791 20 COG1203 COG1203, Predicted helicases General function prediction only 37528248 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase plu4420 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 37524988 Common - hypothetical protein plu0998 3 None None None 37528491 Common - hypothetical protein plu4674 237 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 37527175 Common - hypothetical protein plu3295 2 None None None 37526992 Common - hypothetical protein plu3104 3 None None None 37526735 Common - hypothetical protein plu2845 28 COG4679 COG4679, Phage-related protein Function unknown 37528674 Common radC DNA repair protein RadC plu4865 179 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 37527986 Pathogen - hypothetical protein plu4141 1 None None None 37524136 Common cynR DNA-binding transcriptional regulator CynR plu0110 190 COG0583 LysR, Transcriptional regulator Transcription 37527459 Common - hypothetical protein plu3590 24 COG1476 COG1476, Predicted transcriptional regulators Transcription 37525685 Common aspC aromatic amino acid aminotransferase plu1750 75 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 37527521 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase plu3657 225 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 37527880 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase plu4028 219 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 37525894 Pathogen - hypothetical protein plu1972 1 None None None 37526624 Common - hypothetical protein plu2734 172 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 37525238 Common pssA phosphatidylserine synthase plu1271 29 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 37527011 Common - hypothetical protein plu3123 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 161579566 Common fadJ multifunctional fatty acid oxidation complex subunit alpha plu3200 163 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 37528627 Common wzxB WzxB protein plu4814 33 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 37528093 Common - hypothetical protein plu4261 57 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 37525542 Common infA translation initiation factor IF-1 plu1595 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 37524269 Common - hypothetical protein plu0250 85 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 37524591 Common nhaA Na(+)/H(+) antiporter 1 (sodium/proton antiporter 1) plu0587 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 37528234 Common rfaH transcriptional activator RfaH plu4406 41 COG0250 NusG, Transcription antiterminator Transcription 37527911 Common tldD TldD protein, suppresses the inhibitory activity of the carbon storage regulator (CSRA) plu4064 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 37528312 Pathogen - hypothetical protein plu4491 1 None None None 37525942 Pathogen - hypothetical protein plu2025 1 None None None 37527877 Pathogen - hypothetical protein plu4025 1 None None None 37526313 Common ISPlu10F Transposase, IS630 family plu2414 57 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527999 Pathogen - hypothetical protein plu4159 1 None None None 37528661 Common rfaG Lipopolysaccharide core biosynthesis protein RfaG (Glucosyltransferase I) plu4852 205 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37525279 Common miaB tRNA-methylthiotransferase MiaB protein plu1312 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 37525924 Common - hypothetical protein plu2005 12 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525938 Common - hypothetical protein plu2021 123 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 37525705 Pathogen - hypothetical protein plu1770 1 None None None 37527708 Common - hypothetical protein plu3848 67 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 37527926 Common - hypothetical protein plu4079 230 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 37525852 Pathogen - hypothetical protein plu1929 2 None None None 37528105 Common - hypothetical protein plu4273 151 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 37527186 Common ISPlu6E Transposase, IS982 family plu3308 30 None None None 37524809 Common - hypothetical protein plu0808 29 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 37524665 Common - hypothetical protein plu0664 32 COG3098 COG3098, Uncharacterized protein conserved in bacteria Function unknown 37525587 Common - hypothetical protein plu1643 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37524441 Common tuf elongation factor Tu plu0432 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 37525648 Common - hypothetical protein plu1711 25 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37527308 Common - hypothetical protein plu3434 7 None None None 37526524 Common - hypothetical protein plu2633 40 COG3720 HemS, Putative heme degradation protein Inorganic ion transport and metabolism 37525520 Common dacC penicillin-binding protein 6 precursor (D-alanyl-D-alanine carboxypeptidase fraction C) (DD-pept (DD-carboxypeptidase) (PBP-6)idase) plu1573 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 37528625 Common wblP WblP protein plu4812 23 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 37525618 Pathogen - hypothetical protein plu1680 1 None None None 37525058 Common - hypothetical protein plu1075 50 COG4804 COG4804, Uncharacterized conserved protein Function unknown 37527330 Common - hypothetical protein plu3456 8 None None None 37525414 Pathogen - hypothetical protein plu1462 1 None None None 37527843 Common - hypothetical protein plu3988 21 COG2990 VirK, Uncharacterized protein conserved in bacteria Function unknown 37524729 Common - hypothetical protein plu0728 50 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527313 Common - hypothetical protein plu3439 18 COG5005 COG5005, Mu-like prophage protein gpG General function prediction only 37525632 Common - hypothetical protein plu1694 9 None None None 37527690 Common - putative cation:proton antiport protein plu3830 212 COG4651 RosB, Kef-type K+ transport system, predicted NAD-binding component Inorganic ion transport and metabolism 37525032 Common - hypothetical protein plu1047 6 COG4823 AbiF, Abortive infection bacteriophage resistance protein Defense mechanisms 37527179 Common ISPlu3N Transposase, IS630 family plu3300 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526377 Common tonB membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins plu2485 32 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 37527417 Common - hypothetical protein plu3544 131 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 37526013 Pathogen - hypothetical protein plu2096 2 None None None 37527057 Common accD acetyl-CoA carboxylase subunit beta plu3171 219 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 37524360 Pathogen - hypothetical protein plu0347 1 None None None 37527684 Common copA copper transporter plu3824 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 37525146 Common - hypothetical protein plu1178 101 COG0762 COG0762, Predicted integral membrane protein Function unknown 37526504 Common pykF pyruvate kinase plu2613 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 37524355 Common - hypothetical protein plu0342 4 None None None 37526828 Pathogen - hypothetical protein plu2938 1 None None None 37526247 Common - hypothetical protein plu2345 113 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 37527962 Common - hypothetical protein plu4117 22 None None None 161579559 Common dacB D-alanyl-D-alanine carboxypeptidase/endopeptidase plu4539 109 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 37525001 Common - hypothetical protein plu1011 19 COG5564 COG5564, Predicted TIM-barrel enzyme, possibly a dioxygenase General function prediction only 37525480 Common - hypothetical protein plu1532 144 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37524086 Common - hypothetical protein plu0054 66 COG0714 COG0714, MoxR-like ATPases General function prediction only 37526047 Common - hypothetical protein plu2131 44 COG2944 COG2944, Predicted transcriptional regulator Transcription 37525929 Common - hypothetical protein plu2010 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524848 Common - hypothetical protein plu0851 16 None None None 37526709 Common - hypothetical protein plu2819 27 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 37527604 Common tehB tellurite resistance protein TehB plu3742 37 COG3615 TehB, Uncharacterized protein/domain, possibly involved in tellurite resistance Inorganic ion transport and metabolism 37524528 Common deoC deoxyribose-phosphate aldolase plu0520 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 37525475 Common - hypothetical protein plu1526 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 37526641 Common - hypothetical protein plu2751 114 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 37526136 Common - hypothetical protein plu2222 56 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37526818 Common - hypothetical protein plu2928 2 None None None 37525954 Common - hypothetical protein plu2037 41 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 37527383 Common lip-1 lipase 1 precursor (triacylglycerol lipase) plu3510 38 COG5571 COG5571, Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion Cell motility and secretion 37527561 Common - hypothetical protein plu3697 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37526593 Common rrmA 23S rRNA methyltransferase A plu2702 61 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37525804 Common - hypothetical protein plu1880 236 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37527154 Common - hypothetical protein plu3274 43 COG5293 COG5293, Uncharacterized protein conserved in bacteria Function unknown 37526821 Pathogen - hypothetical protein plu2931 5 None None None 37527919 Common - hypothetical protein plu4072 153 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 37526661 Common - hypothetical protein plu2771 22 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 37524420 Common - hypothetical protein plu0411 6 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 37527968 Common ISPlu3G Transposase, IS630 family plu4123 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524957 Common tccC3 Insecticidal toxin complex protein TccC3 plu0967 32 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37524866 Common panC pantoate--beta-alanine ligase plu0871 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 37525408 Common pal peptidoglycan-associated outer membrane lipoprotein plu1456 149 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 37528467 Common yifK putative transport protein YifK plu4650 136 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 37526912 Common - hypothetical protein plu3024 7 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 37527936 Common fis DNA-binding protein Fis plu4089 97 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 37527046 Common ISPlu16A Transposase, IS630 family plu3160 58 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526345 Common - 23S rRNA pseudouridylate synthase B plu2452 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 37527326 Pathogen - hypothetical protein plu3452 1 None None None 37525756 Pathogen - hypothetical protein plu1822 2 None None None 37525068 Common - hypothetical protein plu1087 22 None None None 37526975 Common nuoC bifunctional NADH:ubiquinone oxidoreductase subunit C/D plu3087 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 37524168 Common - hypothetical protein plu0143 40 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 37525427 Pathogen - hypothetical protein plu1475 1 None None None 37527401 Common - hypothetical protein plu3528 10 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37526473 Common - hypothetical protein plu2582 42 COG3106 COG3106, Predicted ATPase General function prediction only 37528352 Common glmM phosphoglucosamine mutase plu4533 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 37528481 Common trxA thioredoxin 1 (TRX1) (TRX) plu4664 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 37525999 Common luxB Alkanal monooxygenase beta chain (luciferase beta subunit) plu2082 51 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 37528340 Common - putative two-component response-regulatory protein YehT plu4521 207 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 37527870 Common rplM 50S ribosomal protein L13 plu4015 242 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 37524827 Pathogen - hypothetical protein plu0828 1 None None None 37525133 Common - hypothetical protein plu1165 25 None None None 37524630 Pathogen ppdC Prepilin peptidase dependent protein C precursor plu0629 5 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 37525796 Pathogen - hypothetical protein plu1872 1 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 37526579 Common - hypothetical protein plu2688 54 COG2372 CopC, Uncharacterized protein, homolog of Cu resistance protein CopC General function prediction only 37527676 Common ybbP Probable ABC transporter permease protein YbbP plu3816 89 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 37525426 Common modE DNA-binding transcriptional dual regulator plu1474 62 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 37525611 Common - hypothetical protein plu1671 2 None None None 37525992 Common - hypothetical protein plu2075 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37527508 Common mutT nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP plu3644 164 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 37524260 Common - phosphatase plu0241 70 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 37524290 Pathogen - hypothetical protein plu0271 1 None None None 37528446 Common - hypothetical protein plu4629 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 37527869 Common rpsI 30S ribosomal protein S9 plu4014 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 37525009 Common - hypothetical protein plu1024 138 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526421 Common - hypothetical protein plu2529 44 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37528488 Common - hypothetical protein plu4671 83 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 37524220 Common - gluconate periplasmic binding protein plu0199 162 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 37525332 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase plu1376 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 37527953 Common - hypothetical protein plu4106 15 COG3776 COG3776, Predicted membrane protein Function unknown 37526669 Common - hypothetical protein plu2779 26 COG3422 COG3422, Uncharacterized conserved protein Function unknown 37527583 Common - hypothetical protein plu3720 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526441 Common xthA exonuclease III plu2549 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 37524897 Common btuF vitamin B12-transporter protein BtuF plu0905 149 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 37526970 Common nuoI NADH dehydrogenase subunit I plu3082 193 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 37527624 Pathogen sctY Type III secretion protein SctY plu3762 4 None None None 37524076 Common atpF F0F1 ATP synthase subunit B plu0044 147 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 37525773 Common - hypothetical protein plu1842 182 COG1278 CspC, Cold shock proteins Transcription 37525527 Pathogen - hypothetical protein plu1580 1 None None None 37527449 Common - hypothetical protein plu3580 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37526206 Common - hypothetical protein plu2293 22 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37528281 Common - hypothetical protein plu4460 100 COG0582 XerC, Integrase DNA replication, recombination, and repair 37527103 Common - hypothetical protein plu3220 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527372 Common - hypothetical protein plu3499 75 COG0789 SoxR, Predicted transcriptional regulators Transcription 37526193 Common - hypothetical protein plu2280 42 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 37525459 Common ybhF ABC transporter ATP-binding protein YbhF plu1508 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 37526926 Common - hypothetical protein plu3038 6 None None None 37526534 Common - hypothetical protein plu2643 104 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525347 Common cysM cysteine synthase B plu1391 230 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 37527388 Common - hypothetical protein plu3515 5 None None None 37527218 Common lepA GTP-binding protein LepA plu3342 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 37526231 Common - hypothetical protein plu2323 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 37528123 Common - hypothetical protein plu4292 3 None None None 37525302 Common ISPlu2E Transposase, IS200 Familly plu1338 74 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527432 Common - hypothetical protein plu3560 2 None None None 37527159 Common hscA chaperone protein HscA plu3279 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 37524257 Common typA GTPase plu0238 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 37524188 Common - hypothetical protein plu0166 139 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37528223 Common aceA isocitrate lyase plu4395 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 37524751 Common - hypothetical protein plu0750 24 None None None 37525088 Pathogen - hypothetical protein plu1120 2 None None None 37525189 Common ISPlu13C Transposase, IS110 Familly plu1222 94 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527194 Common - hypothetical protein plu3316 3 None None None 37526033 Common msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase plu2117 71 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 37526783 Pathogen - hypothetical protein plu2893 2 None None None 37527299 Common - hypothetical protein plu3425 7 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37528693 Common fdhD formate dehydrogenase accessory protein plu4885 133 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 37526102 Common - hypothetical protein plu2186 215 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37524052 Common - hypothetical protein plu0020 8 COG4675 MdpB, Microcystin-dependent protein Function unknown 37528004 Pathogen - hypothetical protein plu4165 3 None None None 37526428 Common - hypothetical protein plu2536 46 COG2944 COG2944, Predicted transcriptional regulator Transcription 37527429 Common - putative global regulator plu3556 85 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 37525593 Pathogen - hypothetical protein plu1652 1 None None None 37525652 Pathogen - hypothetical protein plu1715 1 None None None 37524533 Common - hypothetical protein plu0525 54 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 37524716 Common truD tRNA pseudouridine synthase D plu0715 86 COG0585 COG0585, Uncharacterized conserved protein Function unknown 37526855 Common - hypothetical protein plu2965 148 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 37528575 Common cytR DNA-binding transcriptional regulator CytR plu4760 129 COG1609 PurR, Transcriptional regulators Transcription 37524987 Common phfS hypothetical protein plu0997 18 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37525206 Common dinP DNA polymerase IV plu1239 184 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 37528359 Common obgE GTPase ObgE plu4540 249 COG0536 Obg, Predicted GTPase General function prediction only 37525039 Common pilQ hypothetical protein plu1054 190 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 37524181 Common - hypothetical protein plu0159 7 COG3239 DesA, Fatty acid desaturase Lipid metabolism 37524046 Common - hypothetical protein plu0014 30 COG3498 COG3498, Phage tail tube protein FII General function prediction only 37524462 Common - hypothetical protein plu0453 11 COG2253 COG2253, Uncharacterized conserved protein Function unknown 37525265 Common - hypothetical protein plu1298 164 COG1576 COG1576, Uncharacterized conserved protein Function unknown 37527422 Common prfB peptide chain release factor 2 plu3549 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 37525258 Common lipA lipoyl synthase plu1291 191 COG0320 LipA, Lipoate synthase Coenzyme metabolism 37526308 Common - hypothetical protein plu2408 166 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528570 Common metL bifunctional aspartate kinase II/homoserine dehydrogenase II plu4755 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 37528504 Common - hypothetical protein plu4687 23 COG3085 COG3085, Uncharacterized protein conserved in bacteria Function unknown 37527182 Common - hypothetical protein plu3303 3 None None None 37527943 Common livM leucine/isoleucine/valine transporter permease subunit plu4096 129 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 37528099 Common - hypothetical protein plu4267 16 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 37527139 Pathogen - hypothetical protein plu3256 3 None None None 37524963 Common - inner membrane transporter YhiP plu0973 86 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 37528636 Common wblX WblX protein plu4823 124 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 37526742 Common - hypothetical protein plu2852 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 37527062 Common - hypothetical protein plu3177 157 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 37525109 Pathogen - hypothetical protein plu1141 1 None None None 37524243 Pathogen - hypothetical protein plu0223 1 None None None 37525192 Common ISPlu13B Transposase, IS110 Familly plu1225 94 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526286 Common - hypothetical protein plu2385 21 None None None 37527450 Common - hypothetical protein plu3581 24 COG1476 COG1476, Predicted transcriptional regulators Transcription 37525473 Common dinG ATP-dependent DNA helicase DinG plu1524 120 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 37527612 Common - hypothetical protein plu3750 225 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37527656 Pathogen - hypothetical protein plu3794 2 None None None 37524746 Common - hypothetical protein plu0745 74 COG1203 COG1203, Predicted helicases General function prediction only 37526165 Common - hypothetical protein plu2252 18 COG1598 COG1598, Uncharacterized conserved protein Function unknown 37528336 Common - hypothetical protein plu4515 112 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 37526696 Common purB adenylosuccinate lyase plu2806 235 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 37526792 Common - hypothetical protein plu2902 4 None None None 37526612 Common dapE succinyl-diaminopimelate desuccinylase plu2722 217 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 37528163 Common - hypothetical protein plu4333 106 COG0627 COG0627, Predicted esterase General function prediction only 37525857 Pathogen - hypothetical protein plu1934 1 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 37524064 Common - hypothetical protein plu0032 11 None None None 37528689 Pathogen - hypothetical protein plu4881 1 None None None 37526109 Pathogen - hypothetical protein plu2195 1 None None None 37524163 Common - hypothetical protein plu0137 61 COG3943 COG3943, Virulence protein General function prediction only 37524069 Common glmS D-fructose-6-phosphate amidotransferase plu0037 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 37525765 Pathogen - hypothetical protein plu1832 1 None None None 37526114 Common - hypothetical protein plu2200 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 37527306 Common - hypothetical protein plu3432 49 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37527047 Pathogen - hypothetical protein plu3161 1 None None None 37525516 Common hisD histidinol dehydrogenase plu1569 236 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 37526407 Pathogen - hypothetical protein plu2515 2 None None None 37527164 Common - DNA-binding transcriptional repressor plu3284 175 COG1959 COG1959, Predicted transcriptional regulator Transcription 37524089 Common rbsC ribose ABC transporter permease protein plu0057 117 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 37527149 Common ISPlu10D Transposase, IS630 family plu3269 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525933 Common - hypothetical protein plu2015 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526979 Common - aminotransferase AlaT plu3091 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 37527672 Common - riboflavin synthase subunit alpha plu3812 208 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 37526227 Common - hypothetical protein plu2319 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37524878 Common - hypothetical protein plu0884 13 COG5529 COG5529, Pyocin large subunit General function prediction only 37526946 Common - hypothetical protein plu3058 29 COG4691 StbC, Plasmid stability protein General function prediction only 37527540 Common leuD isopropylmalate isomerase small subunit plu3676 209 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 37527004 Pathogen - hypothetical protein plu3116 2 None None None 37527236 Common - hypothetical protein plu3362 55 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 37527715 Common tesB acyl-CoA thioesterase II (TEII) plu3855 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 37524403 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein plu0394 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 37528370 Common ppa inorganic pyrophosphatase plu4551 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 37525916 Common php predicted hydrolase plu1997 35 COG1735 Php, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 37524301 Common - hypothetical protein plu0283 32 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37526043 Common - hypothetical protein plu2127 15 COG1476 COG1476, Predicted transcriptional regulators Transcription 37524193 Common uxuR Uxu operon transcriptional regulator plu0171 117 COG2186 FadR, Transcriptional regulators Transcription 37527591 Common - hypothetical protein plu3729 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524300 Pathogen - hypothetical protein plu0282 1 None None None 37526068 Common - hypothetical protein plu2152 6 None None None 37527206 Common - hypothetical protein plu3329 8 None None None 37524736 Common - hypothetical protein plu0735 15 None None None 37528543 Common rplC 50S ribosomal protein L3 plu4726 231 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 37524185 Pathogen - hypothetical protein plu0163 1 None None None 37526418 Pathogen - hypothetical protein plu2526 1 None None None 37528532 Common rplX 50S ribosomal protein L24 plu4715 211 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 37526392 Common - hypothetical protein plu2500 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 37526951 Pathogen - hypothetical protein plu3063 1 None None None 37527294 Common - hypothetical protein plu3420 24 COG3423 Nlp, Predicted transcriptional regulator Transcription 37527527 Common mraZ hypothetical protein plu3663 146 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 37524107 Common - hypothetical protein plu0081 63 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 37524556 Common smp hypothetical protein plu0550 17 COG3726 AhpA, Uncharacterized membrane protein affecting hemolysin expression General function prediction only 37525840 Common flgD flagellar basal body rod modification protein plu1917 97 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 37527906 Pathogen - hypothetical protein plu4059 1 None None None 37528386 Common - hypothetical protein plu4567 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 37528657 Common rfaF ADP-heptose:LPS heptosyltransferase II plu4848 105 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 37528524 Common rplO 50S ribosomal protein L15 plu4707 71 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 37524615 Common djlA Dna-J like membrane chaperone protein plu0613 57 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 37526982 Common - hypothetical protein plu3094 23 COG3092 COG3092, Uncharacterized protein conserved in bacteria Function unknown 37528036 Common - hypothetical protein plu4198 16 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 37526634 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase plu2744 205 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 37526036 Common - hypothetical protein plu2120 20 None None None 37524701 Common - hypothetical protein plu0700 184 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 37527710 Common acrR DNA-binding transcriptional repressor plu3850 106 COG1309 AcrR, Transcriptional regulator Transcription 37524978 Common hpcC 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase plu0988 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37524361 Pathogen - hypothetical protein plu0348 2 None None None 37526238 Common - hypothetical protein plu2336 25 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 37524830 Common ampC beta-lactamase plu0831 103 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37527773 Common - hypothetical protein plu3917 125 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 37527365 Common - hypothetical protein plu3492 6 None None None 37527645 Pathogen sctH Type III secretion component protein SctH plu3783 5 None None None 37526445 Common sppA protease 4 plu2553 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37525492 Common sanA hypothetical protein plu1545 46 COG2949 SanA, Uncharacterized membrane protein Function unknown 37528328 Common - hypothetical protein plu4507 45 COG1257 HMG1, Hydroxymethylglutaryl-CoA reductase Lipid metabolism 37525965 Common - hypothetical protein plu2048 2 None None None 37527503 Common hofB hypothetical protein plu3639 221 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 37528349 Common nusA transcription elongation factor NusA plu4530 224 COG0195 NusA, Transcription elongation factor Transcription 37528426 Pathogen - hypothetical protein plu4607 2 None None None 37526294 Common - hypothetical protein plu2393 24 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37527363 Common - hypothetical protein plu3490 23 COG3423 Nlp, Predicted transcriptional regulator Transcription 37527852 Common - hypothetical protein plu3997 25 COG2259 COG2259, Predicted membrane protein Function unknown 37527314 Common - hypothetical protein plu3440 28 COG2369 COG2369, Uncharacterized protein, homolog of phage Mu protein gp30 Function unknown 37526017 Common cutC copper homeostasis protein CutC plu2101 58 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 37525329 Common - hypothetical protein plu1373 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 37524285 Common - hypothetical protein plu0266 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37527351 Pathogen - hypothetical protein plu3478 1 None None None 37526558 Common rpmI 50S ribosomal protein L35 plu2667 145 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 37527472 Common - hypothetical protein plu3604 173 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 37528054 Pathogen - hypothetical protein plu4218 1 None None None 37525356 Common - hypothetical protein plu1400 42 COG3530 COG3530, Uncharacterized protein conserved in bacteria Function unknown 37526009 Common argS arginyl-tRNA synthetase plu2092 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37527343 Pathogen - hypothetical protein plu3470 2 None None None 37524139 Common - hypothetical protein plu0113 45 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37524407 Common - hypothetical protein plu0398 30 COG3089 COG3089, Uncharacterized protein conserved in bacteria Function unknown 37525365 Pathogen - hypothetical protein plu1411 3 None None None 37528205 Common ubiA 4-hydroxybenzoate octaprenyltransferase plu4377 191 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 37528127 Pathogen - hypothetical protein plu4296 4 None None None 37526565 Common yfeC Chelated iron transport system membrane protein YfeC plu2674 192 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 37524508 Common - hypothetical protein plu0499 5 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 37524262 Common - hypothetical protein plu0243 53 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 37525746 Common - hypothetical protein plu1812 67 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 37524619 Common thiP thiamin transporter membrane protein plu0618 180 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 37527826 Common - putative signal transduction protein plu3971 27 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 37528448 Common - hypothetical protein plu4631 53 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 37524565 Common gpmB phosphoglycerate mutase plu0559 168 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 37524693 Common proS prolyl-tRNA synthetase plu0692 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37524925 Pathogen - hypothetical protein plu0933 1 None None None 37527885 Common - hypothetical protein plu4033 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 37524653 Common gcvA DNA-binding transcriptional activator GcvA plu0652 186 COG0583 LysR, Transcriptional regulator Transcription 37526321 Common - hypothetical protein plu2425 76 COG1309 AcrR, Transcriptional regulator Transcription 37528492 Pathogen - hypothetical protein plu4675 1 None None None 37526457 Common - hypothetical protein plu2565 9 COG3042 Hlx, Putative hemolysin General function prediction only 37527764 Common ggt gamma-glutamyltranspeptidase plu3908 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 37524208 Common cpmE CpmE protein involved in carbapenem biosynthesis plu0186 101 COG0633 Fdx, Ferredoxin Energy production and conversion 37527580 Common - hypothetical protein plu3717 9 None None None 37524571 Common thrC threonine synthase plu0565 176 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 37525677 Pathogen - hypothetical protein plu1740 4 None None None 37526832 Common - hypothetical protein plu2942 23 COG4725 IME4, Transcriptional activator, adenine-specific DNA methyltransferase Signal transduction mechanisms / Transcription 37524515 Common - hypothetical protein plu0506 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37526958 Common menC O-succinylbenzoate synthase plu3070 74 COG1441 MenC, O-succinylbenzoate synthase Coenzyme metabolism 37525273 Common gltJ Glutamate/aspartate transport system permease protein GltJ plu1306 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 37524851 Common - hypothetical protein plu0856 44 COG2850 COG2850, Uncharacterized conserved protein Function unknown 37528634 Pathogen wblV WblV protein plu4821 1 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 37525066 Common - hypothetical protein plu1085 25 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 37528132 Common - hypothetical protein plu4301 28 COG3819 COG3819, Predicted membrane protein Function unknown 37524231 Common greB transcription elongation factor GreB plu0211 202 COG0782 GreA, Transcription elongation factor Transcription 37525196 Common - hypothetical protein plu1229 17 COG3153 COG3153, Predicted acetyltransferase General function prediction only 37525972 Common pth peptidyl-tRNA hydrolase plu2055 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 37525575 Common lpxK tetraacyldisaccharide 4'-kinase plu1631 123 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 37528074 Pathogen - hypothetical protein plu4241 1 None None None 37528703 Common selA selenocysteine synthase plu4897 70 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 37524195 Common - hypothetical protein plu0173 62 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 37524430 Common - hypothetical protein plu0421 22 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 37526487 Common tyrS tyrosyl-tRNA synthetase plu2596 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37527812 Common - hypothetical protein plu3957 53 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 37528441 Common fepD Ferric enterobactin transport system permease protein FepD plu4624 188 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 37524114 Common damX hypothetical protein plu0088 24 COG3266 DamX, Uncharacterized protein conserved in bacteria Function unknown 37527897 Common ptsO phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) plu4045 111 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 37528585 Common - hypothetical protein plu4770 15 COG3152 COG3152, Predicted membrane protein Function unknown 37524299 Pathogen - hypothetical protein plu0281 1 None None None 37528015 Common - hypothetical protein plu4177 13 COG5529 COG5529, Pyocin large subunit General function prediction only 37525235 Common rluD 23S rRNA pseudouridine synthase D plu1268 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 37528612 Common wblD WblD protein plu4799 206 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 37527358 Pathogen - hypothetical protein plu3485 1 None None None 37527050 Common - hypothetical protein plu3164 101 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 37525437 Common bioF 8-amino-7-oxononanoate synthase plu1486 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 37527094 Common - hypothetical protein plu3211 49 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 37526779 Pathogen - hypothetical protein plu2889 2 None None None 37528418 Common - hypothetical protein plu4599 14 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37524787 Pathogen - hypothetical protein plu0786 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37525430 Common modC molybdate transporter ATP-binding protein plu1478 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 37527637 Common - hypothetical protein plu3775 121 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37525386 Common sucC succinyl-CoA synthetase subunit beta plu1432 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 37524977 Common hpcB 3,4-dihydroxyphenylacetate 2,3-dioxygenase plu0987 25 COG3384 COG3384, Uncharacterized conserved protein Function unknown 37528174 Common - hypothetical protein plu4346 4 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 37524213 Common - hypothetical protein plu0192 5 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 37527805 Common parE DNA topoisomerase IV subunit B plu3950 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 37527065 Common - hypothetical protein plu3180 2 None None None 37526569 Common - predicted hydrolase plu2678 182 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 37527890 Common - hypothetical protein plu4038 26 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 37524837 Common - hypothetical protein plu0838 83 COG2893 ManX, Phosphotransferase system, mannose/fructose-specific component IIA Carbohydrate transport and metabolism 37528189 Common - hypothetical protein plu4361 26 COG4933 COG4933, Uncharacterized conserved protein Function unknown 37527132 Pathogen - hypothetical protein plu3249 1 None None None 37527101 Pathogen - hypothetical protein plu3218 2 None None None 37526909 Common - hypothetical protein plu3021 25 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 37525483 Common - hypothetical protein plu1536 112 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 37524334 Common ISPlu4F Transposase, IS4 family plu0319 19 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37525243 Common emrA multidrug resistant protein A plu1276 154 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37528039 Common - hypothetical protein plu4201 34 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 37525304 Common - hypothetical protein plu1344 110 COG0657 Aes, Esterase/lipase Lipid metabolism 37525116 Common - hypothetical protein plu1148 7 None None None 37524858 Common - hypothetical protein plu0863 6 COG3600 GepA, Uncharacterized phage-associated protein Function unknown 37525951 Common - hypothetical protein plu2034 19 