Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete genome NC_005072 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 33861446 Common leuS leucyl-tRNA synthetase PMM0889 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33860867 Nonpathogen - possible Pollen allergen PMM0309 2 None None None 33862173 Nonpathogen - hypothetical protein PMM1617 2 None None None 33862232 Common - hypothetical protein PMM1676 9 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 33860652 Nonpathogen - hypothetical protein PMM0092 2 None None None 33861589 Common - Cobalamin synthesis protein/P47K PMM1033 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 33862029 Common - hypothetical protein PMM1473 10 None None None 33862208 Common - hypothetical protein PMM1652 152 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 33861813 Common - possible dTDP-glucose 4,6-dehydratase PMM1257 214 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 33862214 Common dnaX DNA polymerase, gamma and tau subunits PMM1658 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 33861339 Common - putative oxidoreductase PMM0782 162 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 33862239 Nonpathogen - hypothetical protein PMM1683 2 COG0316 IscA, Uncharacterized conserved protein Function unknown 33862151 Common - hypothetical protein PMM1595 9 None None None 33861481 Common - hypothetical protein PMM0924 10 None None None 33862265 Common mraY Putative phospho-N-acetylmuramoyl-pentapeptide-transferase PMM1709 228 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 33860849 Common - hypothetical protein PMM0291 98 COG0391 COG0391, Uncharacterized conserved protein Function unknown 33861143 Nonpathogen - hypothetical protein PMM0586 2 None None None 33861626 Common crtE Polyprenyl synthetase PMM1070 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 33861129 Common trpA tryptophan synthase subunit alpha PMM0572 218 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 33860954 Common - possible Glycosyl transferase, group 1 PMM0397 159 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861734 Common - Glycosyl transferase group 1 PMM1178 134 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861634 Nonpathogen - hypothetical protein PMM1078 2 None None None 33861821 Common ribD putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase PMM1265 227 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 33862135 Common - hypothetical protein PMM1579 22 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 33861720 Common futA putative iron ABC transporter, substrate binding protein PMM1164 113 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 33862070 Common lipA lipoyl synthase PMM1514 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 33861122 Common dnaA chromosomal replication initiation protein PMM0565 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 33861462 Common - hypothetical protein PMM0905 10 None None None 33861852 Nonpathogen - marine cyanobacterial conserved hypothetical PMM1296 2 None None None 33860840 Common fabI enoyl-(acyl carrier protein) reductase PMM0282 230 COG0623 FabI, Enoyl- acyl-carrier-protein 33860647 Nonpathogen - hypothetical protein PMM0087 2 None None None 33861868 Common - hypothetical protein PMM1312 43 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 33861232 Common - Uracil-DNA glycosylase PMM0675 151 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 33861315 Common sir Ferredoxin-sulfite reductase PMM0758 127 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 33861582 Common - hypothetical protein PMM1026 17 COG4446 COG4446, Uncharacterized protein conserved in bacteria Function unknown 33862043 Common rpsT 30S ribosomal protein S20 PMM1487 113 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 33861859 Common - hypothetical protein PMM1303 77 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 33860614 Nonpathogen - hypothetical protein PMM0054 2 None None None 33861981 Common - Serine protease, trypsin family:HtrA/DegQ protease family PMM1425 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 33861937 Common - hypothetical protein PMM1381 108 COG2135 COG2135, Uncharacterized conserved protein Function unknown 33862094 Common rpmJ 50S ribosomal protein L36 PMM1538 140 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 33861021 Common - protein secretion component, Tat family PMM0464 199 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 33861434 Common metH putative methionine synthase PMM0877 176 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 33860759 Common pyrD dihydroorotate dehydrogenase 2 PMM0199 182 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 33861692 Nonpathogen - possible Uncharacterized protein family UPF005 PMM1136 1 None None None 33860722 Common - hypothetical protein PMM0162 22 None None None 33861286 Common - ATP-dependent DNA ligase PMM0729 105 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 33861696 Common polA DNA polymerase I PMM1140 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 33861701 Common pntB putative nicotinamide nucleotide transhydrogenase, subunit beta PMM1145 122 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 33861206 Common - Pentapeptide repeats PMM0649 61 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 33861793 Common - hypothetical protein PMM1237 6 None None None 33861710 Common ilvH acetolactate synthase 3 regulatory subunit PMM1154 193 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 33860970 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase PMM0413 212 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 33860667 Common aroK shikimate kinase PMM0107 199 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 33862118 Common recA recombinase A PMM1562 214 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 33861719 Nonpathogen - possible Trehalase PMM1163 1 None None None 33860779 Nonpathogen - hypothetical protein PMM0219 2 None None None 33860782 Common psbA Photosystem II PsbA protein (D1) PMM0223 19 None None None 33860991 Common - possible ABC transporter, ATP binding protein PMM0434 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 33860578 Common - hypothetical protein PMM0018 4 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 33861297 Nonpathogen petN cytochrome b6-f complex subunit VIII PMM0740 2 None None None 33862179 Common ssb single-strand DNA-binding protein PMM1623 192 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 33861161 Common - hypothetical protein PMM0604 8 None None None 33861398 Common fmt putative Methionyl-tRNA formyltransferase PMM0841 215 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 33861736 Common sppA signal peptide peptidase SppA (protease IV) PMM1180 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33860918 Common - hypothetical protein PMM0360 56 COG3542 COG3542, Uncharacterized conserved protein Function unknown 33860856 Common psbF cytochrome b559 subunit beta PMM0298 10 None None None 33861567 Nonpathogen - hypothetical protein PMM1011 1 None None None 33862062 Common - ATP-dependent protease La (LON) domain PMM1506 56 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 33861243 Common - hypothetical protein PMM0686 7 COG2127 COG2127, Uncharacterized conserved protein Function unknown 33861911 Nonpathogen - hypothetical protein PMM1355 2 None None None 33862075 Common psaL photosystem I reaction center protein subunit XI PMM1519 10 None None None 33861565 Common - putative nitrogen regulation protein NifR3 family homolog PMM1009 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 33861221 Common - hypothetical protein PMM0664 5 None None None 33860743 Common dgkA Prokaryotic diacylglycerol kinase PMM0183 84 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 33861967 Nonpathogen - hypothetical protein PMM1411 1 None None None 33861838 Nonpathogen - hypothetical protein PMM1282 5 None None None 33861007 Common - putative multidrug efflux ABC transporter PMM0450 91 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 33861041 Common xthA exodeoxyribonuclease III PMM0484 197 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 33861374 Common hli17 possible high light inducible protein PMM0817 5 None None None 33861846 Common - hypothetical protein PMM1290 212 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 33862138 Common hemF coproporphyrinogen III oxidase PMM1582 113 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 33861875 Nonpathogen - possible Beta-lactamase PMM1319 1 None None None 33860766 Nonpathogen secE preprotein translocase subunit SecE PMM0206 2 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 33860660 Common nadB L-aspartate oxidase PMM0100 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 33860787 Common psbO Photosystem II manganese-stabilizing protein PMM0228 9 None None None 33861332 Nonpathogen - hypothetical protein PMM0775 2 None None None 33861773 Common - putative phosphoheptose isomerase PMM1217 119 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 33861555 Nonpathogen - hypothetical protein PMM0999 1 None None None 33862056 Common - L,L-diaminopimelate aminotransferase PMM1500 221 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 33860561 Common dnaN DNA polymerase III subunit beta PMM0001 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 33861459 Common rpmB 50S ribosomal protein L28 PMM0902 102 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 33861048 Common phhB pterin-4-alpha-carbinolamine dehydratase PMM0491 109 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 33861743 Common - hypothetical protein PMM1187 249 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 33861649 Common BioB Biotin synthase PMM1093 177 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 33860967 Common rpsD 30S ribosomal protein S4 PMM0410 216 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 33861611 Common chlI Protoporphyrin IX Magnesium chelatase, ChlI subunit PMM1055 71 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 33861687 Nonpathogen - hypothetical protein PMM1131 2 None None None 33861329 Common - hypothetical protein PMM0772 13 None None None 33861584 Nonpathogen - hypothetical protein PMM1028 2 None None None 33861960 Nonpathogen hli5 possible high light inducible protein PMM1404 1 None None None 33861870 Common clpP ATP-dependent Clp protease proteolytic subunit PMM1314 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33861133 Common - hypothetical protein PMM0576 44 COG3339 COG3339, Uncharacterized conserved protein Function unknown 33861349 Nonpathogen - hypothetical protein PMM0792 2 None None None 33862030 Common - DnaJ-like protein PMM1474 206 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 33860607 Common thiO PUTATIVE THIAMINE BIOSYNTHESIS OXIDOREDUCTASE PMM0047 132 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 33861683 Nonpathogen - possible NAD(P) transhydrogenase beta subunit PMM1127 2 None None None 33861617 Common trxA Thioredoxin PMM1061 234 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 33860605 Common - arginine decarboxylase PMM0045 117 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 33860715 Common - hypothetical protein PMM0155 41 COG2954 COG2954, Uncharacterized protein conserved in bacteria Function unknown 33860803 Nonpathogen - cob(I)alamin adenosyltransferase PMM0245 22 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 33862245 Common pyrG CTP synthetase PMM1689 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 109150042 Nonpathogen petM cytochrome b6f complex subunit PetM PMM1152a 2 None None None 33860596 Common cbiD cobalt-precorrin-6A synthase PMM0036 75 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 33861274 Nonpathogen - hypothetical protein PMM0717 10 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 33861537 Common - hypothetical protein PMM0981 113 COG0730 COG0730, Predicted permeases General function prediction only 33861392 Nonpathogen - hypothetical protein PMM0835 5 None None None 33861254 Nonpathogen - possible D12 class N6 adenine-specific DNA met PMM0697 1 None None None 33862224 Common gcvP glycine dehydrogenase PMM1668 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 33861087 Common rps1b 30S ribosomal protein S1 homolog B, putative Nbp1 PMM0530 212 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 33861403 Nonpathogen - possible Uncharacterized secreted proteins, Ya PMM0846 1 None None None 33861033 Nonpathogen - hypothetical protein PMM0476 7 None None None 33861456 Common - Possible myo-inositol-1(or 4)-monophosphatase PMM0899 209 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 33860731 Common - hypothetical protein PMM0171 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 33860734 Common menE probable O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase) PMM0174 101 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33861267 Common - ABC transporter, substrate binding protein, phosphate PMM0710 142 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 33860791 Nonpathogen - hypothetical protein PMM0232 2 None None None 33860754 Common rbgA ribosomal biogenesis GTPase PMM0194 97 COG1161 COG1161, Predicted GTPases General function prediction only 33861437 Common - hypothetical protein PMM0880 49 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 33861028 Nonpathogen hli20 possible high light inducible protein PMM0471 2 None None None 33861131 Common - YciI-like protein PMM0574 9 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 33861116 Common - Putative hydroxyacylglutathione hydrolase PMM0559 184 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 33861900 Common rplU 50S ribosomal protein L21 PMM1344 37 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 33860594 Nonpathogen - hypothetical protein PMM0034 2 None None None 33861179 Common - hypothetical protein PMM0622 5 None None None 33860692 Common - photosystem I assembly protein Ycf3 PMM0132 19 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 33861992 Common groEL chaperonin GroEL PMM1436 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 33862268 Common uvrA excinuclease ABC subunit A PMM1712 240 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 33861449 Common argC N-acetyl-gamma-glutamyl-phosphate reductase PMM0892 214 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 33860881 Common - hypothetical protein PMM0323 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 33861168 Common glmU UDP-N-acetylglucosamine pyrophosphorylase PMM0611 232 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 33862143 Nonpathogen - hypothetical protein PMM1587 5 None None None 33861917 Common - Short-chain dehydrogenase/reductase (SDR) superfamily PMM1361 226 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33862059 Common - hypothetical protein PMM1503 8 None None None 33861599 Nonpathogen - possible Borrelia lipoprotein PMM1043 1 None None None 33861014 Common ppx putative exopolyphosphatase PMM0457 184 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 33862270 Common - possible protein kinase:ABC1 family PMM1714 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 33861886 Common - hypothetical protein PMM1330 10 None None None 33861928 Common - hypothetical protein PMM1372 15 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 33862177 Common mreC putative rod shape-determining protein PMM1621 131 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 33861092 Common - short chain dehydrogenase PMM0535 235 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 33861156 Nonpathogen - hypothetical protein PMM0599 2 None None None 33860870 Common rps1a 30S ribosomal protein S1 PMM0312 220 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 33861362 Nonpathogen - hypothetical protein PMM0805 1 None None None 33861591 Nonpathogen - possible DNA gyrase/topoisomerase IV, subunit PMM1035 1 None None None 33861303 Common - Possible Zn-dependent peptidase PMM0746 193 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 33861750 Nonpathogen - hypothetical protein PMM1194 1 None None None 33860895 Nonpathogen - hypothetical protein PMM0337 2 None None None 33860905 Nonpathogen - hypothetical protein PMM0347 2 None None None 33861336 Common - hypothetical protein PMM0779 99 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 33862041 Common rpoB DNA-directed RNA polymerase subunit beta PMM1485 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 33861326 Common glgC glucose-1-phosphate adenylyltransferase PMM0769 174 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 33862125 Common moeB molybdopterin biosynthesis protein PMM1569 224 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 33861005 Common ctaB putative protoheme IX farnesyltransferase PMM0448 165 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 33862008 Common atpH,atpD ATP synthase, delta (OSCP) subunit PMM1452 160 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 33860888 Common - possible LysM domain PMM0330 53 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 33861091 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha PMM0534 175 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 33861897 Common nblS two-component sensor histidine kinase PMM1341 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 33860717 Common ndhE NADH dehydrogenase subunit K PMM0157 140 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 33860678 Common - hypothetical protein PMM0118 11 COG4370 COG4370, Uncharacterized protein conserved in bacteria Function unknown 33862010 Common atpG F0F1 ATP synthase subunit B' PMM1454 49 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 33861854 Common lpdA dihydrolipoamide dehydrogenase PMM1298 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 33860839 Common hisB imidazoleglycerol-phosphate dehydratase PMM0281 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 33860627 Common - HIT (Histidine triad) family protein PMM0067 203 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 33861664 Common - Phospholipid and glycerol acyltransferase (from 'motifs_6.msf') PMM1108 20 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 33861088 Common - Creatininase PMM0531 79 COG1402 COG1402, Uncharacterized protein, putative amidase General function prediction only 33861781 Common - hypothetical protein PMM1225 39 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 33861509 Common - hypothetical protein PMM0953 10 None None None 33861353 Common hisA PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE RIBOTIDE ISOMERASE PMM0796 215 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 33861656 Nonpathogen - hypothetical protein PMM1100 1 None None None 33862191 Common miaA,trpX tRNA delta-2-isopentenylpyrophosphate (IPP) transferase PMM1635 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 33860944 Common aroD 3-dehydroquinate dehydratase PMM0387 169 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 33862187 Nonpathogen - hypothetical protein PMM1631 1 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 33860638 Common - possible 4'-phosphopantetheinyl transferase family protein PMM0078 3 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 33861512 Common - Bacitracin resistance protein BacA PMM0956 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 33860566 Common - hypothetical protein PMM0006 45 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 33860972 Common - putative L-cysteine/cystine lyase PMM0415 197 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 33861922 Common - DUF209 PMM1366 136 COG1741 COG1741, Pirin-related protein General function prediction only 33860681 Common - hypothetical protein PMM0121 10 None None None 33860612 Common - Aldo/keto reductase family PMM0052 163 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 33861142 Common - hypothetical protein PMM0585 60 COG2936 COG2936, Predicted acyl esterases General function prediction only 33862048 Common nusA transcription elongation factor NusA PMM1492 224 COG0195 NusA, Transcription elongation factor Transcription 33861416 Nonpathogen - hypothetical protein PMM0859 1 None None None 33861079 Common pyrH uridylate kinase PMM0522 245 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 33861577 Nonpathogen - possible Gram-negative pili assembly chaperone PMM1021 1 None None None 33860746 Common hisC Aminotransferase class-I PMM0186 239 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 33860979 Common - tRNA/rRNA methyltransferase (SpoU) PMM0422 189 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 33861178 Common dnaQ possible DNA polymerase III, epsilon subunit PMM0621 