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37526989 Pathogen - hypothetical protein plu3101 1 None None None 37524604 Common dapB dihydrodipicolinate reductase plu0602 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 37526902 Common - hypothetical protein plu3014 5 None None None 37526615 Common - hypothetical protein plu2725 48 COG1444 COG1444, Predicted P-loop ATPase fused to an acetyltransferase General function prediction only 37524660 Common prtD Outer membrane protein PrtD plu0659 126 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 37527701 Common dnaX DNA polymerase III subunits gamma and tau plu3841 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 37525453 Common MoaE molybdopterin synthase large subunit plu1502 160 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 37526590 Common manZ mannose-specific PTS system protein IID plu2699 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 37524371 Common - hypothetical protein plu0360 21 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 37525074 Pathogen - hypothetical protein plu1093 1 None None None 37525023 Common - hypothetical protein plu1038 21 None None None 37525661 Common - hypothetical protein plu1724 9 None None None 37527532 Common - hypothetical protein plu3668 39 None None None 37524495 Common thiC thiamine biosynthesis protein ThiC plu0486 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 37528320 Common nrdD anaerobic ribonucleoside triphosphate reductase plu4499 98 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 37525823 Common - hypothetical protein plu1900 9 None None None 37527740 Common - hypothetical protein plu3880 171 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527615 Pathogen - hypothetical protein plu3753 4 None None None 37525316 Pathogen - hypothetical protein plu1358 1 None None None 37526770 Pathogen - hypothetical protein plu2880 2 None None None 37525736 Common - hypothetical protein plu1802 180 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 37526350 Common trpH Protein TrpH plu2457 112 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 37525449 Common - hypothetical protein plu1498 92 COG0391 COG0391, Uncharacterized conserved protein Function unknown 37528631 Common wblS WblS protein plu4818 4 None None None 37527447 Common ISPlu9F Transposase, IS4 Familly plu3578 26 None None None 37526573 Common prc carboxy-terminal protease plu2682 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 37528053 Pathogen - hypothetical protein plu4217 1 None None None 37526686 Common - hypothetical protein plu2796 198 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 37525696 Common ISPlu6H Transposase, IS982 family plu1761 30 None None None 37526181 Common - hypothetical protein plu2268 31 None None None 37528252 Common - hypothetical protein plu4424 88 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37526448 Common - hypothetical protein plu2556 27 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 37526887 Common cbiC precorrin-8X methylmutase plu2997 111 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 37524918 Common - hypothetical protein plu0926 148 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 37524669 Common - hypothetical protein plu0668 17 None None None 37526398 Common - hypothetical protein plu2506 36 COG1598 COG1598, Uncharacterized conserved protein Function unknown 37526657 Common - hypothetical protein plu2767 67 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 37524099 Common - hypothetical protein plu0073 50 COG3162 COG3162, Predicted membrane protein Function unknown 37526172 Common - hypothetical protein plu2259 4 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 37525182 Common - hypothetical protein plu1214 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37525403 Common - acyl-CoA thioester hydrolase YbgC plu1451 133 COG0824 FcbC, Predicted thioesterase General function prediction only 37527152 Common - hypothetical protein plu3272 7 None None None 37528225 Common metA homoserine O-succinyltransferase plu4397 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 37528114 Common - hypothetical protein plu4283 29 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 37525376 Pathogen - hypothetical protein plu1422 1 None None None 37528604 Common - hypothetical protein plu4791 13 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 37525105 Common - hypothetical protein plu1137 3 COG1476 COG1476, Predicted transcriptional regulators Transcription 37528301 Common - hypothetical protein plu4480 96 COG0795 COG0795, Predicted permeases General function prediction only 37528045 Common ISPlu9B Transposase, IS4 family plu4208 26 None None None 37527143 Common - hypothetical protein plu3261 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 37526547 Common arnT 4-amino-4-deoxy-L-arabinose transferase plu2656 84 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 37527116 Pathogen - hypothetical protein plu3233 1 None None None 37526450 Common gapA glyceraldehyde-3-phosphate dehydrogenase plu2558 219 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 37526726 Common plsX fatty acid/phospholipid synthesis protein plu2836 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 37524296 Common - hypothetical protein plu0278 21 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 37526073 Common - hypothetical protein plu2157 35 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37524146 Common uspB universal stress protein UspB plu0120 12 None None None 37525152 Common gshB glutathione synthetase plu1184 123 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 37528516 Common - hypothetical protein plu4699 19 COG3036 COG3036, Uncharacterized protein conserved in bacteria Function unknown 37524536 Pathogen - hypothetical protein plu0528 2 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 37526848 Common - hypothetical protein plu2958 11 None None None 37525292 Common - hypothetical protein plu1326 34 COG3041 COG3041, Uncharacterized protein conserved in bacteria Function unknown 37526025 Common - hypothetical protein plu2109 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 37525670 Common - Type 4 prepilin-like proteins leader peptide processing enzyme (Pectic enzyme secretion protein outO) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase ] plu1733 119 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37524817 Pathogen - hypothetical protein plu0816 1 None None None 37526083 Common pntA NAD(P) transhydrogenase subunit alpha plu2167 166 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 37526052 Common minE cell division topological specificity factor MinE plu2136 77 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 37525128 Common - hypothetical protein plu1160 12 None None None 37525530 Common - hypothetical protein plu1583 13 None None None 37526264 Common add adenosine deaminase plu2362 110 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 37526081 Common - hypothetical protein plu2165 193 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37526413 Common - hypothetical protein plu2521 10 None None None 37524773 Common mrfD MrfD protein plu0772 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37525287 Common - hypothetical protein plu1321 8 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 37525560 Common - hypothetical protein plu1615 41 COG1944 COG1944, Uncharacterized conserved protein Function unknown 37525351 Common cysK cysteine synthase A (O-acetylserine sulfhydrolase A) plu1395 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 37524823 Common - hypothetical protein plu0824 7 None None None 37528030 Common - hypothetical protein plu4192 61 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 37524916 Common - hypothetical protein plu0924 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525754 Common ISPlu6G Transposase, IS982 family plu1820 30 None None None 37524100 Common acs acetyl-CoA synthetase plu0074 215 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 37526059 Pathogen - hypothetical protein plu2143 1 None None None 37524082 Common mioC flavodoxin plu0050 75 COG0716 FldA, Flavodoxins Energy production and conversion 37527073 Common - hypothetical protein plu3188 154 COG0730 COG0730, Predicted permeases General function prediction only 37526540 Pathogen - hypothetical protein plu2649 2 None None None 37526460 Common - hypothetical protein plu2568 19 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37525989 Common - putative transcriptional regulator plu2072 49 COG2912 COG2912, Uncharacterized conserved protein Function unknown 37526357 Common trpD anthranilate phosphoribosyltransferase plu2464 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 37527794 Common - hypothetical protein plu3939 45 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 37528151 Common prrC Anticodon nuclease PrrC plu4321 19 COG4694 COG4694, Uncharacterized protein conserved in bacteria Function unknown 37528215 Common - hypothetical protein plu4387 5 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 37528558 Common argH argininosuccinate lyase plu4741 233 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 37526866 Pathogen - hypothetical protein plu2976 1 None None None 37526712 Common nagZ beta-hexosaminidase plu2822 174 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 37526422 Common - hypothetical protein plu2530 41 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37524675 Common pyrH uridylate kinase plu0674 233 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 37525884 Pathogen - hypothetical protein plu1961 3 COG2433 COG2433, Uncharacterized conserved protein Function unknown 37526963 Common - hypothetical protein plu3075 4 None None None 37526467 Pathogen - hypothetical protein plu2576 1 None None None 37528198 Common - hypothetical protein plu4370 5 None None None 37528456 Common - hypothetical protein plu4639 42 COG3159 COG3159, Uncharacterized protein conserved in bacteria Function unknown 37525393 Common - hypothetical protein plu1439 83 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 37528267 Common fecI RNA polymerase sigma factor FecI plu4444 75 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 37526974 Common nuoE NADH dehydrogenase subunit E plu3086 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 37525906 Pathogen - hypothetical protein plu1986 1 None None None 37524808 Common - hypothetical protein plu0807 13 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 37524323 Common - hypothetical protein plu0306 25 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 37524686 Common lpxB lipid-A-disaccharide synthase plu0685 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 37527242 Common - hypothetical protein plu3368 25 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 37527997 Common ISPlu2C Transposase, IS200 family plu4156 74 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525505 Common asmA putative assembly protein plu1558 47 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 37528271 Common fecC iron-dicitrate transporter permease subunit plu4448 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 37525169 Common nqrF Na(+)-translocating NADH-quinone reductase subunit F plu1201 161 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 37527392 Common - hypothetical protein plu3519 80 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37526258 Common tus DNA replication terminus site-binding protein plu2356 14 None None None 37526251 Common - hypothetical protein plu2349 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37527387 Common - hypothetical protein plu3514 13 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 37528240 Common - hypothetical protein plu4412 29 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 37525248 Common proX glycine betaine transporter periplasmic subunit plu1281 71 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 37525902 Common sgaB Putative sugar phosphotransferase component II B plu1980 29 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 37525558 Common pflB formate acetyltransferase I (pyruvate formate-lyase 1) plu1613 58 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 37528260 Pathogen - hypothetical protein plu4436 1 None None None 37525958 Common - hypothetical protein plu2041 140 COG3850 NarQ, Signal transduction histidine kinase, nitrate/nitrite-specific Signal transduction mechanisms 37526148 Common - hypothetical protein plu2235 38 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 37526597 Common - hypothetical protein plu2706 40 COG3636 COG3636, Predicted transcriptional regulator Transcription 37524998 Common - hypothetical protein plu1008 24 COG3423 Nlp, Predicted transcriptional regulator Transcription 37527221 Common rseA anti-RNA polymerase sigma factor SigE plu3345 21 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 37527692 Common - hypothetical protein plu3832 36 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37526857 Common cobD threonine-phosphate decarboxylase plu2967 226 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 161579573 Common rimM 16S rRNA-processing protein plu1258 170 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 37525179 Common - hypothetical protein plu1211 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37527922 Common accC acetyl-CoA carboxylase biotin carboxylase subunit plu4075 233 COG0439 AccC, Biotin carboxylase Lipid metabolism 37526995 Common astB succinylarginine dihydrolase plu3107 34 COG3724 AstB, Succinylarginine dihydrolase Amino acid transport and metabolism 37527332 Common - hypothetical protein plu3458 50 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 37528002 Common - hypothetical protein plu4163 67 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527879 Common - hypothetical protein plu4027 49 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 37526015 Common - hypothetical protein plu2098 31 COG2944 COG2944, Predicted transcriptional regulator Transcription 37526311 Common - hypothetical protein plu2411 126 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 37527311 Common - hypothetical protein plu3437 10 None None None 37524795 Common - hypothetical protein plu0794 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 37524784 Common - hypothetical protein plu0783 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37527223 Common nadB L-aspartate oxidase plu3347 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 37524287 Common - hypothetical protein plu0268 34 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37526797 Common - hypothetical protein plu2907 16 None None None 37526850 Common - hypothetical protein plu2960 10 None None None 37527157 Common - hypothetical protein plu3277 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 37525949 Common - hypothetical protein plu2032 84 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 37525616 Common - hypothetical protein plu1678 10 None None None 37527711 Common acrA acriflavin resistance protein A precursor plu3851 149 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 37528391 Common priB primosomal replication protein N plu4572 33 COG2965 PriB, Primosomal replication protein N DNA replication, recombination, and repair 37527567 Common ISPlu9D Transposase, IS4 family plu3703 26 None None None 37526994 Common astE succinylglutamate desuccinylase plu3106 24 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 37528518 Common rplQ 50S ribosomal protein L17 plu4701 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 37525057 Common - hypothetical protein plu1074 21 None None None 37526773 Common - hypothetical protein plu2883 29 COG3617 COG3617, Prophage antirepressor Transcription 37527686 Common - hypothetical protein plu3826 29 COG3735 COG3735, Uncharacterized protein conserved in bacteria Function unknown 37525270 Common leuS leucyl-tRNA synthetase plu1303 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37525940 Common - hypothetical protein plu2023 17 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 37524815 Common uhpB Two-component sensor histidine kinase UhpB, phosphorylates UhpA plu0814 141 COG3851 UhpB, Signal transduction histidine kinase, glucose-6-phosphate specific Signal transduction mechanisms 37525085 Common ISPlu9H Transposase, IS4 Familly plu1114 26 None None None 37525529 Pathogen - predicted inner membrane protein plu1582 3 None None None 37525698 Common - hypothetical protein plu1763 72 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 37524255 Common glnL nitrogen regulation protein NR(II) plu0236 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 37526622 Pathogen - hypothetical protein plu2732 1 None None None 37525482 Common - threonine and homoserine efflux system plu1535 87 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 37524138 Common cynS cyanate hydratase plu0112 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 37527726 Common hupB DNA-binding protein HU-beta, NS1 (HU-1) plu3866 213 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 37527867 Common sspB ClpXP protease specificity-enhancing factor plu4012 64 COG2969 SspB, Stringent starvation protein B General function prediction only 37524691 Common rof Rho-binding antiterminator plu0690 12 COG4568 Rof, Transcriptional antiterminator Transcription 37525159 Common lysA diaminopimelate decarboxylase plu1191 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 37524578 Common ISPlu6K Transposase, IS982 family plu0573 30 None None None 37526134 Pathogen - hypothetical protein plu2220 1 None None None 37526284 Common nth endonuclease III plu2383 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 37525145 Common - putative deoxyribonucleotide triphosphate pyrophosphatase plu1177 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 37525477 Common - hypothetical protein plu1529 32 COG3636 COG3636, Predicted transcriptional regulator Transcription 37525285 Common glnS glutaminyl-tRNA synthetase plu1319 244 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 37525686 Common ompN Outer membrane protein N precursor (Porin OmpN) plu1751 33 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 37527329 Common - hypothetical protein plu3455 10 COG1414 IclR, Transcriptional regulator Transcription 37525522 Pathogen - hypothetical protein plu1575 1 None None None 37525470 Common - hypothetical protein plu1519 4 None None None 37524088 Common rbsA D-ribose transporter ATP binding protein plu0056 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 37524227 Common - hypothetical protein plu0207 9 None None None 37528019 Common - hypothetical protein plu4181 19 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37524635 Common - hypothetical protein plu0634 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 37525791 Common - hypothetical protein plu1865 93 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 37528593 Common - hypothetical protein plu4778 14 COG4679 COG4679, Phage-related protein Function unknown 37528026 Common - hypothetical protein plu4188 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524748 Common - hypothetical protein plu0747 9 None None None 37525806 Common - hypothetical protein plu1882 11 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 37528344 Common pnp polynucleotide phosphorylase/polyadenylase plu4525 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 37526502 Common norM multidrug efflux protein plu2611 175 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 37527385 Common - hypothetical protein plu3512 62 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 37527419 Common ISPlu15A Transposase, ISNCY family plu3546 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37525253 Common nrdI ribonucleotide reductase stimulatory protein plu1286 36 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 37527892 Common yhbG putative ABC transporter ATP-binding protein YhbG plu4040 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 37525738 Common - hypothetical protein plu1804 173 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 37524846 Common - hypothetical protein plu0847 3 None None None 37524398 Common - hypothetical protein plu0389 23 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 37524903 Common mazG nucleoside triphosphate pyrophosphohydrolase plu0911 158 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 37524942 Common - hypothetical protein plu0950 146 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 37525713 Common - hypothetical protein plu1778 50 COG1289 COG1289, Predicted membrane protein Function unknown 37528696 Common - hypothetical protein plu4890 23 None None None 37527662 Common atoA acetate CoA-transferase beta subunit (acetyl-CoA:acetoacetate CoA transferase beta subunit) plu3800 105 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 37525731 Common - hypothetical protein plu1797 5 None None None 37527928 Common - hypothetical protein plu4081 203 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 37525103 Common xerC site-specific tyrosine recombinase XerC plu1135 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37524132 Common - hypothetical protein plu0106 18 None None None 37524413 Common - hypothetical protein plu0404 25 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37524155 Pathogen - hypothetical protein plu0129 1 None None None 37525078 Pathogen - hypothetical protein plu1097 2 None None None 37524944 Common - hypothetical protein plu0952 9 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 37528398 Common hflK FtsH protease regulator HflK plu4579 206 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 37525892 Common dsdA D-serine dehydratase plu1970 44 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 37525538 Common macB macrolide transporter ATP-binding /permease protein plu1591 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 37527036 Common ISPlu2D Transposase, IS200 family plu3149 74 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525213 Common aas 2-acyl-glycerophospho-ethanolamine acyltransferase plu1246 214 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37528250 Common - hypothetical protein plu4422 116 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 37528288 Common - hypothetical protein plu4467 23 COG4737 COG4737, Uncharacterized protein conserved in bacteria Function unknown 37527971 Common frdC fumarate reductase subunit C plu4126 23 COG3029 FrdC, Fumarate reductase subunit C Energy production and conversion 37527836 Common - hypothetical protein plu3981 28 None None None 37524593 Common rpsT 30S ribosomal protein S20 plu0589 209 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 37525464 Common - hypothetical protein plu1513 33 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 37524444 Common rplK 50S ribosomal protein L11 plu0435 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 37527917 Common mreC cell wall structural complex MreBCD transmembrane component MreC plu4070 153 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 37524385 Common - hypothetical protein plu0374 84 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 37527084 Common sixA phosphohistidine phosphatase plu3199 60 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 37527439 Common - hypothetical protein plu3567 75 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 37527215 Common era GTP-binding protein Era plu3339 233 COG1159 Era, GTPase General function prediction only 37526730 Common rluC 23S rRNA pseudouridylate synthase C plu2840 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 37524040 Common ogrK Ogr protein plu0008 9 None None None 37525245 Common - predicted inner membrane protein plu1278 8 None None None 37526733 Common - hypothetical protein plu2843 22 COG2926 COG2926, Uncharacterized protein conserved in bacteria Function unknown 37524486 Common - hypothetical protein plu0477 26 COG3506 COG3506, Uncharacterized conserved protein Function unknown 37524150 Common opdA oligopeptidase A plu0124 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 37527483 Common - hypothetical protein plu3615 194 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 37525035 Pathogen pilM hypothetical protein plu1050 4 None None None 37524546 Pathogen - hypothetical protein plu0540 2 None None None 37527506 Common - hypothetical protein plu3642 43 COG4582 COG4582, Uncharacterized protein conserved in bacteria Function unknown 37525691 Pathogen - hypothetical protein plu1756 1 None None None 37526090 Common ureE urease accessory protein plu2174 10 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 37527545 Common speA arginine decarboxylase plu3681 165 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 37527339 Common - hypothetical protein plu3465 5 None None None 37525723 Common ISPlu3V Transposase, IS630 family plu1788 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525838 Common flgB flagellar basal body rod protein FlgB plu1915 90 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 37525570 Pathogen - hypothetical protein plu1626 1 None None None 37526711 Common ndh NADH dehydrogenase plu2821 190 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 37526894 Pathogen - hypothetical protein plu3005 1 None None None 37527541 Common yabN Putative periplasmic binding protein of transport system YabN plu3677 68 COG4533 COG4533, ABC-type uncharacterized transport system, periplasmic component General function prediction only 37524628 Common ppdB hypothetical protein plu0627 16 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 37526099 Common - hypothetical protein plu2183 30 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 37525788 Common ISPlu2 Transposase, IS200 family plu1859 74 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524222 Pathogen - hypothetical protein plu0202 1 None None None 37525012 Pathogen - hypothetical protein plu1027 6 None None None 37526518 Common - predicted inner membrane protein plu2627 96 COG0628 PerM, Predicted permease General function prediction only 37525654 Common - hypothetical protein plu1717 10 None None None 37524183 Common - hypothetical protein plu0161 37 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 37527191 Common - hypothetical protein plu3313 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37525985 Common lolB outer membrane lipoprotein LolB plu2068 50 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 37528649 Common - hypothetical protein plu4840 95 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 37524985 Common phfD hypothetical protein plu0995 31 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37527460 Common - hypothetical protein plu3591 7 None None None 37526583 Common - hypothetical protein plu2692 8 None None None 37524176 Pathogen - hypothetical protein plu0154 1 None None None 37524121 Common mrcA peptidoglycan synthetase plu0095 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 37527757 Common secF preprotein translocase subunit SecF plu3901 219 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 37528331 Common - peptide synthase plu4510 210 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524952 Common tcdA1 Insecticidal toxin complex protein TcdA1 plu0962 12 None None None 37527037 Common - putative toxin YafO plu3150 5 None None None 161579568 Common - DNA replication initiation factor plu2752 177 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 37528232 Common fre FMN reductase plu4404 98 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 37524141 Pathogen - hypothetical protein plu0115 1 None None None 37524468 Common malF maltose transporter membrane protein plu0459 148 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 37526484 Pathogen - hypothetical protein plu2593 1 None None None 37525334 Common - hypothetical protein plu1378 58 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 37526671 Common fbaB fructose-bisphosphate aldolase plu2781 66 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 37528043 Pathogen - hypothetical protein plu4205 1 None None None 37527988 Common - hypothetical protein plu4143 100 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 37526924 Common - hypothetical protein plu3036 11 None None None 37524598 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase plu0594 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 37526676 Pathogen - hypothetical protein plu2786 2 None None None 37528199 Common - hypothetical protein plu4371 132 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 37525119 Pathogen - hypothetical protein plu1151 1 None None None 37524889 Common - hypothetical protein plu0897 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37525412 Common - hypothetical protein plu1460 20 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37528494 Common - hypothetical protein plu4677 10 COG2030 MaoC, Acyl dehydratase Lipid metabolism 37528357 Common greA transcription elongation factor GreA plu4538 204 COG0782 GreA, Transcription elongation factor Transcription 37524273 Common relB bifunctional antitoxin/transcriptional repressor RelB plu0254 11 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 37525544 Common cydC cysteine/glutathione ABC transporter membrane/ATP-binding component plu1597 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 37525187 Common - hypothetical protein plu1219 66 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 37524376 Common - hypothetical protein plu0365 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 37526151 Common - hypothetical protein plu2238 57 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 37524905 Common eno phosphopyruvate hydratase plu0913 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 37528691 Common - hypothetical protein plu4883 164 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 37525768 Pathogen - hypothetical protein plu1835 1 None None None 37525208 Common gpt xanthine-guanine phosphoribosyltransferase plu1241 62 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 37526781 Common - hypothetical protein plu2891 8 None None None 37528338 Common ISPlu7A_orfB Transposase, IS5 ssgr, IS427 family plu4518 63 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524589 Common - hypothetical protein plu0585 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 37526740 Common - hypothetical protein plu2850 129 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 37526236 Common - hypothetical protein plu2328 4 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 37525646 Common - hypothetical protein plu1708 21 None None None 37528314 Pathogen - hypothetical protein plu4493 1 None None None 37525854 Common - hypothetical protein plu1931 15 COG2522 COG2522, Predicted transcriptional regulator General function prediction only 37526757 Common rsuA 16S rRNA pseudouridylate synthase A plu2867 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 37527297 Common - hypothetical protein plu3423 9 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 37524478 Common malQ 4-alpha-glucanotransferase plu0469 119 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 37527341 Common - hypothetical protein plu3468 11 None None None 37526360 Common trpA tryptophan synthase subunit alpha plu2467 212 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 37527235 Common - hypothetical protein plu3361 191 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37524517 Common - hypothetical protein plu0508 6 None None None 37528115 Common - hypothetical protein plu4284 108 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37526126 Common - hypothetical protein plu2212 212 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 37524319 Common dppC dipeptide transporter plu0302 217 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 37528469 Common wzyE putative enterobacterial common antigen polymerase plu4652 13 None None None 37524054 Common - hypothetical protein plu0022 27 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 37527930 Pathogen - hypothetical protein plu4083 4 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 37526092 Common ureG urease accessory protein plu2176 136 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 37528290 Pathogen - hypothetical protein plu4469 2 None None None 37527452 Pathogen - hypothetical protein plu3583 3 None None None 37528103 Common - hypothetical protein plu4271 19 None None None 37525645 Common - hypothetical protein plu1707 43 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37526141 Common - hypothetical protein plu2227 148 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 37527427 Common - hypothetical protein plu3554 11 None None None 37528095 Common - hypothetical protein plu4263 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 37526617 Common entA 2,3-dihydroxybenzoate-2,3-dehydrogenase plu2727 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37525665 Common - hypothetical protein plu1728 44 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37528473 Common wecD TDP-fucosamine acetyltransferase plu4656 15 COG0456 RimI, Acetyltransferases General function prediction only 37524245 Common - hypothetical protein plu0225 31 None None None 37526610 Common narP Nitrate/nitrite response regulator protein NarP plu2720 207 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524432 Common slyX hypothetical protein plu0423 38 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 37527814 Common - hypothetical protein plu3959 11 COG3905 COG3905, Predicted transcriptional regulator Transcription 37528365 Common - hypothetical protein plu4546 24 COG3423 Nlp, Predicted transcriptional regulator Transcription 37528129 Common - hypothetical protein plu4298 23 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 37528682 Common - hypothetical protein plu4874 3 None None None 37527300 Common - hypothetical protein plu3426 25 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 37527941 Common livF leucine/isoleucine/valine transporter ATP-binding subunit plu4094 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 37528511 Common smf hypothetical protein plu4694 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 37527558 Pathogen - hypothetical protein plu3694 1 None None None 37524584 Common dnaJ chaperone protein DnaJ plu0580 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 37524639 Pathogen - hypothetical protein plu0638 1 None None None 37528506 Common - hypothetical protein plu4689 193 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 37526225 Common - hypothetical protein plu2317 61 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525391 Common - hypothetical protein plu1437 108 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37525419 Common - hypothetical protein plu1467 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 37527114 Common - hypothetical protein plu3231 43 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37526749 Common - hypothetical protein plu2859 55 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 37524048 Pathogen - hypothetical protein plu0016 1 None None None 37524059 Pathogen - hypothetical protein plu0027 1 None None None 37527130 Common - hypothetical protein plu3247 43 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37527899 Pathogen - hypothetical protein plu4047 1 None None None 37524173 Common - hypothetical protein plu0148 37 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 37528172 Common - hypothetical protein plu4344 44 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 37527209 Common - hypothetical protein plu3332 11 None None None 37524501 Common dbhA NA-binding protein HU-alpha (NS2) (HU-2) plu0492 212 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 37524768 Common - hypothetical protein plu0767 44 None None None 37524128 Common - hypothetical protein plu0102 215 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 37527121 Common - hypothetical protein plu3238 43 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37524961 Common tcdA5 Insecticidal toxin complex protein TcdA5 plu0971 12 None None None 37527280 Common - hypothetical protein plu3406 26 COG1783 XtmB, Phage terminase large subunit General function prediction only 37525763 Pathogen - hypothetical protein plu1830 1 None None None 37526201 Common - hypothetical protein plu2288 44 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37528179 Common - hypothetical protein plu4351 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 37526648 Common - hypothetical protein plu2758 26 COG4226 HicB, Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters Function unknown 37528680 Common - hypothetical protein plu4871 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 37528409 Common - hypothetical protein plu4590 18 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 37526038 Common zwf glucose-6-phosphate 1-dehydrogenase plu2122 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 37525813 Common - hypothetical protein plu1889 8 None None None 37527515 Common ftsQ cell division protein FtsQ plu3651 75 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 37525771 Pathogen - hypothetical protein plu1840 1 None None None 37524078 Common atpB F0F1 ATP synthase subunit A plu0046 205 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 37527279 Common - hypothetical protein plu3405 17 COG3567 COG3567, Uncharacterized protein conserved in bacteria Function unknown 37527674 Common - hypothetical protein plu3814 9 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 37526343 Common - short chain dehydrogenase plu2450 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37524166 Pathogen - hypothetical protein plu0141 3 None None None 37527496 Common - hypothetical protein plu3628 4 None None None 37524422 Pathogen - hypothetical protein plu0413 3 None None None 37525598 Common - hypothetical protein plu1657 10 None None None 37526158 Common - hypothetical protein plu2245 232 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 37527184 Common - hypothetical protein plu3306 53 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37527966 Common genX lysyl-tRNA synthetase plu4121 219 COG2269 COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 37526388 Common adhE Aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase (ADH) and acetaldehyde dehydrogenase [acetylating] (ACDH); pyruvate-formate-lyase deactivase (PFL deactivase)] plu2496 194 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 37527872 Common - cytochrome d ubiquinol oxidase subunit III plu4017 30 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 37526694 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase plu2804 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 37525163 Common - hypothetical protein plu1195 52 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 37524346 Common - hypothetical protein plu0333 3 None None None 37526000 Common luxE Acyl-protein synthetase (long-chain-fatty-acid-luciferin-component ligase) plu2083 23 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37524802 Common - hypothetical protein plu0801 29 COG5441 COG5441, Uncharacterized conserved protein Function unknown 37527200 Common ISPlu7C_orfB Transposase, IS5 ssgr, IS427 family plu3323 63 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526541 Common - hypothetical protein plu2650 46 COG3153 COG3153, Predicted acetyltransferase General function prediction only 37527269 Common - hypothetical protein plu3395 4 None None None 37525798 Common - hypothetical protein plu1874 8 None None None 37526216 Common - hypothetical protein plu2303 18 None None None 37526826 Common - hypothetical protein plu2936 14 None None None 37526381 Common oppF Oligopeptide transport ATP-binding protein OppF plu2489 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 37525458 Common ybhS ABC transporter permease protein YbhS plu1507 146 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 37527379 Common - hypothetical protein plu3506 30 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 37524996 Common - hypothetical protein plu1006 9 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 37525758 Common ISPlu1D Transposase, IS30 family plu1824 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 37527370 Common - hypothetical protein plu3497 14 None None None 37526375 Common ispZ intracellular septation protein A plu2483 91 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 37526816 Pathogen - hypothetical protein plu2926 2 None None None 37524510 Common - hypothetical protein plu0501 26 COG2845 COG2845, Uncharacterized protein conserved in bacteria Function unknown 37528577 Common hslV ATP-dependent protease peptidase subunit plu4762 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 37525741 Common - hypothetical protein plu1807 94 COG1737 RpiR, Transcriptional regulators Transcription 37527348 Pathogen - hypothetical protein plu3475 3 None None None 37526767 Common - hypothetical protein plu2877 8 None None None 37528347 Common rbfA ribosome-binding factor A plu4528 166 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 37524714 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase plu0713 189 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 37526296 Common - hypothetical protein plu2395 10 None None None 37527467 Common visC hypothetical protein plu3599 134 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37527937 Common - hypothetical protein plu4090 148 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525314 Pathogen - hypothetical protein plu1356 2 None None None 37526195 Common ISPlu1C Transposase, IS30 family plu2282 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 37525094 Common - hypothetical protein plu1126 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37524895 Common - hypothetical protein plu0903 22 None None None 37525007 Pathogen - hypothetical protein plu1022 2 None None None 37524893 Common - hypothetical protein plu0901 16 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 37524968 Pathogen - hypothetical protein plu0978 1 None None None 37526208 Common - hypothetical protein plu2295 63 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37526432 Common ISPlu7D_orfB Transposase, IS5 ssgr, IS427 family plu2540 63 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526367 Common ribA GTP cyclohydrolase II plu2474 177 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 37527216 Common rnc ribonuclease III plu3340 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 37524880 Pathogen - hypothetical protein plu0886 2 None None None 37526532 Common - hypothetical protein plu2641 183 COG0583 LysR, Transcriptional regulator Transcription 37527188 Common nadE NAD synthetase plu3310 218 COG0171 NadE, NAD synthase Coenzyme metabolism 37524865 Common panD aspartate alpha-decarboxylase plu0870 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 37526663 Common - hypothetical protein plu2773 86 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 37528676 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase plu4867 181 COG0756 Dut, dUTPase Nucleotide transport and metabolism 37527929 Common ISPlu4B Transposase, IS4 family plu4082 19 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37528375 Common - hypothetical protein plu4556 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 37524778 Pathogen mrfH MrfH protein plu0777 3 None None None 37525226 Common trmD tRNA (guanine-N(1)-)-methyltransferase plu1259 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 37527424 Common dsbC thiol:disulfide interchange protein DsbC plu3551 68 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 37524538 Pathogen - hypothetical protein plu0532 2 None None None 37524967 Common - hypothetical protein plu0977 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37525040 Common pilR hypothetical protein plu1055 16 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 37526203 Common - hypothetical protein plu2290 47 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 37526475 Common pspB phage shock protein B plu2584 22 None None None 37527263 Common - hypothetical protein plu3389 2 None None None 37525167 Common nqrD Na(+)-translocating NADH-quinone reductase subunit D plu1199 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 37526196 Pathogen - hypothetical protein plu2283 1 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37525864 Common fliM flagellar motor switch protein FliM plu1941 109 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 37526724 Common fabD acyl carrier protein S-malonyltransferase plu2834 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 161579558 Common fklB peptidyl-prolyl cis-trans isomerase plu4561 139 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 37528407 Pathogen - hypothetical protein plu4588 1 None None None 37524223 Common - hypothetical protein plu0203 16 None None None 37528472 Common wecE TDP-4-oxo-6-deoxy-D-glucose transaminase plu4655 194 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 37528507 Common - hypothetical protein plu4690 14 None None None 37528486 Common ilvY DNA-binding transcriptional regulator IlvY plu4669 180 COG0583 LysR, Transcriptional regulator Transcription 37524179 Pathogen cipB Crystalline inclusion protein CipB plu0157 1 None None None 37526922 Common - hypothetical protein plu3034 5 None None None 37524314 Common - hypothetical protein plu0297 4 None None None 37524890 Common - hypothetical protein plu0898 220 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37526155 Common - hypothetical protein plu2242 127 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 37525792 Common - hypothetical protein plu1866 65 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 37527646 Pathogen sctI Type III secretion component protein SctI plu3784 5 None None None 37525107 Common - hypothetical protein plu1139 7 None None None 37526537 Common - hypothetical protein plu2646 25 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 37528169 Common crtY hypothetical protein plu4341 17 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 37524161 Common - hypothetical protein plu0135 8 None None None 37528500 Common ilvE branched-chain amino acid aminotransferase plu4683 220 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 37524071 Common atpC F0F1 ATP synthase subunit epsilon plu0039 183 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 37526601 Common - hypothetical protein plu2710 37 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 37527939 Pathogen - hypothetical protein plu4092 1 None None None 37526436 Pathogen - hypothetical protein plu2544 1 None None None 37527267 Pathogen - hypothetical protein plu3393 1 None None None 37528085 Pathogen - hypothetical protein plu4253 1 None None None 37525160 Common fadE acyl-CoA dehydrogenase plu1192 149 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 37525776 Common flhD transcriptional activator FlhD plu1847 27 None None None 37525956 Common phoH hypothetical protein plu2039 197 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 37527484 Common - hypothetical protein plu3616 22 COG3112 COG3112, Uncharacterized protein conserved in bacteria Function unknown 37528572 Common metJ transcriptional repressor protein MetJ plu4757 23 COG3060 MetJ, Transcriptional regulator of met regulon Transcription / Amino acid transport and metabolism 37526980 Common - hypothetical protein plu3092 35 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 37526372 Common - hypothetical protein plu2480 11 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 37526614 Common - hypothetical protein plu2724 11 None None None 37525004 Common - hypothetical protein plu1015 25 COG3423 Nlp, Predicted transcriptional regulator Transcription 37526761 Common - hypothetical protein plu2871 21 COG3082 COG3082, Uncharacterized protein conserved in bacteria Function unknown 37527799 Common - hypothetical protein plu3944 21 None None None 37524818 Common - hypothetical protein plu0817 11 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37526340 Common ISPlu13A Transposase, IS110 family plu2447 94 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526665 Common - multidrug efflux system subunit MdtB plu2775 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 37526431 Pathogen - hypothetical protein plu2539 1 None None None 37526595 Common - hypothetical protein plu2704 12 None None None 37526122 Common - hypothetical protein plu2208 30 COG3384 COG3384, Uncharacterized conserved protein Function unknown 37526486 Common pdxY pyridoxamine kinase plu2595 72 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 37525151 Common - hypothetical protein plu1183 131 COG1678 COG1678, Putative transcriptional regulator Transcription 37527243 Common - hypothetical protein plu3369 54 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 37524405 Common - hypothetical protein plu0396 86 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 37526105 Common - diaminobutyrate--2-oxoglutarate aminotransferase plu2191 236 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 37525743 Common - hypothetical protein plu1809 144 COG0073 ARC1, EMAP domain General function prediction only 37526948 Common - hypothetical protein plu3060 6 None None None 37527952 Common - predicted methyltransferase plu4105 210 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 37526530 Pathogen - hypothetical protein plu2639 1 COG4278 COG4278, Uncharacterized conserved protein Function unknown 37526644 Common celA PTS system, cellobiose-specific IIB component plu2754 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 37527376 Common fic Cell filamentation protein Fic plu3503 39 COG2184 Fic, Protein involved in cell division Cell division and chromosome partitioning 37527963 Common - hypothetical protein plu4118 16 None None None 37526095 Common fnr fumarate/nitrate reduction transcriptional regulator plu2179 159 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 37526572 Common htpX heat shock protein HtpX plu2681 188 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 37527067 Common tctB TctB protein plu3182 14 None None None 37526851 Common - hypothetical protein plu2961 15 None None None 37527932 Common - hypothetical protein plu4085 20 COG3924 COG3924, Predicted membrane protein Function unknown 37525260 Common - hypothetical protein plu1293 55 COG2921 COG2921, Uncharacterized conserved protein Function unknown 37528333 Common - hypothetical protein plu4512 4 None None None 37526699 Common - hypothetical protein plu2809 55 COG2850 COG2850, Uncharacterized conserved protein Function unknown 37528685 Pathogen - hypothetical protein plu4877 1 None None None 37524065 Common - hypothetical protein plu0033 7 None None None 37527519 Common ftsW cell division protein plu3655 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 37524747 Common - hypothetical protein plu0746 18 None None None 37525028 Common - hypothetical protein plu1043 2 None None None 37524116 Common aroK shikimate kinase I plu0090 198 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 37526244 Common - hypothetical protein plu2342 194 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 37528430 Pathogen - hypothetical protein plu4611 4 None None None 37525546 Common trxB thioredoxin reductase (NADPH) plu1599 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 37525767 Common - hypothetical protein plu1834 8 None None None 37524056 Common - hypothetical protein plu0024 28 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37526929 Common paaK Phenylacetate-coenzyme A ligase (Phenylacetyl-CoA ligase) (PA-CoA ligase) plu3041 78 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37524551 Common - hypothetical protein plu0545 3 COG1476 COG1476, Predicted transcriptional regulators Transcription 37525203 Common - hypothetical protein plu1236 131 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37524711 Common cysN sulfate adenylyltransferase subunit 1 plu0710 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 37527038 Pathogen - hypothetical protein plu3151 1 None None None 37527437 Common - hypothetical protein plu3565 165 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 37524906 Pathogen - hypothetical protein plu0914 2 None None None 37524246 Common - hypothetical protein plu0226 67 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37527044 Common - hypothetical protein plu3158 29 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 37527587 Common abgB aminobenzoyl-glutamate utilization protein B plu3725 82 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 37524791 Common - hypothetical protein plu0790 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37526791 Common - hypothetical protein plu2901 27 COG1783 XtmB, Phage terminase large subunit General function prediction only 37527238 Common - hypothetical protein plu3364 62 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 37525451 Common moaC molybdenum cofactor biosynthesis protein C plu1500 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 37524780 Pathogen - hypothetical protein plu0779 1 None None None 37525424 Common - hypothetical protein plu1472 27 COG4449 COG4449, Predicted protease of the Abi (CAAX) family General function prediction only 37527353 Common ISPlu3L Transposase, IS630 family plu3480 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527166 Common suhB inositol monophosphatase plu3286 212 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 37527420 Common - hypothetical protein plu3547 169 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 37527133 Common - hypothetical protein plu3250 5 None None None 37525378 Common - putative hydrolase-oxidase plu1424 116 COG0327 COG0327, Uncharacterized conserved protein Function unknown 37526424 Pathogen - hypothetical protein plu2532 5 COG3710 CadC, DNA-binding winged-HTH domains Transcription 37525485 Common ybiT Hypothetical ABC transporter ATP-binding protein YbiT plu1538 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 37527873 Common degQ Protease precursor DegQ plu4018 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 37527225 Common srmB ATP-dependent RNA helicase SrmB plu3349 234 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 37526129 Pathogen - hypothetical protein plu2215 1 COG4076 COG4076, Predicted RNA methylase General function prediction only 37525624 Common - hypothetical protein plu1686 34 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37527616 Pathogen - hypothetical protein plu3754 1 None None None 37524154 Common - hypothetical protein plu0128 23 None None None 37526269 Pathogen - hypothetical protein plu2367 1 None None None 37527319 Common - hypothetical protein plu3445 8 None None None 37524206 Common cpmC CpmC protein involved in carbapenem biosynthesis plu0184 8 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37525336 Common engA GTP-binding protein EngA plu1380 227 COG1160 COG1160, Predicted GTPases General function prediction only 37526170 Pathogen - hypothetical protein plu2257 2 None None None 37527222 Common rpoE RNA polymerase sigma factor RpoE plu3346 172 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 37527840 Common - hypothetical protein plu3985 11 None None None 37525667 Common - hypothetical protein plu1730 20 None None None 37526586 Common - hypothetical protein plu2695 125 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 37524457 Common - hypothetical protein plu0448 237 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 37526692 Common - hypothetical protein plu2802 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 37524886 Pathogen - hypothetical protein plu0894 2 None None None 37525690 Common pepN aminopeptidase N plu1755 160 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 37527430 Common - hypothetical protein plu3557 48 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 37525090 Pathogen - hypothetical protein plu1122 1 None None None 37528137 Common - hypothetical protein plu4306 237 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 37528378 Common cysQ PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase plu4559 150 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 37524756 Common - hypothetical protein plu0755 34 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 37524053 Common - hypothetical protein plu0021 27 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37528182 Common - hypothetical protein plu4354 21 COG1598 COG1598, Uncharacterized conserved protein Function unknown 37527959 Common fucR L-fucose operon activator plu4112 60 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 37524042 Common - hypothetical protein plu0010 28 COG3499 COG3499, Phage protein U General function prediction only 37527214 Common recO DNA repair protein RecO plu3338 91 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 37527670 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit plu3808 191 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 37524506 Common gntK gluconate kinase 1 plu0497 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 37524595 Common ileS isoleucyl-tRNA synthetase plu0591 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37525532 Common artM arginine transporter permease subunit ArtM plu1585 171 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 37526827 Pathogen - hypothetical protein plu2937 2 None None None 37527838 Pathogen - hypothetical protein plu3983 1 None None None 37524283 Pathogen - hypothetical protein plu0264 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37526931 Common - hypothetical protein plu3043 7 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 37526417 Common - hypothetical protein plu2525 6 None None None 37527751 Common pgpA phosphatidylglycerophosphatase A plu3895 105 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 37525418 Common - hypothetical protein plu1466 12 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 37526282 Common rfnG electron transport complex protein RnfG plu2381 59 COG4659 RnfG, Predicted NADH:ubiquinone oxidoreductase, subunit RnfG Energy production and conversion 37525138 Common trmB tRNA (guanine-N(7))-methyltransferase plu1170 176 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 37528006 Common tccB1 Insecticidal toxin complex protein TccB1 plu4168 10 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 37524844 Common cueO multicopper oxidase plu0845 124 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 37526968 Common nuoK NADH dehydrogenase subunit K plu3080 72 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 37526455 Common nhaB sodium/proton antiporter plu2563 30 COG3067 NhaB, Na+/H+ antiporter Inorganic ion transport and metabolism 37528286 Pathogen - hypothetical protein plu4465 1 None None None 37524794 Common - hypothetical protein plu0793 5 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 37524384 Common - hypothetical protein plu0373 30 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37524109 Pathogen - hypothetical protein plu0083 1 None None None 37526896 Pathogen - hypothetical protein plu3008 5 None None None 37528586 Common - hypothetical protein plu4771 11 None None None 37526500 Common - hypothetical protein plu2609 4 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 37524084 Common asnA asparagine synthetase AsnA plu0052 31 COG2502 AsnA, Asparagine synthetase A Amino acid transport and metabolism 37526674 Common - palmitoyl transferase for Lipid A plu2784 14 None None None 37527474 Common rpiA ribose-5-phosphate isomerase A plu3606 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 37525638 Common - hypothetical protein plu1700 23 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37528162 Common adhC alcohol dehydrogenase class III (glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) plu4332 201 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 37524047 Common - hypothetical protein plu0015 42 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37525120 Common - hypothetical protein plu1152 17 None None None 37526938 Common gyrA DNA gyrase subunit A plu3050 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 37525493 Common maeA malate dehydrogenase (oxaloacetate-decarboxylating) plu1546 198 COG0281 SfcA, Malic enzyme Energy production and conversion 37525360 Common seqA replication initiation regulator SeqA plu1406 23 COG3057 SeqA, Negative regulator of replication initiationR DNA replication, recombination, and repair 37524727 Pathogen - hypothetical protein plu0726 1 None None None 37525707 Common fabA 3-hydroxydecanoyl-(acyl carrier protein) dehydratase plu1772 83 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 37526814 Common - hypothetical protein plu2924 4 None None None 37525728 Common - hypothetical protein plu1794 18 None None None 37526798 Common - hypothetical protein plu2908 7 None None None 37526507 Common - hypothetical protein plu2616 76 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 37526627 Common - hypothetical protein plu2737 8 COG3433 COG3433, Aryl carrier domain Secondary metabolites biosynthesis, transport, and catabolism 37526492 Common - hypothetical protein plu2601 24 COG3313 COG3313, Predicted Fe-S protein General function prediction only 37527883 Common - hypothetical protein plu4031 72 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 37525175 Pathogen - hypothetical protein plu1207 3 None None None 37524951 Common tcdB1 Insecticidal toxin complex protein TcdB1 plu0961 18 None None None 37524547 Common - hypothetical protein plu0541 7 None None None 37527995 Common - hypothetical protein plu4153 158 COG1522 Lrp, Transcriptional regulators Transcription 37528355 Common rrmJ 23S rRNA methyltransferase J plu4536 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 37524941 Common - hypothetical protein plu0949 80 COG1309 AcrR, Transcriptional regulator Transcription 37525030 Pathogen - hypothetical protein plu1045 1 None None None 37527547 Common metK S-adenosylmethionine synthetase plu3683 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 37526777 Common - hypothetical protein plu2887 10 COG5412 COG5412, Phage-related protein Function unknown 37525898 Common - hypothetical protein plu1976 11 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 37524761 Common - hypothetical protein plu0760 224 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524102 Common - hypothetical protein plu0076 78 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 37524070 Common glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase plu0038 234 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 37524806 Common tccA3 Insecticidal toxin complex protein TccA3 plu0805 6 None None None 37526731 Common rne ribonuclease E plu2841 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 37524452 Common - hypothetical protein plu0443 10 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 37525194 Common - hypothetical protein plu1227 16 None None None 37525974 Common - hypothetical protein plu2057 87 None None None 37527627 Common - hypothetical protein plu3765 8 None None None 37527287 Common - hypothetical protein plu3413 9 None None None 37528273 Common fecE iron-dicitrate transporter ATP-binding subunit plu4450 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 37528622 Common wblM WblM protein plu4809 195 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37528697 Common - hypothetical protein plu4891 26 None None None 37527494 Pathogen - hypothetical protein plu3626 1 None None None 37526001 Pathogen - hypothetical protein plu2084 2 None None None 37527620 Pathogen - hypothetical protein plu3758 5 None None None 37524488 Pathogen - hypothetical protein plu0479 1 None None None 37526184 Common - hypothetical protein plu2271 122 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 37524415 Common - hypothetical protein plu0406 9 None None None 37524592 Common nhaR transcriptional activator NhaR plu0588 137 COG0583 LysR, Transcriptional regulator Transcription 37527092 Common ISPlu6F Transposase, IS982 family plu3208 30 None None None 37525399 Common - hypothetical protein plu1445 60 COG2808 PaiB, Transcriptional regulator Transcription 37528343 Common nlpI lipoprotein NlpI plu4524 50 COG4785 NlpI, Lipoprotein NlpI, contains TPR repeats General function prediction only 37527340 Pathogen - hypothetical protein plu3467 2 None None None 37524725 Common - hypothetical protein plu0724 11 None None None 37527543 Common - hypothetical protein plu3679 109 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 37525135 Common mltC murein transglycosylase C plu1167 128 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 37527454 Pathogen - hypothetical protein plu3585 1 None None None 37528109 Common - hypothetical protein plu4278 34 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37527146 Pathogen - hypothetical protein plu3264 1 None None None 37528670 Common walO WalO protein plu4861 77 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 37525689 Common pcnB nicotinate phosphoribosyltransferase plu1754 93 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 37525868 Common fliI flagellum-specific ATP synthase plu1945 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 37524396 Common ISPlu10K Transposase, IS630 family plu0385 57 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528394 Common rnr exoribonuclease R plu4575 201 COG0557 VacB, Exoribonuclease R Transcription 37527704 Common - hypothetical protein plu3844 15 None None None 37524742 Common - hypothetical protein plu0741 78 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 37527651 Pathogen - hypothetical protein plu3789 3 None None None 37526442 Common topB DNA topoisomerase III plu2550 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 37525925 Common - hypothetical protein plu2006 12 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526289 Common - hypothetical protein plu2388 34 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37526026 Common ruvC Holliday junction resolvase plu2110 198 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 37524785 Common - hypothetical protein plu0784 35 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37528621 Common wblF WblF protein plu4808 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 37528644 Pathogen - hypothetical protein plu4835 1 None None None 37524958 Pathogen tchA hypothetical protein plu0968 4 None None None 37525679 Common - hypothetical protein plu1742 19 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 37524228 Common feoB ferrous iron transport protein B plu0208 185 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 37528202 Common lexA LexA repressor plu4374 172 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 37526465 Pathogen - hypothetical protein plu2573 1 None None None 37524409 Common ISPlu6L Transposase, IS982 family plu0400 30 None None None 37525631 Common - hypothetical protein plu1693 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37524252 Common - hypothetical protein plu0233 29 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 37527923 Common ISPlu8B Transposase, IS630 family plu4076 45 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524681 Common yaeT outer membrane protein assembly factor YaeT plu0680 160 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 37526111 Common - hypothetical protein plu2197 34 COG0439 AccC, Biotin carboxylase Lipid metabolism 37527893 Common rpoN RNA polymerase factor sigma-54 plu4041 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 37527335 Common - hypothetical protein plu3461 14 COG5566 COG5566, Uncharacterized conserved protein Function unknown 37525313 Pathogen - hypothetical protein plu1355 1 None None None 37524911 Common - hypothetical protein plu0919 9 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527733 Common ampG muropeptide transporter plu3873 113 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525444 Pathogen - hypothetical protein plu1493 5 None None None 37524588 Common bglG Cryptic beta-glucoside bgl operon antiterminator plu0584 29 COG3711 BglG, Transcriptional antiterminator Transcription 37526738 Common dld D-lactate dehydrogenase plu2848 57 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 37527862 Common elbB isoprenoid biosynthesis protein with amidotransferase-like domain plu4007 40 COG3155 ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 37528417 Common - predicted mechanosensitive channel plu4598 170 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 37526010 Common - hypothetical protein plu2093 56 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 37526915 Common - hypothetical protein plu3027 19 COG3299 XkdT, Uncharacterized homolog of phage Mu protein gp47 Function unknown 37527666 Common cysS cysteinyl-tRNA synthetase plu3804 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37525524 Pathogen - hypothetical protein plu1577 1 None None None 37526999 Pathogen - hypothetical protein plu3111 1 None None None 37527555 Common - hypothetical protein plu3691 7 None None None 37528079 Common - hypothetical protein plu4247 44 COG4667 COG4667, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 37526514 Common - hypothetical protein plu2623 19 None None None 37527292 Common - hypothetical protein plu3418 23 None None None 37525853 Common - hypothetical protein plu1930 15 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37528116 Common feaB Phenylacetaldehyde dehydrogenase (PAD) plu4285 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37527845 Common fadH 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase) plu3990 197 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 37525947 Common - hypothetical protein plu2030 122 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 37525808 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 plu1884 169 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 37527412 Common prpE Propionate--CoA ligase (Propionyl-CoA synthetase) plu3539 218 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 37525784 Common cheR chemotaxis regulator, protein-glutamate methyltransferase plu1855 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 37524638 Pathogen - hypothetical protein plu0637 1 None None None 37525693 Common pyrD dihydroorotate dehydrogenase 2 plu1758 222 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 37526085 Common - hypothetical protein plu2169 18 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37528254 Pathogen - hypothetical protein plu4426 1 None None None 37524480 Common malT transcriptional regulator MalT plu0471 58 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 37525615 Common - hypothetical protein plu1677 2 COG4675 MdpB, Microcystin-dependent protein Function unknown 37527528 Common fruR DNA-binding transcriptional regulator FruR plu3664 122 COG1609 PurR, Transcriptional regulators Transcription 37527695 Common hemH ferrochelatase (protoheme ferro-lyase) (heme synthetase) plu3835 159 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 37526636 Common dapA dihydrodipicolinate synthase plu2746 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 37528591 Common - hypothetical protein plu4776 62 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 37528049 Pathogen - hypothetical protein plu4213 1 None None None 37526179 Common - hypothetical protein plu2266 135 COG0657 Aes, Esterase/lipase Lipid metabolism 37526704 Common lolC outer membrane-specific lipoprotein transporter subunit LolC plu2814 150 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 37525055 Common - hypothetical protein plu1070 22 None None None 37526019 Common - hypothetical protein plu2103 57 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37524657 Common inh Proteinase inhibitor Inh precursor plu0656 4 None None None 37524633 Common RecB exonuclease V subunit beta plu0632 222 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 37526138 Common - hypothetical protein plu2224 113 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37526784 Common - hypothetical protein plu2894 9 None None None 37524771 Common mrfB MrfB protein plu0770 12 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527407 Common - hypothetical protein plu3534 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37525123 Pathogen - hypothetical protein plu1155 3 None None None 37528249 Common metR Transcriptional activator protein MetR plu4421 180 COG0583 LysR, Transcriptional regulator Transcription 37525352 Common cysZ putative sulfate transport protein CysZ plu1396 44 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 37527745 Common ispA geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase) plu3886 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 37527066 Common tctC TctC protein plu3181 72 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 37528442 Common fepG Ferric enterobactin transport system permease protein FepG plu4625 190 COG4779 FepG, ABC-type enterobactin transport system, permease component Inorganic ion transport and metabolism 37524339 Pathogen - hypothetical protein plu0325 1 None None None 37527244 Common - hypothetical protein plu3370 6 COG5153 CVT17, Putative lipase essential for disintegration of autophagic bodies inside the vacuole Intracellular trafficking and secretion / Lipid metabolism 37525288 Common - hypothetical protein plu1322 63 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37524636 Common - hypothetical protein plu0635 121 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37526516 Common - hypothetical protein plu2625 82 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 37525234 Common - predicted lipoprotein plu1267 124 COG4105 ComL, DNA uptake lipoprotein General function prediction only 37528451 Pathogen - hypothetical protein plu4634 1 None None None 37524650 Common - hypothetical protein plu0649 218 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 37526863 Pathogen - hypothetical protein plu2973 1 None None None 37526123 Common - phenylpropionate dioxygenase, ferredoxin reductase subunit plu2209 187 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 37526544 Common nlpC Probable lipoprotein NlpC precursor plu2653 127 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 37525456 Common - hypothetical protein plu1505 216 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525920 Common - hypothetical protein plu2001 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526108 Common - hypothetical protein plu2194 30 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 37528513 Common fmt methionyl-tRNA formyltransferase plu4696 217 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 37528458 Common - hypothetical protein plu4641 7 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 37524678 Common uppS undecaprenyl pyrophosphate synthetase plu0677 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 37524587 Common bglF beta-glucoside-specific phosphotransferase system-dependent permease plu0583 44 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 37525298 Common rtxD RTX toxin ABC transporter protein (MFP) RtxD plu1332 125 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37524659 Common prtC Membrane Fusion Protein PrtC plu0658 124 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37525404 Common tolQ colicin uptake protein TolQ plu1452 148 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 37525567 Common rpsA 30S ribosomal protein S1 plu1622 216 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 37525820 Pathogen - hypothetical protein plu1897 1 None None None 37528712 Common - putative inner membrane protein translocase component YidC plu4906 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 37525834 Common - hypothetical protein plu1911 13 None None None 37526234 Pathogen - hypothetical protein plu2326 1 None None None 37528535 Common rpmC 50S ribosomal protein L29 plu4718 154 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 37524348 Common - hypothetical protein plu0335 15 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 37524870 Common - glutamyl-Q tRNA(Asp) synthetase plu0875 248 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 37525786 Common cheY chemotaxis regulator transmitting signal to flagellar motor component plu1857 222 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 37525087 Pathogen - hypothetical protein plu1119 1 None None None 37526427 Pathogen - hypothetical protein plu2535 5 COG3710 CadC, DNA-binding winged-HTH domains Transcription 37526386 Common oppA1 Periplasmic-binding protein precursor OppA1 plu2494 209 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 37528239 Common ubiB putative ubiquinone biosynthesis protein UbiB plu4411 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 37526131 Common - hypothetical protein plu2217 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37528647 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase plu4838 213 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 37524096 Common - hypothetical protein plu0070 63 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 37526723 Common fabG 3-oxoacyl-[acyl-carrier-protein] reductase plu2833 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37526917 Common - hypothetical protein plu3029 16 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 37527533 Common - hypothetical protein plu3669 47 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 37524295 Common - hypothetical protein plu0277 22 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 37527914 Common cafA ribonuclease G plu4067 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 37524672 Common map methionine aminopeptidase plu0671 247 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 37524708 Common - hypothetical protein plu0707 20 None None None 37528403 Common amiB N-acetylmuramoyl-L-alanine amidase AmiB precursor plu4584 174 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 37526736 Common - hypothetical protein plu2846 34 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37527570 Common - hypothetical protein plu3706 26 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37524863 Common yadG ABC transporter ATP-binding protein YadG plu0868 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 37526961 Common menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase plu3073 87 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 37527904 Common - hypothetical protein plu4057 12 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 37524354 Pathogen - hypothetical protein plu0341 3 None None None 37526353 Common tccA2 Insecticidal toxin complex protein TccA2 plu2460 7 None None None 37526419 Common - hypothetical protein plu2527 14 None None None 37526904 Common ISPlu1B Transposase, IS30 family plu3016 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 37528554 Common - hypothetical protein plu4737 15 None None None 37524836 Common agaD PTS system, N-acetylgalactosamine-specific IID component (EIID-AGA) (N-acetylgalactosamine-permease IID component) (Phosphotransferase enzyme II, D component) plu0837 41 COG3716 ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Carbohydrate transport and metabolism 37524374 Common - hypothetical protein plu0363 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 37527128 Pathogen - hypothetical protein plu3245 5 None None None 37524723 Common mutS DNA mismatch repair protein plu0722 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 37525073 Pathogen - hypothetical protein plu1092 2 None None None 37525643 Common - hypothetical protein plu1705 34 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37525157 Common - hypothetical protein plu1189 147 COG0583 LysR, Transcriptional regulator Transcription 37524459 Pathogen - hypothetical protein plu0450 1 None None None 37528428 Common - hypothetical protein plu4609 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37526454 Common fadR fatty acid metabolism regulator plu2562 71 COG2186 FadR, Transcriptional regulators Transcription 37526037 Common hexR DNA-binding transcriptional regulator HexR plu2121 107 COG1737 RpiR, Transcriptional regulators Transcription 37527444 Common - hypothetical protein plu3574 4 None None None 37527974 Common sugE quaternary ammonium compound-resistance protein SugE plu4129 147 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 37528072 Pathogen - hypothetical protein plu4239 1 None None None 37527793 Pathogen - hypothetical protein plu3938 2 None None None 37524500 Common - hypothetical protein plu0491 26 COG3068 COG3068, Uncharacterized protein conserved in bacteria Function