35 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 33861780 Common gumB putative polysaccharide export protein PMM1224 112 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 33860633 Common - cysteine desulfurase activator complex subunit SufB PMM0073 185 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 33861999 Common - Domain of unknown function DUF21 PMM1443 211 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 33861058 Nonpathogen - hypothetical protein PMM0501 2 None None None 33861234 Common - carboxyl-terminal processing protease PMM0677 185 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 33862233 Nonpathogen - hypothetical protein PMM1677 2 None None None 33861240 Common purK phosphoribosylaminoimidazole carboxylase PMM0683 193 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 33861976 Nonpathogen - possible Fumarate reductase subunit D PMM1420 2 None None None 33861628 Common cbiA,cobB putative Cobyrinic acid a,c-diamide synthase PMM1072 136 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 33861540 Nonpathogen - possible Josephin PMM0984 1 None None None 33860981 Common - hypothetical protein PMM0424 24 None None None 33860879 Common minD putative septum site-determining protein MinD PMM0321 238 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 33861890 Common lpxB lipid-A-disaccharide synthase PMM1334 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 33861427 Common rpmG 50S ribosomal protein L33 PMM0870 46 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 33860675 Common crtQ zeta-carotene desaturase PMM0115 42 COG3349 COG3349, Uncharacterized conserved protein Function unknown 33861494 Common umuC putative UmuC protein PMM0937 165 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 33862201 Common mutS,fdv DNA mismatch repair protein PMM1645 199 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 33861063 Common purA,adeK adenylosuccinate synthetase PMM0506 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 33861380 Common - Domain of unknown function DUF143:Iojap-related protein PMM0823 193 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 33862022 Common fumC fumarate hydratase PMM1466 230 COG0114 FumC, Fumarase Energy production and conversion 33861639 Common - possible kinase PMM1083 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 33861779 Common - putative glycosyl transferase, group 1 PMM1223 82 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861632 Nonpathogen - hypothetical protein PMM1076 9 None None None 33861342 Common prk phosphoribulokinase PMM0785 64 COG3954 PrkB, Phosphoribulokinase Energy production and conversion 33861288 Nonpathogen - possible COMC family PMM0731 1 None None None 33861877 Common - Bacterial histone-like DNA-binding protein PMM1321 210 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 33861613 Common cytM cytochrome cM PMM1057 10 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 33861545 Nonpathogen - ATP/GTP-binding site motif A (P-loop) PMM0989 1 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 33861281 Common pstA,phoT putative phosphate ABC transporter PMM0724 225 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 33861532 Common - putative multidrug efflux ABC transporter PMM0976 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 33861762 Nonpathogen - hypothetical protein PMM1206 1 None None None 33862096 Common secY preprotein translocase subunit SecY PMM1540 239 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 33861769 Common - Glycosyl transferase group 1 PMM1213 25 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861165 Common menB naphthoate synthase PMM0608 179 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 33861436 Common CobN cobalamin biosynthetic protein CobN PMM0879 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 33861306 Common - ABC-transporter, membrane spanning component PMM0749 33 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 33861313 Common recG ATP-dependent DNA helicase recG PMM0756 230 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 33861698 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase PMM1142 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 33861150 Common - Peptidase family M3 PMM0593 125 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 33862163 Common psaC photosystem I subunit VII PMM1607 49 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 33860998 Common - Aldo/keto reductase family PMM0441 33 COG1453 COG1453, Predicted oxidoreductases of the aldo/keto reductase family General function prediction only 33861694 Common - translation-associated GTPase PMM1138 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 33861473 Common - hypothetical protein PMM0916 17 COG1160 COG1160, Predicted GTPases General function prediction only 33861703 Common pntA-1 putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1) PMM1147 165 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 33861347 Common - hypothetical protein PMM0790 10 None None None 33861228 Common - putative phosphonate ABC transporter PMM0671 88 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 33861752 Common manC GDP-mannose pyrophosphorylase PMM1196 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 33860801 Common thyX FAD-dependent thymidylate synthase PMM0243 64 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 33861205 Common - Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site PMM0648 66 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 33862032 Common - Aldo/keto reductase family PMM1476 31 COG1453 COG1453, Predicted oxidoreductases of the aldo/keto reductase family General function prediction only 33862230 Common dnaB DnaB replicative helicase PMM1674 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 33861190 Common crtL2 putative lycopene epsilon cyclase PMM0633 9 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 33861774 Common rfaE putative ADP-heptose synthase PMM1218 127 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 33862073 Common - hypothetical protein PMM1517 10 None None None 33861337 Common purQ phosphoribosylformylglycinamidine synthase PMM0780 231 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 33861805 Nonpathogen - hypothetical protein PMM1249 1 None None None 33862237 Common - hypothetical protein PMM1681 29 COG0398 COG0398, Uncharacterized conserved protein Function unknown 33861492 Common - hypothetical protein PMM0935 165 COG1576 COG1576, Uncharacterized conserved protein Function unknown 33862133 Common trpE Anthranilate synthase component I and chorismate binding enzyme PMM1577 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 33862101 Common rpsH 30S ribosomal protein S8 PMM1545 247 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 33860858 Common psbJ photosystem II reaction center protein PsbJ PMM0300 10 None None None 33862218 Common rplT 50S ribosomal protein L20 PMM1662 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 33860655 Common - similar to serum resistance locus BrkB PMM0095 26 COG1295 Rbn, Predicted membrane protein Function unknown 33860929 Common - putative cyanate ABC transporter PMM0371 198 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 33861988 Common - putative DnaK-type molecular chaperone (HSP70 family) PMM1432 19 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 33862175 Common - two-component response regulator PMM1619 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 33860956 Common - Putative deoxyribose-phosphate aldolase PMM0399 32 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 33861644 Common clpC ClpC PMM1088 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 33860986 Nonpathogen - hypothetical protein PMM0429 2 None None None 33861064 Common psb27 possible Photosystem II reaction center Psb27 protein PMM0507 9 None None None 33861862 Common ddlA D-alanine--D-alanine ligase PMM1306 211 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 33861909 Common prmA putative methyltransferase for Ribosomal protein L11 PMM1353 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 33861966 Nonpathogen - possible PTS system, Lactose/Cellobiose specif PMM1410 1 None None None 33860603 Common - flavoprotein PMM0043 112 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 33860885 Nonpathogen - putative neutral invertase-like protein PMM0327 6 None None None 33860965 Common - possible Cystathionine gamma-synthase PMM0408 203 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 33861745 Common - hypothetical protein PMM1189 205 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 33861457 Common hisZ ATP phosphoribosyltransferase regulatory subunit PMM0900 92 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 33861395 Nonpathogen - possible Nucleoside diphosphate kinase PMM0838 1 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 33861464 Common Dxs 1-deoxy-D-xylulose-5-phosphate synthase PMM0907 226 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 33861352 Common - hypothetical protein PMM0795 9 None None None 33861123 Common - hypothetical protein PMM0566 9 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 33862085 Common prfA peptide chain release factor 1 PMM1529 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 33861557 Common - hypothetical protein PMM1001 10 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 33861889 Common - Peptide methionine sulfoxide reductase PMM1333 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 33861023 Common - possible secreted protein MPB70 precursor PMM0466 62 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 33861560 Common purT phosphoribosylglycinamide formyltransferase 2 PMM1004 212 COG0027 PurT, Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) Nucleotide transport and metabolism 33861256 Nonpathogen - hypothetical protein PMM0699 2 None None None 109150044 Nonpathogen - hypothetical protein PMM0220 2 None None None 33861298 Common - Thf1-like protein PMM0741 10 None None None 33861272 Nonpathogen - possible chorismate binding enzyme PMM0715 1 None None None 33861586 Common - Ferric uptake regulator family PMM1030 88 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 33861955 Nonpathogen hli6 possible high light inducible protein PMM1399 1 None None None 33861791 Common - possible N-terminal fragment of transketolase PMM1235 221 COG3959 COG3959, Transketolase, N-terminal subunit Carbohydrate transport and metabolism 33862243 Common gcvT putative Glycine cleavage T-protein (aminomethyl transferase) PMM1687 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 33860680 Common - putative cell division inhibitor PMM0120 105 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 33860637 Common yrvN recombination factor protein RarA PMM0077 246 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 33861569 Nonpathogen - hypothetical protein PMM1013 2 None None None 33861330 Nonpathogen - possible Geminivirus coat protein PMM0773 2 None None None 33861514 Nonpathogen - hypothetical protein PMM0958 2 None None None 33861245 Nonpathogen - possible Elongation factor Tu domain 2 PMM0688 1 None None None 33860916 Common thiD Phosphomethylpyrimidine kinase PMM0358 216 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 33861408 Common - Putative CbbY homolog PMM0851 99 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 33860745 Common - hypothetical protein PMM0185 26 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 33860768 Common eno Enolase PMM0208 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 33860669 Common - possible POLO box duplicated region. PMM0109 3 None None None 33861717 Common - hypothetical protein PMM1161 10 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 33861104 Common - hypothetical protein PMM0547 18 None None None 33861891 Common lpxA UDP-N-acetylglucosamine acyltransferase PMM1335 169 COG1043 LpxA, Acyl- acyl carrier protein 33861731 Nonpathogen - possible AEC transporter family, substrate unknown PMM1175 2 COG0679 COG0679, Predicted permeases General function prediction only 33861848 Common - possible apolipoprotein n-acyltransferase PMM1292 56 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 33862060 Common pheA Chorismate mutase-Prephenate dehydratase PMM1504 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 109150041 Nonpathogen petL cytochrome b6f complex subunit PetL PMM102a 1 None None None 33860580 Common - hypothetical protein PMM0020 52 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 33861948 Nonpathogen - possible Heat-labile enterotoxin alpha chain PMM1392 1 None None None 33861291 Nonpathogen - possible Helix-turn-helix protein, copG family PMM0734 1 None None None 33860808 Common pth peptidyl-tRNA hydrolase PMM0250 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 33860621 Nonpathogen - YGGT family, conserved hypothetical integral membrane protein PMM0061 9 COG0762 COG0762, Predicted integral membrane protein Function unknown 33861043 Common - hypothetical protein PMM0486 10 None None None 33861823 Nonpathogen - hypothetical protein PMM1267 2 None None None 33861836 Common - putative bifuntional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PMM1280 216 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 33861371 Nonpathogen - possible Cytochrome oxidase c subunit VIb PMM0814 1 None None None 33861113 Nonpathogen - hypothetical protein PMM0556 5 None None None 33862254 Common - hypothetical protein PMM1698 20 COG0170 SEC59, Dolichol kinase Lipid metabolism 33861938 Common - fatty acid desaturase, type 2 PMM1382 23 COG3239 DesA, Fatty acid desaturase Lipid metabolism 33860907 Common - hypothetical protein PMM0349 109 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 33861073 Common - Possible membrane associated protease PMM0516 33 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 33860583 Common gap2 Glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) PMM0023 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 33861201 Common - putative sulfate transporter PMM0644 160 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 33861906 Common - Pentapeptide repeats PMM1350 35 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 33860687 Nonpathogen - possible Signal peptide binding domain PMM0127 1 None None None 33861334 Common - hypothetical protein PMM0777 64 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 33861301 Common - hypothetical protein PMM0744 8 None None None 33860893 Nonpathogen - possible NADH-PLASTOQUINONE OXIDOREDUCTASE CHAIN 5 PMM0335 1 None None None 33862115 Common - hypothetical protein PMM1559 10 None None None 33860690 Common - Thymidylate kinase PMM0130 229 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 33860852 Common ndhC NADH dehydrogenase subunit A PMM0294 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 33860721 Common gltA methylcitrate synthase PMM0161 193 COG0372 GltA, Citrate synthase Energy production and conversion 33860713 Common - hypothetical protein PMM0153 65 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 33861439 Common uvrC excinuclease ABC subunit C PMM0882 224 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 33861535 Nonpathogen - hypothetical protein PMM0979 1 None None None 33860640 Common - hypothetical protein PMM0080 20 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 33861593 Nonpathogen - hypothetical protein PMM1037 2 None None None 33860811 Nonpathogen - photosystem II reaction center I protein PsbI PMM0253 1 None None None 33862098 Common rpsE 30S ribosomal protein S5 PMM1542 239 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 33862079 Common psaB photosystem I P700 chlorophyll a apoprotein A2 PMM1523 14 None None None 33860728 Common chlM Mg-protoporphyrin IX methyl transferase PMM0168 29 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 33861147 Common proA gamma-glutamyl phosphate reductase PMM0590 190 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 33861833 Nonpathogen - hypothetical protein PMM1277 1 None None None 33862226 Common - hypothetical protein PMM1670 29 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 33861378 Common - hypothetical protein PMM0821 46 COG4448 AnsA, L-asparaginase II Amino acid transport and metabolism 33861943 Nonpathogen - hypothetical protein PMM1387 2 None None None 33861002 Common ctaD Cytochrome c oxidase, subunit I PMM0445 175 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 33861931 Nonpathogen - possible M protein repeat PMM1375 1 None None None 33861012 Common - hypothetical protein PMM0455 76 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 33861180 Common hisS histidyl-tRNA synthetase PMM0623 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861722 Nonpathogen - hypothetical protein PMM1166 2 None None None 33862221 Common sqdB sulfolipid (UDP-sulfoquinovose) biosynthesis protein PMM1665 146 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861651 Nonpathogen F2J10.13 hypothetical protein PMM1095 2 None None None 33861405 Nonpathogen - hypothetical protein PMM0848 2 COG2119 COG2119, Predicted membrane protein Function unknown 33862211 Common tig trigger factor PMM1655 211 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 33861125 Common - putative CaCA family sodium/calcium exchanger PMM0568 119 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 33860883 Common petB cytochrome b6 PMM0325 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 33861642 Common todF 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase PMM1086 116 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 33861454 Common dnaK Molecular chaperone DnaK, heat shock protein hsp70 PMM0897 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 33860736 Common menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase PMM0176 25 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 33861213 Nonpathogen - possible 7TM chemoreceptor PMM0656 1 None None None 33862251 Common - multidrug efflux transporter, MFS family PMM1695 63 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 33861915 Common - hypothetical protein PMM1359 32 COG2259 COG2259, Predicted membrane protein Function unknown 33861118 Common - putative multidrug efflux ABC transporter PMM0561 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 33862193 Common - possible transcriptional regulator PMM1637 51 COG1725 COG1725, Predicted transcriptional regulators Transcription 33861957 Nonpathogen - hypothetical protein PMM1401 2 None None None 33862261 Common aroE Shikimate / quinate 5-dehydrogenase PMM1705 224 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 33860927 Nonpathogen - possible Ribosomal protein S14p/S29e PMM0369 2 None None None 33862006 Common atpC F0F1 ATP synthase subunit gamma PMM1450 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 33861994 Common atpB F0F1 ATP synthase subunit beta PMM1438 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 33861477 Common glnA Glutamine synthetase, glutamate--ammonia ligase PMM0920 229 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 33861046 Common futB,hitB putative iron ABC transporter PMM0489 150 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 33862272 Common thrC threonine synthase PMM1716 222 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 33860610 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PMM0050 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 33862057 Common - S1 RNA binding domain:Ribonuclease E and G PMM1501 187 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 33862127 Common - hypothetical protein PMM1571 64 COG1606 COG1606, ATP-utilizing enzymes of the PP-loop superfamily General function prediction only 33860822 Common lytB 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PMM0264 184 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 33861607 Common thrA,hom Homoserine dehydrogenase:ACT domain PMM1051 213 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 33861974 Nonpathogen - possible Voltage gated chloride channel PMM1418 1 None None None 33861364 Common - possible ABC transporter component, ATP-binding domain PMM0807 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 33860748 Common nadC Nicotinate-nucleotide pyrophosphorylase:Quinolinate phosphoriobsyl transferase PMM0188 203 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 33861570 Common - hypothetical protein PMM1014 21 COG1787 COG1787, Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes Defense mechanisms 33862038 Common hli3 possible high light inducible protein PMM1482 8 None None None 33862018 Nonpathogen - hypothetical protein PMM1462 2 None None None 33861051 Common ppa putative inorganic pyrophosphatase