unknown 37525328 Common ndk nucleoside diphosphate kinase plu1372 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 37526402 Common - hypothetical protein plu2510 81 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 37524648 Common - hypothetical protein plu0647 33 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 37528589 Common pfkA 6-phosphofructokinase plu4774 158 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 37527070 Common mnmC 5-methylaminomethyl-2-thiouridine methyltransferase plu3185 90 COG4121 COG4121, Uncharacterized conserved protein Function unknown 37526056 Common - predicted isomerase/hydrolase plu2140 178 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 37528097 Common - methionyl-tRNA synthetase plu4265 222 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37524644 Common - hypothetical protein plu0643 163 COG4935 COG4935, Regulatory P domain of the subtilisin-like proprotein convertases and other proteases Posttranslational modification, protein turnover, chaperones 37526756 Common bcr bicyclomycin/multidrug efflux system plu2866 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37524496 Common - hypothetical protein plu0487 72 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 37528607 Common cpxR DNA-binding response regulator in two-component regulatory system with CpxA plu4794 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37524518 Common - hypothetical protein plu0509 19 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 37526812 Common - hypothetical protein plu2922 44 COG2932 COG2932, Predicted transcriptional regulator Transcription 37526875 Common cobS cobalamin synthase plu2985 87 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 37527786 Common - hypothetical protein plu3931 6 COG5340 COG5340, Predicted transcriptional regulator Transcription 37525247 Common - hypothetical protein plu1280 176 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527027 Common ISPlu3P Transposase, IS630 family plu3140 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527148 Common ISPlu4C Transposase, IS4 family plu3268 19 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37525111 Common xerC site-specific tyrosine recombinase XerC plu1143 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37528183 Common - hypothetical protein plu4355 3 None None None 37526599 Common - hypothetical protein plu2708 11 None None None 37525357 Common gltX glutamyl-tRNA synthetase plu1401 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 37527607 Common - hypothetical protein plu3745 123 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 37528263 Pathogen - hypothetical protein plu4439 4 None None None 37524759 Common - hypothetical protein plu0758 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 37524471 Common - hypothetical protein plu0462 58 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524332 Common phlB PhlA hemolysin secretion/activation protein PhlB plu0317 46 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37528323 Common - hypothetical protein plu4502 11 None None None 37526882 Common cbiG cobalamin biosynthesis protein CbiG plu2992 78 COG2073 CbiG, Cobalamin biosynthesis protein CbiG Coenzyme metabolism 37525877 Common fliC flagellin plu1954 117 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 37528213 Common - hypothetical protein plu4385 15 COG2898 COG2898, Uncharacterized conserved protein Function unknown 37528449 Common rarD RarD protein plu4632 109 COG2962 RarD, Predicted permeases General function prediction only 37525734 Common - hypothetical protein plu1800 74 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 37525500 Pathogen - hypothetical protein plu1553 1 None None None 37528128 Common - hypothetical protein plu4297 108 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 37528561 Common argC N-acetyl-gamma-glutamyl-phosphate reductase plu4744 215 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 37527020 Pathogen - hypothetical protein plu3133 1 None None None 37524605 Common carA carbamoyl phosphate synthase small subunit plu0603 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 37524849 Common - hypothetical protein plu0852 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 37528437 Common recQ ATP-dependent DNA helicase RecQ plu4620 236 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 37525321 Pathogen - hypothetical protein plu1365 3 None None None 37526564 Common yfeB Iron transport system ATP-binding protein YfeB plu2673 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 37528421 Common - hypothetical protein plu4602 5 None None None 37526410 Common - hypothetical protein plu2518 10 None None None 37528052 Common - hypothetical protein plu4216 9 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37527302 Common - hypothetical protein plu3428 8 COG3499 COG3499, Phage protein U General function prediction only 37524993 Common - hypothetical protein plu1003 81 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 37526118 Common hcaE 3-phenylpropionate dioxygenase alpha subunit (digoxigenin alpha subunit) plu2204 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 37526846 Common - hypothetical protein plu2956 12 None None None 37527664 Common - hypothetical protein plu3802 113 COG0679 COG0679, Predicted permeases General function prediction only 37527079 Pathogen - hypothetical protein plu3194 1 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 37528159 Pathogen - hypothetical protein plu4329 1 None None None 161579560 Common - hypothetical protein plu4531 178 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 37526837 Common - hypothetical protein plu2947 17 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526919 Common - hypothetical protein plu3031 6 None None None 37526339 Pathogen - hypothetical protein plu2444 1 None None None 37524067 Common rpmJ 50S ribosomal protein L36 plu0035 55 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 37524698 Common metN DL-methionine transporter ATP-binding subunit plu0697 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 37524850 Common ISPlu1F Transposase, IS30 family plu0854 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 37527212 Common acpS 4'-phosphopantetheinyl transferase plu3336 152 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 37526378 Pathogen - hypothetical protein plu2486 2 None None None 37527538 Common leuB 3-isopropylmalate dehydrogenase plu3674 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 37527513 Common ftsZ cell division protein FtsZ plu3649 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 37528305 Common - hypothetical protein plu4484 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 37525509 Common - hypothetical protein plu1562 34 COG2606 EbsC, Uncharacterized conserved protein Function unknown 37525438 Common bioC biotin synthesis protein plu1487 182 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37525096 Common - hypothetical protein plu1128 7 None None None 37526330 Common topA DNA topoisomerase I plu2435 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 37527769 Common sbcC Nuclease sbcCD subunit C plu3913 124 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 37527161 Common iscA iron-sulfur cluster assembly protein plu3281 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 37524616 Common rluA ribosomal large subunit pseudouridine synthase A (pseudouridylate synthase) (uracil hydrolyase) plu0614 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 37526076 Common - hypothetical protein plu2160 6 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37527948 Common rpoH RNA polymerase factor sigma-32 plu4101 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 37526658 Common - hypothetical protein plu2768 51 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 37524391 Common - predicted kinase plu0380 51 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 37527087 Common fadL long-chain fatty acid outer membrane transporter plu3202 74 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 37527596 Common - hypothetical protein plu3734 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527630 Common sctO Type III secretion component protein SctO plu3768 6 None None None 37525596 Common - hypothetical protein plu1655 2 COG4675 MdpB, Microcystin-dependent protein Function unknown 37527597 Common - hypothetical protein plu3735 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525915 Common - hypothetical protein plu1996 14 COG3457 COG3457, Predicted amino acid racemase Amino acid transport and metabolism 37525401 Common cydA Cytochrome D ubiquinol oxidase subunit I (Cytochrome BD-I oxidase subunit I) plu1449 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 37524976 Common hpcD 5-carboxymethyl-2-hydroxy-muconic acid isomerase plu0986 32 COG3232 HpaF, 5-carboxymethyl-2-hydroxymuconate isomerase Amino acid transport and metabolism 37526589 Common manY PTS system, mannose-specific IIC component (EIIC-MAN) (Mannose-permease IIC component) (Phosphotransferase enzyme II, C component) (EII-P-MAN) plu2698 36 COG3715 ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC Carbohydrate transport and metabolism 37524233 Common envZ osmolarity sensor protein plu0213 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37527510 Common - SecA regulator SecM plu3646 11 None None None 37528013 Pathogen - hypothetical protein plu4175 2 None None None 37524411 Common murP N-acetylmuramic acid phosphotransfer permease plu0402 43 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 37525827 Common - hypothetical protein plu1904 6 None None None 37528564 Pathogen - hypothetical protein plu4747 1 None None None 37526954 Common - hypothetical protein plu3066 34 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 37525214 Common - hypothetical protein plu1247 99 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525825 Common - hypothetical protein plu1902 7 None None None 37526262 Common manA mannose-6-phosphate isomerase (phosphomannose isomerase) (phosphohexomutase) (PMI) plu2360 41 COG1482 ManA, Phosphomannose isomerase Carbohydrate transport and metabolism 37525385 Common sucB dihydrolipoamide acetyltransferase plu1431 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 37525781 Common cheW purine-binding chemotaxis protein plu1852 114 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 37525496 Common - hypothetical protein plu1549 24 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 37527579 Pathogen - hypothetical protein plu3716 4 None None None 37528062 Common - hypothetical protein plu4226 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 37524856 Common - hypothetical protein plu0861 26 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37525607 Common - hypothetical protein plu1666 41 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37525421 Common pnuC Protein PnuC plu1469 53 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 37527762 Common - hypothetical protein plu3906 33 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 37525591 Common - hypothetical protein plu1650 5 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37526495 Common - hypothetical protein plu2604 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 37527386 Common - hypothetical protein plu3513 35 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37525371 Common kdpD sensor protein KdpD plu1417 223 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 161579567 Common maf Maf-like protein plu2839 185 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 37524215 Common glpD glycerol-3-phosphate dehydrogenase plu0194 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 37528146 Common ISPlu6C Transposase, IS982 family plu4315 30 None None None 37524922 Pathogen - hypothetical protein plu0930 1 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 37526835 Pathogen - hypothetical protein plu2945 1 None None None 37524932 Common gloB hydroxyacylglutathione hydrolase (glyoxalase II) plu0940 163 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 37526274 Pathogen - hypothetical protein plu2373 2 None None None 37526718 Common tdk thymidylate kinase plu2828 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 37525465 Common - hypothetical protein plu1514 20 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 37526681 Common - hypothetical protein plu2791 115 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 37526218 Common - hypothetical protein plu2306 21 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37525199 Common - hypothetical protein plu1232 17 None None None 37528549 Common birA biotin--protein ligase plu4732 231 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 37524623 Common lgt prolipoprotein diacylglyceryl transferase plu0622 209 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 37528523 Common secY preprotein translocase subunit SecY plu4706 225 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 37527479 Common - hypothetical protein plu3611 90 COG2968 COG2968, Uncharacterized conserved protein Function unknown 37525622 Pathogen - hypothetical protein plu1684 1 None None None 37527476 Pathogen - hypothetical protein plu3608 1 None None None 37528059 Common - hypothetical protein plu4223 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 37524187 Common - hypothetical protein plu0165 139 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37527354 Pathogen - hypothetical protein plu3481 1 None None None 37525478 Common - hypothetical protein plu1530 207 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 37524948 Common - hypothetical protein plu0958 43 COG0456 RimI, Acetyltransferases General function prediction only 37525816 Common - hypothetical protein plu1893 8 None None None 37526574 Common proQ putative solute/DNA competence effector plu2683 33 COG3109 ProQ, Activator of osmoprotectant transporter ProP Signal transduction mechanisms 37527394 Common - hypothetical protein plu3521 12 COG5293 COG5293, Uncharacterized protein conserved in bacteria Function unknown 37524305 Common - hypothetical protein plu0287 133 COG2860 COG2860, Predicted membrane protein Function unknown 37524523 Pathogen tcaZ Insecticidal toxin complex protein TcaZ plu0514 1 None None None 37528226 Common hemG protoporphyrinogen oxidase plu4398 34 COG4635 HemG, Flavodoxin Energy production and conversion / Coenzyme metabolism 37525450 Common moaA molybdenum cofactor biosynthesis protein A plu1499 196 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 37528704 Common selB selenocysteinyl-tRNA-specific translation factor plu4898 249 COG3276 SelB, Selenocysteine-specific translation elongation factor Translation, ribosomal structure and biogenesis 37527171 Common glyA serine hydroxymethyltransferase plu3291 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 37526048 Common - hypothetical protein plu2132 199 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 37524265 Common - hypothetical protein plu0246 50 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 37527552 Common xerC site-specific tyrosine recombinase XerC plu3688 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37528256 Common - hypothetical protein plu4430 18 None None None 37524782 Pathogen - hypothetical protein plu0781 1 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527770 Pathogen - hypothetical protein plu3914 1 None None None 37525845 Common flgI flagellar basal body P-ring protein plu1922 104 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 37527680 Common - hypothetical protein plu3820 193 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 37526805 Pathogen - hypothetical protein plu2915 1 None None None 37524367 Common - hypothetical protein plu0354 8 COG5435 COG5435, Uncharacterized conserved protein Function unknown 37524448 Common rpoB DNA-directed RNA polymerase subunit beta plu0439 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 37526002 Common - hypothetical protein plu2085 69 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 37528297 Pathogen - hypothetical protein plu4476 1 None None None 37527738 Common cyoD cytochrome o ubiquinol oxidase subunit IV plu3878 56 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 37525255 Common ogt methylated-DNA-protein-cysteine S-methyltransferase plu1288 217 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 37527400 Common - hypothetical protein plu3527 23 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 37527714 Common - hypothetical protein plu3854 28 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 37525752 Common bssS biofilm formation regulatory protein BssS plu1818 11 None None None 37526985 Pathogen - hypothetical protein plu3097 1 None None None 37526768 Common - hypothetical protein plu2878 14 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 37526528 Common - hypothetical protein plu2637 12 None None None 37524201 Common - hypothetical protein plu0179 46 COG3153 COG3153, Predicted acetyltransferase General function prediction only 37525849 Common - hypothetical protein plu1926 60 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37527142 Common - hypothetical protein plu3260 48 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 37527678 Common tesA multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 plu3818 97 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 37525919 Common - hypothetical protein plu2000 8 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 37528367 Common argR arginine repressor plu4548 75 COG1438 ArgR, Arginine repressor Transcription 37524877 Common mrcB penicillin-binding protein 1b plu0883 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 37528542 Common rplD 50S ribosomal protein L4 plu4725 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 37527724 Common - hypothetical protein plu3864 95 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 37525748 Common htrB lipid A biosynthesis lauroyl acyltransferase plu1814 77 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 37526067 Pathogen - hypothetical protein plu2151 1 None None None 37526703 Common lolD lipoprotein transporter ATP-binding subunit plu2813 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 37527112 Pathogen - hypothetical protein plu3229 6 None None None 37525963 Common - hypothetical protein plu2046 3 None None None 37524429 Common yheS putative ABC transporter ATP-binding protein plu0420 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 37524147 Common uspA universal stress protein A plu0121 35 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 37525065 Common - hypothetical protein plu1084 21 None None None 37524612 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase plu0610 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 37526070 Pathogen - hypothetical protein plu2154 1 COG5302 COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid General function prediction only 37528465 Common - hypothetical protein plu4648 21 COG2314 XynA, Predicted membrane protein Function unknown 37528600 Common - hypothetical protein plu4785 15 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37527807 Common icc cyclic 3',5'-adenosine monophosphate phosphodiesterase plu3952 93 COG1409 Icc, Predicted phosphohydrolases General function prediction only 37528089 Common - hypothetical protein plu4257 37 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 37526646 Common celC PTS system, cellobiose-specific IIA component (EIIA-CEL) (Cellobiose-permease IIA component) (Phosphotransferase enzyme II, A component) (EIII-CEL) plu2756 31 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 37525143 Common - hypothetical protein plu1175 2 None None None 37526408 Common - hypothetical protein plu2516 2 None None None 37527829 Common folB bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase plu3974 98 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 37528651 Common - hypothetical protein plu4842 65 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 37528295 Common - hypothetical protein plu4474 17 COG3423 Nlp, Predicted transcriptional regulator Transcription 37528384 Common - hypothetical protein plu4565 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 37528028 Common - hypothetical protein plu4190 206 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37526434 Pathogen - hypothetical protein plu2542 4 None None None 37524277 Pathogen - hypothetical protein plu0258 2 None None None 37527150 Pathogen - hypothetical protein plu3270 1 COG3636 COG3636, Predicted transcriptional regulator Transcription 37524539 Common - hypothetical protein plu0533 22 None None None 37525850 Common - hypothetical protein plu1927 9 None None None 37528040 Common - hypothetical protein plu4202 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 37524044 Common - hypothetical protein plu0012 10 None None None 37526480 Common sapC Peptide transport system permease protein SapC plu2589 210 COG4171 SapC, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 37524164 Common - hypothetical protein plu0139 121 COG1414 IclR, Transcriptional regulator Transcription 37528579 Common menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase plu4764 99 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 37527396 Pathogen - hypothetical protein plu3523 5 None None None 37526927 Common - hypothetical protein plu3039 4 None None None 37526690 Common - hypothetical protein plu2800 16 None None None 37525210 Common proB gamma-glutamyl kinase plu1243 198 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 37524250 Pathogen - hypothetical protein plu0231 1 None None None 37527517 Common murC UDP-N-acetylmuramate--L-alanine ligase plu3653 208 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 37524433 Common fkpA FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) plu0424 136 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 37525955 Pathogen - hypothetical protein plu2038 1 None None None 37528497 Common - hypothetical protein plu4680 205 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525548 Common ftsK cell division protein plu1601 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 37528258 Pathogen - hypothetical protein plu4434 1 None None None 37525433 Common - hypothetical protein plu1482 9 None None None 37526497 Common - putative DNA-binding transcriptional regulator plu2606 164 COG0583 LysR, Transcriptional regulator Transcription 37526594 Pathogen - hypothetical protein plu2703 1 None None None 37528135 Common - hypothetical protein plu4304 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 37528658 Common rfaC ADP-heptose:LPS heptosyl transferase I plu4849 81 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 37524482 Common - hypothetical protein plu0473 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 37526115 Common - hypothetical protein plu2201 66 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 37525945 Common uvrY response regulator plu2028 215 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527991 Pathogen - hypothetical protein plu4146 1 None None None 37526753 Common - hypothetical protein plu2863 18 None None None 37528170 Common crtI phytoene dehydrogenase (phytoene desaturase) plu4342 99 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528550 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase (UDP-N-acetylmuramate dehydrogenase) plu4733 193 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 37528282 Pathogen - hypothetical protein plu4461 2 None None None 37524581 Common galM aldose 1-epimerase plu0577 93 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 37528687 Common - hypothetical protein plu4879 4 None None None 37524455 Pathogen - hypothetical protein plu0446 1 None None None 37525778 Common motA flagellar motor protein MotA plu1849 119 COG1291 MotA, Flagellar motor component Cell motility and secretion 37528373 Common - hypothetical protein plu4554 127 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 37525413 Pathogen - hypothetical protein plu1461 1 None None None 37528502 Common ilvG acetolactate synthase 2 catalytic subunit plu4685 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 37524532 Common - hypothetical protein plu0524 223 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 37528638 Common wblZ WblZ protein plu4825 133 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 37528221 Pathogen - hypothetical protein plu4393 1 None None None 37525996 Common luxC Fatty acid reductase plu2079 19 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37528160 Common - hypothetical protein plu4330 2 None None None 37525205 Common hemR Hemin receptor precursor protein HemR plu1238 71 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37524798 Common - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase plu0797 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 37524519 Common - hypothetical protein plu0510 9 None None None 37528415 Common - ribosome-associated GTPase plu4596 163 COG1162 COG1162, Predicted GTPases General function prediction only 37526774 Pathogen - hypothetical protein plu2884 1 None None None 37524568 Common arcA DNA-binding response regulator in two-component regulatory system with ArcB or CpxA plu0562 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37527469 Common pepP proline aminopeptidase P II plu3601 247 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 37524342 Common ISPlu11E Transposase, IS982 family plu0328 29 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37527135 Common - hypothetical protein plu3252 7 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 37527957 Common - hypothetical protein plu4110 70 COG1738 COG1738, Uncharacterized conserved protein Function unknown 37527193 Common - hypothetical protein plu3315 17 None None None 37527060 Common usg hypothetical protein plu3174 186 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 37524058 Common - hypothetical protein plu0026 25 COG5004 COG5004, P2-like prophage tail protein X General function prediction only 37524093 Common - hypothetical protein plu0061 187 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525092 Pathogen - hypothetical protein plu1124 1 None None None 37525794 Common - hypothetical protein plu1870 123 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 37526198 Common bvgR Two-component response regulator BvgR protein plu2285 177 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527261 Pathogen - hypothetical protein plu3387 2 None None None 37528307 Common - hypothetical protein plu4486 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 37525340 Common - putative acetyltransferase plu1384 57 COG0456 RimI, Acetyltransferases General function prediction only 37524731 Pathogen - hypothetical protein plu0730 1 None None None 37526920 Common - hypothetical protein plu3032 8 None None None 37526299 Common - hypothetical protein plu2398 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37527946 Common - hypothetical protein plu4099 13 None None None 37527950 Common ftsE cell division protein FtsE plu4103 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 37527462 Common - hypothetical protein plu3593 6 None None None 37525228 Common - hypothetical protein plu1261 177 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37524473 Common - hypothetical protein plu0464 6 None None None 37524316 Common - hypothetical protein plu0299 4 None None None 37526191 Common ccdA CcdA protein plu2278 8 COG5302 COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid General function prediction only 37526249 Common goaG 4-aminobutyrate aminotransferase plu2347 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 37527041 Pathogen - hypothetical protein plu3155 1 None None None 37527623 Common sctV Type III secretion protein SctV plu3761 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 37526270 Common - hypothetical protein plu2368 15 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 37528155 Common - hypothetical protein plu4325 27 COG3440 COG3440, Predicted restriction endonuclease Defense mechanisms 37526349 Common - hypothetical protein plu2456 219 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 37525526 Common - undecaprenyl pyrophosphate phosphatase plu1579 44 None None None 37525657 Common - hypothetical protein plu1720 10 None None None 37526470 Common tpx thiol peroxidase plu2579 116 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 37524450 Common - hypothetical protein plu0441 21 COG4683 COG4683, Uncharacterized protein conserved in bacteria Function unknown 37527265 Common - hypothetical protein plu3391 3 None None None 37524073 Common atpG F0F1 ATP synthase subunit gamma plu0041 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 37524991 Common - hypothetical protein plu1001 13 None None None 37527442 Common - hypothetical protein plu3572 2 None None None 37528405 Common - hypothetical protein plu4586 127 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 37525063 Common - hypothetical protein plu1082 21 None None None 37525440 Common - hypothetical protein plu1489 71 COG1738 COG1738, Uncharacterized conserved protein Function unknown 37528484 Common rep ATP-dependent DNA helicase Rep plu4667 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 37526535 Common - hypothetical protein plu2644 143 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 37528167 Common crtE hypothetical protein plu4337 203 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 37528461 Common hemC porphobilinogen deaminase plu4644 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 37526365 Common - hypothetical protein plu2472 8 COG0431 COG0431, Predicted flavoprotein General function prediction only 37526653 Common ppk polyphosphate kinase plu2763 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 37524718 Common pcm protein-L-isoaspartate O-methyltransferase plu0717 157 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 37528479 Common wecA undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase plu4662 183 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 37527486 Pathogen - hypothetical protein plu3618 1 None None None 37527108 Common - hypothetical protein plu3225 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 37525774 Common - hypothetical protein plu1843 120 COG1285 SapB, Uncharacterized membrane protein Function unknown 37528547 Common tuf elongation factor Tu plu4730 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 37526471 Common tyrR DNA-binding transcriptional dual regulator, tyrosine-binding plu2580 173 COG3283 TyrR, Transcriptional regulator of aromatic amino acids metabolism Transcription / Amino acid transport and metabolism 37526153 Common - hypothetical protein plu2240 124 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 37524631 Common recC exonuclease V subunit gamma plu0630 66 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 37528574 Common priA primosome assembly protein PriA plu4759 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 37526120 Common hcaC 3-phenylpropionate dioxygenase ferredoxin subunit plu2206 87 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 37524445 Common rplA 50S ribosomal protein L1 plu0436 248 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 37527272 Common - hypothetical protein plu3398 4 None None None 37527391 Common - hypothetical protein plu3518 18 COG2273 SKN1, Beta-glucanase/Beta-glucan synthetase Carbohydrate transport and metabolism 37525307 Pathogen - hypothetical protein plu1347 2 None None None 37527202 Pathogen - hypothetical protein plu3325 1 None None None 37527307 Common - hypothetical protein plu3433 5 None None None 37528695 Common fdoI formate dehydrogenase-O subunit gamma plu4889 66 COG2864 FdnI, Cytochrome b subunit of formate dehydrogenase Energy production and conversion 37526660 Common - hypothetical protein plu2770 162 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 37526205 Common - hypothetical protein plu2292 36 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 37525338 Common - hypothetical protein plu1382 46 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 37527374 Pathogen - hypothetical protein plu3501 1 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 37524899 Common dgt deoxyguanosinetriphosphate triphosphohydrolase plu0907 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 37528528 Common rplF 50S ribosomal protein L6 plu4711 229 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 37526260 Common - hypothetical protein plu2358 32 COG5654 COG5654, Uncharacterized conserved protein Function unknown 37526370 Common ompW outer membrane protein W plu2478 70 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 37524754 Common - hypothetical protein plu0753 88 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 37525236 Common - hypothetical protein plu1269 181 COG1496 COG1496, Uncharacterized conserved protein Function unknown 37526578 Common - hypothetical protein plu2687 25 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 37527827 Common cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase plu3972 184 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 37525745 Common - hypothetical protein plu1811 54 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 37527935 Common - tRNA-dihydrouridine synthase B plu4088 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 37526853 Common - hypothetical protein plu2963 29 None None None 37527993 Pathogen - hypothetical protein plu4149 1 None None None 37528353 Common folP dihydropteroate synthase plu4534 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 37528470 Common wecF 4-alpha-L-fucosyltransferase plu4653 16 None None None 37525262 Common rlpA rare lipoprotein A plu1295 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 37526689 Common - hypothetical protein plu2799 200 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 37526438 Common - hypothetical protein plu2546 3 None None None 37526667 Common baeS signal transduction histidine-protein kinase BaeS plu2777 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37525576 Common - hypothetical protein plu1632 160 COG1278 CspC, Cold shock proteins Transcription 37525669 Pathogen - hypothetical protein plu1732 5 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 37524763 Common - hypothetical protein plu0762 107 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 37525866 Common fliK Flagellar hook-length control protein FliK plu1943 49 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 37527324 Common - hypothetical protein plu3450 2 None None None 37525711 Common sulA SOS cell division inhibitor plu1776 20 COG5404 SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation Cell division and chromosome partitioning 37527197 Common adiA Biodegradative arginine decarboxylase plu3319 85 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 37526177 Common - hypothetical protein plu2264 28 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 37527956 Common sirA cell developmental protein SirA plu4109 102 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 37527902 Pathogen - hypothetical protein plu4052 4 None None None 37525927 Common - hypothetical protein plu2008 13 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524883 Pathogen - hypothetical protein plu0891 2 None None None 37527553 Common - hypothetical protein plu3689 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37527414 Common prpC methylcitrate synthase plu3541 194 COG0372 GltA, Citrate synthase Energy production and conversion 161579571 Common znuC high-affinity zinc transporter ATPase plu2114 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 37524812 Common afuB Permease component of transport system for ferric iron, AfuB protein plu0811 221 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 37526706 Common - hypothetical protein plu2816 11 COG3207 DIT1, Pyoverdine/dityrosine biosynthesis protein Secondary metabolites biosynthesis, transport, and catabolism 37528672 Common rpmG 50S ribosomal protein L33 plu4863 134 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 37527320 Common - hypothetical protein plu3446 4 None None None 37528666 Common mutM formamidopyrimidine-DNA glycosylase plu4857 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 37528679 Common rph ribonuclease PH plu4870 200 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 37524033 Common dnaA chromosomal replication initiation protein plu0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 37528624 Common wblO WblO protein plu4811 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 37527305 Common - hypothetical protein plu3431 24 COG3498 COG3498, Phage tail tube protein FII General function prediction only 37526103 Common - hypothetical protein plu2187 49 COG2313 IndA, Uncharacterized enzyme involved in pigment biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 37527895 Common ptsN sugar-specific enzyme IIA component of PTS plu4043 130 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 37524744 Common - hypothetical protein plu0743 65 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 37524749 Common - hypothetical protein plu0748 42 None None None 37526721 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II plu2831 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37526290 Common - hypothetical protein plu2389 15 None None None 37524326 Pathogen - hypothetical protein plu0309 1 None None None 37524259 Common - hypothetical protein plu0240 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 37526396 Common purU formyltetrahydrofolate deformylase plu2504 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 37527337 Pathogen - hypothetical protein plu3463 2 None None None 37527721 Common - hypothetical protein plu3861 210 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 37527777 Pathogen - hypothetical protein plu3922 1 None None None 37526242 Common - hypothetical protein plu2340 33 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 37526317 Common - hypothetical protein plu2421 64 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37527791 Common - hypothetical protein plu3936 176 COG0583 LysR, Transcriptional regulator Transcription 37526221 Common - hypothetical protein plu2313 56 None None None 37527502 Common ppdD putative major pilin subunit plu3638 17 COG4969 PilA, Tfp pilus assembly protein, major pilin PilA Cell motility and secretion / Intracellular trafficking and secretion 37526555 Common pheT phenylalanyl-tRNA synthetase subunit beta plu2664 227 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 37527831 Common gcp O-sialoglycoprotein endopeptidase plu3976 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 37528150 Common hsdS Type I restriction enzyme specificity protein HsdS plu4320 58 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 37527842 Common - hypothetical protein plu3987 61 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 37526763 Common - hypothetical protein plu2873 14 None None None 37524358 Common ISPlu3Aa Transposase, IS630 family plu0345 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528047 Common - hypothetical protein plu4211 31 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37525325 Common - hypothetical protein plu1369 52 COG1237 COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II General function prediction only 37527731 Common bolA transcriptional regulator BolA plu3871 103 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 37525695 Common - hypothetical protein plu1760 37 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 37524667 Pathogen - hypothetical protein plu0666 1 None None None 37527653 Pathogen - hypothetical protein plu3791 1 None None None 37524389 Common mobB molybdopterin-guanine dinucleotide biosynthesis protein B plu0378 101 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 37528235 Common hemB delta-aminolevulinic acid dehydratase plu4407 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 37526505 Common - hypothetical protein plu2614 175 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 37527509 Common secA preprotein translocase subunit SecA plu3645 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 37527983 Common dcuA anaerobic C4-dicarboxylate transporter plu4138 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 37527250 Common - hypothetical protein plu3376 63 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 37526856 Common - hypothetical protein plu2966 17 COG4542 PduX, Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase Secondary metabolites biosynthesis, transport, and catabolism 37527584 Common - hypothetical protein plu3721 10 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 37527416 Common prpR Propionate catabolism operon regulatory protein plu3543 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 37527564 Pathogen - hypothetical protein plu3700 3 None None None 37525610 Common - hypothetical protein plu1669 27 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37525059 Common - hypothetical protein plu1078 18 None None None 37524463 Common - hypothetical protein plu0454 6 COG5340 COG5340, Predicted transcriptional regulator Transcription 37525782 Common cheD Methyl-accepting chemotaxis protein I (MCP-I) (Serine chemoreceptor protein) plu1853 145 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 37526638 Common bcp thioredoxin-dependent thiol peroxidase plu2748 218 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 37524575 Common mogA molybdenum cofactor biosynthesis protein plu0569 182 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 37527526 Common mraW S-adenosyl-methyltransferase MraW plu3662 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 37527015 Common - hypothetical protein plu3127 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 37528316 Common - hypothetical protein plu4495 97 COG0730 COG0730, Predicted permeases General function prediction only 37524267 Common gltS Sodium/glutamate symport carrier protein (Glutamate permease) plu0248 51 COG0786 GltS, Na+/glutamate symporter Amino acid transport and metabolism 37528008 Pathogen - hypothetical protein plu4170 3 None None None 37525613 Common - hypothetical protein plu1675 248 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37524982 Common ngrA 4'-phosphopantetheinyl tranferase plu0992 38 COG2977 EntD, Phosphopantetheinyl transferase component of siderophore synthetase Secondary metabolites biosynthesis, transport, and catabolism 37527180 Common - hypothetical protein plu3301 20 None None None 37527231 Common ISPlu10C Transposase, IS630 family plu3357 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524189 Common - hypothetical protein plu0167 141 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 37524394 Common - hypothetical protein plu0383 36 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 37526127 Pathogen - hypothetical protein plu2213 1 None None None 37524867 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase plu0872 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 37526318 Common - hypothetical protein plu2422 2 None None None 37525582 Common mukE condesin subunit E plu1638 20 COG3095 MukE, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 37525362 Common - hypothetical protein plu1408 46 COG2510 COG2510, Predicted membrane protein Function unknown 37527697 Common htpG heat shock protein 90 plu3837 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 37525468 Common - hypothetical protein plu1517 5 COG3675 COG3675, Predicted lipase Lipid metabolism 37524235 Common pstC phosphate transporter permease subunit plu0215 225 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 37524512 Common bax hypothetical protein plu0503 32 COG2992 Bax, Uncharacterized FlgJ-related protein General function prediction only 37527257 Pathogen - hypothetical protein plu3383 3 None None None 37525726 Common - hypothetical protein plu1792 8 None None None 37527753 Common nusB transcription antitermination protein NusB plu3897 191 COG0781 NusB, Transcription termination factor Transcription 37527346 Common - hypothetical protein plu3473 17 None None None 37528118 Common - hypothetical protein plu4287 116 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 37524965 Common hpaB 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component (4-HPA 3-monooxygenase large component) (4-HPA 3-hydroxylase) plu0975 49 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 37525535 Common artP arginine transporter ATP-binding subunit plu1588 249 COG4161 ArtP, ABC-type arginine transport system, ATPase component Amino acid transport and metabolism 161579561 Common deaD ATP-dependent RNA helicase DeaD plu4523 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 37527285 Common - hypothetical protein plu3411 4 None None None 37525193 Common - hypothetical protein plu1226 68 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 37525416 Common - hypothetical protein plu1464 17 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37526976 Common nuoB NADH dehydrogenase subunit B plu3088 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 37526494 Common rnt ribonuclease T plu2603 69 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 37526898 Common - hypothetical protein plu3010 101 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37524504 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase plu0495 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 37524382 Common - hypothetical protein plu0371 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 37524418 Pathogen - hypothetical protein plu0409 3 None None None 37526588 Common manX PTS system, mannose-specific IIAB component (EIIAB-MAN) (Mannose-permease IIAB component) (Phosphotransferase enzyme II, AB component) (EIII-MAN) plu2697 91 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 37525718 Common - hypothetical protein plu1783 4 None None None 37524159 Common - hypothetical protein plu0133 179 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 37527822 Common - hypothetical protein plu3967 29 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 37528022 Pathogen - hypothetical protein plu4184 1 None None None 37528102 Common - hypothetical protein plu4270 17 COG2253 COG2253, Uncharacterized conserved protein Function unknown 37526280 Common rnfC electron transport complex protein RnfC plu2379 88 COG4656 RnfC, Predicted NADH:ubiquinone oxidoreductase, subunit RnfC Energy production and conversion 37527560 Common xerC site-specific tyrosine recombinase XerC plu3696 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 161579578 Common recG ATP-dependent DNA helicase RecG plu0259 211 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 37528241 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase plu4413 219 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37525217 Common alaS alanyl-tRNA synthetase plu1250 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37525636 Common - hypothetical protein plu1698 10 None None None 37527767 Common phoB phosphate regulon transcriptional regulatory protein plu3911 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37524103 Common - RNA polymerase sigma factor plu0077 86 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 37525680 Common - hypothetical protein plu1743 64 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37528284 Pathogen - hypothetical protein plu4463 2 None None None 37527031 Common lsrC ABC transporter permease protein (IM) LsrC plu3144 110 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 37527227 Common - hypothetical protein plu3351 40 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37526861 Common eutC ethanolamine ammonia-lyase small subunit plu2971 53 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 37525709 Common - hypothetical protein plu1774 17 COG3120 COG3120, Uncharacterized protein conserved in bacteria Function unknown 37528584 Common fpr ferredoxin-NADP reductase plu4769 104 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 37528626 Common wblQ WblQ protein plu4813 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 37525002 Common - hypothetical protein plu1012 29 COG5441 COG5441, Uncharacterized conserved protein Function unknown 37527728 Common clpX ATP-dependent protease ATP-binding subunit plu3868 232 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 37525137 Common mutY adenine DNA glycosylase plu1169 231 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 37527098 Common - hypothetical protein plu3215 5 None None None 37527565 Common - hypothetical protein plu3701 4 None None None 37524928 Pathogen - hypothetical protein plu0936 2 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 37527758 Common secD preprotein translocase subunit SecD plu3902 223 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 37524541 Pathogen - hypothetical protein plu0535 2 None None None 37524549 Common xerC site-specific tyrosine recombinase XerC plu0543 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37527435 Common - hypothetical protein plu3563 241 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 37527054 Common cvpA colicin V production protein plu3168 81 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 37527585 Common ISPlu3J Transposase, IS630 family plu3722 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525732 Common - hypothetical protein plu1798 4 None None None 37525479 Common - hypothetical protein plu1531 66 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37528311 Common argI ornithine carbamoyltransferase subunit I plu4490 238 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 37528200 Common - hypothetical protein plu4372 4 None None None 37528246 Common - pyrrolidone-carboxylate peptidase plu4418 56 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 37528110 Pathogen - hypothetical protein plu4279 2 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 37527629 Common sctN type III secretion system ATPase plu3767 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 37528714 Common rnpA ribonuclease P plu4908 76 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 37527456 Common ISPlu9E Transposase, IS4 Familly plu3587 26 None None None 37528070 Common - hypothetical protein plu4237 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37525383 Common sdhB succinate dehydrogenase iron-sulfur subunit plu1429 202 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 37525978 Pathogen - hypothetical protein plu2061 1 None None None 37526625 Common - hypothetical protein plu2735 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 37525896 Common - hypothetical protein plu1974 13 None None None 37525540 Common clpS ATP-dependent Clp protease adaptor protein ClpS plu1593 123 COG2127 COG2127, Uncharacterized conserved protein Function unknown 37526620 Common - hypothetical protein plu2730 15 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 37526672 Common thiD phosphomethylpyrimidine kinase plu2782 219 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 37526303 Common - hypothetical protein plu2403 225 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 37525913 Common - hypothetical protein plu1994 12 None None None 37525673 Pathogen - hypothetical protein plu1736 1 None None None 37528177 Common ssb single-strand DNA-binding protein plu4349 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 37524597 Common fkpB peptidylprolyl isomerase plu0593 126 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 37525716 Common - hypothetical protein plu1781 127 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 37528582 Common glpF glycerol uptake facilitator protein plu4767 134 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 37528211 Common dltB DltB protein for D-alanine esterification of lipoteichoic acid and wall teichoic acid plu4383 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 37525300 Pathogen - hypothetical protein plu1334 3 None None None 37527976 Common - hypothetical protein plu4131 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 37524683 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase plu0682 181 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 37524721 Common ISPlu3Y Transposase, IS630 family plu0720 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527105 Common - hypothetical protein plu3222 14 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 37528587 Common tpiA triosephosphate isomerase plu4772 224 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 37528218 Common - hypothetical protein plu4390 28 COG4757 COG4757, Predicted alpha/beta hydrolase General function prediction only 37525627 Common - hypothetical protein plu1689 20 None None None 37528432 Pathogen - hypothetical protein plu4615 3 None None None 37525446 Common - hypothetical protein plu1495 6 None None None 37525274 Common gltI glutamate and aspartate transporter subunit plu1307 148 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 37527800 Common - hypothetical protein plu3945 150 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 37527810 Common - hypothetical protein plu3955 7 None None None 37528119 Common - hypothetical protein plu4288 83 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37528107 Common ISPlu11A Transposase, IS982 family plu4276 29 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37525311 Pathogen - hypothetical protein plu1353 1 None None None 37528209 Common dltC D-alanine carrier protein DltC plu4381 4 None None None 37525822 Pathogen - hypothetical protein plu1899 1 None None None 37526355 Common trpE anthranilate synthase component I plu2462 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 37527001 Pathogen - hypothetical protein plu3113 3 None None None 37526459 Pathogen - hypothetical protein plu2567 1 None None None 37525829 Common - hypothetical protein plu1906 6 None None None 37524105 Common - hypothetical protein plu0079 27 COG2259 COG2259, Predicted membrane protein Function unknown 37525269 Common rlpB LPS-assembly lipoprotein RplB plu1302 33 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 37528556 Common sthA soluble pyridine nucleotide transhydrogenase plu4739 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 37527654 Pathogen - hypothetical protein plu3792 2 None None None 37525568 Common ihfB integration host factor subunit beta plu1623 202 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 37526452 Common dadX Alanine racemase, catabolic plu2560 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 37526631 Common - hypothetical protein plu2741 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37528609 Common wblA WblA protein plu4796 207 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 37524913 Common - hypothetical protein plu0921 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524498 Common hemE uroporphyrinogen decarboxylase plu0489 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 37524646 Common amiC N-acetylmuramoyl-L-alanine amidase precursor plu0645 178 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 37525046 Common IS_Pl3_3 hypothetical protein plu1061 67 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526906 Common - hypothetical protein plu3018 106 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37526404 Common - hypothetical protein plu2512 180 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37526697 Common phoP DNA-binding response regulator in two-component regulatory system with PhoQ plu2807 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37525872 Common fliE flagellar hook-basal body 11K protein FliE plu1949 61 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 37526988 Pathogen - hypothetical protein plu3100 1 None None None 37527784 Common rdgC recombination associated protein plu3929 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 37528125 Common - hypothetical protein plu4294 23 COG3423 Nlp, Predicted transcriptional regulator Transcription 37528193 Common - hypothetical protein plu4365 17 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 37527609 Common - hypothetical protein plu3747 9 None None None 37524124 Common hslR Heat shock protein 15 (HSP15) plu0098 110 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 37527177 Pathogen - hypothetical protein plu3297 1 None None None 37526758 Common - hypothetical protein plu2868 146 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 37524872 Common sfsA sugar fermentation stimulation protein A plu0877 106 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 37526751 Common - elongation factor P plu2861 215 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 37524765 Pathogen - hypothetical protein plu0764 1 None None None 37525900 Common - hypothetical protein plu1978 126 COG1609 PurR, Transcriptional regulators Transcription 37528537 Common rpsC 30S ribosomal protein S3 plu4720 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 37525552 Common - hypothetical protein plu1605 8 COG5473 COG5473, Predicted integral membrane protein Function unknown 37527860 Common - hypothetical protein plu4005 67 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 37527023 Common - hypothetical protein plu3136 4 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527163 Common iscS cysteine desulfurase plu3283 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 37525889 Common - hypothetical protein plu1967 11 COG3637 COG3637, Opacity protein and related surface antigens Cell envelope biogenesis, outer membrane 37528265 Pathogen - hypothetical protein plu4441 2 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37527303 Common - hypothetical protein plu3429 44 COG5283 COG5283, Phage-related tail protein Function unknown 37528463 Common hemX putative uroporphyrinogen III C-methyltransferase plu4646 55 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 37527865 Common gltD glutamate synthase subunit beta plu4010 208 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 37526562 Common - hypothetical protein plu2671 100 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 37525882 Common xylB xylulose kinase plu1959 173 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 37526163 Common - hypothetical protein plu2250 27 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 37527022 Common - hypothetical protein plu3135 210 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37528185 Common tyrB aromatic amino acid aminotransferase plu4357 86 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 37524980 Common hpaG1 hypothetical protein plu0990 160 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 37526609 Common maeB malic enzyme plu2719 217 COG0281 SfcA, Malic enzyme Energy production and conversion 37524752 Pathogen - hypothetical protein plu0751 1 None None None 37525359 Common glk glucokinase plu1405 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 37524757 Common - hypothetical protein plu0756 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37525323 Common - hypothetical protein plu1367 85 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 37527819 Common - hypothetical protein plu3964 50 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 37525551 Common serS seryl-tRNA synthetase plu1604 244 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 37527809 Common tolC outer membrane channel protein plu3954 137 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 37526844 Common ISPlu3Q Transposase, IS930 family plu2954 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524311 Common glyQ glycyl-tRNA synthetase subunit alpha plu0293 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 37526145 Common - hypothetical protein plu2232 11 None None None 37528439 Common fhuE FhuE receptor precursor (Outer-membrane receptor for ferric iron uptake) plu4622 105 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 37524330 Pathogen - hypothetical protein plu0315 1 None None None 37526884 Common cbiT cobalt-precorrin-6Y C(15)-methyltransferase plu2994 119 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 37527029 Common lsrR LsrR DNA-binding protein plu3142 62 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 37527610 Common - hypothetical protein plu3748 15 None None None 37527096 Common amiF formamidase plu3213 107 COG0388 COG0388, Predicted amidohydrolase General function prediction only 37528369 Common fbp fructose-1,6-bisphosphatase plu4550 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 37526257 Pathogen - hypothetical protein plu2355 1 None None None 37525309 Pathogen - hypothetical protein plu1351 1 None None None 37525514 Common hisH imidazole glycerol phosphate synthase subunit HisH plu1567 215 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 37525113 Common - hypothetical protein plu1145 214 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37527126 Pathogen - hypothetical protein plu3243 6 None None None 37524688 Common dnaE DNA polymerase III subunit alpha plu0687 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 37527080 Common hutC Histidine utilization repressor protein plu3195 125 COG2188 PhnF, Transcriptional regulators Transcription 37525354 Common ligA NAD-dependent DNA ligase LigA plu1398 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 37524834 Common agaV PTS system, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA') (N-acetylgalactosamine-permease IIB component 2) (Phosphotransferase enzyme II, B component 2) plu0835 41 COG3444 COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Carbohydrate transport and metabolism 37528270 Common fecB iron-dicitrate transporter substrate-binding subunit plu4447 82 COG4594 FecB, ABC-type Fe3+-citrate transport system, periplasmic component Inorganic ion transport and metabolism 37527619 Common - hypothetical protein plu3757 19 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 37528423 Pathogen - hypothetical protein plu4604 2 None None None 37525131 Common - hypothetical protein plu1163 11 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 37525594 Common - hypothetical protein plu1653 161 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37528001 Common - hypothetical protein plu4161 30 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 37527572 Common - hypothetical protein plu3708 9 None None None 37528142 Common - hypothetical protein plu4311 26 COG3766 COG3766, Predicted membrane protein Function unknown 37528389 Common rplI 50S ribosomal protein L9 plu4570 212 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 37527137 Common - hypothetical protein plu3254 32 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37524842 Common speE spermidine synthase plu0843 128 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 37526186 Common bglA 6-phospho-beta-glucosidase A plu2273 102 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 37525534 Common artI Arginine-binding periplasmic protein 1 precursor plu1587 186 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 37526394 Common hnr response regulator of RpoS plu2502 215 COG0784 CheY, FOG: CheY-like receiver Signal transduction mechanisms 37525381 Common sdhD succinate dehydrogenase cytochrome b556 small membrane subunit plu1427 55 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 37526065 Common acpD azoreductase plu2149 99 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 37525388 Common - hypothetical protein plu1434 37 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 37527246 Common grpE GrpE protein (HSP-70 cofactor) (heat shock protein B25.3) (HSP24) plu3372 230 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 37526983 Common ackA acetate kinase plu3095 162 COG0282 ackA, Acetate kinase Energy production and conversion 37527056 Common folC bifunctional folylpolyglutamate synthase/ dihydrofolate synthase plu3170 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 37524696 Common metQ DL-methionine transporter substrate-binding subunit plu0695 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 37524810 Pathogen - hypothetical protein plu0809 1 None None None 37526874 Common - hypothetical protein plu2984 62 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 37527775 Common - hypothetical protein plu3919 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 37527405 Common - hypothetical protein plu3532 224 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528540 Common rplB 50S ribosomal protein L2 plu4723 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 37524908 Common - hypothetical protein plu0916 7 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525180 Common - hypothetical protein plu1212 208 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528228 Common - hypothetical protein plu4400 133 COG1739 COG1739, Uncharacterized conserved protein Function unknown 37527492 Common pdhR transcriptional regulator PdhR plu3624 146 COG2186 FadR, Transcriptional regulators Transcription 37525397 Common - hypothetical protein plu1443 235 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 37528149 Common hsdM Type I site-specific deoxyribonuclease HsdM plu4319 159 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 37525859 Common fliR flagellar biosynthesis protein FliR plu1936 97 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 37526463 Pathogen - hypothetical protein plu2571 1 None None None 37527232 Common - hypothetical protein plu3358 48 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37527967 Pathogen - hypothetical protein plu4122 1 None None None 37525296 Common - hypothetical protein plu1330 148 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 37526306 Pathogen - hypothetical protein plu2406 1 None None None 37526028 Common ruvB Holliday junction DNA helicase B plu2112 229 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 37528237 Common tatB Sec-independent protein translocase protein plu4409 22 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 37524676 Common frr ribosome releasing factor plu0675 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 37528275 Common - hypothetical protein plu4452 218 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 37525683 Common - hypothetical protein plu1748 63 COG3108 COG3108, Uncharacterized protein conserved in bacteria Function unknown 37525071 Common - hypothetical protein plu1090 23 None None None 37528641 Common - hypothetical protein plu4832 5 COG5433 COG5433, Transposase DNA replication, recombination, and repair 37524491 Common thiG thiazole synthase plu0482 167 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 37526529 Common - hypothetical protein plu2638 137 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37527981 Common fxsA FxsA protein (Suppressor of F exclusion of phage T7) plu4136 13 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 37528401 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase plu4582 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 37527077 Common hutH histidine ammonia-lyase plu3192 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 37524337 Pathogen - hypothetical protein plu0323 1 None None None 37525257 Common ccrB camphor resistance protein CrcB plu1290 33 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 37526716 Common - predicted metallodependent hydrolase plu2826 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 37524671 Common glnD PII uridylyl-transferase plu0670 123 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 37524826 Pathogen - hypothetical protein plu0827 1 None None None 37524869 Common pcnB poly(A) polymerase I plu0874 207 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 37524885 Pathogen - hypothetical protein plu0893 2 None None None 37527168 Common treB trehalose(maltose)-specific PTS system components IIBC plu3288 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 37525155 Common - hypothetical protein plu1187 30 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 37528509 Common - putative ribosome maturation factor plu4692 237 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 37524217 Common glpG predicted intramembrane serine protease plu0196 43 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 37526522 Pathogen - hypothetical protein plu2631 4 COG4256 HemP, Hemin uptake protein Inorganic ion transport and metabolism 37525291 Common dinJ DNA-damage-inducible protein J plu1325 41 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 37527173 Pathogen - hypothetical protein plu3293 1 None None None 37527069 Common fabB 3-oxoacyl-(acyl carrier protein) synthase I plu3184 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37526934 Common - hypothetical protein plu3046 107 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37528382 Common - hypothetical protein plu4563 5 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 37527639 Pathogen sctB Type III secretion component protein SctB plu3777 5 None None None 37524572 Common - hypothetical protein plu0566 85 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 37527211 Common - hypothetical protein plu3335 105 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 37525281 Common nagC N-acetylglucosamine repressor plu1315 165 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 37524307 Common - hypothetical protein plu0289 11 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 37527464 Common gcvP glycine dehydrogenase plu3596 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 37524558 Common radA DNA repair protein RadA plu0552 212 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 37525843 Common flgG Flagellar basal-body rod protein FlgG (Distal rod protein) plu1920 125 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 37526803 Pathogen - hypothetical protein plu2913 1 None None None 37527682 Common - hypothetical protein plu3822 40 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37526363 Common - hypothetical protein plu2470 18 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 37526046 Common - hypothetical protein plu2130 28 COG4737 COG4737, Uncharacterized protein conserved in bacteria Function unknown 37525847 Common flgK flagellar hook-associated protein FlgK plu1924 126 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 37527274 Common - hypothetical protein plu3400 2 None None None 37526801 Common - hypothetical protein plu2911 7 COG1107 COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain DNA replication, recombination, and repair 37526004 Common - hypothetical protein plu2087 17 COG3381 TorD, Uncharacterized component of anaerobic dehydrogenases General function prediction only 37527140 Common - hypothetical protein plu3257 46 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528598 Pathogen - hypothetical protein plu4783 2 None None None 37527523 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase plu3659 207 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 37526035 Common - hypothetical protein plu2119 11 COG4675 MdpB, Microcystin-dependent protein Function unknown 37528083 Common holD DNA polymerase III subunit psi plu4251 19 COG3050 HolD, DNA polymerase III, psi subunit DNA replication, recombination, and repair 37525368 Common - hypothetical protein plu1414 98 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 37524197 Common uxuB D-mannonate oxidoreductase (fructuronate reductase) plu0175 90 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 37527368 Common - hypothetical protein plu3495 12 None None None 37527875 Pathogen - hypothetical protein plu4023 1 None None None 37528665 Common coaD phosphopantetheine adenylyltransferase plu4856 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 37527381 Pathogen - hypothetical protein plu3508 3 None None None 37527550 Common - hypothetical protein plu3686 3 None None None 37524427 Common - hypothetical protein plu0418 14 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37524607 Common - hypothetical protein plu0605 120 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37527859 Common - DnaA initiator-associating protein DiaA plu4004 123 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 37525810 Pathogen - hypothetical protein plu1886 1 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 37525081 Common - hypothetical protein plu1105 195 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 37527736 Common cyoB ubiquinol oxidase polypeptide I (cytochrome O subunit 1) (oxidase BO(3) subunit 1) (cytochrome O ubiquinol oxidase subunit 1) (ubiquinol oxidase chain A) plu3876 166 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 37526301 Pathogen - hypothetical protein plu2400 4 None None None 37527403 Common - hypothetical protein plu3530 244 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 37527881 Common - hypothetical protein plu4029 80 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 37524365 Pathogen - hypothetical protein plu0352 2 None None None 37524553 Common - hypothetical protein plu0547 7 None None None 37524149 Common - putative methyltransferase plu0123 49 None None None 37524738 Common - hypothetical protein plu0737 16 None None None 37528700 Common - hypothetical protein plu4894 29 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 37525922 Common - hypothetical protein plu2003 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525935 Common - hypothetical protein plu2018 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37526211 Common - hypothetical protein plu2298 8 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 37525930 Common - hypothetical protein plu2011 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524875 Common cpmI CpmI protein plu0881 45 COG1262 COG1262, Uncharacterized conserved protein Function unknown 37525149 Common - hypothetical protein plu1181 215 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 37525750 Common - hypothetical protein plu1816 135 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 37524049 Pathogen - hypothetical protein plu0017 5 None None None 37526746 Common - hypothetical protein plu2856 116 COG2855 COG2855, Predicted membrane protein Function unknown 37524946 Common pgk phosphoglycerate kinase plu0956 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 37525961 Common - hypothetical protein plu2044 223 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 37524275 Pathogen - hypothetical protein plu0256 1 None None None 37528087 Common - hypothetical protein plu4255 218 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37528293 Common - hypothetical protein plu4472 16 COG1476 COG1476, Predicted transcriptional regulators Transcription 37528653 Common - hypothetical protein plu4844 137 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 37526651 Common purN phosphoribosylglycinamide formyltransferase 1 (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) plu2761 220 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 37528526 Common rpsE 30S ribosomal protein S5 plu4709 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 37525578 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase plu1634 137 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 37524525 Common - hypothetical protein plu0517 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 37525818 Common flhB flagellar biosynthesis protein FlhB plu1895 130 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 37528411 Common - hypothetical protein plu4592 18 COG5499 COG5499, Predicted transcription regulator containing HTH domain Transcription 37526012 Common - hypothetical protein plu2095 116 COG2353 COG2353, Uncharacterized conserved protein Function unknown 37526607 Common - hypothetical protein plu2717 24 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 37524621 Common nudH dinucleoside polyphosphate hydrolase plu0620 120 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 37524453 Common - hypothetical protein plu0444 8 None None None 37528444 Common fhuF ferric iron reductase involved in ferric hydroximate transport plu4627 16 COG4114 FhuF, Uncharacterized Fe-S protein General function prediction only 37528011 Pathogen - hypothetical protein plu4173 3 None None None 37528050 Common - hypothetical protein plu4214 40 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37525604 Common - hypothetical protein plu1663 15 None None None 37525125 Pathogen - hypothetical protein plu1157 3 None None None 37527089 Pathogen - hypothetical protein plu3204 1 None None None 37525855 Common - hypothetical protein plu1932 20 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 37527594 Common - hypothetical protein plu3732 52 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 37526554 Common ihfA integration host factor subunit alpha plu2663 211 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 37525026 Common - hypothetical protein plu1041 30 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 37524118 Pathogen - hypothetical protein plu0092 2 None None None 37524937 Common - hypothetical protein plu0945 10 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 37526825 Common - hypothetical protein plu2935 16 COG3723 RecT, Recombinational DNA repair protein (RecE pathway) DNA replication, recombination, and repair 37526078 Common - hypothetical protein plu2162 108 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 37524974 Common gabD succinate-semialdehyde dehydrogenase plu0984 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37527632 Common sctQ type III secretion system protein plu3770 8 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 37528610 Common wblB WblB protein plu4797 185 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 37527648 Pathogen sctK Type III secretion component protein SctK plu3786 5 None None None 37528325 Common - hypothetical protein plu4504 97 COG3153 COG3153, Predicted acetyltransferase General function prediction only 37526839 Pathogen - hypothetical protein plu2949 1 None None None 37524973 Common hpcG 2-oxo-hepta-3-ene-1,7-dioic acid hydratase plu0983 64 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 37524563 Common trpR Trp operon repressor plu0557 25 COG2973 TrpR, Trp operon repressor Transcription 37525640 Common - hypothetical protein plu1702 8 None None None 37527856 Common - hypothetical protein plu4001 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 37524288 Pathogen - hypothetical protein plu0269 1 None None None 37524939 Common - hypothetical protein plu0947 8 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 37527110 Common - hypothetical protein plu3227 20 COG3673 COG3673, Uncharacterized conserved protein Function unknown 37525498 Pathogen - hypothetical protein plu1551 1 None None None 37528061 Common - hypothetical protein plu4225 26 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 37525436 Common bioB biotin synthetase (biotin synthase) plu1485 181 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 37528068 Common - hypothetical protein plu4232 71 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 37524210 Common cpmG CpmG protein involved in carbapenem resistance plu0188 3 None None None 37528144 Common - hypothetical protein plu4313 34 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 37528698 Common - hypothetical protein plu4892 26 None None None 37528360 Common rpmA 50S ribosomal protein L27 plu4541 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 37526328 Common - hypothetical protein plu2433 3 None None None 37528090 Common - hypothetical protein plu4258 50 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 37525127 Pathogen - hypothetical protein plu1159 3 None None None 37526889 Common cbiA cobyrinic acid a,c-diamide synthase plu2999 137 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 37525373 Common kdpB potassium-transporting ATPase subunit B plu1419 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 37527888 Common - D-arabinose 5-phosphate isomerase plu4036 166 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 37524600 Common - hypothetical protein plu0598 37 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 37526683 Common - hypothetical protein plu2793 176 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 37528707 Common hipB HipB protein plu4901 16 None None None 37525968 Pathogen - hypothetical protein plu2051 1 None None None 37524930 Pathogen - hypothetical protein plu0938 1 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 37524240 Common - hypothetical protein plu0220 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 37526276 Common - putative oxidoreductase plu2375 185 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 37524248 Common - hypothetical