PMM0494 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 33860977 Common lepA GTP-binding protein LepA PMM0420 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 33860772 Nonpathogen - hypothetical protein PMM0212 5 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 33860631 Common - ABC transporter, membrane component PMM0071 169 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 33862051 Nonpathogen - hypothetical protein PMM1495 5 None None None 33860877 Common - hypothetical protein PMM0319 197 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 33860983 Common - Sun protein (Fmu protein) PMM0426 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 33861269 Common - multidrug efflux transporter, MFS family PMM0712 30 None None None 33860846 Common chlD Protoporphyrin IX Magnesium chelatase, ChlD subunit PMM0288 74 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 33860935 Nonpathogen - hypothetical protein PMM0377 1 None None None 33860673 Common hemD putative uroporphyrinogen III synthase PMM0113 89 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 33862024 Common bioF putative 8-amino-7-oxononanoate synthase PMM1468 191 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 33861542 Nonpathogen - hypothetical protein PMM0986 4 COG3613 COG3613, Nucleoside 2-deoxyribosyltransferase Nucleotide transport and metabolism 33860875 Nonpathogen psbM possible Photosystem II reaction center M protein (PsbM) PMM0317 1 None None None 33860930 Common - putative cyanate ABC transporter PMM0372 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 33861689 Common - hypothetical protein PMM1133 6 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 33861523 Common ureE urease accessory protein UreE PMM0967 64 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 33861323 Common rpe Ribulose-phosphate 3-epimerase PMM0766 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 33860625 Common - ABC transporter, ATP binding protein PMM0065 249 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 33860699 Nonpathogen - hypothetical protein PMM0139 4 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 33861601 Nonpathogen - hypothetical protein PMM1045 2 None None None 33861920 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase PMM1364 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 33860771 Common trxB FAD-dependent pyridine nucleotide-disulphide oxidoreductase PMM0211 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 33861787 Common - hypothetical protein PMM1231 6 None None None 33861355 Common pgsA CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PMM0798 207 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 33862012 Common atpI F0F1 ATP synthase subunit A PMM1456 186 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 33861500 Common rpsO 30S ribosomal protein S15 PMM0943 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 33862185 Common - Type II alternative RNA polymerase sigma factor, sigma-70 family PMM1629 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 33861365 Common - Rieske iron-sulfur protein 2Fe-2S subunit PMM0808 68 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 33861424 Common metG methionyl-tRNA synthetase PMM0867 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861658 Common recD possible exodeoxyribonuclease V 67 kD polypeptide PMM1102 114 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 33860815 Common - Molybdenum cofactor biosynthesis protein PMM0257 177 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 33861218 Common nrdJ ribonucleotide reductase (Class II) PMM0661 14 None None None 33861107 Common rbcL ribulose bisophosphate carboxylase PMM0550 67 COG1850 RbcL, Ribulose 1,5-bisphosphate carboxylase, large subunit Carbohydrate transport and metabolism 33861418 Nonpathogen - possible Virion host shutoff protein PMM0861 1 None None None 33861344 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase PMM0787 155 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 33860780 Common - Glutathione S-transferase C terminus PMM0221 78 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 33860837 Common - hypothetical protein PMM0279 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 33861475 Common - putative cytidine/deoxycytidylate deaminase PMM0918 205 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 33861579 Nonpathogen - possible lactate/malate dehydrogenase, alpha/b PMM1023 1 None None None 33860649 Common - ABC transporter, ATP binding component PMM0089 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 33861524 Common ureF urease accessory protein UreF PMM0968 52 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 33860816 Common glyA serine hydroxymethyltransferase PMM0258 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 33861888 Common - leucyl aminopeptidase PMM1332 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 33860719 Common ndhI NADH dehydrogenase subunit I PMM0159 190 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 33860762 Common rplJ 50S ribosomal protein L10 PMM0202 207 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 33860707 Common rbcR putative Rubisco transcriptional regulator PMM0147 193 COG0583 LysR, Transcriptional regulator Transcription 33861993 Common groES co-chaperonin GroES PMM1437 215 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 33862146 Common panC putative bifunctional enzyme; pantothenate synthetase/cytidylate kinase PMM1590 213 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 33861961 Nonpathogen - hypothetical protein PMM1405 1 None None None 33861484 Common - hypothetical protein PMM0927 76 COG0628 PerM, Predicted permease General function prediction only 33861798 Nonpathogen - hypothetical protein PMM1242 1 None None None 33862154 Common - hypothetical protein PMM1598 51 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 33860886 Common FPG Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase) PMM0328 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 33860590 Nonpathogen - possible Transcription factor TFIID (or TATA-b PMM0030 1 None None None 33860806 Common - hypothetical protein PMM0248 10 None None None 33860850 Common ndhJ NADH dehydrogenase subunit J PMM0292 168 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 33861236 Common - putative transcripton factor PMM0679 8 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 33860589 Common - hypothetical protein PMM0029 82 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861467 Common - hypothetical protein PMM0910 18 COG0762 COG0762, Predicted integral membrane protein Function unknown 33862161 Common rimM 16S rRNA-processing protein PMM1605 139 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 33862069 Common - hypothetical protein PMM1513 7 None None None 33861834 Common - putative circadian phase modifier CpmA homolog PMM1278 66 COG1691 COG1691, NCAIR mutase (PurE)-related proteins General function prediction only 33862066 Common rps7 30S ribosomal protein S7 PMM1510 247 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 33860711 Common - hypothetical protein PMM0151 10 COG1354 COG1354, Uncharacterized conserved protein Function unknown 33860828 Common CobS Cobalamin-5-phosphate synthase CobS PMM0270 93 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 33861135 Common - Phosphoribosyl-AMP cyclohydrolase PMM0578 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 33861193 Common - Isochorismatase hydrolase family PMM0636 68 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 33861212 Nonpathogen - hypothetical protein PMM0655 1 None None None 33861986 Common - hypothetical protein PMM1430 9 None None None 33862052 Common - Dolichyl-phosphate-mannose-protein mannosyltransferase PMM1496 40 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 33860963 Common queA Queuosine biosynthesis protein PMM0406 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 33862241 Common speE spermidine synthase PMM1685 120 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 33861279 Nonpathogen - hypothetical protein PMM0722 2 None None None 33861871 Common ilvC ketol-acid reductoisomerase PMM1315 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 33861285 Common - DEAD/DEAH box helicase:Helicase C-terminal domain PMM0728 133 COG1201 Lhr, Lhr-like helicases General function prediction only 33861671 Common crtH putative carotenoid isomerase PMM1115 109 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 33861293 Nonpathogen - possible Alpha-2-macroglobulin family N-termin PMM0736 1 None None None 33861530 Common urtE Putative ATP-binding subunit of urea ABC transport system PMM0974 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 33861270 Common gap1 Putative glyceraldehyde 3-phosphate dehydrogenase PMM0713 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 33861907 Nonpathogen - hypothetical protein PMM1351 4 None None None 33860629 Common - Esterase/lipase/thioesterase family active site PMM0069 102 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 33861394 Nonpathogen - hypothetical protein PMM0837 2 None None None 33861559 Nonpathogen - possible Photosystem II reaction centre N prot PMM1003 1 None None None 33861163 Common lepB leader peptidase I PMM0606 179 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 33861258 Nonpathogen - possible LysM domain PMM0701 1 None None None 33861815 Common - pyridoxal-phosphate-dependent aminotransferase PMM1259 198 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 33860844 Common - NUDIX hydrolase PMM0286 175 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 33862248 Common - possible p-aminobenzoate synthetase PMM1692 221 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 33861409 Nonpathogen - hypothetical protein PMM0852 2 None None None 33861964 Nonpathogen - hypothetical protein PMM1408 2 None None None 33861345 Common proB gamma-glutamyl kinase PMM0788 189 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 33861054 Common priA primosomal protein N' (replication factor Y) PMM0497 212 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 33861550 Common - GCN5-related N-acetyltransferase PMM0994 6 None None None 33860663 Common - hypothetical protein PMM0103 11 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 33862269 Common recN DNA REPAIR PROTEIN RECN, ABC transporter PMM1713 211 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 33862258 Common purU formyltetrahydrofolate deformylase PMM1702 221 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 33861472 Common - putative lipoprotein signal peptidase PMM0915 45 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 33862170 Common - hypothetical protein PMM1614 68 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 33861706 Common - putative thioredoxin reductase PMM1150 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 33861149 Common - lipase family protein PMM0592 18 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 33862113 Common rplD 50S ribosomal protein L4 PMM1557 218 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 33861442 Common dacB putative D-Ala-D-Ala carboxypeptidase 3 (S13) family PMM0885 74 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 33860671 Common - hypothetical protein PMM0111 7 None None None 33862205 Common uvrB excinuclease ABC subunit B PMM1649 224 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 33860619 Common - hypothetical protein PMM0059 10 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 33861704 Nonpathogen - possible EF-1 guanine nucleotide exchange doma PMM1148 2 None None None 33862103 Common rplX 50S ribosomal protein L24 PMM1547 210 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 33861669 Common - two-component response regulator PMM1113 207 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 33860751 Common spoT guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase PMM0191 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 33861082 Common hemH ferrochelatase PMM0525 176 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 33861801 Nonpathogen - hypothetical protein PMM1245 2 None None None 33860958 Common lipB putative lipoate-protein ligase B PMM0401 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 33861645 Common - putative ribosomal-protein-alanine acetyltransferase PMM1089 67 COG0456 RimI, Acetyltransferases General function prediction only 33862160 Common - hypothetical protein PMM1604 9 None None None 161347555 Nonpathogen psbN photosystem II reaction center protein N PMM0252 1 None None None 33860700 Common ycf34 putative Ycf34 PMM0140 10 None None None 33861309 Common - Glycosyl transferase, family 2 PMM0752 156 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 33862120 Common - hypothetical protein PMM1564 10 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 33861096 Common - Biotin/lipoate A/B protein ligase family PMM0539 38 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 33861764 Common gmd GDPmannose 4,6-dehydratase PMM1208 226 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 33861932 Common rbpD RNA-binding protein RbpD PMM1376 65 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 33862090 Common rplQ 50S ribosomal protein L17 PMM1534 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 33860860 Common selD Selenide,water dikinase PMM0302 113 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 33861302 Common - Insulinase family (Peptidase family M16) PMM0745 102 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 33861562 Common - Glutathione peroxidase PMM1006 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 33861675 Common som possible porin PMM1119 21 None None None 33861319 Common typA tyrosine binding protein PMM0762 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 33861952 Nonpathogen hli9 possible high light inducible protein PMM1396 1 None None None 33862003 Common - hypothetical protein PMM1447 11 None None None 33861714 Common psbC Photosystem II PsbC protein (CP43) PMM1158 10 None None None 33861546 Nonpathogen - hypothetical protein PMM0990 2 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 33862169 Common - Zinc metallopeptidase M20/M25/M40 family PMM1613 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 33860575 Common - Domain of unknown function DUF25 PMM0015 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 33861186 Nonpathogen - hypothetical protein PMM0629 2 None None None 33861602 Common - possible multidrug efflux transporter, MFS family PMM1046 8 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 33861893 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PMM1337 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 33861946 Nonpathogen hli10 possible high light inducible protein PMM1390 1 None None None 33861857 Common argD acetylornithine aminotransferase PMM1301 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 33862134 Common psaD Photosystem I protein PsaD PMM1578 10 None None None 33860980 Common - hypothetical protein PMM0423 20 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 33861036 Common - hypothetical protein PMM0479 32 COG0857 Pta, BioD-like N-terminal domain of phosphotransacetylase General function prediction only 33860813 Common leuD 3-isopropylmalate dehydratase small subunit PMM0255 210 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 33861785 Common - Dehydrogenase, E1 component PMM1229 163 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 33860835 Common - hypothetical protein PMM0277 17 COG2251 COG2251, Predicted nuclease (RecB family) General function prediction only 33861004 Common - hypothetical protein PMM0447 54 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 33861105 Common - HAM1 family protein PMM0548 219 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 33861653 Common recR RecR protein PMM1097 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 33861198 Nonpathogen - hypothetical protein PMM0641 2 None None None 33861784 Nonpathogen - hypothetical protein PMM1228 1 None None None 33862083 Common alr alanine racemase PMM1527 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 33861188 Nonpathogen - possible NADH-Ubiquinone/plastoquinone (comple PMM0631 2 None None None 33861726 Common - hypothetical protein PMM1170 10 None None None 33861447 Common pgi glucose-6-phosphate isomerase PMM0890 209 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 33861238 Common - hypothetical protein PMM0681 83 COG1565 COG1565, Uncharacterized conserved protein Function unknown 33860643 Common - putative sodium/sulfate transporter, DASS family PMM0083 118 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 33861388 Common chlH magnesium chelatase PMM0831 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 33861174 Common murI Putative aspartate and glutamate racemase:Glutamate racemase PMM0617 189 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 33862001 Common nadD nicotinic acid mononucleotide adenyltransferase PMM1445 36 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 33862176 Nonpathogen - hypothetical protein PMM1620 2 None None None 33861519 Common ureC urease subunit alpha PMM0963 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 33861502 Common dnaE DNA polymerase III subunit alpha PMM0945 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 33861526 Common urtA putative urea ABC transporter, substrate binding protein PMM0970 110 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 33861411 Common ftsH4 cell division protein FtsH4 PMM0854 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 33861977 Nonpathogen - possible Gibberellin regulated protein PMM1421 2 None None None 33861311 Common tsf elongation factor Ts PMM0754 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 33860932 Common - mttA/Hcf106 family PMM0374 3 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 33860937 Nonpathogen - hypothetical protein PMM0379 1 None None None 33861357 Nonpathogen - hypothetical protein PMM0800 2 None None None 33860948 Common engA GTP-binding protein EngA PMM0391 217 COG1160 COG1160, Predicted GTPases General function prediction only 33860914 Common - 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase PMM0356 100 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 33861571 Common - hypothetical protein PMM1015 11 COG3686 COG3686, Predicted membrane protein Function unknown 33861624 Common - hypothetical protein PMM1068 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 33862034 Common - hypothetical protein PMM1478 10 None None None 33861280 Common pstC,phoW putative phosphate ABC transporter PMM0723 225 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 33860921 Common - possible MarR family PMM0363 2 COG1846 MarR, Transcriptional regulators Transcription 33860634 Nonpathogen - hypothetical protein PMM0074 2 None None None 33861660 Nonpathogen - hypothetical protein PMM1104 7 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 33861066 Nonpathogen - possible Helix-turn-helix domain of resolvase PMM0509 2 None None None 33861384 Common - ABC transporter, possibly multidrug efflux PMM0827 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 33860697 Common fabD Malonyl coenzyme A-acyl carrier protein transacylase PMM0137 208 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 33860987 Common hisF Imidazole glycerol phosphate synthase subunit HisF (cyclase) PMM0430 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 33861776 Common - putative glycosyl transferase PMM1220 100 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 33861080 Common cobO possible cob(I)alamin adenosyltransferase PMM0523 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 33861544 Nonpathogen - Helix-hairpin-helix DNA-binding motif class 1 PMM0988 1 COG1948 MUS81, ERCC4-type nuclease DNA replication, recombination, and repair 33861850 Nonpathogen - putative nickel-containing superoxide dismutase precursor (NISOD) PMM1294 13 None None None 33861636 Common kprS ribose-phosphate pyrophosphokinase PMM1080 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 33861757 Common - Putative CDP-tyvelose-2-epimerase (RfbE) PMM1201 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 33861119 Common - possible acetyltransferase PMM0562 29 COG0456 RimI, Acetyltransferases General function prediction only 33861847 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PMM1291 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 33860620 Common accC acetyl-CoA carboxylase biotin carboxylase subunit PMM0060 236 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 33862253 Common - Type II alternative RNA polymerase sigma factor, sigma-70 family PMM1697 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 33861389 Common dapB dihydrodipicolinate reductase PMM0832 214 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 33861941 Nonpathogen hli11 possible high light inducible protein PMM1385 1 None None None 33861321 Common - possible ABC transporter, ATP binding component PMM0764 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 33862077 Nonpathogen - possible Annexin PMM1521 1 None None None 33861452 Common - hypothetical protein PMM0895 10 None None None 33861203 Common - hypothetical protein PMM0646 83 COG2138 COG2138, Uncharacterized conserved protein Function unknown 33860656 Common - inositol monophosphate family protein PMM0096 204 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 33860588 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PMM0028 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 33860696 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III PMM0136 210 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 33861010 Common fabG 3-oxoacyl-[acyl-carrier protein] reductase PMM0453 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33861730 Nonpathogen - hypothetical protein PMM1174 2 None None None 33861972 Nonpathogen - hypothetical protein PMM1416 2 None None None 33861422 Common - hypothetical protein PMM0865 9 None None None 33862180 Common - DedA family; putative alkaline phosphatase-like protein PMM1624 146 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 33862263 Common argG Argininosuccinate synthase PMM1707 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 33860737 Common menF Isochorismate synthase PMM0177 220 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33861264 Nonpathogen - possible Lipoprotein PMM0707 1 None None None 33861724 Common F4P13.20 hypothetical protein PMM1168 21 None None None 33860973 Common - hypothetical protein PMM0416 67 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33861009 Common groEL chaperonin GroEL PMM0452 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 33860597 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein PMM0037 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 33862148 Nonpathogen pebB phycoerythrobilin:ferredoxin oxidoreductase PMM1592 4 None None None 33860572 Common argH argininosuccinate lyase PMM0012 232 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 33860900 Nonpathogen - possible Helper component proteinase PMM0342 1 None None None 33861808 Common - possible acetyltransferase PMM1252 60 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 33861225 Common - Conserved hypothetical protein 46 PMM0668 138 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 33861595 Common - hypothetical protein PMM1039 82 COG2307 COG2307, Uncharacterized protein conserved in bacteria Function unknown 33860795 Nonpathogen - hypothetical protein PMM0237 1 None None None 33860884 Common petD PetD protein (subunit IV of the Cytochrome b6f complex) PMM0326 45 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 33860799 Common - Phosphotransferase superclass PMM0241 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 33861145 Common - hypothetical protein PMM0588 7 None None None 33861018 Common petA cytochrome b6f complex subunit PetA PMM0461 10 None None None 33860827 Common - two-component sensor histidine kinase PMM0269 143 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 33860726 Common cysC Adenylylsulfate kinase PMM0166 144 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 33861618 Common guaB inositol-5-monophosphate dehydrogenase PMM1062 233 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 33862121 Common - arogenate dehydrogenase PMM1565 159 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 33861629 Common - Putative glucose 6-phosphate dehydrogenase effector OpcA PMM1073 17 COG3429 COG3429, Glucose-6-P dehydrogenase subunit Carbohydrate transport and metabolism 33861905 Common - hypothetical protein PMM1349 109 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 33860909 Nonpathogen - possible Small, acid-soluble spore proteins, a PMM0351 2 None None None 33862196 Common - putative acetyltransferase, GNAT family PMM1640 32 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 33861881 Nonpathogen - hypothetical protein PMM1325 3 None None None 33862045 Common rpiA Ribose 5-phosphate isomerase PMM1489 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 33860686 Nonpathogen - possible Herpesvirus UL6 like PMM0126 1 None None None 33860899 Nonpathogen - hypothetical protein PMM0341 2 None None None 33861095 Common - hypothetical protein PMM0538 33 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 33861640 Common cad Orn/Lys/Arg decarboxylase family 1 PMM1084 57 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 33861538 Common - HNH endonuclease:HNH nuclease PMM0982 29 COG1403 McrA, Restriction endonuclease Defense mechanisms 33862020 Common - FtsJ cell division protein:S4 domain:Hemolysin A PMM1464 130 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 33861820 Common ftsH3 cell division protein FtsH3 PMM1264 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 33860961 Nonpathogen - hypothetical protein PMM0404 1 None None None 33862081 Common - bifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASE PMM1525 137 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 33861866 Common panB putative Ketopantoate hydroxymethyltransferase PMM1310 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 33861741 Common - hypothetical protein PMM1185 10 None None None 33861060 Common - possible precorrin-6X reductase PMM0503 23 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 33860593 Nonpathogen - hypothetical protein PMM0033 2 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 33862216 Common - possible amidase enhancer PMM1660 45 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 33861685 Nonpathogen - possible Notch (DSL) domain PMM1129 1 None None None 33861006 Common - putative multidrug efflux ABC transporter PMM0449 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 33862106 Common rpl29 50S ribosomal protein L29 PMM1550 5 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 33862088 Common rplM 50S ribosomal protein L13 PMM1532 228 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 33861277 Nonpathogen - possible Poly A polymerase regulatory subunit PMM0720 1 None None None 33861827 Common surE Survival protein SurE PMM1271 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 33860567 Common - hypothetical protein PMM0007 134 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 33861027 Common - probable o-sialoglycoprotein endopeptidase PMM0470 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 33861056 Common argB acetylglutamate kinase PMM0499 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 33861770 Common - possible phosphatase PMM1214 91 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 33860609 Common coaE putative dephospho-CoA kinase PMM0049 204 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 33860764 Common rplK 50S ribosomal protein L11 PMM0204 248 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 33861587 Common - ABC transporter, ATP binding domain, possibly Mn transport PMM1031 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 33861708 Common ycf39 putative chaperon-like protein for quinone binding in photosystem II PMM1152 92 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861995 Common atpC F0F1 ATP synthase subunit epsilon PMM1439 167 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 33861810 Common - putative glycosyl transferase, family 2 PMM1254 83 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33861181 Nonpathogen - possible Hantavirus glycoprotein G2 PMM0624 1 None None None 33860788 Common dfp putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylase PMM0229 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 33862027 Common BioD putative Dethiobiotin synthase PMM1471 154 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 33860804 Common ntcA Global nitrogen regulatory protein, CRP family of transcriptional regulators PMM0246 130 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 33860741 Nonpathogen - hypothetical protein PMM0181 1 None None None 33861796 Common - methyltransferase PMM1240 51 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33861479 Common - hypothetical protein PMM0922 8 None None None 33861504 Common - hypothetical protein PMM0947 8 None None None 33861130 Common - hypothetical protein PMM0573 10 None None None 33861294 Nonpathogen - hypothetical membrane protein PMM0737 1 None None None 33861141 Common glgB glycogen branching enzyme PMM0584 150 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 33861950 Nonpathogen - hypothetical protein PMM1394 1 None None None 33862047 Common - DUF150 PMM1491 32 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 33861069 Common - putative arsenate reductase PMM0512 69 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 33861486 Common secD preprotein translocase subunit SecD PMM0929 221 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 33862067 Common rpsL 30S ribosomal protein S12 PMM1511 243 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 33861040 Common hemL glutamate-1-semialdehyde aminotransferase PMM0483 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 33861614 Common petG cytochrome b6f complex subunit PetG PMM1058 7 None None None 33861153 Common - Putative glucokinase PMM0596 91 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 33861817 Common ugd UDP-glucose 6-dehydrogenase PMM1261 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 33861912 Common - hypothetical protein PMM1356 28 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 33860774 Common - putative sulfate transporter PMM0214 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 33861469 Common pykF pyruvate kinase PMM0912 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 33860831 Common - probable oxidoreductase PMM0273 182 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 33862064 Common tuf elongation factor Tu PMM1508 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 33861564 Nonpathogen - hypothetical protein PMM1008 1 None None None 33861832 Nonpathogen - hypothetical protein PMM1276 2 None None None 33861191 Common por possible light-dependent protochlorophyllide oxido-reductase PMM0634 56 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33861843 Common - hypothetical protein PMM1287 10 None None None 33860838 Common - Retinal pigment epithelial membrane protein PMM0280 36 COG3670 COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 33862040 Common rpoC1 DNA-directed RNA polymerase subunit gamma PMM1484 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 33861216 Common - NAD-dependent DNA ligase N-terminus PMM0659 155 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 33860725 Nonpathogen - Translation initiation factor SUI1 PMM0165 2 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 33861137 Common clpB1 ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB PMM0580 221 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 33861317 Common chlP Aromatic-ring hydroxylase (flavoprotein monooxygenase) PMM0760 104 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 33861712 Common - photosystem I assembly protein Ycf4 PMM1156 10 None None None 33860862 Common uvrD UvrD/REP helicase PMM0304 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 33862092 Common rps11 30S ribosomal protein S11 PMM1536 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 33861622 Common leuA 2-isopropylmalate synthase PMM1066 213 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 33861959 Common - HNH endonuclease:HNH nuclease PMM1403 22 None None None 33861098 Nonpathogen - hypothetical protein PMM0541 2 None None None 33861460 Common - Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein PMM0903 228 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 33861631 Common petH ferredoxin-NADP oxidoreductase (FNR) PMM1075 115 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 33862036 Common - hypothetical protein PMM1480 13 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 33861101 Common chlB light-independent protochlorophyllide reductase subunit B PMM0544 41 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 33861327 Common gnd 6-phosphogluconate dehydrogenase PMM0770 172 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 33861520 Common ureB urease subunit beta PMM0964 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 33860703 Common crtB,pys Squalene and phytoene synthase PMM0143 111 COG1562 ERG9, Phytoene/squalene synthetase Lipid metabolism 33861647 Common - hypothetical protein PMM1091 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 33861759 Common rfbG CDP-glucose 4,6-dehydratase PMM1203 195 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861580 Nonpathogen - hypothetical protein PMM1024 1 None None None 33861488 Nonpathogen - hypothetical protein PMM0931 2 None None None 33861020 Common - hypothetical protein PMM0463 10 None None None 33860709 Common ndhF NAD(P)H-quinone oxidoreductase subunit F PMM0149 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 33861989 Common - pyrimidine regulatory protein PyrR PMM1433 112 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 161347553 Common ndhD NAD(P)H-quinone oxidoreductase subunit D PMM0594 205 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 33861853 Common trpC indole-3-glycerol-phosphate synthase PMM1297 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 33862054 Common - hypothetical protein PMM1498 83 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 33862267 Common sps Sucrose phosphate synthase PMM1711 124 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861673 Nonpathogen pbsY photosystem II protein Y PMM1117 1 None None None 33862236 Nonpathogen - hypothetical protein PMM1680 2 None None None 33860994 Nonpathogen - hypothetical protein PMM0437 1 None None None 33860865 Nonpathogen - hypothetical protein PMM0307 1 None None None 33861470 Common - possible ABC transporter PMM0913 179 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 33861732 Nonpathogen - possible Helix-turn-helix protein, copG family PMM1176 1 None None None 33861677 Common som possible porin PMM1121 16 None None None 33862167 Common thiC thiamine biosynthesis protein ThiC PMM1611 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 33861223 Common - possible ABC transporter, ATP-binding component PMM0666 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 33862172 Common smpB SsrA-binding protein PMM1616 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 33860925 Nonpathogen - hypothetical protein PMM0367 3 COG1359 COG1359, Uncharacterized conserved protein Function unknown 33861929 Common - hypothetical protein PMM1373 10 COG3152 COG3152, Predicted membrane protein Function unknown 33862203 Common - DNA polymerase III subunit delta PMM1647 29 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 33861902 Common - hypothetical protein PMM1346 6 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 33861681 Nonpathogen - possible Bacterial regulatory proteins, deoR f PMM1125 1 None None None 33860617 Common - putative chromosome segregation protein, SMC ATPase superfamily PMM0057 200 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33860902 Nonpathogen - possible Influenza non-structural protein (NS2 PMM0344 1 None None None 33861746 Common rpsN 30S ribosomal protein S14 PMM1190 202 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 33860854 Common - hypothetical protein PMM0296 28 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 33860753 Common rluD putative pseudouridylate synthase specific to ribosomal large subunit PMM0193 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 33861984 Common - hypothetical protein PMM1428 94 COG2947 COG2947, Uncharacterized conserved protein Function unknown 33862013 Common atp1 possible ATP synthase subunit 1 PMM1457 9 None None None 33861210 Common gloA LACTOYLGLUTATHIONE LYASE PMM0653 130 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 33861667 Common - Glutaredoxin-related protein PMM1111 127 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 33862209 Common dapA Dihydrodipicolinate synthetase PMM1653 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 33860573 Common - RNA-binding region RNP-1 (RNA recognition motif) PMM0013 62 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 33861368 Nonpathogen - hypothetical protein PMM0811 1 None None None 33861425 Common - probable ribonuclease II PMM0868 156 COG0557 VacB, Exoribonuclease R Transcription 33860570 Common ftsY signal recognition particle docking protein FtsY PMM0010 246 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 33860939 Nonpathogen - hypothetical protein PMM0381 1 None None None 33861128 Nonpathogen - hypothetical protein PMM0571 2 None None None 33860996 Common - hypothetical protein PMM0439 40 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 33861869 Common clpP4 ATP-dependent Clp protease-like protein PMM1313 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33861262 Common phoB two-component response regulator, phosphate PMM0705 213 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 33861214 Nonpathogen - possible Vanadium/alternative nitrogenase delt PMM0657 1 None None None 33860949 Common - possible cobalt transport protein PMM0392 29 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 33861970 Nonpathogen - hypothetical protein PMM1414 2 None None None 33860776 Nonpathogen - Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMM0216 4 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 33860564 Common purF amidophosphoribosyltransferase PMM0004 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 33862189 Nonpathogen - hypothetical protein PMM1633 2 None None None 33862109 Common rplV 50S ribosomal protein L22 PMM1553 220 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 33862202 Common cobH putative Precorrin-8X methylmutase CobH PMM1646 117 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 33860761 Common rplL 50S ribosomal protein L7/L12 PMM0201 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 33862071 Common - Site-specific recombinase PMM1515 83 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 33860890 Nonpathogen - possible Rhomboid family PMM0332 1 None None None 33861662 Common - hypothetical protein PMM1106 10 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 33861359 Common - putative endonuclease PMM0802 237 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 33861638 Nonpathogen - possible Helix-turn-helix PMM1082 1 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 33860959 Common fadD putative long-chain-fatty-acid--CoA ligase PMM0402 215 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 33861778 Common - possible glycosyl transferase PMM1222 66 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33861496 Common dnaG DNA primase PMM0939 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 33861975 Nonpathogen - possible ATP synthase B/B' CF(0) PMM1419 1 None None None 33860934 Nonpathogen - hypothetical protein PMM0376 1 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 33860723 Common - hypothetical protein PMM0163 25 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 33861498 Nonpathogen - possible cAMP phosphodiesterase class-II PMM0941 2 None None None 33861590 Common - G-protein beta WD-40 repeats PMM1034 48 COG2319 COG2319, FOG: WD40 repeat General function prediction only 33861927 Common - hypothetical protein PMM1371 8 None None None 33862220 Common thiG thiazole synthase PMM1664 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 33861604 Common - putative ABC transporter, oligopeptides PMM1048 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 33861510 Common - ABC transporter, multidrug efflux family PMM0954 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 33861529 Common urtD putative ATP binding subunit of urea ABC transport system PMM0973 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 33860569 Common nusB transcription antitermination protein NusB PMM0009 69 COG0781 NusB, Transcription termination factor Transcription 33861944 Common - hypothetical protein PMM1388 12 None None None 33862015 Common ccdA putative c-type cytochrome biogenesis protein CcdA PMM1459 129 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 33860872 Nonpathogen psbT photosystem II reaction center protein T PMM0314 4 None None None 33861121 Common - hypothetical protein PMM0564 