protein plu0229 21 COG3078 COG3078, Uncharacterized protein conserved in bacteria Function unknown 37524035 Common recF recombination protein F plu0003 167 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 37524854 Common - hypothetical protein plu0859 22 COG3423 Nlp, Predicted transcriptional regulator Transcription 37525981 Common - hypothetical protein plu2064 5 None None None 37525345 Common cysW sulfate/thiosulfate transporter permease subunit plu1389 208 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 37528335 Common - hypothetical protein plu4514 95 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 37525231 Common - hypothetical protein plu1264 26 COG2916 Hns, DNA-binding protein H-NS General function prediction only 37527361 Pathogen - hypothetical protein plu3488 1 None None None 37527535 Common fadD long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase) (LACS) plu3671 214 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 37526941 Common nrdB ribonucleotide-diphosphate reductase subunit beta plu3053 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 37527760 Common tgt queuine tRNA-ribosyltransferase plu3904 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 37526582 Common pip proline iminopeptidase (PIP) plu2691 112 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37527478 Common iciA chromosome replication initiation inhibitor protein plu3610 72 COG0583 LysR, Transcriptional regulator Transcription 37524388 Common - hypothetical protein plu0377 22 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 37526423 Common - hypothetical protein plu2531 21 None None None 37526890 Common - hypothetical protein plu3001 3 None None None 37526743 Common - hypothetical protein plu2853 82 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 37527174 Common recX Regulatory protein recX (oraA protein) plu3294 72 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 37524281 Common - hypothetical protein plu0262 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37525873 Pathogen - hypothetical protein plu1950 1 None None None 37524237 Common pstB phosphate transporter subunit plu0217 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 37527944 Common livH branched-chain amino acid transporter permease subunit LivH plu4097 155 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 37527468 Common ubiH 2-octaprenyl-6-methoxyphenyl hydroxylase plu3600 116 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37527356 Common - hypothetical protein plu3483 15 None None None 37527699 Common recR recombination protein RecR plu3839 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 37524137 Common cynT carbonic anhydrase plu0111 157 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 37525171 Common - hypothetical protein plu1203 17 COG2991 COG2991, Uncharacterized protein conserved in bacteria Function unknown 37525504 Common dcd deoxycytidine triphosphate deaminase plu1557 155 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 37524989 Common - hypothetical protein plu0999 4 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 37527451 Common - hypothetical protein plu3582 7 None None None 37526991 Common - hypothetical protein plu3103 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 37525724 Pathogen - hypothetical protein plu1789 1 None None None 37525586 Common - hypothetical protein plu1642 47 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 37526950 Common - hypothetical protein plu3062 5 None None None 37527562 Common - hypothetical protein plu3698 18 COG1396 HipB, Predicted transcriptional regulators Transcription 37526553 Common btuC vtamin B12-transporter permease plu2662 191 COG4139 BtuC, ABC-type cobalamin transport system, permease component Coenzyme metabolism 37524175 Common - hypothetical protein plu0153 98 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 37527012 Pathogen - hypothetical protein plu3124 1 None None None 37527912 Common - hypothetical protein plu4065 200 COG0388 COG0388, Predicted amidohydrolase General function prediction only 37524596 Common lspA lipoprotein signal peptidase plu0592 197 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 37527278 Common - hypothetical protein plu3404 17 COG2369 COG2369, Uncharacterized protein, homolog of phage Mu protein gp30 Function unknown 37524561 Common yjjK putative ABC transporter ATP-binding protein plu0555 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 37527657 Pathogen - hypothetical protein plu3795 1 None None None 37527918 Common mreB Rod shape-determining protein MreB plu4071 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 37526670 Common - hypothetical protein plu2780 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 37528092 Common - hypothetical protein plu4260 117 COG0583 LysR, Transcriptional regulator Transcription 37525671 Common - hypothetical protein plu1734 7 COG4795 PulJ, Type II secretory pathway, component PulJ Intracellular trafficking and secretion 37528313 Common pyrB aspartate carbamoyltransferase catalytic subunit plu4492 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 37525659 Common - hypothetical protein plu1722 21 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37524909 Common - hypothetical protein plu0917 24 COG3423 Nlp, Predicted transcriptional regulator Transcription 37525910 Common - hypothetical protein plu1991 214 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37525375 Common ISPlu3X Transposase, IS630 family plu1421 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528433 Common insA Transposase, IS1 family plu4616 13 COG3677 COG3677, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528111 Common - hypothetical protein plu4280 75 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37524543 Common - hypothetical protein plu0537 26 None None None 37527489 Common lpdA dihydrolipoamide dehydrogenase plu3621 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 37528588 Common sbp sulfate transporter subunit plu4773 91 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 37525714 Common helD DNA helicase IV plu1779 229 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 37527283 Common ISPlu7B_orfA Transposase, IS5 ssgr, IS427 family plu3409 72 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525528 Common grxA glutaredoxin 1 plu1581 51 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 37524483 Common - hypothetical protein plu0474 206 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 37525034 Common pilL hypothetical protein plu1049 22 None None None 37525050 Common - hypothetical protein plu1065 39 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 37525649 Pathogen - hypothetical protein plu1712 5 None None None 37526315 Common ISPlu3S Transposase, IS630 family plu2419 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524442 Common secE preprotein translocase subunit SecE plu0433 54 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 37526640 Common - hypothetical protein plu2750 132 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 37525730 Common - hypothetical protein plu1796 21 None None None 37526820 Pathogen - hypothetical protein plu2930 1 None None None 37527104 Common - hypothetical protein plu3221 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525702 Common pqiB paraquat-inducible protein B plu1767 65 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 37525389 Common - hypothetical protein plu1435 163 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 37525537 Common macA macrolide transporter subunit MacA plu1590 174 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 37526810 Pathogen - hypothetical protein plu2920 3 None None None 37527323 Common - hypothetical protein plu3449 99 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 37525923 Common - hypothetical protein plu2004 11 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525635 Common - hypothetical protein plu1697 10 None None None 161579576 Common nadR nicotinamide-nucleotide adenylyltransferase plu0553 32 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 37527754 Common ribH riboflavin synthase subunit beta plu3898 229 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 37525130 Pathogen - hypothetical protein plu1162 6 None None None 37525970 Common - hypothetical protein plu2053 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 37528152 Common hsdR Type I site-specific deoxyribonuclease HsdR plu4322 135 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 37527199 Common ISPlu7C_orfA Transposase, IS5 ssgr, IS427 family plu3322 72 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527774 Common - hypothetical protein plu3918 5 None None None 37527117 Pathogen - hypothetical protein plu3234 1 None None None 37527833 Common dnaG DNA primase plu3978 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37526744 Common lysP lysine transporter plu2854 156 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 37526292 Common - hypothetical protein plu2391 7 None None None 37526503 Pathogen - hypothetical protein plu2612 1 None None None 37526041 Pathogen - hypothetical protein plu2125 1 None None None 37527009 Pathogen - hypothetical protein plu3121 1 None None None 37528499 Common ilvD dihydroxy-acid dehydratase plu4682 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 37527490 Common aceF dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (E2) plu3622 199 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 37527507 Common - zinc-binding protein plu3643 61 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 37527954 Common - hypothetical protein plu4107 14 COG3714 COG3714, Predicted membrane protein Function unknown 37526135 Pathogen - hypothetical protein plu2221 1 None None None 37526517 Common - hypothetical protein plu2626 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 37527253 Common - hypothetical protein plu3379 4 None None None 37524356 Common - hypothetical protein plu0343 3 None None None 37527847 Common - hypothetical protein plu3992 103 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 37527603 Common - hypothetical protein plu3741 180 COG1069 AraB, Ribulose kinase Energy production and conversion 37527458 Common - hypothetical protein plu3589 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37524085 Common yieM hypothetical protein plu0053 26 COG2425 COG2425, Uncharacterized protein containing a von Willebrand factor type A (vWA) domain General function prediction only 37525310 Common - hypothetical protein plu1352 4 None None None 37528410 Common - hypothetical protein plu4591 157 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 37528289 Pathogen - hypothetical protein plu4468 1 None None None 37524527 Common - hypothetical protein plu0519 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 37527382 Common - hypothetical protein plu3509 37 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 37524075 Common atpH F0F1 ATP synthase subunit delta plu0043 179 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 37525488 Common - hypothetical protein plu1541 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37524435 Common - hypothetical protein plu0426 43 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 37526911 Common - hypothetical protein plu3023 11 None None None 37527002 Common - hypothetical protein plu3114 46 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526523 Common hmuR Hemin receptor precursor plu2632 96 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 37526708 Pathogen - hypothetical protein plu2818 1 None None None 37525801 Pathogen - hypothetical protein plu1877 1 None None None 37526285 Common rnb exoribonuclease II plu2384 192 COG4776 Rnb, Exoribonuclease II Transcription 37526819 Pathogen - hypothetical protein plu2929 1 None None None 37528390 Common rpsR 30S ribosomal protein S18 plu4571 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 37524140 Pathogen - hypothetical protein plu0114 1 None None None 37526152 Common - hypothetical protein plu2239 52 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37525000 Pathogen - hypothetical protein plu1010 1 None None None 37525154 Common - hypothetical protein plu1186 64 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 37524840 Common - hypothetical protein plu0841 111 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 37526014 Common - hypothetical protein plu2097 20 COG3102 COG3102, Uncharacterized protein conserved in bacteria Function unknown 37525118 Common - hypothetical protein plu1150 40 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37525937 Common rfaZ Lipopolysaccharide core biosynthesis protein RfaZ plu2020 8 None None None 37527331 Common - hypothetical protein plu3457 16 None None None 37526996 Common astD succinylglutamic semialdehyde dehydrogenase plu3108 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37527685 Common - hypothetical protein plu3825 9 None None None 37526679 Pathogen - hypothetical protein plu2789 1 None None None 37525943 Common pgsA phosphatidylglycerophosphate synthetase plu2026 205 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 37525212 Common aroL shikimate kinase II plu1245 203 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 37527925 Common - hypothetical protein plu4078 82 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 37526592 Common - hypothetical protein plu2701 64 COG1971 COG1971, Predicted membrane protein Function unknown 37527559 Pathogen - hypothetical protein plu3695 1 None None None 37527312 Common - hypothetical protein plu3438 12 COG3566 COG3566, Uncharacterized protein conserved in bacteria Function unknown 37524131 Common pulA alpha-dextrin endo-1,6-alpha-glucosidase precursor (pullulanase precursor) plu0105 119 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 37527418 Common - hypothetical protein plu3545 111 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 37525411 Pathogen - hypothetical protein plu1459 1 None None None 37524286 Common - hypothetical protein plu0267 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37527909 Common - hypothetical protein plu4062 11 COG2732 COG2732, Barstar, RNAse (barnase) inhibitor Transcription 37527839 Pathogen - hypothetical protein plu3984 1 None None None 37528291 Common - hypothetical protein plu4470 16 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526175 Common - hypothetical protein plu2262 199 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 37527979 Common groEL chaperonin GroEL plu4134 246 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 37525463 Common - tRNA-dihydrouridine synthase C plu1512 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 37526734 Pathogen - hypothetical protein plu2844 1 None None None 37525147 Common proC pyrroline-5-carboxylate reductase plu1179 214 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 37527707 Common - hypothetical protein plu3847 100 COG1268 BioY, Uncharacterized conserved protein General function prediction only 37527058 Common dedA hypothetical protein plu3172 158 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 37524743 Pathogen - hypothetical protein plu0742 3 None None None 37524900 Common barA Sensor protein BarA plu0908 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37527500 Common ampE regulatory protein AmpE plu3636 21 COG3725 AmpE, Membrane protein required for beta-lactamase induction Defense mechanisms 37527844 Common - hypothetical protein plu3989 90 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 37525619 Common - hypothetical protein plu1681 25 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 37524153 Common ISPlu4G Transposase, IS4 family plu0127 18 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37527524 Common ftsI peptidoglycan synthetase ftsI precursor (penicillin-binding protein 3) (PBP-3) plu3660 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 37524254 Common glnG nitrogen regulation protein NR(I) plu0235 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 37525033 Common - hypothetical protein plu1048 2 None None None 37527691 Pathogen - hypothetical protein plu3831 1 None None None 37525521 Pathogen - hypothetical protein plu1574 1 None None None 37526772 Common - hypothetical protein plu2882 4 None None None 37525697 Common - hypothetical protein plu1762 38 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 37524298 Pathogen - hypothetical protein plu0280 1 None None None 37525008 Common - hypothetical protein plu1023 57 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528505 Common pssR transcriptional regulator HdfR plu4688 190 COG0583 LysR, Transcriptional regulator Transcription 37525664 Common - hypothetical protein plu1727 35 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37525095 Common - hypothetical protein plu1127 18 COG1396 HipB, Predicted transcriptional regulators Transcription 37527115 Pathogen - hypothetical protein plu3232 2 None None None 37527749 Common - hypothetical protein plu3890 38 COG2153 ElaA, Predicted acyltransferase General function prediction only 37526728 Common - hypothetical protein plu2838 55 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 37527625 Pathogen sctX Type III secretion protein SctX plu3763 5 None None None 37524502 Common - hypothetical protein plu0493 11 None None None 37526623 Common - hypothetical protein plu2733 201 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37526472 Common - hypothetical protein plu2581 42 COG3768 COG3768, Predicted membrane protein Function unknown 37526978 Common lrhA Transcriptional regulator LrhA (HexA) plu3090 145 COG0583 LysR, Transcriptional regulator Transcription 37527338 Common - hypothetical protein plu3464 5 None None None 37528330 Common - hypothetical protein plu4509 3 None None None 37525960 Common - hypothetical protein plu2043 164 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 37527601 Common aldB Aldehyde dehydrogenase B (Lactaldehyde dehydrogenase) plu3739 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37528024 Common - hypothetical protein plu4186 20 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 37524896 Common - hypothetical protein plu0904 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 37526079 Common - hypothetical protein plu2163 7 None None None 37526668 Common baeR DNA-binding response regulator in two-component regulatory system with BaeS plu2778 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37528476 Common wecC UDP-N-acetyl-D-mannosamine dehydrogenase plu4659 206 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 37526101 Common - hypothetical protein plu2185 3 None None None 37528648 Common secB preprotein translocase subunit SecB plu4839 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 37524779 Common mrfJ MrfJ protein plu0778 48 COG1396 HipB, Predicted transcriptional regulators Transcription 37526433 Common ISPlu7D_orfA Transposase, IS5 ssgr, IS427 family plu2541 72 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37528527 Common rplR 50S ribosomal protein L18 plu4710 209 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 37528489 Common - hypothetical protein plu4672 52 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37527187 Common glnB nitrogen regulatory protein P-II.1 plu3309 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 37527373 Common - hypothetical protein plu3500 13 None None None 37527219 Common rseC SoxR reducing system protein RseC plu3343 26 COG3086 RseC, Positive regulator of sigma E activity Signal transduction mechanisms 37525348 Common crr glucose-specific PTS system component plu1392 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 37526533 Common - hypothetical protein plu2642 216 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37528173 Common - hypothetical protein plu4345 2 None None None 37528356 Common - hypothetical protein plu4537 99 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 37524509 Common - hypothetical protein plu0500 17 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 37527205 Common - hypothetical protein plu3328 8 None None None 37527048 Pathogen - hypothetical protein plu3162 1 None None None 37527433 Common - hypothetical protein plu3561 195 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527158 Common fdx Ferredoxin, 2Fe-2S plu3278 80 COG0633 Fdx, Ferredoxin Energy production and conversion 37524318 Common dppB dipeptide transporter permease DppB plu0301 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 37526344 Common btuR cob(I)yrinic acid a,c-diamide adenosyltransferase plu2451 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 37525772 Common - hypothetical protein plu1841 10 None None None 37528576 Common ftsN cell division protein FtsN plu4761 30 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 37524169 Common - hypothetical protein plu0144 83 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 37527247 Common ppnK inorganic polyphosphate/ATP-NAD kinase plu3373 241 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 37524242 Pathogen - hypothetical protein plu0222 3 None None None 37525164 Common nqrA Na(+)-translocating NADH-quinone reductase subunit A plu1196 40 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 37525264 Common pbpA penicillin-binding protein 2 plu1297 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 37527183 Pathogen - hypothetical protein plu3304 1 None None None 37527965 Common glpQ glycerophosphodiester phosphodiesterase plu4120 117 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 37525789 Pathogen - hypothetical protein plu1863 1 None None None 37527019 Common - hypothetical protein plu3131 26 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37528341 Common cstA Carbon starvation protein A plu4522 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 37527677 Common ybbA putative ABC transporter ATP-binding protein YbbA plu3817 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 37526376 Common - predicted hydrolase plu2484 128 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 37524697 Common metI DL-methionine transporter permease subunit plu0696 127 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 37526159 Common - hypothetical protein plu2246 174 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37525795 Common - hypothetical protein plu1871 32 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37525428 Common modA molybdate transporter periplasmic protein plu1476 157 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 37527402 Common - hypothetical protein plu3529 36 COG3555 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases Posttranslational modification, protein turnover, chaperones 37528280 Common - hypothetical protein plu4459 6 None None None 37524814 Common uhpC Regulatory protein UhpC plu0813 115 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 37524397 Common polA DNA polymerase I plu0386 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 37528098 Common - hypothetical protein plu4266 17 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 37525700 Common uup ABC transporter ATPase component plu1765 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 37527091 Common - hypothetical protein plu3206 170 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37524962 Common - hypothetical protein plu0972 73 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37526618 Common entB isochorismatase (2,3-dihydro-2,3-dihydroxybenzoate synthetase) plu2728 70 COG1535 EntB, Isochorismate hydrolase Secondary metabolites biosynthesis, transport, and catabolism 37528374 Common msrA methionine sulfoxide reductase A plu4555 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 37524715 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase plu0714 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 37528490 Common - hypothetical protein plu4673 113 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 37527441 Common - hypothetical protein plu3569 66 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37525108 Common - hypothetical protein plu1140 4 None None None 37527234 Common - hypothetical protein plu3360 2 None None None 37528482 Common rhlB ATP-dependent RNA helicase RhlB plu4665 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 37527611 Common - hypothetical protein plu3749 5 None None None 37524954 Common tccC5 Insecticidal toxin complex protein TccC5 plu0964 32 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37528686 Pathogen - hypothetical protein plu4878 1 None None None 37528337 Common - hypothetical protein plu4516 155 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37524730 Common - hypothetical protein plu0729 26 COG3423 Nlp, Predicted transcriptional regulator Transcription 37527013 Common - hypothetical protein plu3125 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 37525858 Common - hypothetical protein plu1935 41 COG1743 COG1743, Adenine-specific DNA methylase containing a Zn-ribbon DNA replication, recombination, and repair 37524061 Common hin DNA-invertase HIN plu0029 141 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 37528037 Common - hypothetical protein plu4199 13 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 37526662 Common - hypothetical protein plu2772 98 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 37526239 Pathogen - hypothetical protein plu2337 1 None None None 37524410 Common - hypothetical protein plu0401 99 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37524845 Pathogen - hypothetical protein plu0846 1 None None None 37526166 Common ISPlu11C Transposase, IS982 family plu2253 29 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37526831 Pathogen - hypothetical protein plu2941 1 None None None 37528166 Common - hypothetical protein plu4336 36 COG3670 COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 37526611 Common - hypothetical protein plu2721 100 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 37524881 Common - hypothetical protein plu0888 8 None None None 37526795 Common - hypothetical protein plu2905 9 None None None 37524057 Common - hypothetical protein plu0025 23 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 37526207 Common - hypothetical protein plu2294 2 None None None 37528224 Common aceB malate synthase plu4396 71 COG2225 AceB, Malate synthase Energy production and conversion 37527291 Common - hypothetical protein plu3417 101 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 37525301 Common rtxC Cytolysin-activating lysine-acyltransferase RtxC plu1335 13 COG2994 HlyC, ACP:hemolysin acyltransferase (hemolysin-activating protein) Posttranslational modification, protein turnover, chaperones 37526647 Common celF 6-phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) plu2757 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 37525490 Common folE GTP cyclohydrolase I plu1543 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 37524535 Common - hypothetical protein plu0527 26 COG3220 COG3220, Uncharacterized protein conserved in bacteria Function unknown 37526113 Common - hypothetical protein plu2199 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37526858 Common - hypothetical protein plu2968 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 37526925 Common - hypothetical protein plu3037 7 None None None 37528233 Common ubiD 3-octaprenyl-4-hydroxybenzoate decarboxylase plu4405 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 37525762 Pathogen - hypothetical protein plu1829 1 None None None 37525545 Common cydD cysteine/glutathione ABC transporter membrane/ATP-binding component plu1598 246 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 37528124 Common - hypothetical protein plu4293 62 COG1396 HipB, Predicted transcriptional regulators Transcription 37526429 Common - hypothetical protein plu2537 29 None None None 37524126 Common pckA phosphoenolpyruvate carboxykinase plu0100 97 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 37525188 Common - hypothetical protein plu1220 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 37527428 Common - hypothetical protein plu3555 45 COG2938 COG2938, Uncharacterized conserved protein Function unknown 37527712 Common acrB acriflavin resistance protein B plu3852 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 37525592 Pathogen - hypothetical protein plu1651 1 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 37527421 Common lysS lysyl-tRNA synthetase plu3548 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 37527985 Common - putative transcriptional regulator plu4140 28 COG1309 AcrR, Transcriptional regulator Transcription 37527298 Common - hypothetical protein plu3424 36 COG3948 COG3948, Phage-related baseplate assembly protein General function prediction only 37526226 Common - hypothetical protein plu2318 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37526125 Common - hypothetical protein plu2211 11 None None None 37524469 Common malG maltose transporter permease plu0460 173 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 37526366 Common ISPlu16B Transposase, IS630 family plu2473 58 COG3335 COG3335, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525207 Common pepD aminoacyl-histidine dipeptidase (XAA-His dipeptidase) (beta-alanyl-histidine dipeptidase) (carnosinase) (peptidase D) plu1240 63 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 37526695 Common - hypothetical protein plu2805 41 COG2915 COG2915, Uncharacterized protein involved in purine metabolism General function prediction only 37527195 Common purL phosphoribosylformylglycinamidine synthase plu3317 233 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 37528637 Common wblY WblY protein plu4824 208 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 37525991 Common - putative sulfate transporter YchM plu2074 159 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 37528692 Common - hypothetical protein plu4884 6 None None None 37524803 Common - hypothetical protein plu0802 13 COG1309 AcrR, Transcriptional regulator Transcription 37527268 Common - hypothetical protein plu3394 2 None None None 37527210 Common - hypothetical protein plu3333 8 None None None 37524180 Common - hypothetical protein plu0158 22 COG1834 COG1834, N-Dimethylarginine dimethylaminohydrolase Amino acid transport and metabolism 37524437 Common - hypothetical protein plu0428 27 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 37524461 Common - UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase plu0452 114 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37524534 Pathogen - hypothetical protein plu0526 1 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 37525472 Pathogen - hypothetical protein plu1523 1 None None None 37527378 Common - hypothetical protein plu3505 113 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 37528100 Common - hypothetical protein plu4268 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 37525191 Common - hypothetical protein plu1224 27 COG4679 COG4679, Phage-related protein Function unknown 37527634 Common sctS Type III secretion component protein SctS plu3772 119 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 37524293 Common gmk guanylate kinase plu0274 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 37527273 Common - hypothetical protein plu3399 2 None None None 37528014 Pathogen - hypothetical protein plu4176 2 None None None 37528176 Common - hypothetical protein plu4348 9 None None None 37528327 Common ubiA prenyltransferase plu4506 4 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 37527765 Common brnQ branched chain amino acid transport system II carrier protein plu3909 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 37524302 Common - hypothetical protein plu0284 32 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37524717 Common surE stationary phase survival protein SurE plu0716 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 37527668 Common lpxH UDP-2,3-diacylglucosamine hydrolase plu3806 92 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 37528318 Common pyrI aspartate carbamoyltransferase regulatory subunit plu4497 64 COG1781 PyrI, Aspartate carbamoyltransferase, regulatory subunit Nucleotide transport and metabolism 37526685 Common - hypothetical protein plu2795 199 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 37524113 Common dam DNA adenine methylase plu0087 99 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 37525675 Common - hypothetical protein plu1738 73 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 37524130 Common - hypothetical protein plu0104 30 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 37524190 Common - hypothetical protein plu0168 66 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 37525602 Common - hypothetical protein plu1661 8 None None None 37525890 Common dsdC DNA-binding transcriptional dual regulator plu1968 164 COG0583 LysR, Transcriptional regulator Transcription 37524404 Common crp cAMP-regulatory protein plu0395 170 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 37526302 Common - hypothetical protein plu2401 6 None None None 37526872 Common - hypothetical protein plu2982 2 None None None 37528065 Common - hypothetical protein plu4229 97 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37524935 Common dnaQ DNA polymerase III subunit epsilon plu0943 184 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 37526957 Common menE O-succinylbenzoic acid--CoA ligase plu3069 206 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37525966 Common - hypothetical protein plu2049 10 None None None 37524212 Common - hypothetical protein plu0191 8 None None None 37528642 Pathogen - hypothetical protein plu4833 1 None None None 37528230 Common fadB multifunctional fatty acid oxidation complex subunit alpha plu4402 190 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 37526981 Common - hypothetical protein plu3093 133 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 37527470 Common - hypothetical protein plu3602 41 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 37525101 Common - hypothetical protein plu1133 3 None None None 37527398 Pathogen - hypothetical protein plu3525 1 None None None 37527350 Common - hypothetical protein plu3477 5 None None None 37525469 Common - hypothetical protein plu1518 5 None None None 37528616 Common wblG WblG protein plu4803 85 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37526842 Common - hypothetical protein plu2952 40 COG3617 COG3617, Prophage antirepressor Transcription 37525341 Common - hypothetical protein plu1385 25 COG3111 COG3111, Uncharacterized conserved protein Function unknown 37528057 Common - hypothetical protein plu4221 4 None None None 37528408 Common - hypothetical protein plu4589 192 COG0583 LysR, Transcriptional regulator Transcription 37524692 Common cutF lipoprotein involved with copper homeostasis and adhesion plu0691 23 COG3015 CutF, Uncharacterized lipoprotein NlpE involved in copper resistance Cell envelope biogenesis, outer membrane / Inorganic ion transport and metabolism 37528164 Common - hypothetical protein plu4334 2 None None None 37525819 Common flhA flagellar biosynthesis protein A plu1896 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 37526278 Common rnfA Na(+)-translocating NADH-quinone reductase subunit E plu2377 76 COG4657 RnfA, Predicted NADH:ubiquinone oxidoreductase, subunit RnfA Energy production and conversion 37528133 Common - hypothetical protein plu4302 28 COG3817 COG3817, Predicted membrane protein Function unknown 37528066 Pathogen - hypothetical protein plu4230 5 None None None 37524608 Common folA dihydrofolate reductase plu0606 147 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 37526271 Common - hypothetical protein plu2369 9 None None None 37525980 Pathogen - hypothetical protein plu2063 2 None None None 37528362 Common ispB octaprenyl diphosphate synthase plu4543 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 37526050 Common fadD long-chain-fatty-acid--CoA ligase plu2134 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37526808 Pathogen - hypothetical protein plu2918 1 COG1414 IclR, Transcriptional regulator Transcription 37528229 Common pepQ Xaa-Pro dipeptidase (X-Pro dipeptidase) (proline dipeptidase) (prolidase) (imidodipeptidase) plu4401 175 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 37525017 Common - hypothetical protein plu1032 23 None None None 37527593 Common - hypothetical protein plu3731 178 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 37525043 Common pilV hypothetical protein plu1058 14 None None None 37526943 Common - hypothetical protein plu3055 5 None None None 37525932 Common - hypothetical protein plu2013 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37528618 Common wblI WblI protein plu4805 80 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37525581 Common mukF condesin subunit F plu1637 19 COG3006 MukF, Uncharacterized protein involved in chromosome partitioning Cell division and chromosome partitioning 37527443 Pathogen - hypothetical protein plu3573 2 None None None 37527592 Common - hypothetical protein plu3730 24 COG3423 Nlp, Predicted transcriptional regulator Transcription 37528031 Common - hypothetical protein plu4193 5 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 37528308 Common - hypothetical protein plu4487 183 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 37526512 Common sufB cysteine desulfurase activator complex subunit SufB plu2621 187 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 37526326 Common ribA GTP cyclohydrolase II plu2431 192 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 37525976 Pathogen - hypothetical protein plu2059 1 None None None 37526654 Common ppx exopolyphosphatase plu2764 180 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 37525024 Common - hypothetical protein plu1039 210 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 37524170 Common - hypothetical protein plu0145 171 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 37525062 Pathogen - hypothetical protein plu1081 5 None None None 37528710 Common - hypothetical protein plu4904 70 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 37526128 Pathogen - hypothetical protein plu2214 1 None None None 37525222 Common - hypothetical protein plu1255 56 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 37524915 Common - hypothetical protein plu0923 9 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524143 Common - hypothetical protein plu0117 21 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 37527789 Common - hypothetical protein plu3934 18 COG3664 XynB, Beta-xylosidase Carbohydrate transport and metabolism 37524860 Common - hypothetical protein plu0865 73 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 37524401 Common - hypothetical protein plu0392 9 None None None 37525218 Common csrA carbon storage regulator plu1251 81 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 37525799 Common - hypothetical protein plu1875 20 None None None 37525721 Common - hypothetical protein plu1786 60 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 37524828 Pathogen - hypothetical protein plu0829 1 None None None 37524219 Common - predicted gluconate transport-associated protein plu0198 67 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 37527802 Common sufI repressor protein for FtsI plu3947 83 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 37526570 Common - hypothetical protein plu2679 37 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 37527317 Common - hypothetical protein plu3443 16 None None None 37524364 Pathogen - hypothetical protein plu0351 2 None None None 37524204 Common cpmA CpmA protein involved in carbapenem biosynthesis plu0182 120 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 37527366 Pathogen - hypothetical protein plu3493 2 None None None 37524685 Common lpxA UDP-N-acetylglucosamine acyltransferase plu0684 158 COG1043 LpxA, Acyl- acyl carrier protein 37526022 Common - hypothetical protein plu2106 30 COG3788 COG3788, Uncharacterized relative of glutathione S-transferase, MAPEG superfamily General function prediction only 37526461 Common - hypothetical protein plu2569 8 None None None 37524702 Common - hypothetical protein plu0701 168 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 37526232 Common - hypothetical protein plu2324 233 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 37527296 Common - hypothetical protein plu3422 10 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37528667 Pathogen rfaL O-antigen ligase RfaL plu4858 4 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 37525841 Common flgE flagellar hook protein FlgE plu1918 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 37525400 Pathogen - hypothetical protein plu1446 1 None None None 37526764 Common - hypothetical protein plu2874 19 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37525491 Common - hypothetical protein plu1544 43 COG2311 COG2311, Predicted membrane protein Function unknown 37524328 Common - hypothetical protein plu0311 3 None None None 37527375 Common - hypothetical protein plu3502 4 None None None 37525018 Common - hypothetical protein plu1033 12 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 37528628 Common ISplu3A Transposase, IS630 family plu4815 29 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524426 Common - hypothetical protein plu0417 8 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37528553 Common trmA tRNA (uracil-5-)-methyltransferase plu4736 181 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 37528222 Common aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein plu4394 29 COG4579 COG4579, Isocitrate dehydrogenase kinase/phosphatase Signal transduction mechanisms 37526044 Common - hypothetical protein plu2128 92 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 37527853 Common - hypothetical protein plu3998 154 COG0583 LysR, Transcriptional regulator Transcription 37528596 Common - hypothetical protein plu4781 31 COG4679 COG4679, Phage-related protein Function unknown 37525061 Common - hypothetical protein plu1080 11 None None None 37524764 Pathogen - hypothetical protein plu0763 1 None None None 37525069 Common - hypothetical protein plu1088 22 None None None 37524566 Common rob right origin-binding protein plu0560 58 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37525887 Common - D-alanine/D-serine/glycine permease plu1965 118 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 37525519 Common - hypothetical protein plu1572 112 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 37526213 Common - hypothetical protein plu2300 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 37526006 Common - multidrug resistance protein MdtH plu2089 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525283 Common nagB glucosamine-6-phosphate deaminase plu1317 88 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 37525880 Common putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase plu1957 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 37527499 Common - hypothetical protein plu3631 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37524555 Common - hypothetical protein plu0549 47 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37528708 Common - hypothetical protein plu4902 5 None None None 37527461 Pathogen - hypothetical protein plu3592 3 None None None 37526384 Common oppB oligopeptide transporter permease plu2492 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 37527582 Common - hypothetical protein plu3719 41 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37527165 Common - hypothetical protein plu3285 155 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 37526780 Common - hypothetical protein plu2890 3 None None None 37524576 Common - chorismate mutase plu0570 10 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 37524790 Common - hypothetical protein plu0789 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37527718 Common mdlB putative multidrug transporter membrane\ATP-binding components plu3858 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37525812 Pathogen - hypothetical protein plu1888 2 None None None 37524399 Common engB GTPase EngB plu0390 181 COG0218 COG0218, Predicted GTPase General function prediction only 37527994 Common ISPlu3F Transposase, IS630 family plu4150 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526337 Common - hypothetical protein plu2442 48 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37526142 Pathogen - hypothetical protein plu2228 1 None None None 37527977 Common - hypothetical protein plu4132 16 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 37526222 Common ISPlu3T Transposase, IS630 family plu2314 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526867 Pathogen - hypothetical protein plu2977 3 None None None 37525392 Common - hypothetical protein plu1438 206 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 37528245 Common udp uridine phosphorylase plu4417 100 COG2820 Udp, Uridine phosphorylase Nucleotide transport and metabolism 37525250 Common proV Glycine betaine/L-proline transport ATP-binding protein proV plu1283 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 37526762 Common - hypothetical protein plu2872 32 COG3083 COG3083, Predicted hydrolase of alkaline phosphatase superfamily General function prediction only 37528531 Common rplE 50S ribosomal protein L5 plu4714 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 37525324 Common - hypothetical protein plu1368 42 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 37528075 Common ppxA photopexin A plu4242 8 None None None 37527642 Pathogen sctE Type III secretion component protein SctE plu3780 3 None None None 37528453 Common uvrD DNA-dependent helicase II plu4636 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 37524709 Common cysG sirohaem synthase plu0708 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 37524990 Common - hypothetical protein plu1000 80 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 37527083 Common - hypothetical protein plu3198 69 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 37524344 Pathogen - hypothetical protein plu0331 1 None None None 37526468 Common zntB zinc transporter plu2577 87 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 37524997 Pathogen - hypothetical protein plu1007 1 None None None 37526840 Pathogen - hypothetical protein plu2950 1 None None None 37528425 Common - hypothetical protein plu4606 20 COG4104 COG4104, Uncharacterized conserved protein Function unknown 37525909 Common - hypothetical protein plu1989 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 37526575 Common - hypothetical protein plu2684 83 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 37525905 Common - hypothetical protein plu1983 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527155 Common - hypothetical protein plu3275 12 None None None 37525557 Common pflA pyruvate formate lyase-activating enzyme 1 plu1612 103 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 37525895 Common - hypothetical protein plu1973 17 None None None 37526149 Common - hypothetical protein plu2236 69 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 37527480 Common - arginine exporter protein plu3612 82 COG1279 COG1279, Lysine efflux permease General function prediction only 37527241 Pathogen - hypothetical protein plu3367 1 None None None 37524520 Common - hypothetical protein plu0511 59 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 37526255 Common - hypothetical protein plu2353 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 37527961 Common - hypothetical protein plu4116 3 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 37525912 Common fruA fructose-specific PTS system IIBC component plu1993 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 37526053 Common minD cell division inhibitor MinD plu2137 143 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 37526548 Common pbgP4 PbgP4 protein plu2657 20 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 37526414 Pathogen - hypothetical protein plu2522 1 None None None 37525355 Common nupC nucleoside permease NupC plu1399 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 37525077 Common - hypothetical protein plu1096 25 COG3423 Nlp, Predicted transcriptional regulator Transcription 37527797 Common metC cystathionine beta-lyase plu3942 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 37526312 Common - hypothetical protein plu2412 9 None None None 37525295 Common - LexA regulated protein plu1329 21 None None None 37526849 Common - hypothetical protein plu2959 9 None None None 37527949 Common ftsX cell division protein FtsX plu4102 124 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 37526458 Common - hypothetical protein plu2566 139 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 37524090 Common rbsB D-ribose transporter subunit RbsB plu0058 129 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 37526908 Common - hypothetical protein plu3020 4 None None None 37526482 Common sapF Peptide transport system ATP-binding protein SapF plu2591 249 COG4167 SapF, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 37527574 Pathogen - hypothetical protein plu3711 1 None None None 37527259 Pathogen - hypothetical protein plu3385 1 None None None 37528147 Common - hypothetical protein plu4316 24 COG2501 COG2501, Uncharacterized conserved protein Function unknown 37526969 Common nuoJ NADH dehydrogenase subunit J plu3081 26 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 37526347 Common - hypothetical protein plu2454 7 None None None 37524924 Common - hypothetical protein plu0932 2 COG1156 NtpB, Archaeal/vacuolar-type H+-ATPase subunit B Energy production and conversion 37528158 Common - hypothetical protein plu4328 6 None None None 37524641 Pathogen - hypothetical protein plu0640 1 None None None 37526936 Common rcsB DNA-binding response regulator in two-component regulatory system with RcsC and YojN plu3048 170 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37524151 Common - hypothetical protein plu0125 110 COG0582 XerC, Integrase DNA replication, recombination, and repair 37524677 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase plu0676 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 37524776 Common mrfF MrfF protein plu0775 8 None None None 37528277 Common - hypothetical protein plu4454 5 None None None 37528140 Common - hypothetical protein plu4309 54 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 37526356 Common trpG Anthranilate synthase component II (Glutamine amido-transferase) plu2463 229 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 37527309 Common - hypothetical protein plu3435 15 COG4387 COG4387, Mu-like prophage protein gp36 Function unknown 37525454 Common - hypothetical protein plu1503 95 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 37528515 Common trkA potassium transporter peripheral membrane component plu4698 146 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 37526098 Common - hypothetical protein plu2182 208 COG0546 Gph, Predicted phosphatases General function prediction only 37525561 Common ansB L-asparaginase II plu1616 134 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 37525276 Common corC Magnesium and cobalt efflux protein CorC plu1309 218 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 37527229 Pathogen - hypothetical protein plu3355 2 None None None 37524807 Common tccB3 Insecticidal toxin complex protein TccB3 plu0806 10 None None None 37525129 Pathogen - hypothetical protein plu1161 1 COG4227 COG4227, Antirestriction protein DNA replication, recombination, and repair 37524492 Common thiS sulfur carrier protein ThiS plu0483 18 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 37526752 Pathogen - hypothetical protein plu2862 2 None None None 37527863 Common arcB aerobic respiration control sensor protein ArcB plu4008 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37524582 Common - hypothetical protein plu0578 49 COG1584 COG1584, Predicted membrane protein Function unknown 37527910 Common - hypothetical protein plu4063 10 COG4290 COG4290, Guanyl-specific ribonuclease Sa Nucleotide transport and metabolism 37526087 Common ureA urease subunit gamma plu2171 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 37526568 Common - hypothetical protein plu2677 13 None None None 37528632 Common wblT WblT protein plu4819 127 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37525824 Pathogen - hypothetical protein plu1901 1 None None None 37528190 Common ISPlu3E Transposase, IS630 family plu4362 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525317 Common xerC site-specific tyrosine recombinase XerC plu1359 223 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37528216 Common - hypothetical protein plu4388 3 None None None 37526886 Common cbiD cobalt-precorrin-6A synthase plu2996 93 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 37524266 Common - hypothetical protein plu0247 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 37526901 Common - hypothetical protein plu3013 17 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37526447 Common pncA nicotinamidase/pyrazinamidase plu2555 112 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 37527124 Common - hypothetical protein plu3241 23 COG3673 COG3673, Uncharacterized conserved protein Function unknown 37527641 Common sctD Type III secretion component protein SctD plu3779 8 None None None 37526393 Common galU UTP--glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase) (UDPGP) plu2501 230 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 37527614 Pathogen - hypothetical protein plu3752 1 None None None 37525048 Pathogen - hypothetical protein plu1063 1 None None None 37525953 Common - hypothetical protein plu2036 9 None None None 37525185 Common - hypothetical protein plu1217 48 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 37524654 Common - hypothetical protein plu0653 66 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 37525249 Common proW glycine betaine transporter membrane protein plu1282 219 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 37525512 Common hisF imidazole glycerol phosphate synthase subunit HisF plu1565 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 37524378 Common - hypothetical protein plu0367 19 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 37526189 Pathogen - hypothetical protein plu2276 1 None None None 37525629 Pathogen - hypothetical protein plu1691 1 None None None 37528195 Common - hypothetical protein plu4367 34 COG2944 COG2944, Predicted transcriptional regulator Transcription 37525448 Common ISPlu10H Transposase, IS630 family plu1497 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526180 Pathogen - hypothetical protein plu2267 1 None None None 37528603 Common - hypothetical protein plu4790 172 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37527003 Common - hypothetical protein plu3115 67 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37526715 Common - purine nucleoside phosphoramidase plu2825 229 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 37527970 Common frdB fumarate reductase iron-sulfur subunit plu4125 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 37525099 Common - hypothetical protein plu1131 6 None None None 37525211 Common proA gamma-glutamyl phosphate reductase plu1244 190 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 37525460 Common ybhG hypothetical protein plu1509 133 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 37527782 Common cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein plu3927 125 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 37528300 Common - hypothetical protein plu4479 100 COG0795 COG0795, Predicted permeases General function prediction only 37526325 Common - hypothetical protein plu2429 21 COG3771 COG3771, Predicted membrane protein Function unknown 37525052 Common - hypothetical protein plu1067 5 None None None 37524627 Common ppdA hypothetical protein plu0626 9 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 37528387 Common - hypothetical protein plu4568 221 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 37525601 Common - hypothetical protein plu1660 32 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37527817 Common - hypothetical protein plu3962 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 37524503 Common purD phosphoribosylamine--glycine ligase plu0494 232 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 37526072 Common - hypothetical protein plu2156 17 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37525650 Pathogen - hypothetical protein plu1713 1 None None None 37524882 Pathogen - hypothetical protein plu0890 2 None None None 37525331 Common - hypothetical protein plu1375 54 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 37525240 Pathogen - hypothetical protein plu1273 1 None None None 37524199 Common kdgK 2-dehydro-3-deoxygluconokinase (2-keto-3-deoxygluconokinase) (3-deoxy-2-OXO-D-gluconate kinase) (KDG kinase) plu0177 115 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 37524813 Common afuA Periplasmic ferric iron-binding protein AfuA plu0812 119 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 37524475 Common - hypothetical protein plu0466 7 None None None 37525084 Common - hypothetical protein plu1111 94 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 37524251 Pathogen - hypothetical protein plu0232 1 None None None 37525481 Common - hypothetical protein plu1533 104 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 37525988 Common hemK N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase plu2071 214 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 37526143 Common - hypothetical protein plu2230 7 COG5555 COG5555, Cytolysin, a secreted calcineurin-like phosphatase Cell motility and secretion 37526265 Pathogen - hypothetical protein plu2363 1 None None None 37525140 Common - glutaminase plu1172 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 37528397 Common hflC FtsH protease regulator HflC plu4578 147 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 37528435 Common - predicted hydrolase plu4618 114 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 37528557 Common oxyR DNA-binding transcriptional regulator OxyR plu4740 193 COG0583 LysR, Transcriptional regulator Transcription 37524735 Common - hypothetical protein plu0734 17 None None None 37526879 Common cbiK Cobalt chelatase plu2989 25 COG4822 CbiK, Cobalamin biosynthesis protein CbiK, Co2+ chelatase Coenzyme metabolism 37525153 Common - hypothetical protein plu1185 195 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 37525554 Common ISPlu1E Transposase, IS30 family plu1609 64 COG2826 Tra8, Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair 37524350 Common - hypothetical protein plu0337 19 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 37525572 Common - hypothetical protein plu1628 5 None None None 37527119 Common - hypothetical protein plu3236 9 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 37527074 Common aroC chorismate synthase plu3189 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 37528266 Common ISPlu10A Transposase, IS630 family plu4442 58 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525835 Common flgN Flagella synthesis protein FlgN plu1912 13 COG3418 COG3418, Flagellar biosynthesis/type III secretory pathway chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 37525787 Common cheZ chemotaxis regulator CheZ plu1858 44 COG3143 CheZ, Chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 37524690 Common tilS tRNA(Ile)-lysidine synthetase plu0689 213 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 37525252 Common nrdE ribonucleotide-diphosphate reductase subunit alpha plu1285 217 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 37524037 Common - hypothetical protein plu0005 28 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 37526246 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase plu2344 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 37524226 Common - hypothetical protein plu0206 19 COG1476 COG1476, Predicted transcriptional regulators Transcription 37526501 Common ribE riboflavin synthase subunit alpha plu2610 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 37526710 Common - hypothetical protein plu2820 58 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 37527719 Common mdlA putative multidrug transporter membrane\ATP-binding components plu3859 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37525722 Common - hypothetical protein plu1787 3 None None None 37527178 Pathogen - hypothetical protein plu3298 1 None None None 37525687 Common - hypothetical protein plu1752 26 COG3203 OmpC, Outer membrane protein (porin) Cell envelope biogenesis, outer membrane 37527846 Common - hypothetical protein plu3991 92 COG3633 SstT, Na+/serine symporter Amino acid transport and metabolism 37528027 Common - hypothetical protein plu4189 4 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37526139 Common - hypothetical protein plu2225 162 COG0583 LysR, Transcriptional regulator Transcription 37527301 Common - hypothetical protein plu3427 38 COG3500 COG3500, Phage protein D General function prediction only 37524087 Common rbsD High affinity ribose transport protein RbsD plu0055 47 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 37525284 Common nagE PTS system, N-acetylglucosamine-specific IIABC component (EIIABC-NAG) (N-acetylglucosamine-permease IIABC component) (Phosphotransferase enzyme II, ABC component) (EII-NAG) plu1318 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 37524063 Pathogen - hypothetical protein plu0031 3 None None None 37525476 Common dkgB 2,5-diketo-D-gluconate reductase B plu1527 175 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 37528018 Common - hypothetical protein plu4180 80 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37524335 Common - hypothetical protein plu0320 47 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525803 Common - hypothetical protein plu1879 166 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527217 Common lepB lsignal peptidase I plu3341 196 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 37527384 Common - hypothetical protein plu3511 53 COG0456 RimI, Acetyltransferases General function prediction only 37528466 Common ISPlu4A Transposase, IS4 family plu4649 19 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37524745 Common - hypothetical protein plu0744 19 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37526817 Pathogen - hypothetical protein plu2927 1 None None None 37526133 Pathogen - hypothetical protein plu2219 2 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524599 Common - hypothetical protein plu0597 11 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 37524658 Common prtB ATP-binding protein PrtB plu0657 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 37527151 Common - hypothetical protein plu3271 9 None None None 37524634 Common RecD exonuclease V subunit alpha plu0633 133 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 37528154 Common - hypothetical protein plu4324 16 None None None 37527891 Common - hypothetical protein plu4039 59 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 37524902 Common relA GDP/GTP pyrophosphokinase plu0910 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 37528005 Common tccC1 Insecticidal toxin complex protein TccC1 plu4167 47 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37527522 Common murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase plu3658 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 37525739 Common - hypothetical protein plu1805 221 COG3962 COG3962, Acetolactate synthase Amino acid transport and metabolism 37527927 Pathogen - hypothetical protein plu4080 4 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37527998 Common ISPlu2B Transposase, IS200 family plu4158 74 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527921 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit plu4074 196 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 37526435 Pathogen - hypothetical protein plu2543 2 None None None 37526173 Common - beta alanine--pyruvate transaminase plu2260 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 37525617 Common - hypothetical protein plu1679 10 None None None 37527787 Common - hypothetical protein plu3932 8 COG2253 COG2253, Uncharacterized conserved protein Function unknown 37527333 Pathogen - hypothetical protein plu3459 1 None None None 37528272 Common fecD iron-dicitrate transporter subunit FecD plu4449 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 37525941 Common - hypothetical protein plu2024 12 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37526998 Common argD bifunctional succinylornithine transaminase/acetylornithine transaminase plu3110 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 37527144 Common - hypothetical protein plu3262 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 37528231 Common fadA 3-ketoacyl-CoA thiolase plu4403 170 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 37528106 Common - hypothetical protein plu4274 112 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 37524142 Common - hypothetical protein plu0116 87 COG0439 AccC, Biotin carboxylase Lipid metabolism 37524783 Common - hypothetical protein plu0782 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37527310 Common - hypothetical protein plu3436 6 None None None 37524529 Common deoB phosphopentomutase plu0521 70 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 37525948 Common - hypothetical protein plu2031 5 None None None 37527693 Common gsk Inosine-guanosine kinase plu3833 58 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 37526621 Pathogen - hypothetical protein plu2731 1 None None None 37527687 Common - hypothetical protein plu3827 110 COG2606 EbsC, Uncharacterized conserved protein Function unknown 37527725 Common ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) plu3865 151 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 37525614 Common - hypothetical protein plu1676 10 None None None 37525056 Common ISPlu9I Transposase, IS4 Familly plu1072 26 None None None 37525699 Common - hypothetical protein plu1764 156 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 37526584 Common - hypothetical protein plu2693 16 COG3140 COG3140, Uncharacterized protein conserved in bacteria Function unknown 37528399 Common hflX putative GTPase HflX plu4580 227 COG2262 HflX, GTPases General function prediction only 37526490 Common slyB Outer membrane lipoprotein SlyB precursor plu2599 19 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 37524740 Common - hypothetical protein plu0739 46 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37526701 Common cobB NAD-dependent deacetylase plu2811 150 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 37527035 Common lsrG autoinducer-2 (AI-2) modifying protein LsrG plu3148 24 COG1359 COG1359, Uncharacterized conserved protein Function unknown 37525979 Pathogen - hypothetical protein plu2062 1 None None None 37527849 Common - hypothetical protein plu3994 18 COG4575 ElaB, Uncharacterized conserved protein Function unknown 37524045 Common - hypothetical protein plu0013 16 None None None 37524439 Common rpsG 30S ribosomal protein S7 plu0430 237 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 37527505 Common coaE dephospho-CoA kinase plu3641 205 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 37526895 Pathogen - hypothetical protein plu3007 1 None None None 37526719 Common - hypothetical protein plu2829 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 37525837 Common flgA Flagella basal body P-ring formation protein FlgA precursor plu1914 40 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 37524221 Common - tyrosyl-tRNA synthetase plu0201 242 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37525839 Common flgC flagellar basal body rod protein FlgC plu1916 126 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 37525036 Common pilN hypothetical protein plu1051 15 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 37525271 Common gltL Glutamate/aspartate transport ATP-binding protein GltL plu1304 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 37525983 Common prsA ribose-phosphate pyrophosphokinase plu2066 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 37525986 Common hemA glutamyl-tRNA reductase plu2069 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 37525014 Common - hypothetical protein plu1029 102 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526829 Common - hypothetical protein plu2939 6 None None None 37526420 Common - hypothetical protein plu2528 34 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 37525097 Pathogen - hypothetical protein plu1129 3 None None None 37526786 Common - hypothetical protein plu2896 3 COG4834 COG4834, Uncharacterized protein conserved in bacteria Function unknown 37528646 Common cysE serine acetyltransferase plu4837 210 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 37524386 Common gor glutathione reductase plu0375 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 37525011 Pathogen - hypothetical protein plu1026 1 None None None 37528321 Common nrdG anaerobic ribonucleotide reductase-activating protein plu4500 63 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 37527497 Pathogen - hypothetical protein plu3629 1 None None None 37526510 Common sufD cysteine desulfurase activator complex subunit SufD plu2619 173 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 37525684 Common - hypothetical protein plu1749 224 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 37528113 Common - hypothetical protein plu4282 10 COG3668 ParE, Plasmid stabilization system protein General function prediction only 161579565 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase plu3648 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 37527987 Common mcf Mcf protein plu4142 5 None None None 37526796 Pathogen - hypothetical protein plu2906 1 None None None 37524177 Common - hypothetical protein plu0155 112 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 37525885 Common - hypothetical protein plu1962 3 None None None 37526551 Common pbgP1 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase plu2660 197 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 37526483 Common fabI enoyl-(acyl carrier protein) reductase plu2592 227 COG0623 FabI, Enoyl- acyl-carrier-protein 37528345 Common rpsO 30S ribosomal protein S15 plu4526 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 37527129 Common - hypothetical protein plu3246 52 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37526368 Common - hypothetical protein plu2475 40 COG2319 COG2319, FOG: WD40 repeat General function prediction only 37526959 Common menB naphthoate synthase plu3071 179 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 37527741 Common - nucleotide-binding protein plu3881 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 37526677 Common - hypothetical protein plu2787 138 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37524467 Common malE maltose ABC transporter periplasmic protein plu0458 89 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 37526526 Common - hypothetical protein plu2635 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 37526993 Common - hypothetical protein plu3105 100 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 37527281 Common - hypothetical protein plu3407 7 COG3728 XtmA, Phage terminase, small subunit DNA replication, recombination, and repair 37526091 Common ureF urease accessory protein plu2175 66 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 37524772 Common mrfC Outer membrane usher protein MrfC plu0771 30 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 37525647 Pathogen - hypothetical protein plu1709 1 None None None 37525102 Pathogen - hypothetical protein plu1134 1 None None None 161579574 Common - hypothetical protein plu1254 218 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 37527569 Common - hypothetical protein plu3705 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37527531 Common - hypothetical protein plu3667 5 None None None 37524661 Common xni exonuclease IX plu0660 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 37524943 Pathogen - hypothetical protein plu0951 1 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 37524485 Common - hypothetical protein plu0476 70 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 37525075 Pathogen - hypothetical protein plu1094 1 None None None 37527663 Common - hypothetical protein plu3801 11 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37526310 Pathogen - hypothetical protein plu2410 1 None None None 37524590 Pathogen - hypothetical protein plu0586 4 None None None 37526918 Common - hypothetical protein plu3030 14 None None None 37524953 Common tciR2 hypothetical protein plu0963 76 COG0583 LysR, Transcriptional regulator Transcription 37525704 Common rmf ribosome modulation factor (protein E) plu1769 21 COG3130 Rmf, Ribosome modulation factor Translation, ribosomal structure and biogenesis 37528339 Common ISPlu7A_orfA Transposase, IS5 ssgr, IS427 family plu4519 72 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525584 Common - hypothetical protein plu1640 2 None None None 37525289 Common - hypothetical protein plu1323 20 COG3435 COG3435, Gentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37525539 Common cspD cold shock protein plu1592 174 COG1278 CspC, Cold shock proteins Transcription 37524945 Common epd D-erythrose 4-phosphate dehydrogenase plu0955 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 37525712 Common - hypothetical protein plu1777 34 COG3070 TfoX, Regulator of competence-specific genes Transcription 37527438 Common - hypothetical protein plu3566 211 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 37527835 Common - hypothetical protein plu3980 36 COG3617 COG3617, Prophage antirepressor Transcription 37528315 Common ISPlu9A Transposase, IS4 family plu4494 26 None None None 37525132 Pathogen - hypothetical protein plu1164 1 None None None 37525571 Common - hypothetical protein plu1627 5 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 37527017 Pathogen - hypothetical protein plu3129 1 None None None 37527546 Pathogen - hypothetical protein plu3682 1 None None None 37524816 Common uhpA Two-component response regulator. Hexose phosphate transport system regulatory protein UhpA. plu0815 205 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525022 Common - DNA topoisomerase III plu1037 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 37525891 Common dsdX DsdX permease plu1969 81 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 37524545 Common - hypothetical protein plu0539 13 None None None 37527931 Common - hypothetical protein plu4084 208 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37528020 Common tccC6 Insecticidal toxin complex protein TccC6 plu4182 32 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 37524728 Common - hypothetical protein plu0727 36 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 37525660 Common - hypothetical protein plu1723 26 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37524244 Pathogen - hypothetical protein plu0224 2 None None None 37528683 Pathogen - hypothetical protein plu4875 1 None None None 37527815 Common - hypothetical protein plu3960 10 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37525653 Common - hypothetical protein plu1716 247 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 37526224 Common - hypothetical protein plu2316 122 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 37525760 Common - hypothetical protein plu1827 16 None None None 37525089 Common - hypothetical protein plu1121 4 None None None 37524182 Common - hypothetical protein plu0160 7 None None None 37527120 Common - hypothetical protein plu3237 52 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37528366 Common mdh malate dehydrogenase plu4547 177 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 37525740 Common - hypothetical protein plu1806 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37524864 Common yadH ABC transporter, integral membrane protein YadH plu0869 150 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 37524767 Pathogen - hypothetical protein plu0766 1 None None None 37528688 Common - hypothetical protein plu4880 96 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37528376 Common - hypothetical protein plu4557 14 None None None 37527131 Pathogen - hypothetical protein plu3248 3 None None None 37524470 Common - hypothetical protein plu0461 39 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 37525315 Pathogen - hypothetical protein plu1357 1 None None None 37526923 Common - hypothetical protein plu3035 7 None None None 37524077 Common atpE F0F1 ATP synthase subunit C plu0045 50 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 37524960 Common tcdA2 Insecticidal toxin complex protein TcdA2 plu0970 12 None None None 37526237 Common - hypothetical protein plu2330 3 None None None 37528392 Common rpsF 30S ribosomal protein S6 plu4573 193 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 37524162 Common - hypothetical protein plu0136 13 None None None 37524127 Common - hypothetical protein plu0101 143 COG1741 COG1741, Pirin-related protein General function prediction only 37525209 Common frsA fermentation/respiration switch protein plu1242 23 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 37525769 Common - hypothetical protein plu1836 7 None None None 37524133 Common - hypothetical protein plu0107 15 None None None 37524530 Common deoD purine nucleoside phosphorylase plu0522 91 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 37526549 Common pbgP3 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase plu2658 245 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 37525303 Common - hypothetical protein plu1341 99 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 37526732 Common - hypothetical protein plu2842 52 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37525993 Common - hypothetical protein plu2076 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 37526645 Common celB PTS system, cellobiose-specific IIC component (CelB) plu2755 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 37526150 Common - hypothetical protein plu2237 57 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 37527078 Common hutU urocanate hydratase plu3193 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 37525879 Common fliZ protein FliZ plu1956 9 None None None 37524232 Common ompR osmolarity response regulator plu0212 221 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37528419 Common - hypothetical protein plu4600 44 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 37524375 Common - hypothetical protein plu0364 45 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 37524507 Common gntU gluconate transporter, low affinity GNT 1 system plu0498 79 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 37528191 Common - hypothetical protein plu4363 12 None None None 37527431 Pathogen - hypothetical protein plu3558 1 None None None 37524888 Common - hypothetical protein plu0896 60 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 37524272 Common - hypothetical protein plu0253 12 COG3177 COG3177, Uncharacterized conserved protein Function unknown 37524713 Common ftsB cell divison protein FtsB plu0712 61 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 37525547 Common lrp leucine-responsive transcriptional regulator plu1600 157 COG1522 Lrp, Transcriptional regulators Transcription 37526913 Common - hypothetical protein plu3025 17 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37527516 Common ddl D-alanine--D-alanine ligase plu3652 223 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 37526741 Common - hypothetical protein plu2851 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 37525186 Common - hypothetical protein plu1218 58 COG0439 AccC, Biotin carboxylase Lipid metabolism 37524801 Common mtr tryptophan permease plu0800 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 37524986 Common phfC hypothetical protein plu0996 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37526789 Common - hypothetical protein plu2899 18 COG2369 COG2369, Uncharacterized protein, homolog of phage Mu protein gp30 Function unknown 37527288 Common - hypothetical protein plu3414 28 COG3772 COG3772, Phage-related lysozyme (muraminidase) General function prediction only 37528480 Common rho transcription termination factor Rho plu4663 205 COG1158 Rho, Transcription termination factor Transcription 37525633 Common ISPlu3W Transposase, IS630 family plu1695 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37527613 Pathogen - hypothetical protein plu3751 4 None None None 37525749 Common dinI DNA damage-inducible protein I plu1815 11 None None None 37527426 Common fldB flavodoxin FldB plu3553 67 COG0716 FldA, Flavodoxins Energy production and conversion 37527960 Common gldA glycerol dehydrogenase plu4115 107 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 37528094 Common - hypothetical protein plu4262 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 37528635 Common wblW WblW protein plu4822 49 COG2605 COG2605, Predicted kinase related to galactokinase and mevalonate kinase General function prediction only 37526361 Pathogen - hypothetical protein plu2468 1 None None None 37527658 Common - hypothetical protein plu3796 31 COG5433 COG5433, Transposase DNA replication, recombination, and repair 37525851 Pathogen - hypothetical protein plu1928 2 None None None 37527453 Common - hypothetical protein plu3584 6 None None None 37527371 Common - hypothetical protein plu3498 13 None None None 37527916 Common mreD rod shape-determining protein MreD plu4069 61 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 37526374 Common - hypothetical protein plu2482 153 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 37527266 Common - hypothetical protein plu3392 156 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 37527113 Pathogen - hypothetical protein plu3230 1 None None None 37526295 Pathogen - hypothetical protein plu2394 1 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 37527942 Common livG leucine/isoleucine/valine transporter ATP-binding subunit plu4095 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 37528487 Common - hypothetical protein plu4670 28 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37525333 Common hisS histidyl-tRNA synthetase plu1377 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 37524995 Common - hypothetical protein plu1005 203 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37524368 Common - hypothetical protein plu0355 61 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37525177 Common - hypothetical protein plu1209 9 None None None 37525200 Common - hypothetical protein plu1233 184 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 37527743 Common thiI thiamine biosynthesis protein ThiI plu3884 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 37525366 Common - hypothetical protein plu1412 224 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 37526474 Common pspC DNA-binding transcriptional activator plu2583 17 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 37527349 Pathogen - hypothetical protein plu3476 7 COG4197 COG4197, Uncharacterized protein conserved in bacteria, prophage-related Function unknown 37527920 Common aroQ 3-dehydroquinate dehydratase plu4073 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 37528474 Common rffH glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) plu4657 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 37524796 Common - hypothetical protein plu0795 12 COG0546 Gph, Predicted phosphatases General function prediction only 37525861 Common fliP flagellar biosynthesis protein FliP plu1938 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 37527102 Common - hypothetical protein plu3219 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37527466 Common gcvT glycine cleavage system aminomethyltransferase T plu3598 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 37524894 Common hemL glutamate-1-semialdehyde aminotransferase plu0902 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 37527557 Common - hypothetical protein plu3693 6 None None None 37524156 Common - hypothetical protein plu0130 3 None None None 37527823 Common rfaE bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase plu3968 179 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 37524969 Common - hypothetical protein plu0979 4 None None None 37527045 Common pdl hypothetical protein plu3159 4 None None None 37526542 Common - hypothetical protein plu2651 9 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37527189 Common - hypothetical protein plu3311 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 37525759 Pathogen - hypothetical protein plu1826 1 None None None 37526539 Common - hypothetical protein plu2648 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 37528145 Common - hypothetical protein plu4314 12 COG3789 COG3789, Uncharacterized protein conserved in bacteria Function unknown 37527208 Common - hypothetical protein plu3331 9 None None None 37524120 Common - hypothetical protein plu0094 12 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 37525006 Common - hypothetical protein plu1018 11 None None None 37526531 Pathogen - hypothetical protein plu2640 2 None None None 37524051 Common - hypothetical protein plu0019 15 None None None 37526194 Pathogen - hypothetical protein plu2281 4 None None None 37524892 Pathogen - hypothetical protein plu0900 8 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 37528457 Common dapF diaminopimelate epimerase plu4640 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 37526606 Common ptrB protease II (oligopeptidase B) plu2716 101 COG1770 PtrB, Protease II Amino acid transport and metabolism 37525797 Common - hypothetical protein plu1873 26 COG0439 AccC, Biotin carboxylase Lipid metabolism 37524904 Common pyrG CTP synthetase plu0912 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 37526380 Common - dsDNA-mimic protein plu2488 18 COG3099 COG3099, Uncharacterized protein conserved in bacteria Function unknown 37526039 Common - multidrug efflux system protein MdtJ plu2123 135 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 37524345 Common - hypothetical protein plu0332 2 None None None 37524750 Common - hypothetical protein plu0749 35 None None None 37528171 Common crtB phytoene synthase plu4343 106 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 37525790 Pathogen - hypothetical protein plu1864 1 None None None 37528690 Common - hypothetical protein plu4882 168 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37525755 Common - hypothetical protein plu1821 7 None None None 37527675 Common - hypothetical protein plu3815 81 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 37526217 Common - hypothetical protein plu2305 14 COG3905 COG3905, Predicted transcriptional regulator Transcription 37524167 Common - hypothetical protein plu0142 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 37526209 Common - hypothetical protein plu2296 42 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 37524777 Common mrfG MrfG protein plu0776 9 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37527156 Common pepB aminopeptidase B plu3276 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 37527185 Common - hypothetical protein plu3307 8 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 37527327 Common - hypothetical protein plu3453 4 COG1396 HipB, Predicted transcriptional regulators Transcription 37525770 Common - hypothetical protein plu1837 7 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 37526342 Common cat3 chloramphenicol acetyltransferase (CATIII) plu2449 21 COG4845 COG4845, Chloramphenicol O-acetyltransferase Defense mechanisms 37528121 Common - predicted glycosyl transferase plu4290 178 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37527255 Common - hypothetical protein plu3381 9 None None None 37527871 Common - hypothetical protein plu4016 102 COG1485 COG1485, Predicted ATPase General function prediction only 37526157 Common - hypothetical protein plu2244 138 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37525266 Common - hypothetical protein plu1299 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 37526515 Common - hypothetical protein plu2624 2 None None None 37524050 Common - hypothetical protein plu0018 8 None None None 37527276 Common - hypothetical protein plu3402 2 None None None 37526387 Common - hypothetical protein plu2495 158 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 37527328 Common - hypothetical protein plu3454 10 COG1395 COG1395, Predicted transcriptional regulator Transcription 37528681 Pathogen - hypothetical protein plu4873 3 None None None 37526093 Common ureD urease accessory protein plu2177 58 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 37525162 Common - hypothetical protein plu1194 76 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 37528450 Pathogen - hypothetical protein plu4633 1 None None None 37524443 Common nusG transcription antitermination protein NusG plu0434 215 COG0250 NusG, Transcription antiterminator Transcription 37527851 Pathogen - hypothetical protein plu3996 4 None None None 37524322 Common - hypothetical protein plu0305 11 None None None 37528298 Common - hypothetical protein plu4477 104 COG0582 XerC, Integrase DNA replication, recombination, and repair 37524362 Pathogen - hypothetical protein plu0349 1 None None None 37524614 Common imp organic solvent tolerance protein plu0612 121 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 37526444 Common - hypothetical protein plu2552 82 COG0778 NfnB, Nitroreductase Energy production and conversion 37524309 Common avtA valine--pyruvate transaminase plu0291 162 COG3977 COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase Amino acid transport and metabolism 37527661 Common atoD acetyl-CoA:acetoacetyl-CoA transferase subunit alpha plu3799 99 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 37525452 Common moaD molybdopterin synthase small subunit plu1501 66 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 37526766 Common - hypothetical protein plu2876 15 COG3299 XkdT, Uncharacterized homolog of phage Mu protein gp47 Function unknown 37525510 Common - hypothetical protein plu1563 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 37527706 Common - hypothetical protein plu3846 4 None None None 37525502 Common mrp putative ATPase plu1555 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 37527295 Common - hypothetical protein plu3421 9 None None None 37526008 Common mviN Virulence factor MviN plu2091 195 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 37524663 Common queF 7-cyano-7-deazaguanine reductase plu0662 85 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 37524421 Common - hypothetical protein plu0412 2 None None None 37525964 Common ISPlu3U Transposase, IS630 family plu2047 30 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524788 Common - hypothetical protein plu0787 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37528346 Common truB tRNA pseudouridine synthase B plu4527 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 37528578 Common hslU ATP-dependent protease ATP-binding subunit plu4763 212 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 37526016 Common - hypothetical protein plu2099 17 None None None 37525432 Common - 6-phosphogluconolactonase plu1480 55 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 37524704 Common cysJ sulfite reductase subunit alpha plu0703 105 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 37524263 Common - hypothetical protein plu0244 61 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 37528669 Common walN WalN protein plu4860 228 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 37527095 Common - hypothetical protein plu3212 28 COG5464 COG5464, Uncharacterized conserved protein Function unknown 37527364 Common - hypothetical protein plu3491 22 COG1598 COG1598, Uncharacterized conserved protein Function unknown 37525224 Common rpsP 30S ribosomal protein S16 plu1257 210 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 37526633 Common ISPlu3R Transposase, IS630 family plu2743 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524284 Pathogen - hypothetical protein plu0265 1 None None None 37528181 Common - hypothetical protein plu4353 6 None None None 37524066 Common - hypothetical protein plu0034 15 None None None 37527362 Pathogen - hypothetical protein plu3489 1 None None None 37528614 Common wblE WblE protein plu4801 6 None None None 37527772 Common - hypothetical protein plu3916 78 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 37525875 Common fliS flagellar protein FliS plu1952 92 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 37524145 Common pitA Low-affinity inorganic phosphate transporter plu0119 144 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 37524733 Common - hypothetical protein plu0732 15 None None None 37528371 Common - hypothetical protein plu4552 26 COG2105 COG2105, Uncharacterized conserved protein Function unknown 37527980 Common groES co-chaperonin GroES plu4135 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 37524424 Common - hypothetical protein plu0415 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37525517 Common hisG ATP phosphoribosyltransferase plu1570 211 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 37525814 Pathogen - hypothetical protein plu1890 3 None None None 37525364 Common - hypothetical protein plu1410 9 COG1475 Spo0J, Predicted transcriptional regulators Transcription 37526230 Common - hypothetical protein plu2322 15 COG4693 PchG, Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 37526323 Common pyrF orotidine 5'-phosphate decarboxylase plu2427 167 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 37526806 Common - hypothetical protein plu2916 32 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 37527504 Common hofC type IV pilin biogenesis protein plu3640 134 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 37524202 Common - hypothetical protein plu0180 26 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 37525574 Common msbA lipid transporter ATP-binding/permease protein plu1630 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37524408 Common - predicted hydrolase plu0399 71 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 37528702 Common fdhE formate dehydrogenase accessory protein FdhE plu4896 39 COG3058 FdhE, Uncharacterized protein involved in formate dehydrogenase formation Posttranslational modification, protein turnover, chaperones 37524557 Common serB phosphoserine phosphatase plu0551 148 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 37527716 Common amtB ammonium transporter plu3856 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 37526069 Pathogen - hypothetical protein plu2153 1 None None None 37524852 Pathogen - hypothetical protein plu0857 1 None None None 37527207 Common - hypothetical protein plu3330 9 None None None 37527644 Pathogen sctG Type III secretion component protein SctG plu3782 5 None None None 37526215 Common - hypothetical protein plu2302 10 None None None 37526865 Pathogen - hypothetical protein plu2975 1 None None None 37526140 Common mlc making large colonies protein plu2226 149 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 37524192 Common uxuA mannonate dehydratase plu0170 58 COG1312 UxuA, D-mannonate dehydratase Carbohydrate transport and metabolism 37528544 Common rpsJ 30S ribosomal protein S10 plu4727 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 37525067 Common - hypothetical protein plu1086 17 None None None 37526952 Common - hypothetical protein plu3064 33 None None None 37526406 Pathogen - hypothetical protein plu2514 1 None None None 37528406 Pathogen - hypothetical protein plu4587 1 None None None 37524603 Pathogen - hypothetical protein plu0601 1 None None None 37527907 Common pmbA peptidase PmbA plu4060 154 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 37524279 Common - hypothetical protein plu0260 208 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37528139 Common - hypothetical protein plu4308 23 COG3541 COG3541, Predicted nucleotidyltransferase General function prediction only 37528440 Common fepB Ferric enterobactin binding periplasmic protein precursor FepB plu4623 52 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 37528063 Common - hypothetical protein plu4227 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 37524522 Pathogen - hypothetical protein plu0513 1 None None None 37527590 Common ISPlu3I Transposase, IS630 family plu3728 31 COG3415 COG3415, Transposase and inactivated derivatives DNA replication, recombination, and repair 37525406 Common tolA cell envelope integrity inner membrane protein TolA plu1454 12 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 37525973 Common - hypothetical protein plu2056 10 None None None 37526332 Common - hypothetical protein plu2437 118 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 37525197 Common - hypothetical protein plu1230 30 COG2516 COG2516, Biotin synthase-related enzyme General function prediction only 37525623 Common - hypothetical protein plu1685 15 None None None 37526304 Common - hypothetical protein plu2404 193 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 37525326 Common - hypothetical protein plu1370 74 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 37525608 Common - hypothetical protein plu1667 20 None None None 37525390 Common - hypothetical protein plu1436 4 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 37524970 Common hpaA regulator of the 4HPA-hydroxylase operon plu0980 92 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 37525462 Common rhlE ATP-dependent RNA helicase RhlE plu1511 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 37528261 Pathogen - hypothetical protein plu4437 1 None None None 37526966 Common nuoM NADH dehydrogenase subunit M plu3078 209 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 37527636 Common sctU Type III secretion component protein SctU plu3774 129 COG4792 EscU, Type III secretory pathway, component EscU Intracellular trafficking and secretion 37524194 Common - hypothetical protein plu0172 114 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 37526425 Pathogen - hypothetical protein plu2533 1 None None None 37524933 Common - hypothetical protein plu0941 45 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 37527898 Common rnk nucleoside diphosphate kinase regulator plu4046 91 COG0782 GreA, Transcription elongation factor Transcription 37526320 Common - hypothetical protein plu2424 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 37526687 Common - hypothetical protein plu2797 2 None None None 37526074 Common - hypothetical protein plu2158 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 37526358 Common trpC bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase plu2465 220 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 37525917 Common - hypothetical protein plu1998 11 None None None 37528654 Common tdh L-threonine 3-dehydrogenase plu4845 214 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 37525387 Common sucD succinyl-CoA synthetase subunit alpha plu1433 216 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 37525757 Pathogen - hypothetical protein plu1823 1 None None None 37524979 Common hpaG2 hypothetical protein plu0989 178 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 37528364 Common - hypothetical protein plu4545 7 None None None 37524214 Common - hypothetical protein plu0193 5 None None None 37524172 Pathogen - hypothetical protein plu0147 1 None None None 37524618 Common thiQ thiamin transporter ATP-binding subunit plu0617 249 COG3840 ThiQ, ABC-type thiamine transport system, ATPase component Coenzyme metabolism 37527359 Common - hypothetical protein plu3486 4 None None None 37528007 Common tccA1 Insecticidal toxin complex protein TccA1 plu4169 5 None None None 37524585 Common - hypothetical protein plu0581 4 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 37526488 Common pdxH pyridoxamine 5'-phosphate oxidase plu2597 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 37525620 Common - hypothetical protein plu1682 26 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 37526778 Pathogen - hypothetical protein plu2888 1 None None None 37528613 Common wzxA WzxA protein plu4800 25 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 37527064 Common tctD Two-component response regulator plu3179 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 37525939 Common - hypothetical protein plu2022 13 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 37525565 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase plu1620 228 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 37525563 Common - hypothetical protein plu1618 46 COG0456 RimI, Acetyltransferases General function prediction only 37526945 Common - hypothetical protein plu3057 45 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 37528204 Common plsB glycerol-3-phosphate acyltransferase plu4376 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 37524270 Common - hypothetical protein plu0251 15 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37526273 Common - hypothetical protein plu2372 29 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37526897 Common - hypothetical protein plu3009 10 None None None 37528131 Common - hypothetical protein plu4300 132 COG1802 GntR, Transcriptional regulators Transcription 37525439 Common bioD dithiobiotin synthetase plu1488 156 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 37527473 Common serA D-3-phosphoglycerate dehydrogenase plu3605 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 37524349 Common pmt2 hypothetical protein plu0336 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 37524465 Common lamB maltoporin plu0456 27 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 37524369 Common ISPlu9J Transposase, IS4 family plu0357 26 None None None 37528055 Pathogen - hypothetical protein plu4219 1 None None None 37524879 Pathogen - hypothetical protein plu0885 2 None None None 37525747 Common - hypothetical protein plu1813 79 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 37526557 Common rplT 50S ribosomal protein L20 plu2666 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 37526550 Common pbgP2 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase plu2659 212 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 37527886 Common - putative ABC transporter ATP-binding protein YrbF plu4034 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 37527342 Common - hypothetical protein plu3469 47 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 37524625 Pathogen - hypothetical protein plu0624 4 None None None 37527825 Common - hypothetical protein plu3970 58 COG3025 COG3025, Uncharacterized conserved protein Function unknown 37527271 Common - hypothetical protein plu3397 2 None None None 37524920 Common - hypothetical protein plu0928 11 COG2336 MazE, Growth regulator Signal transduction mechanisms 37527577 Common - hypothetical protein plu3714 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 37525272 Common gltK Glutamate/aspartate transport system permease protein GltK plu1305 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 37526930 Common - hypothetical protein plu3042 216 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 37527599 Common - hypothetical protein plu3737 3 None None None 37527858 Common - hypothetical protein plu4003 109 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 37527589 Common abgR putative DNA-binding transcriptional regulator plu3727 179 COG0583 LysR, Transcriptional regulator Transcription 37524230 Common - hypothetical protein plu0210 213 COG2183 Tex, Transcriptional accessory protein Transcription 37524209 Common cpmF CpmF protein involved in carbapenem resistance plu0187 46 COG1262 COG1262, Uncharacterized conserved protein Function unknown 37526833 Pathogen - hypothetical protein plu2943 1 None None None 37525676 Common - hypothetical protein plu1739 8 None None None 37527739 Common cyoE protoheme IX farnesyltransferase plu3879 175 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 37524516 Common - hypothetical protein plu0507 12 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37524108 Common - hypothetical protein plu0082 29 COG5572 COG5572, Predicted integral membrane protein Function unknown 37528493 Common - hypothetical protein plu4676 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37524570 Common thrB homoserine kinase plu0564 141 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 37524291 Common spoT bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase plu0272 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 37528033 Common - hypothetical protein plu4195 28 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 37525826 Common - hypothetical protein plu1903 7 None None None 37524629 Pathogen - hypothetical protein plu0628 4 None None None 37526754 Common spr Lipoprotein spr precursor plu2864 136 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 37526391 Common - hypothetical protein plu2499 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 37526161 Common - hypothetical protein plu2248 45 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 37528214 Common - hypothetical protein plu4386 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 37524917 Common - hypothetical protein plu0925 10 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 37525870 Common fliG flagellar motor switch protein G plu1947 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 37526168 Pathogen - hypothetical protein plu2255 2 None None None 37524674 Common tsf elongation factor Ts plu0673 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 37524805 Common - hypothetical protein plu0804 5 None None None 37527689 Common fsr Fosmidomycin resistance protein plu3829 131 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37528044 Pathogen - hypothetical protein plu4206 2 None None None 37524268 Pathogen - hypothetical protein plu0249 1 None None None 37525183 Common - hypothetical protein plu1215 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 37525630 Pathogen - hypothetical protein plu1692 1 None None None 37528663 Common kdtA 3-deoxy-D-manno-octulosonic-acid transferase plu4854 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 37524098 Common actP acetate permease plu0072 180 COG4147 DhlC, Predicted symporter General function prediction only 37528630 Pathogen wzy Wzy protein plu4817 2 None None None 37526449 Common msrB methionine sulfoxide reductase B plu2557 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 37527072 Common - hypothetical protein plu3187 31 COG3101 COG3101, Uncharacterized protein conserved in bacteria Function unknown 37525045 Common - hypothetical protein plu1060 46 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 37524687 Common rnhB ribonuclease HII plu0686 236 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 37524668 Common - flavodoxin plu0667 74 COG0716 FldA, Flavodoxins Energy production and conversion 37526024 Common ntpA dATP pyrophosphohydrolase plu2108 45 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 37524652 Common csdA cysteine sulfinate desulfinase plu0651 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 37526182 Common - hypothetical protein plu2269 34 COG3668 ParE, Plasmid stabilization system protein General function prediction only 37526888 Common cobD cobalamin biosynthesis protein plu2998 146 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 37527005 Common - hypothetical protein plu3117 2 None None None 37524297 Pathogen - hypothetical protein plu0279 1 None None None 37526119 Common hcaF 3-phenylpropionate dioxygenase subunit beta plu2205 24 COG5517 COG5517, Small subunit of phenylpropionate dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37526171 Common - hypothetical protein plu2258 44 COG3191 DmpA, L-aminopeptidase/D-esterase Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism 37527100 Common - hypothetical protein plu3217 102 COG3883 COG3883, Uncharacterized protein conserved in bacteria Function unknown 37528605 Common - hypothetical protein plu4792 168 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37528599 Common - hypothetical protein plu4784 27 COG3609 COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain Transcription 37524831 Common agaR Putative aga operon transcriptional repressor plu0832 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 37526089 Common ureC urease subunit alpha plu2173 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 37528510 Common - hypothetical protein plu4693 120 COG0551 TopA, Zn-finger domain associated with topoisomerase type I DNA replication, recombination, and repair 37526389 Common tdk thymidine kinase plu2497 96 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 37527878 Common - hypothetical protein plu4026 2 None None None 37525082 Common - hypothetical protein plu1106 111 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 37528080 Common osmY Osmotically inducible protein Y precursor plu4248 42 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 37525425 Common modF putative molybdenum transport ATP-binding protein ModF plu1473 249 COG1119 ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA Inorganic ion transport and metabolism 37526727 Common rpmF 50S ribosomal protein L32 plu2837 100 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 37528161 Pathogen - hypothetical protein plu4331 1 None None None 37526566 Common yfeD Chelated iron transport system membrane protein yfeD homolog plu2675 192 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 37527605 Common wzc Tyrosine-protein kinase Wzc plu3743 158 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 37527780 Common - hypothetical protein plu3925 10 COG4332 COG4332, Uncharacterized protein conserved in bacteria Function unknown 37524564 Common - NTPase plu0558 34 COG1986 COG1986, Uncharacterized conserved protein Function unknown 37528447 Common - hypothetical protein plu4630 60 COG4264 RhbC, Siderophore synthetase component Secondary metabolites biosynthesis, transport, and catabolism 37526399 Common - hypothetical protein plu2507 155 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 37526616 Common - hypothetical protein plu2726 28 COG2707 COG2707, Predicted membrane protein Function unknown 37525021 Common - hypothetical protein plu1036 22 None None None 37525278 Common - hypothetical protein plu1311 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 37525305 Common ISPlu11D Transposase, IS982 family plu1345 29 COG5421 COG5421, Transposase DNA replication, recombination, and repair 37527352 Pathogen - hypothetical protein plu3479 1 None None None 37527010 Pathogen - hypothetical protein plu3122 1 None None None 37527446 Common - hypothetical protein plu3577 10 None None None 37526351 Common - hypothetical protein plu2458 39 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 37528559 Common argG argininosuccinate synthase plu4742 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 37524494 Common thiE thiamine-phosphate pyrophosphorylase plu0485 204 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 37524372 Common - hypothetical protein plu0361 11 None None None 37528197 Common - hypothetical protein plu4369 12 None None None 37527122 Pathogen - hypothetical protein plu3239 2 None None None 37527700 Common - hypothetical protein plu3840 176 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 37528268 Common fecR regulator for fec operon FecR plu4445 44 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 37524769 Common mrfI MrfI protein plu0768 207 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37526815 Pathogen - hypothetical protein plu2925 1 None None None 37527026 Pathogen - hypothetical protein plu3139 1 COG1708 COG1708, Predicted nucleotidyltransferases General function prediction only 37527548 Common sprT hypothetical protein plu3684 26 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 37525242 Common emrB multidrug resistance protein B plu1275 185 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37527972 Common frdD fumarate reductase subunit D plu4127 21 COG3080 FrdD, Fumarate reductase subunit D Energy production and conversion 37527248 Common recN recombination and repair protein plu3374 198 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 37527409 Common - hypothetical protein plu3536 16 COG0456 RimI, Acetyltransferases General function prediction only 37524451 Common - hypothetical protein plu0442 21 COG4679 COG4679, Phage-related protein Function unknown 37524304 Common ligB NAD-dependent DNA ligase LigB plu0286 218 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 37526060 Common hslJ heat-inducible protein plu2144 11 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 37527576 Common xerC site-specific tyrosine recombinase XerC plu3713 223 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37525484 Pathogen - hypothetical protein plu1537 1 None None None 37526259 Common - hypothetical protein plu2357 25 COG5642 COG5642, Uncharacterized conserved protein Function unknown 37526656 Common - hypothetical protein plu2766 38 COG0439 AccC, Biotin carboxylase Lipid metabolism 37525832 Pathogen - hypothetical protein plu1909 1 None None None 37526080 Common - 3-oxoacyl-(acyl carrier protein) synthase III plu2164 104 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 37525959 Common - hypothetical protein plu2042 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 37528455 Common xerC site-specific tyrosine recombinase XerC plu4638 227 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 37524829 Pathogen - hypothetical protein plu0830 4 COG5153 CVT17, Putative lipase essential for disintegration of autophagic bodies inside the vacuole Intracellular trafficking and secretion / Lipid metabolism 37526971 Common nuoH NADH dehydrogenase subunit H plu3083 185 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 37526252 Common - hypothetical protein plu2350 210 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 37527220 Common rseB periplasmic negative regulator of sigmaE plu3344 46 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 37526147 Common - hypothetical protein plu2234 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 37526598 Common - hypothetical protein plu2707 21 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 37527568 Common xerC site-specific tyrosine recombinase XerC plu3704 224 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 37527393 Common - hypothetical protein plu3520 7 None None None 37527779 Common - hypothetical protein plu3924 213 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 37524726 Pathogen - hypothetical protein plu0725 1 None None None 37524333 Common - hypothetical protein plu0318 4 None None None 37526937 Common rcsC hybrid sensory kinase in two-component regulatory system with RcsB and YojN plu3049 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 37528247 Common - hypothetical protein plu4419 31 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 37524579 Common galT galactose-1-phosphate uridylyltransferase plu0575 79 COG1085 GalT, Galactose-1-phosphate uridylyltransferase Energy production and conversion 37525893 Pathogen - hypothetical protein plu1971 3 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 37525907 Common - hypothetical protein plu1987 85 COG1737 RpiR, Transcriptional regulators Transcription 37525117 Common - hypothetical protein plu1149 79 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 37525903 Common ulaA ascorbate-specific PTS system enzyme IIC plu1981 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 37525559 Common focA formate transporter plu1614 99 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 37526629 Pathogen - hypothetical protein plu2739 1 None None None 37526713 Common - hypothetical protein plu2823 17 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 37524838 Common gatY tagatose-bisphosphate aldolase plu0839 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 37526382 Common oppD oligopeptide transporter ATP-binding component plu2490 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 37527051 Common - hypothetical protein plu3165 106 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 37528188 Common qor quinone oxidoreductase, NADPH-dependent plu4360 196 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 37526914 Common - hypothetical protein plu3026 8 None None None 37528427 Pathogen - hypothetical protein plu4608 4 None None None 37526062 Common - hypothetical protein plu2146 19 None None None 37528303 Common holC DNA polymerase III subunit chi plu4482 49 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 37528038 Common - hypothetical protein plu4200 16 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 37526878 Common cbiL cobalt-precorrin-2 C(20)-methyltransferase plu2988 130 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 37528566 Pathogen - hypothetical protein plu4749 3 None None None 37525934 Common - hypothetical protein plu2016 10 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 37526456 Common dsbB disulfide bond formation protein B plu2564 53 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 37525343 Common cysP thiosulfate transporter subunit plu1387 90 COG4150 CysP, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 37526401 Common - putative aldolase plu2509 148 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 37526335 Common - hypothetical protein plu2440 5 None None None 37527315 Common - hypothetical protein plu3441 29 COG4383 COG4383, Mu-like prophage protein gp29 Function unknown 37526042 Common - hypothetical protein plu2126 36 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 37524643 Pathogen - hypothetical protein plu0642 1 None None None 37524822 Common - hypothetical protein plu0822 6 None None None 37525232 Common pheA bifunctional chorismate mutase/prephenate dehydratase plu1265 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 37528517 Common zntR zinc-responsive transcriptional regulator plu4700 162 COG0789 SoxR, Predicted transcriptional regulators Transcription 37527153 Common - hypothetical protein plu3273 4 None None None 37527482 Common - hypothetical protein plu3614 2 COG0456 RimI, Acetyltransferases General function prediction only 37526603 Common guaB inositol-5-monophosphate dehydrogenase plu2713 239 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 37526412 Common - hypothetical protein plu2520 10 None None None 37526058 Pathogen - hypothetical protein plu2142 2 None None None 37528478 Common wzzE lipopolysaccharide biosynthesis protein WzzE plu4661 15 COG3765 WzzB, Chain length determinant protein Cell envelope biogenesis, outer membrane 37528538 Common rplV 50S ribosomal protein L22 plu4721 225 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 37525293 Common fur ferric uptake regulator plu1327 195 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 37526082 Common - hypothetical protein plu2166 11 None None None 37528533 Common rplN 50S ribosomal protein L14 plu4716 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 37527795 Common exbD biopolymer transport protein ExbD plu3940 141 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 37525178 Common - hypothetical protein plu1210 23 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 37525350 Common ptsH phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) plu1394 135 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 37524101 Common sodA superoxide dismutase plu0075 207 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 37528274 Common - hypothetical protein plu4451 36 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 37528525 Common rpmD 50S ribosomal protein L30 plu4708 161 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 37524774 Common mrfX MrfX protein plu0773 8 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 37524926 Common - hypothetical protein plu0934 127 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 37524706 Common cysH phosphoadenosine phosphosulfate reductase plu0705 154 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 37525158 Common lysR DNA-binding transcriptional regulator LysR plu1190 178 COG0583 LysR, Transcriptional regulator Transcription