24 COG3222 COG3222, Uncharacterized protein conserved in bacteria Function unknown 33861655 Common - ABC transporter, multidrug efflux family PMM1099 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 33861350 Common - hypothetical protein PMM0793 10 COG4071 COG4071, Uncharacterized protein conserved in archaea Function unknown 33861038 Common - nucleotide-binding protein PMM0481 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 33860833 Common pyrE Orotate phosphoribosyltransferase PMM0275 76 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 33860665 Common ribG RibD/ribG C-terminal domain PMM0105 60 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 33861241 Nonpathogen - possible Zinc finger, C2H2 type PMM0684 1 None None None 33861340 Nonpathogen - hypothetical protein PMM0783 2 None None None 33860819 Common - hypothetical protein PMM0261 164 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 33861196 Nonpathogen stpA putative glucosylglycerolphosphate phosphatase PMM0639 4 None None None 33860645 Common - putative potassium channel, VIC family PMM0085 116 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 33861420 Common cobU/cobP putative cobinamide kinase PMM0863 90 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 33860592 Nonpathogen - possible Bacterial type II secretion system pr PMM0032 2 None None None 33861728 Common - hypothetical protein PMM1172 7 None None None 33861721 Common glyQ glycyl-tRNA synthetase subunit alpha PMM1165 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 33861803 Nonpathogen - hypothetical protein PMM1247 1 None None None 33860919 Nonpathogen - possible Phosphoenolpyruvate carboxykinase PMM0361 1 None None None 33861573 Nonpathogen - hypothetical protein PMM1017 4 None None None 33861575 Nonpathogen - possible Integrin alpha cytoplasmic region PMM1019 1 None None None 33861077 Common - NAD binding site PMM0520 25 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 33862131 Common ppc phosphoenolpyruvate carboxylase PMM1575 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 33860579 Common - hypothetical protein PMM0019 163 COG1162 COG1162, Predicted GTPases General function prediction only 33861997 Nonpathogen - hypothetical protein PMM1441 1 None None None 33860797 Common - hypothetical protein PMM0239 9 None None None 33861873 Nonpathogen hli13 possible high light inducible protein PMM1317 1 None None None 33860756 Common - hypothetical protein PMM0196 8 None None None 33861812 Common - putative glycosyl transferase, family 2 PMM1256 109 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33861231 Common aspC Aminotransferase class-I PMM0674 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 33860786 Common cysD ATP-sulfurylase PMM0227 61 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 33861308 Nonpathogen - hypothetical protein PMM0751 2 None None None 33860599 Nonpathogen - hypothetical protein PMM0039 2 None None None 33862227 Nonpathogen - hypothetical protein PMM1671 2 None None None 33860739 Common - Glutaredoxin PMM0179 112 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 33860923 Nonpathogen - possible DsrE-like protein PMM0365 1 COG2044 COG2044, Predicted peroxiredoxins General function prediction only 33861016 Common cobM PUTATIVE PRECORRIN-4 C11-METHYLTRANSFERASE PMM0459 203 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 33861597 Nonpathogen - hypothetical protein PMM1041 3 None None None 33862198 Common - possible transcription regulator PMM1642 13 None None None 33861825 Common ppnK inorganic polyphosphate/ATP-NAD kinase PMM1269 240 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 33860857 Nonpathogen psbL photosystem II reaction center L PMM0299 1 None None None 33860825 Common - probable esterase PMM0267 49 COG0400 COG0400, Predicted esterase General function prediction only 33861552 Nonpathogen - hypothetical protein PMM0996 2 None None None 33861819 Common - ornithine carbamoyltransferase PMM1263 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 33861382 Common carB carbamoyl-phosphate synthase, large subunit PMM0825 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 33861402 Common - hypothetical protein PMM0845 7 None None None 33861765 Common galE UDP-glucose-4-epimerase PMM1209 230 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 33861839 Common - hypothetical protein PMM1283 8 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 33861031 Nonpathogen - hypothetical protein PMM0474 2 None None None 33860897 Common T8L23.23 Bacterial-type phytoene dehydrogenase PMM0339 79 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 33861841 Common rpsP 30S ribosomal protein S16 PMM1285 170 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 33860912 Common - possible Glycosyl transferase PMM0354 2 None None None 33861883 Common - hypothetical protein PMM1327 170 COG0344 COG0344, Predicted membrane protein Function unknown 33862123 Common - hypothetical protein PMM1567 67 COG3001 COG3001, Uncharacterized protein conserved in bacteria Function unknown 33860586 Common efp elongation factor P PMM0026 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 33861910 Common serA putative D-3-phosphoglycerate dehydrogenase (PGDH) PMM1354 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 33861855 Common spoU tRNA/rRNA methyltransferase (SpoU) PMM1299 205 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 33861070 Common lepB Signal peptidase I PMM0513 188 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 33861444 Common nifS possible cysteine desulfurase (class-V aminotransferase family) PMM0887 237 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 33861450 Common ribA/ribB bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein PMM0893 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 33860694 Common rpaB two-component response regulator PMM0134 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 33861169 Common - hypothetical protein PMM0612 47 COG4121 COG4121, Uncharacterized conserved protein Function unknown 33861919 Nonpathogen - hypothetical protein PMM1363 2 None None None 33860659 Common - hypothetical protein PMM0099 10 None None None 33861085 Common - DUF152 PMM0528 114 COG1496 COG1496, Uncharacterized conserved protein Function unknown 33861627 Common - hypothetical protein PMM1071 28 COG1963 COG1963, Uncharacterized protein conserved in bacteria Function unknown 33862255 Common aroF phospho-2-dehydro-3-heoxyheptonate aldolase PMM1699 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 33861209 Nonpathogen - possible 5'-3' exonuclease, C-terminal SAM fol PMM0652 1 None None None 33861172 Common - Possible nitrilase PMM0615 205 COG0388 COG0388, Predicted amidohydrolase General function prediction only 33860732 Common ndhH NAD(P)H-quinone oxidoreductase subunit H PMM0172 192 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 33860942 Common spnII-interrupted-C possible uncharacterized restriction enzyme, interrupted-C PMM0384 15 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 33861184 Common pcb light-harvesting complex protein PMM0627 10 None None None 33861251 Common - Short-chain dehydrogenase/reductase (SDR) superfamily PMM0694 173 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 33860650 Common - possible serine protease PMM0090 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 33861935 Common - putative dape gene and orf2 PMM1379 105 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 33861549 Common - hypothetical protein PMM0993 18 COG3340 PepE, Peptidase E Amino acid transport and metabolism 33861990 Common pgmI phosphoglyceromutase PMM1434 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 33860683 Common cysK2 O-acetylserine (thiol)-lyase A PMM0123 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 33860793 Common - possible Methylpurine-DNA glycosylase (MPG) PMM0234 78 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 33861039 Common phb Band 7 protein PMM0482 57 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 33862158 Nonpathogen - hypothetical protein PMM1602 2 None None None 33862112 Common rplW 50S ribosomal protein L23 PMM1556 213 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 33861025 Common psaJ photosystem I reaction center subunit IX PMM0468 9 None None None 33860926 Nonpathogen - hypothetical protein PMM0368 2 None None None 33862000 Common - hypothetical protein PMM1444 33 COG0486 ThdF, Predicted GTPase General function prediction only 33862142 Common - hypothetical protein PMM1586 11 COG4370 COG4370, Uncharacterized protein conserved in bacteria Function unknown 33861167 Common murF Cytoplasmic peptidoglycan synthetase PMM0610 210 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 33862234 Nonpathogen - hypothetical protein PMM1678 2 None None None 33862049 Nonpathogen - hypothetical protein PMM1493 2 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 33861592 Nonpathogen - hypothetical protein PMM1036 1 None None None 33860676 Common - hypothetical protein PMM0116 162 COG0316 IscA, Uncharacterized conserved protein Function unknown 33861835 Common - hypothetical protein PMM1279 5 None None None 33861325 Common hemA glutamyl-tRNA reductase PMM0768 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 33861155 Common trpS tryptophanyl-tRNA synthetase PMM0598 229 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861189 Common - Short-chain dehydrogenase/reductase (SDR) superfamily PMM0632 229 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33860624 Nonpathogen hli2 possible high light inducible protein PMM0064 4 None None None 33862058 Common - Ribonuclease HII and HIII PMM1502 225 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 33860915 Common - TENA/THI-4 protein PMM0357 73 COG0819 TenA, Putative transcription activator Transcription 33862178 Common mreB Rod shape determining protein PMM1622 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 33862223 Nonpathogen - hypothetical protein PMM1667 1 None None None 33860906 Nonpathogen - possible Spectrin repeat PMM0348 1 None None None 33862086 Common rpmE 50S ribosomal protein L31 PMM1530 150 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 33861049 Common - hypothetical protein PMM0492 112 COG0432 COG0432, Uncharacterized conserved protein Function unknown 33861354 Common - possible mRNA binding protein PMM0797 115 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861455 Common petF ferredoxin, petF-like protein PMM0898 54 COG0633 Fdx, Ferredoxin Energy production and conversion 33860755 Common pgk phosphoglycerate kinase PMM0195 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 33860878 Common minE possible septum site-determining protein MinE PMM0320 82 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 33861428 Common pheT Phenylalanyl-tRNA synthetase beta chain PMM0871 232 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 33861406 Common - hypothetical protein PMM0849 8 COG2119 COG2119, Predicted membrane protein Function unknown 33862194 Common cysE Serine acetyltransferase PMM1638 209 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 33862199 Common ribH riboflavin synthase subunit beta PMM1643 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 33860891 Common rimI GCN5-related N-acetyltransferase PMM0333 25 COG3153 COG3153, Predicted acetyltransferase General function prediction only 33860691 Common - putative P-type ATPase transporter for copper PMM0131 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 33861760 Common ddhA glucose-1-phosphate cytidylyltransferase PMM1204 165 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 33862042 Common - possible deoxyribonuclease, TatD family PMM1486 235 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 33861879 Common - putative GPH family sugar transporter PMM1323 78 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 109150045 Common rsbV anti-anti-sigma regulatory factor RsbV PMM0950 22 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 33860785 Common ftsH2 cell division protein FtsH2 PMM0226 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 33862108 Common rpsC 30S ribosomal protein S3 PMM1552 247 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 33861132 Nonpathogen - hypothetical protein PMM0575 2 None None None 33862023 Common - putative DNA helicase PMM1467 112 COG4581 COG4581, Superfamily II RNA helicase DNA replication, recombination, and repair 33860767 Common clpB2 putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB PMM0207 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 33861543 Common rpsU 30S ribosomal protein S21 PMM0987 18 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 33861090 Common - hypothetical protein PMM0533 33 COG5322 COG5322, Predicted dehydrogenase General function prediction only 33862007 Common atpA F0F1 ATP synthase subunit alpha PMM1451 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 33861718 Nonpathogen - hypothetical protein PMM1162 4 None None None 33861606 Nonpathogen - hypothetical protein PMM1050 2 None None None 33861767 Common - possible polysaccharide export or synthesis protein PMM1211 23 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 33862165 Common fabF 3-oxoacyl-[acyl-carrier-protein] synthase II PMM1609 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33861942 Common - possible permease PMM1386 55 COG0795 COG0795, Predicted permeases General function prediction only 33862116 Common - hypothetical protein PMM1560 13 COG1142 HycB, Fe-S-cluster-containing hydrogenase components 2 Energy production and conversion 33861461 Common - hypothetical protein PMM0904 13 None None None 33861751 Common - hypothetical protein PMM1195 8 None None None 33861008 Common - possible Arenavirus glycoprotein PMM0451 2 None None None 33861335 Common cobW putative cobalamin synthesis protein PMM0778 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 33860735 Common menC putative O-succinylbenzoate synthase PMM0175 20 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 33860880 Common minC possible septum site-determining protein PMM0322 58 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 33861438 Common - hypothetical protein PMM0881 88 COG1981 COG1981, Predicted membrane protein Function unknown 33861939 Common - hypothetical protein PMM1383 49 None None None 33861578 Nonpathogen - hypothetical protein PMM1022 1 None None None 33860639 Common bcp putative bacterioferritin comigratory (BCP) protein PMM0079 216 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 33860823 Common - hypothetical protein PMM0265 15 COG2259 COG2259, Predicted membrane protein Function unknown 33862186 Common - MgtE family, putative magnesium transport protein PMM1630 191 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 33861979 Common - hypothetical protein PMM1423 17 None None None 33861032 Common rplS 50S ribosomal protein L19 PMM0475 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 33860951 Common - hypothetical protein PMM0394 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 33861369 Nonpathogen - hypothetical protein PMM0812 1 None None None 33861782 Nonpathogen - hypothetical protein PMM1226 5 None None None 33861152 Common thrB Homoserine kinase:GHMP kinase putative ATP-binding domain PMM0595 122 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 33861413 Common tpx thioredoxin peroxidase PMM0856 228 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 33860646 Nonpathogen - hypothetical protein PMM0086 2 None None None 33861923 Common - hypothetical protein PMM1367 13 COG4333 COG4333, Uncharacterized protein conserved in bacteria Function unknown 33860682 Common - possible heat shock protein DnaJ PMM0122 159 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 33860817 Common - hypothetical protein PMM0259 4 None None None 33861059 Common - hypothetical protein PMM0502 11 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 33860716 Common ppnK inorganic polyphosphate/ATP-NAD kinase PMM0156 227 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 33861320 Nonpathogen - hypothetical protein PMM0763 5 COG1547 COG1547, Uncharacterized conserved protein Function unknown 33860677 Nonpathogen - hypothetical protein PMM0117 9 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 33860836 Common - Phosphotransferase superclass PMM0278 241 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 33860999 Common ribE riboflavin synthase subunit alpha PMM0442 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 33861982 Nonpathogen - hypothetical protein PMM1426 1 None None None 33861867 Common - Oxygen-independent coproporphyrinogen III oxidase PMM1311 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 33861233 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase PMM0676 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 33860658 Common - possible Fe-S oxidoreductase PMM0098 27 COG1625 COG1625, Fe-S oxidoreductase, related to NifB/MoaA family Energy production and conversion 33861896 Common purD phosphoribosylglycinamide synthetase PMM1340 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 33861633 Common - adaptive-response sensory kinase PMM1077 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 33860989 Nonpathogen - hypothetical protein PMM0432 2 None None None 33860982 Common - hypothetical protein PMM0425 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 33860730 Common - NifS-like aminotransferase class-V PMM0170 235 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 33861062 Common - Possible carbohydrate kinase PMM0505 175 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 33861423 Nonpathogen - possible SMC domain N terminal domain PMM0866 1 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 33861013 Common ubiA prenyltransferase PMM0456 123 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 33861261 Common - putative potassium channel, VIC family PMM0704 194 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 33861266 Common som possible porin PMM0709 10 None None None 33861493 Common - putative SOS mutagenesis protein UmuD PMM0936 161 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 33861522 Common ureD urease accessory protein UreD PMM0966 79 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 33860565 Common - DNA gyrase/topoisomerase IV, subunit A PMM0005 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 33860641 Common cysH phosphoadenosine phosphosulfate reductase PMM0081 151 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 33861887 Nonpathogen - hypothetical protein PMM1331 5 None None None 33861501 Common - hypothetical protein PMM0944 5 None None None 33861431 Nonpathogen - possible ATP adenylyltransferase PMM0874 12 COG4360 APA2, ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) Nucleotide transport and metabolism 33861663 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ PMM1107 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 33860584 Common thiL putative thiamine-monophosphate kinase PMM0024 170 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 33861508 Common trpD/G putative Anthranilate synthase component II PMM0952 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 33861973 Common - Staphylococcus nuclease (SNase) homologues PMM1417 21 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 33861289 Nonpathogen - possible Major surface glycoprotein PMM0732 1 None None None 33861177 Common - hypothetical protein PMM0620 9 None None None 33861748 Common - CysQ protein homolog PMM1192 181 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 33860941 Common - probable periplasmic protein PMM0383 29 COG2859 COG2859, Uncharacterized protein conserved in bacteria Function unknown 33860936 Common - hypothetical protein PMM0378 5 None None None 33861363 Common - Bacterial regulatory proteins, Crp family PMM0806 5 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 33860747 Common argS arginyl-tRNA synthetase PMM0187 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33862019 Common glnB Nitrogen regulatory protein P-II PMM1463 188 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 33861916 Common - similar to DNA photolyase PMM1360 112 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 33860630 Common - putative cysteine desulfurase or selenocysteine lyase PMM0070 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 33860859 Common - 5'-methylthioadenosine phosphorylase PMM0301 132 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 33861987 Common rpoZ DNA-directed RNA polymerase subunit omega PMM1431 10 None None None 33860843 Common phr putative DNA photolyase PMM0285 134 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 33861665 Common - hypothetical protein PMM1109 10 None None None 33861625 Common folD putuative bifunctional Methylenetetrahydrofolate dehydrogenase Methenyltetrahydrofolate/cyclohydrolase PMM1069 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 33862219 Common - putative photosystem I assembly related protein Ycf37 PMM1663 24 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 33862164 Common acpP acyl carrier protein PMM1608 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33861581 Common - putative stress-induced protein OsmC PMM1025 16 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 33861199 Common cysD putative O-Acetyl homoserine sulfhydrylase PMM0642 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 33861951 Nonpathogen - hypothetical protein PMM1395 1 None None None 33861934 Common des,yocE Fatty acid desaturase, type 2 PMM1378 25 COG3239 DesA, Fatty acid desaturase Lipid metabolism 33862231 Common - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA PMM1675 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 33862110 Common rpsS 30S ribosomal protein S19 PMM1554 243 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 33861600 Common rbsK possible pfkB family carbohydrate kinase PMM1044 24 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 33861476 Common spt serine:pyruvate/alanine:glyoxylate aminotransferase PMM0919 169 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 33861443 Common - hypothetical protein PMM0886 10 None None None 33861316 Common glyS Glycyl-tRNA synthetase beta subunit PMM0759 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 33861700 Common - hypothetical protein PMM1144 67 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 33860904 Common - hypothetical protein PMM0346 8 None None None 33860770 Nonpathogen - hypothetical protein PMM0210 2 None None None 33862028 Common BioA putative diaminopelargonic acid synthase PMM1472 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 33861399 Common pmbA possible modulator of DNA gyrase PMM0842 147 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 33862184 Common - possible alpha/beta hydrolase superfamily PMM1628 78 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 33861489 Common ispE Putative 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) PMM0932 190 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 33862152 Common icd isocitrate dehydrogenase PMM1596 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 33861735 Common - putative SMR family transporter, possible pecM homologue PMM1179 80 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 33860758 Common hisC/cobC Aminotransferase class-I PMM0198 229 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 33861305 Common - possible ABC transporter component PMM0748 41 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 33861648 Common uppS Undecaprenyl pyrophosphate synthetase (UPPS) PMM1092 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 33861691 Common hli14 possible high light inducible protein PMM1135 3 None None None 33862068 Common glsF Ferredoxin-dependent glutamate synthase, Fd-GOGAT PMM1512 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 33860705 Common - hypothetical protein PMM0145 10 None None None 33860666 Common - 6-pyruvoyl tetrahydropterin synthase PMM0106 74 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 33861711 Common ppiA Cyclophilin-type peptidyl-prolyl cis-trans isomerase PMM1155 84 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 33861695 Common - possible membrane fusion protein PMM1139 162 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 33861753 Common - hypothetical protein PMM1197 8 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 33861287 Common - hypothetical protein PMM0730 68 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 33862144 Nonpathogen - possible Conserved carboxylase domain PMM1588 2 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 33862037 Common - hypothetical protein PMM1481 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 33861908 Common petF ferredoxin PMM1352 91 COG0633 Fdx, Ferredoxin Energy production and conversion 33861679 Common hupE putative hydrogenase accessory protein PMM1123 7 COG2370 HupE, Hydrogenase/urease accessory protein Posttranslational modification, protein turnover, chaperones 33862095 Common adk Adenylate kinase PMM1539 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 33861851 Nonpathogen - putative signal peptidase PMM1295 4 None None None 33861956 Nonpathogen - possible Hemagglutinin-neuraminidase PMM1400 3 None None None 33861709 Common - predicted alpha/beta hydrolase superfamily protein PMM1153 37 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 33861506 Common - hypothetical protein PMM0949 36 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 33862130 Nonpathogen - hypothetical protein PMM1574 2 None None None 33861042 Nonpathogen - hypothetical protein PMM0485 2 None None None 33862252 Common ppk polyphosphate kinase PMM1696 162 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 33862137 Common - MRP protein homolog PMM1581 239 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 33862061 Common - SAM (and some other nucleotide) binding motif PMM1505 100 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 33861794 Common - hypothetical protein PMM1238 6 None None None 33860714 Common - Bacterial regulatory protein, LuxR family PMM0154 127 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 33860783 Common aroC chorismate synthase PMM0224 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 109150043 Nonpathogen - hypothetical protein PMM1018a 1 None None None 33861375 Nonpathogen hli16 possible high light inducible protein PMM0818 1 None None None 33861830 Common thiE thiamine-phosphate pyrophosphorylase PMM1274 207 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 33861157 Common - hypothetical protein PMM0600 9 COG3597 COG3597, Uncharacterized protein/domain associated with GTPases Function unknown 33861876 Nonpathogen - hypothetical protein PMM1320 1 None None None 33860577 Common dnaJ DnaJ protein PMM0017 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 33862259 Common - NAD binding site:D-amino acid oxidase PMM1703 20 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 33860864 Common cpeS phycoerythrin linker protein CpeS homolog PMM0306 10 None None None 33861480 Common - hypothetical protein PMM0923 18 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 33861207 Nonpathogen - possible LEM domain PMM0650 1 None None None 33861296 Common - hypothetical protein PMM0739 8 None None None 33861568 Common - 4-hydroxybenzoyl-CoA thioesterase family active site PMM1012 34 COG0824 FcbC, Predicted thioesterase General function prediction only 33860917 Nonpathogen - hypothetical protein PMM0359 1 None None None 33861737 Common tyrA Chorismate mutase PMM1181 37 COG4401 AroH, Chorismate mutase Amino acid transport and metabolism 33860742 Common - hypothetical protein PMM0182 37 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 33861566 Nonpathogen - hypothetical protein PMM1010 4 None None None 33862212 Common clpP2 Clp protease proteolytic subunit PMM1656 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33861162 Common - hypothetical protein PMM0605 10 None None None 33861742 Common - putative inner membrane protein translocase component YidC PMM1186 210 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 33861641 Common - Phosphatidate cytidylyltransferase PMM1085 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 33861925 Common - GAF domain PMM1369 84 COG2203 FhlA, FOG: GAF domain Signal transduction mechanisms 33860894 Nonpathogen - plastoquinol terminal oxidase PMM0336 6 None None None 33861814 Common - pyridoxal-phosphate-dependent aminotransferase PMM1258 197 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 33860910 Common - Abortive infection protein PMM0352 9 None None None 33861620 Common crtL1 putative lycopene beta cyclase PMM1064 9 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 33861583 Nonpathogen - possible Inward rectifier potassium channel PMM1027 1 None None None 33861684 Nonpathogen hli15 possible high light inducible protein PMM1128 1 None None None 33860661 Common - hypothetical protein PMM0101 10 COG4243 COG4243, Predicted membrane protein Function unknown 33861019 Common petC Rieske iron-sulfur protein PMM0462 93 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 33861536 Nonpathogen - hypothetical protein PMM0980 1 None None None 33862246 Common - possible organic radical activating enzyme PMM1690 124 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 33861299 Common clpP1 ATP-dependent Clp protease proteolytic subunit PMM0742 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33860602 Common - flavoprotein PMM0042 99 COG0426 FpaA, Uncharacterized flavoproteins Energy production and conversion 33861112 Common - putative carboxysome peptide B PMM0555 11 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 33860595 Common DHSS soluble hydrogenase small subunit PMM0035 157 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 33861253 Nonpathogen - hypothetical protein PMM0696 1 None None None 33860968 Common - hypothetical protein PMM0411 181 COG0759 COG0759, Uncharacterized conserved protein Function unknown 33862119 Common - hypothetical protein PMM1563 9 None None None 33861246 Nonpathogen hli22 possible high light inducible protein PMM0689 1 None None None 33861772 Common - Putative sugar-phosphate nucleotidyl transferase PMM1216 104 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 33862229 Common rplI 50S ribosomal protein L9 PMM1673 209 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 33860960 Common - hypothetical protein PMM0403 10 None None None 33860800 Common txlA thioredoxin-like protein TxlA PMM0242 110 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 33860848 Common - possible ABC transporter, ATP binding component PMM0290 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 33861822 Nonpathogen - hypothetical protein PMM1266 5 None None None 33861220 Common prfC peptide chain release factor 3 PMM0663 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 33861861 Common - hypothetical protein PMM1305 234 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 33861099 Common por protochlorophyllide oxidoreductase PMM0542 54 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33861554 Nonpathogen - hypothetical protein PMM0998 4 None None None 33860562 Nonpathogen - hypothetical protein PMM0002 3 None None None 33861688 Common - hypothetical protein PMM1132 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 33861102 Common chlN light-independent protochlorophyllide reductase subunit N PMM0545 28 COG2710 NifD, Nitrogenase molybdenum-iron protein, alpha and beta chains Energy production and conversion 33860790 Nonpathogen - hypothetical protein PMM0231 2 None None None 33860778 Common obgE GTPase ObgE PMM0218 249 COG0536 Obg, Predicted GTPase General function prediction only 33861047 Common - hypothetical protein PMM0490 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 33862213 Common clpX ATP-dependent protease ATP-binding subunit PMM1657 234 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 33861115 Common - hypothetical protein PMM0558 183 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 33862025 Nonpathogen - hypothetical protein PMM1469 2 None None None 33862128 Common - S-adenosylmethionine decarboxylase proenzyme PMM1572 67 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 33861901 Common rpmA 50S ribosomal protein L27 PMM1345 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 33861949 Nonpathogen - possible Carbon storage regulator PMM1393 1 None None None 33861134 Common - Putative type II alternative sigma factor, sigma70 family PMM0577 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 33861148 Common folB Possible dihydroneopterin aldolase PMM0591 34 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 33862099 Common rplR 50S ribosomal protein L18 PMM1543 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 33861001 Common ctaE Cytochrome c oxidase, subunit III PMM0444 158 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 33861074 Nonpathogen - hypothetical protein PMM0517 1 None None None 33860729 Common - two-component response regulator PMM0169 225 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 33861185 Common - possible sodium:solute symporter, ESS family PMM0628 15 COG0786 GltS, Na+/glutamate symporter Amino acid transport and metabolism 33861880 Common - possible transporter, membrane component PMM1324 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 33861333 Common - putative uracil phosphoribosyltransferase PMM0776 123 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 33860688 Common rpaA two-component response regulator PMM0128 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 33860853 Common rub probable rubredoxin PMM0295 21 COG1773 COG1773, Rubredoxin Energy production and conversion 33861517 Common - Glycoside hydrolase family 13 PMM0961 129 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 33861117 Common hisG ATP phosphoribosyltransferase catalytic subunit PMM0560 211 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 33861304 Common pcyA phycocyanobilin:ferredoxin oxidoreductase PMM0747 11 None None None 33860913 Common - hypothetical protein PMM0355 6 COG5470 COG5470, Uncharacterized conserved protein Function unknown 33862005 Common petF ferredoxin PMM1449 79 COG0633 Fdx, Ferredoxin Energy production and conversion 33860892 Nonpathogen - hypothetical protein PMM0334 2 None None None 33860928 Common - putative cyanate ABC transporter, substrate binding protein PMM0370 107 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 33860821 Common amt1 Ammonium transporter family PMM0263 203 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 33861463 Common psaK Photosystem I PsaK protein (subunit X) PMM0906 8 None None None 33861478 Common - SAM (and some other nucleotide) binding motif:Generic methyl-transferase PMM0921 93 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33860882 Common ctpA carboxyl-terminal-processing proteinase precursor PMM0324 184 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 33861396 Common - Transcriptional-repair coupling factor PMM0839 231 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 33860698 Common plsC putative 1-acyl-sn-glycerol-3-phosphate acyltransferase PMM0138 131 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 33860622 Nonpathogen psbX photosystem II PsbX protein PMM0062 1 None None None 33861200 Common metA putative homoserine O-succinyltransferase PMM0643 63 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 33861635 Nonpathogen - possible Villin headpiece domain PMM1079 2 None None None 33861093 Common folE putative GTP cyclohydrolase I PMM0536 175 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 33862149 Common pebA dihydrobiliverdin:ferredoxin oxidoreductase PMM1593 6 None None None 33860582 Common murC Probable UDP-N-acetylmuramate-alanine ligase PMM0022 210 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 33861723 Common - Macrophage migration inhibitory factor family PMM1167 9 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 33861503 Common gatA Glutamyl-tRNA(Gln) amidotransferase A subunit PMM0946 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 33862225 Common gcsH putative Glycine cleavage H-protein PMM1669 187 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 33861407 Common - hypothetical protein PMM0850 11 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 33860689 Common holB DNA polymerase III subunit delta' PMM0129 169 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 33861204 Nonpathogen - hypothetical protein PMM0647 4 None None None 33861124 Common gshR probable glutathione reductase (NADPH) PMM0567 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 33862222 Common sqdX SqdX PMM1666 189 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861011 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PMM0454 195 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 33861379 Common K8K14.9 hypothetical protein PMM0822 10 None None None 33861453 Common dnaJ2 DnaJ2 protein PMM0896 232 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 33861229 Common - Putative phosphonate ABC transporter PMM0672 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 33860920 Nonpathogen - hypothetical protein PMM0362 1 None None None 33861400 Common tldD putative modulator of DNA gyrase; TldD PMM0843 162 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 33861914 Common - hypothetical protein PMM1358 7 COG5135 COG5135, Uncharacterized conserved protein Function unknown 33860943 Common - possible uncharacterized DNA methylase PMM0386 12 None None None 33861421 Nonpathogen - possible Fusion glycoprotein F0. PMM0864 1 None None None 33862050 Common infB translation initiation factor IF-2 PMM1494 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 33861433 Nonpathogen - hypothetical protein PMM0876 2 None None None 33861175 Common sds polyprenyl synthetase; solanesyl diphosphate synthase (sds) PMM0618 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 33861971 Common - possible UBX domain PMM1415 3 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 33860876 Common hemK putative protein methyltransferase PMM0318 225 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 33861657 Common - putative ATP-dependent RNA helicase PMM1101 243 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 33861268 Common - putative chromate transporter, CHR family PMM0711 110 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 33860874 Common - possible ferredoxin PMM0316 14 COG0633 Fdx, Ferredoxin Energy production and conversion 33861170 Common aroA EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PMM0613 236 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 33862200 Nonpathogen psbZ possible Photosystem II reaction center Z protein (PsbZ) PMM1644 1 None None None 33862271 Common - hypothetical protein PMM1715 9 None None None 33860946 Common cobI/cbiL PRECORRIN-2 C20-METHYLTRANSFERASE PMM0389 53 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 33861619 Common gyrA DNA gyrase subunit A PMM1063 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 33860984 Common - putative penicillin binding protein PMM0427 203 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 33861930 Nonpathogen - possible Type I restriction modification DNA s PMM1374 1 None None None 33861108 Common rbcS Ribulose bisphosphate carboxylase, small chain PMM0551 29 COG4451 RbcS, Ribulose bisphosphate carboxylase small subunit Energy production and conversion 33860749 Common trmE tRNA modification GTPase TrmE PMM0189 192 COG0486 ThdF, Predicted GTPase General function prediction only 33861283 Nonpathogen - hypothetical protein PMM0726 1 None None None 33860869 Common metK S-adenosylmethionine synthetase PMM0311 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 33861940 Nonpathogen hli12 possible high light inducible protein PMM1384 1 None None None 33860978 Common - putative ABC transporter, oligopeptides PMM0421 205 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 33860938 Common - hypothetical protein PMM0380 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 33862017 Common - 7-cyano-7-deazaguanine reductase PMM1461 91 COG0780 COG0780, Enzyme related to GTP cyclohydrolase I General function prediction only 33861052 Common hemC porphobilinogen deaminase PMM0495 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 33861491 Nonpathogen - hypothetical protein PMM0934 1 None None None 33860773 Common sbtA putative sodium-dependent bicarbonate transporter PMM0213 32 COG3329 COG3329, Predicted permease General function prediction only 33861219 Common - hypothetical protein PMM0662 40 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 33861366 Nonpathogen - possible S1 RNA binding domain PMM0809 1 None None None 33861187 Common GSTTLp28,P28,GSTO1 Glutathione S-transferase N terminus PMM0630 24 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 33860953 Common proC Delta 1-pyrroline-5-carboxylate reductase PMM0396 214 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 33861608 Common - hypothetical protein PMM1052 90 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 33860674 Common - hypothetical protein PMM0114 28 COG5637 COG5637, Predicted integral membrane protein Function unknown 33862156 Common - putative Na+/H+ antiporter, CPA2 family PMM1600 40 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 33861525 Common ureG urease accessory protein UreG PMM0969 133 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 33861440 Common - hypothetical protein PMM0883 104 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 33861991 Nonpathogen secG preprotein translocase subunit SecG PMM1435 1 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 33860613 Common - putative RNA methylase PMM0053 133 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 33861341 Common accD acetyl-CoA carboxylase subunit beta PMM0784 217 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 33860648 Nonpathogen - hypothetical protein PMM0088 2 None None None 33861415 Nonpathogen - hypothetical protein PMM0858 1 None None None 33861410 Nonpathogen rpmF 50S ribosomal protein L32 PMM0853 9 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 33860814 Common leuC isopropylmalate isomerase large subunit PMM0256 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 33861789 Common rfbD putative dTDP-4-dehydrorhamnose reductase PMM1233 62 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 33861702 Common pntA-2 putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) PMM1146 115 COG3288 PntA, NAD/NADP transhydrogenase alpha subunit Energy production and conversion 33861788 Common - methyltransferase PMM1232 45 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 33861898 Common kaiC circadian clock protein KaiC PMM1342 74 COG0467 RAD55, RecA-superfamily ATPases implicated in signal transduction Signal transduction mechanisms 33861650 Common - hypothetical protein PMM1094 110 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 33861348 Common - hypothetical protein PMM0791 18 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 33861739 Nonpathogen rpmH 50S ribosomal protein L34 PMM1183 2 None None None 33860679 Nonpathogen - hypothetical protein PMM0119 1 None None None 33861356 Common - hypothetical protein PMM0799 14 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 33861235 Common - quinolinate synthetase PMM0678 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 33861034 Common map methionine aminopeptidase PMM0477 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 33861050 Common cxp Carboxypeptidase Taq (M32) metallopeptidase PMM0493 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 33860997 Nonpathogen - hypothetical protein PMM0440 2 None None None 33861693 Nonpathogen - possible Cytochrome b(C-terminal)/b6/petD PMM1137 1 None None None 33860955 Common - possible Recombination protein O (RecO) PMM0398 27 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 33861697 Common cysS Cysteinyl-tRNA synthetase PMM1141 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33860975 Common - NifU-like protein PMM0418 108 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 33861435 Common ilvE branched-chain amino acid aminotransferase PMM0878 219 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 33860718 Common ndhG NADH dehydrogenase subunit J PMM0158 161 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 33861227 Common - hypothetical protein PMM0670 12 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 33861755 Common - hypothetical protein PMM1199 14 COG2246 COG2246, Predicted membrane protein Function unknown 33862117 Common - hypothetical protein PMM1561 10 COG0546 Gph, Predicted phosphatases General function prediction only 33861445 Common dapF Diaminopimelate epimerase PMM0888 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 33861761 Common - NDP-hexose 3,4-dehydratase PMM1205 191 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 33860668 Nonpathogen - hypothetical protein PMM0108 2 None None None 33861863 Nonpathogen - hypothetical protein PMM1307 2 None None None 33860706 Common - hypothetical protein PMM0146 8 None None None 33862039 Common rpoC2 DNA-directed RNA polymerase subunit beta' PMM1483 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 33862207 Common - hypothetical protein PMM1651 201 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 33861561 Nonpathogen - possible Legume lectins alpha domain PMM1005 1 None None None 33861324 Common glpX fructose 1,6-bisphosphatase II PMM0767 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 33861806 Nonpathogen - hypothetical protein PMM1250 2 None None None 33862097 Common rplO 50S ribosomal protein L15 PMM1541 213 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 33860615 Nonpathogen - hypothetical protein PMM0055 2 COG4575 ElaB, Uncharacterized conserved protein Function unknown 33861936 Common - hypothetical protein PMM1380 115 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 33861089 Common - hypothetical protein PMM0532 10 None None None 33861166 Common glgA glycogen synthase PMM0609 139 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 33861845 Common - Type II alternative RNA polymerase sigma factor, sigma-70 family PMM1289 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 33862102 Common rplE 50S ribosomal protein L5 PMM1546 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 33862044 Common hisD Histidinol dehydrogenase PMM1488 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 33862217 Common rpmI 50S ribosomal protein L35 PMM1661 142 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 33861248 Nonpathogen - hypothetical protein PMM0691 2 None None None 33861114 Nonpathogen - hypothetical protein PMM0557 2 None None None 33862145 Common purM,purG phosphoribosylaminoimidazole synthetase PMM1589 227 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 33860654 Nonpathogen - hypothetical protein PMM0094 1 None None None 33860841 Common - hypothetical protein PMM0283 58 None None None 33862031 Common gidB putative glucose inhibited division protein B PMM1475 109 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 33862182 Common - hypothetical protein PMM1626 191 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 33861980 Nonpathogen - possible Uncharacterized protein family UPF003 PMM1424 1 None None None 33861045 Common - hypothetical protein PMM0488 8 None None None 33862076 Nonpathogen psaI photosystem I reaction center subunit VIII PMM1520 2 None None None 33861474 Common - Pyridoxal-dependent decarboxylase family protein PMM0917 115 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 33862150 Common ho1 Heme oxygenase PMM1594 23 COG5398 COG5398, Heme oxygenase Inorganic ion transport and metabolism 33861314 Common - D-ala-D-ala dipeptidase PMM0757 30 COG2173 DdpX, D-alanyl-D-alanine dipeptidase Cell envelope biogenesis, outer membrane 33861670 Common - hypothetical protein PMM1114 10 None None None 33861029 Common - putative Na+/H+ antiporter, CPA1 family PMM0472 103 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 33861338 Common cbbA,cfxA,fbaA,fda fructose-1,6-bisphosphate aldolase PMM0781 174 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 33862266 Nonpathogen - hypothetical protein PMM1710 2 None None None 33861144 Nonpathogen - hypothetical protein PMM0587 2 None None None 33861255 Nonpathogen - possible DnaJ central domain (4 repeats) PMM0698 1 None None None 33860600 Common - Putative penicillin-binding protein PMM0040 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 33861968 Common - hypothetical protein PMM1412 5 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 33861616 Common hisH imidazole glycerol phosphate synthase subunit HisH PMM1060 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 33860636 Common pgm phosphoglucomutase PMM0076 182 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 33861391 Common ubiH possible 2-octaprenyl-6-methoxyphenol 4-monoxygenase; UbiH PMM0834 101 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 33861824 Common cobL putative precorrin-6y methylase PMM1268 90 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 33862244 Common aspS aspartyl-tRNA synthetase PMM1688 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861585 Common - ABC transporter component, possibly Mn transport PMM1029 186 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 33861275 Nonpathogen - possible Bacterial regulatory proteins, crp fa PMM0718 1 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 33861556 Nonpathogen - hypothetical protein PMM1000 2 None None None 33861840 Common phoH,psiH PhoH-like phosphate starvation-inducible protein PMM1284 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 33861351 Common - hypothetical protein PMM0794 10 None None None 33860992 Common ndhB NAD(P)H-quinone oxidoreductase subunit B PMM0435 207 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 33861716 Common cobB cobyric acid synthase PMM1160 150 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 33860985 Common chlG bacteriochlorophyll/chlorophyll a synthase PMM0428 106 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 33861465 Common ilvA threonine dehydratase PMM0908 195 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 33861458 Common htpG heat shock protein 90 PMM0901 151 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 33862084 Common - HNH endonuclease family protein PMM1528 97 COG1403 McrA, Restriction endonuclease Defense mechanisms 33861610 Common ruvC Crossover junction endodeoxyribonuclease RuvC PMM1054 198 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 33861377 Nonpathogen - possible EPSP synthase (3-phosphoshikimate 1-c PMM0820 1 None None None 33861022 Nonpathogen - hypothetical protein PMM0465 1 None None None 33861985 Nonpathogen - hypothetical protein PMM1429 7 None None None 33862210 Common asd aspartate Semialdehyde dehydrogenase PMM1654 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 33860809 Common psbH photosystem II reaction center protein PsbH PMM0251 8 None None None 33861044 Common - hypothetical protein PMM0487 64 COG1641 COG1641, Uncharacterized conserved protein Function unknown 33861373 Nonpathogen hli18 possible high light inducible protein PMM0816 1 None None None 33861290 Common - hypothetical protein PMM0733 12 COG4487 COG4487, Uncharacterized protein conserved in bacteria Function unknown 33861799 Common - possible methyltransferase PMM1243 9 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 33861899 Common kaiB circadian clock protein KaiB PMM1343 25 None None None 33861792 Common - hypothetical protein PMM1236 212 COG3958 COG3958, Transketolase, C-terminal subunit Carbohydrate transport and metabolism 33862136 Common rodA hypothetical protein PMM1580 203 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 33861594 Common - hypothetical protein PMM1038 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 33861954 Common hli7 possible high light inducible protein PMM1398 5 None None None 33861372 Nonpathogen hli19 possible high light inducible protein PMM0815 1 None None None 33861072 Common cobC possible alpha-ribazole-5'-P phosphatase PMM0515 184 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 33862126 Common - hypothetical protein PMM1570 139 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 33861643 Common gldA putative glycerol dehydrogenase PMM1087 78 COG0371 GldA, Glycerol dehydrogenase and related enzymes Energy production and conversion 33861515 Common - hypothetical protein PMM0959 18 COG4240 COG4240, Predicted kinase General function prediction only 33862174 Common lysS lysyl-tRNA synthetase PMM1618 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 33860576 Common grpE Heat shock protein GrpE PMM0016 230 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 33861965 Nonpathogen - possible Rubredoxin PMM1409 2 None None None 33860769 Common - possible kinase PMM0209 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 33861878 Common glgX Putative isoamylase PMM1322 145 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 33861397 Common - hypothetical protein PMM0840 22 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 33860834 Common - hypothetical protein PMM0276 14 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 33860966 Common metB putative Cystathionine gamma-synthase PMM0409 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 33860866 Nonpathogen - hypothetical protein PMM0308 3 COG0398 COG0398, Uncharacterized conserved protein Function unknown 33860744 Common pabA para-aminobenzoate synthase component II PMM0184 240 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 33861103 Nonpathogen - hypothetical protein PMM0546 2 None None None 33861160 Common - ABC transporter component, possibly Mn transport PMM0603 188 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 33861534 Common - conserved membrane protein, multidrug efflux associated PMM0978 29 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 33860712 Common - Putative sugar-phosphate nucleotidyl transferase PMM0152 236 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 33861482 Common - tRNA 2-selenouridine synthase PMM0925 65 COG2603 COG2603, Predicted ATPase General function prediction only 33861490 Common ksgA dimethyladenosine transferase PMM0933 245 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 33860635 Common - hypothetical protein PMM0075 17 COG3330 COG3330, Uncharacterized protein conserved in bacteria Function unknown 33861800 Nonpathogen - hypothetical protein PMM1244 4 None None None 33861081 Nonpathogen - Phage integrase family PMM0524 5 None None None 33862256 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PMM1700 222 COG1049 AcnB, Aconitase B Energy production and conversion 33860642 Common - putative NADH dehydrogenase, transport associated PMM0082 170 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 33861237 Common - hypothetical protein PMM0680 10 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 33860574 Common - tRNA-dihydrouridine synthase A PMM0014 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 33861417 Nonpathogen - possible Hantavirus glycoprotein G1 PMM0860 1 None None None 33861528 Common urtC putative membrane protein of urea ABC transport system PMM0972 148 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 33861727 Common isiB flavodoxin FldA PMM1171 73 COG0716 FldA, Flavodoxins Energy production and conversion 33862183 Common - Putative carbohydrate kinase PMM1627 134 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 33861603 Common - hypothetical protein PMM1047 10 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 33860931 Common cynS cyanate hydratase PMM0373 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 33860898 Nonpathogen - hypothetical protein PMM0340 4 None None None 33861892 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase PMM1336 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 33861383 Nonpathogen - hypothetical protein PMM0826 2 None None None 33861412 Nonpathogen - hypothetical protein PMM0855 1 None None None 33861106 Common csoS1 carboxysome shell protein CsoS1 PMM0549 46 COG4577 CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 33861139 Common - hypothetical protein PMM0582 14 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861126 Common pyrC dihydroorotase PMM0569 87 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 33862014 Common ftsW Cell division protein FtsW PMM1458 200 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 33861786 Common - dehydrogenase E1 component beta subunit PMM1230 148 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 33861312 Nonpathogen - possible Adenylate cyclase PMM0755 1 None None None 33861084 Nonpathogen - hypothetical protein PMM0527 2 None None None 33860832 Common - hypothetical protein PMM0274 215 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 33861699 Common - hypothetical protein PMM1143 70 COG3411 COG3411, Ferredoxin Energy production and conversion 33861527 Common urtB putative urea ABC transporter PMM0971 85 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 33861387 Common folP putative dihydropteroate synthase PMM0830 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 33861035 Common - short chain dehydrogenase PMM0478 7 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33861003 Common ctaC putative cytochrome c oxidase, subunit 2 PMM0446 139 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 33861247 Nonpathogen hli21 possible high light inducible protein PMM0690 1 None None None 33861065 Common proS prolyl-tRNA synthetase PMM0508 239 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33860672 Common rbfA Ribosome-binding factor A PMM0112 120 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 33861197 Nonpathogen - hypothetical protein PMM0640 3 None None None 33861173 Common - Cell wall hydrolase/autolysin PMM0616 101 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 33861858 Common folC putuative bifunctional Dihydrofolate/Folylpolyglutamate synthase PMM1302 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 33861680 Common - possible Natural resistance-associated macroph PMM1124 3 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 161347552 Common tpiA triosephosphate isomerase PMM0829 215 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 33861775 Common - putative nucleoside-diphosphate sugar epimerase PMM1219 231 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861076 Common tal transaldolase B PMM0519 183 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 33860988 Common - hypothetical protein PMM0431 199 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33860911 Common - Glycosyl transferase family 11 PMM0353 15 None None None 33861713 Common psbD Photosystem II PsbD protein (D2) PMM1157 21 None None None 33860720 Common ndhA NADH dehydrogenase subunit H PMM0160 192 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 33861511 Common msrA Peptide methionine sulfoxide reductase PMM0955 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 33861518 Common - possible Vng0271c PMM0962 40 None None None 33860945 Common - putative similar to tRNA-(MS[2]IO[6]A)-hydroxylase PMM0388 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 33861367 Nonpathogen - hypothetical protein PMM0810 1 None None None 33861217 Nonpathogen - possible RNA recognition motif. (a.k.a. RRM, R PMM0660 1 None None None 33861265 Common - putative secreted protein PMM0708 40 COG4222 COG4222, Uncharacterized protein conserved in bacteria Function unknown 33861744 Common serS seryl-tRNA synthetase PMM1188 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861978 Common - hypothetical protein PMM1422 64 COG3019 COG3019, Predicted metal-binding protein General function prediction only 33860873 Common psbB Photosystem II PsbB protein (CP47) PMM0315 10 None None None 33860812 Common - hypothetical protein PMM0254 9 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 33861176 Common acs acetyl-coenzyme A synthetase PMM0619 217 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 33862228 Common des9 Fatty acid desaturase, type 1 PMM1672 70 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 33860863 Common cpeB Phycobilisome protein PMM0305 10 None None None 33862035 Nonpathogen - hypothetical protein PMM1479 7 None None None 33862206 Common - hypothetical protein PMM1650 10 None None None 33861183 Nonpathogen - hypothetical protein PMM0626 1 None None None 33861250 Nonpathogen - possible Hepatitis C virus envelope glycoprote PMM0693 1 None None None 33861551 Nonpathogen - hypothetical protein PMM0995 1 None None None 33860922 Nonpathogen - possible Malic enzyme PMM0364 2 None None None 33862264 Nonpathogen - hypothetical protein PMM1708 3 None None None 33862063 Common rpsJ 30S ribosomal protein S10 PMM1507 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 33860738 Common gshB glutathione synthetase PMM0178 141 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 33862238 Common valS valyl-tRNA synthetase PMM1682 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861343 Common leuB 3-isopropylmalate dehydrogenase PMM0786 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 33860781 Common - aspartoacylase PMM0222 13 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 33860611 Common - hypothetical protein PMM0051 38 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 33862190 Common gyrB DNA gyrase subunit B PMM1634 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 33861630 Common zwf glucose-6-phosphate 1-dehydrogenase PMM1074 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 33861652 Common lipA,lip lipoyl synthase PMM1096 191 COG0320 LipA, Lipoate synthase Coenzyme metabolism 33862129 Common recF putative DNA repair and genetic recombination protein RecF PMM1573 100 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 33861926 Common - hypothetical protein PMM1370 135 COG2081 COG2081, Predicted flavoproteins General function prediction only 33862011 Common - F0F1 ATP synthase subunit C PMM1455 43 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 33861202 Common - FAD linked oxidase, N-terminal PMM0645 15 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 33860587 Common accB,fabE Biotin / Lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit PMM0027 176 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 33860695 Common plsX fatty acid/phospholipid synthesis protein PMM0135 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 33860657 Common - possible RND family outer membrane efflux protein PMM0097 74 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 33861996 Common - hypothetical protein PMM1440 9 None None None 33861816 Common - Nucleoside-diphosphate-sugar epimerase PMM1260 230 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861864 Common - hypothetical protein PMM1308 7 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 33860826 Common - hypothetical protein PMM0268 10 None None None 33861904 Common spoIID possible sporulation protein SpoIID PMM1348 48 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 33862122 Common - hypothetical protein PMM1566 49 COG1233 COG1233, Phytoene dehydrogenase and related proteins Secondary metabolites biosynthesis, transport, and catabolism 33860727 Common purE Phosphoribosylaminoimidazole carboxylase PMM0167 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 33861659 Common recB possible UvrD/REP helicase subunit B PMM1103 214 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 33861725 Nonpathogen - hypothetical protein PMM1169 1 None None None 33862195 Common secA preprotein translocase subunit SecA PMM1639 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 33861094 Common trpF phosphoribosylanthranilate isomerase PMM0537 192 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 33861637 Common malQ Putative 4-alpha-glucanotransferase PMM1081 114 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 33862162 Common glmS D-fructose-6-phosphate amidotransferase PMM1606 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 33861466 Common - hypothetical protein PMM0909 40 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 33861882 Common - hypothetical protein PMM1326 10 None None None 33861055 Common - hypothetical protein PMM0498 3 None None None 33861226 Common - hypothetical protein PMM0669 48 COG1836 COG1836, Predicted membrane protein Function unknown 33862046 Common - Serine protease PMM1490 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 33862147 Common - Low molecular weight phosphotyrosine protein phosphatase PMM1591 127 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 33861807 Common - Carbamoyltransferase PMM1251 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 33861017 Common yvoC prolipoprotein diacylglyceryl transferase PMM0460 126 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 33860794 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C PMM0235 151 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 33860974 Nonpathogen - hypothetical protein PMM0417 1 None None None 33860598 Nonpathogen - hypothetical protein PMM0038 1 None None None 33861754 Nonpathogen - hypothetical protein PMM1198 1 None None None 33861596 Common - Transglutaminase-like superfamily PMM1040 95 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 33860798 Common trmB tRNA (guanine-N(7))-methyltransferase PMM0240 91 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 33861259 Nonpathogen - possible DUP family PMM0702 1 None None None 33861068 Common ppa Inorganic pyrophosphatase PMM0511 185 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 33861390 Common - hypothetical protein PMM0833 8 None None None 33861109 Common csoS2 carboxysome shell protein CsoS2 PMM0552 10 None None None 33860775 Common - delta-aminolevulinic acid dehydratase PMM0215 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 33861468 Common - hypothetical protein PMM0911 12 COG1694 MazG, Predicted pyrophosphatase General function prediction only 33861211 Nonpathogen - hypothetical protein PMM0654 2 None None None 33862089 Common truA tRNA pseudouridine synthase A PMM1533 235 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 33861516 Common - mannosyl-3-phosphoglycerate phosphatase PMM0960 31 COG3769 COG3769, Predicted hydrolase (HAD superfamily) General function prediction only 33861771 Common - hypothetical protein PMM1215 93 COG0579 COG0579, Predicted dehydrogenase General function prediction only 33861738 Nonpathogen - hypothetical protein PMM1182 2 None None None 33861872 Common cobD putative cobalamin biosynthetic protein PMM1316 146 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 33862026 Common - hypothetical protein PMM1470 10 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33861136 Common - hypothetical protein PMM0579 7 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 33860710 Common ndhD NAD(P)H-quinone oxidoreductase subunit D PMM0150 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 33862074 Common - conserved hypothetical proein PMM1518 62 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 33861797 Nonpathogen - hypothetical protein PMM1241 4 None None None 33861563 Nonpathogen - hypothetical protein PMM1007 1 None None None 33860820 Common - putative sugar fermentation stimulation protein PMM0262 105 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 33861194 Common fur Ferric uptake regulator family PMM0637 201 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 33861370 Nonpathogen - hypothetical protein PMM0813 1 None None None 33861558 Common pepN probable aminopeptidase N PMM1002 158 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 33860623 Common - hypothetical protein PMM0063 10 None None None 33860807 Common - hypothetical protein PMM0249 10 None None None 33861292 Nonpathogen - hypothetical protein PMM0735 2 None None None 33860887 Common psaE photosystem I reaction center subunit IV PMM0329 10 None None None 33860969 Nonpathogen - hypothetical protein PMM0412 2 None None None 33861921 Nonpathogen - possible MATH domain PMM1365 1 None None None 33861146 Nonpathogen - hypothetical protein PMM0589 8 None None None 33860851 Common ndhK NADH dehydrogenase subunit B PMM0293 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 33860608 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B PMM0048 214 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 33861053 Common sigA RNA polymerase sigma factor RpoD PMM0496 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 33861483 Common psb28 possible Photosystem II reaction center Psb28 protein PMM0926 10 None None None 33861257 Nonpathogen - hypothetical protein PMM0700 2 None None None 33861075 Common ftsI putative peptidoglycan synthetase (pbp transpeptidase domain) PMM0518 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 33861865 Common ftsZ cell division protein FtsZ PMM1309 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 33861790 Common - Zinc-containing alcohol dehydrogenase superfamily PMM1234 209 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 33861826 Common pheS Phenylalanyl-tRNA synthetase alpha chain PMM1270 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 33861273 Common - putative arsenite transporter, ACR3 family PMM0716 128 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 33862065 Common fusA elongation factor G PMM1509 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 33860601 Common - possible reductase PMM0041 45 COG0431 COG0431, Predicted flavoprotein General function prediction only 33860829 Common tgt tRNA-guanine transglycosylase PMM0271 230 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 33862053 Common - Glycosyl transferase, family 2 PMM1497 99 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33861842 Common ffh signal recognition particle protein (SRP54) PMM1286 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 33861451 Common - Cyclophilin-type peptidyl-prolyl cis-trans isomerase PMM0894 200 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 33860957 Common lrtA light repressed protein A homolog PMM0400 139 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 33861533 Common - putative multidrug efflux ABC transporter PMM0977 24 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 33860990 Common BirA putative Biotin--acetyl-CoA-carboxylase ligase PMM0433 128 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 33861278 Nonpathogen - possible Myosin N-terminal SH3-like domain PMM0721 1 None None None 33860847 Common - possible ABC transporter PMM0289 16 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 33861295 Nonpathogen - hypothetical protein PMM0738 2 None None None 33861829 Common ribF putative riboflavin kinase/FAD synthase PMM1273 211 COG0196 RibF, FAD synthase Coenzyme metabolism 33860581 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase PMM0021 203 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 33860950 Common - hypothetical protein PMM0393 10 None None None 33861831 Common - DUF170 PMM1275 13 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 33861164 Common menD Menaquinone biosynthesis protein; probable 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase PMM0607 77 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 33862155 Common - hypothetical protein PMM1599 22 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 33862247 Common - hypothetical ATPase PMM1691 178 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 33861676 Common - Sulfotransferase:TPR repeat PMM1120 64 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 33862033 Common - hypothetical protein PMM1477 13 COG1141 Fer, Ferredoxin Energy production and conversion 33860964 Common cysK1 O-acetylserine (thiol)-lyase A PMM0407 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 33860750 Common - hypothetical protein PMM0190 15 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 33861588 Common - ABC transporter, substrate binding protein, possibly Mn. PMM1032 73 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 33862004 Nonpathogen - hypothetical protein PMM1448 1 None None None 33861756 Common - Glycosyl transferase, family 2 PMM1200 140 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33861609 Common - hypothetical protein PMM1053 48 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 33861672 Common gidA tRNA (uracil-5-)-methyltransferase Gid PMM1116 91 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 33861499 Common ruvA putative holliday junction DNA helicase RuvA PMM0942 207 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 33861963 Nonpathogen - possible SRP19 protein PMM1407 1 None None None 33861030 Common gltX glutamyl-tRNA synthetase PMM0473 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 33861358 Common ycf39 hypothetical protein PMM0801 55 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861623 Nonpathogen - possible Adenoviral fiber protein (repeat/shaf PMM1067 2 None None None 33862114 Common rplC 50S ribosomal protein L3 PMM1558 216 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 33862168 Nonpathogen - hypothetical protein PMM1612 1 None None None 33860861 Common - tRNA nucleotidyltransferase/poly(A) polymerase PMM0303 164 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 33861933 Common - similar to dihydroflavonol-4-reductase PMM1377 65 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33862262 Common rpsF 30S ribosomal protein S6 PMM1706 187 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 33861224 Common - hypothetical protein PMM0667 10 None None None 33861282 Common - putative phosphate ABC transporter, ATP binding subunit PMM0725 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 33860618 Common - hypothetical protein PMM0058 10 COG1873 COG1873, Uncharacterized conserved protein Function unknown 33861547 Nonpathogen - possible Paired amphipathic helix repeat PMM0991 1 None None None 33861747 Common pnp polynucleotide phosphorylase/polyadenylase PMM1191 234 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 33861715 Common - Maf-like protein PMM1159 168 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 33860662 Common - possible Fe-S oxidoreductase PMM0102 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 33860868 Common - Carbohydrate kinase, FGGY family PMM0310 35 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 33860763 Common rplA 50S ribosomal protein L1 PMM0203 248 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 33860708 Common - hypothetical protein PMM0148 14 COG4094 COG4094, Predicted membrane protein Function unknown 33861809 Nonpathogen - possible methyltransferase PMM1253 3 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33860701 Common - Poly A polymerase family PMM0141 162 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 33861430 Nonpathogen - possible DnaJ domain PMM0873 2 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 33861802 Common - Carbamoyltransferase PMM1246 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 33860908 Nonpathogen - possible TIR domain PMM0350 1 None None None 33860702 Common - RNA-binding region RNP-1 (RNA recognition motif) PMM0142 21 COG0724 COG0724, RNA-binding proteins (RRM domain) General function prediction only 33861572 Nonpathogen - possible Virion host shutoff protein PMM1016 1 None None None 33860995 Nonpathogen - hypothetical protein PMM0438 8 COG4241 COG4241, Predicted membrane protein Function unknown 33861612 Common - probable tRNA/rRNA methyltransferase PMM1056 154 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 33861668 Nonpathogen - hypothetical protein PMM1112 5 None None None 33861983 Nonpathogen - hypothetical protein PMM1427 2 None None None 161347554 Common mqo malate:quinone oxidoreductase PMM0419 58 COG0579 COG0579, Predicted dehydrogenase General function prediction only 33861763 Common - Putative fucose synthetase PMM1207 207 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33860855 Common psbE cytochrome b559 subunit alpha PMM0297 10 None None None 33862091 Common rpoA DNA-directed RNA polymerase subunit alpha PMM1535 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 33861024 Common gmk Guanylate kinase PMM0467 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 33862104 Common rplN 50S ribosomal protein L14 PMM1548 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 33860903 Common - putative bacterioferritin comigratory protein PMM0345 224 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 33860670 Common - putative glutathione S-transferase PMM0110 37 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 33862072 Nonpathogen - hypothetical protein PMM1516 1 None None None 33861661 Common recC possible exodeoxyribonuclease V subunit C 125 kD polypeptide PMM1105 64 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 33860889 Common - Putative aldehyde dehydrogenase PMM0331 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 33861067 Nonpathogen - possible Reverse transcriptase (RNA-dependent PMM0510 1 None None None 33861495 Nonpathogen - possible Serine hydroxymethyltransferase PMM0938 2 None None None 33861230 Common - Putative phosphonate binding protein for ABC transporter PMM0673 59 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 33861777 Common - Glycosyl transferase, group 1 PMM1221 92 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 33861497 Common - Integral membrane protein, DUF6 PMM0940 123 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 33860616 Nonpathogen - hypothetical protein PMM0056 2 None None None 33860842 Common degT putative pleiotropic regulatory protein PMM0284 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 33860933 Nonpathogen - possible Type II intron maturase PMM0375 1 None None None 33860563 Common purL phosphoribosylformylglycinamidine synthase II PMM0003 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 33861215 Common rsuA putative pseudouridylate synthase specific to ribosomal small subunit PMM0658 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 33861260 Common - hypothetical protein PMM0703 14 COG4446 COG4446, Uncharacterized protein conserved in bacteria Function unknown 33860760 Common rnhA possible ribonuclease HI PMM0200 174 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 33861945 Common - possible Trypsin PMM1389 8 None None None 33861263 Common phoR two-component sensor histidine kinase, phosphate sensing PMM0706 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 33861856 Common murA UDP-N-glucosamine 1-carboxyvinyltransferase PMM1300 208 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 33860947 Common - hypothetical protein PMM0390 10 None None None 33861171 Common - 2-phosphosulfolactate phosphatase PMM0614 40 COG2045 COG2045, Phosphosulfolactate phosphohydrolase and related enzymes Coenzyme metabolism / General function prediction only 33862188 Common - hypothetical protein PMM1632 26 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 33861097 Nonpathogen psaM photosystem I reaction center subunit XII PMM0540 1 None None None 33860733 Common - hypothetical protein PMM0173 14 COG0824 FcbC, Predicted thioesterase General function prediction only 33862082 Nonpathogen hisB putative imidazoleglycerol-phosphate dehydratase PMM1526 12 COG0546 Gph, Predicted phosphatases General function prediction only 33860818 Nonpathogen - hypothetical protein PMM0260 2 None None None 33861015 Common - hypothetical protein PMM0458 20 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 33861242 Nonpathogen - hypothetical protein PMM0685 2 None None None 33861924 Common - hypothetical protein PMM1368 19 COG3556 COG3556, Predicted membrane protein Function unknown 33861426 Common rpsR 30S ribosomal protein S18 PMM0869 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 33862181 Common ahcY S-adenosyl-L-homocysteine hydrolase PMM1625 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 33860940 Nonpathogen - possible Ribosomal RNA adenine dimethylase PMM0382 1 None None None 33862192 Common infC translation initiation factor IF-3 PMM1636 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 33861576 Nonpathogen - hypothetical protein PMM1020 2 None None None 33861239 Common aroB 3-dehydroquinate synthase PMM0682 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 33861574 Nonpathogen - hypothetical protein PMM1018 1 COG5470 COG5470, Uncharacterized conserved protein Function unknown 33861249 Nonpathogen - possible DDT domain PMM0692 1 None None None 33861598 Common - conserved hpothetical protein PMM1042 34 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 33862132 Common - hypothetical protein PMM1576 18 COG2170 COG2170, Uncharacterized conserved protein Function unknown 33861414 Nonpathogen - possible Influenza RNA-dependent RNA polymeras PMM0857 1 None None None 33862139 Nonpathogen - hypothetical protein PMM1583 6 None None None 33861037 Common - hypothetical protein PMM0480 10 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 33861521 Common ureA urease subunit gamma PMM0965 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 33862016 Common ycf44 putative c-type cytochrome biogenesis protein Ccs1 PMM1460 11 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 33861885 Common tyrS tyrosyl-tRNA synthetase PMM1329 240 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861381 Common - hypothetical protein PMM0824 9 None None None 33862257 Common - putative chloride channel PMM1701 144 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 33862250 Common cobA putative uroporphyrin-III C-methyltransferase PMM1694 204 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 33861894 Common - chloroplast outer envelope membrane protein homolog PMM1338 139 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 33861086 Common - hypothetical protein PMM0529 10 None None None 33861385 Common - S4 domain PMM0828 36 COG2501 COG2501, Uncharacterized conserved protein Function unknown 33861360 Common futC ABC transporter, ATP binding component, possibly iron transporter PMM0803 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 33861654 Common psbP photosystem II oxygen evolving complex protein PsbP PMM1098 9 None None None 33861783 Common - putative UDP-N-acetylglucosamine-1-phosphate transferase PMM1227 226 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 33861083 Common ilvH acetolactate synthase 3 catalytic subunit PMM0526 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 33861361 Common - ferritin PMM0804 72 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 33861605 Common - ABC transporter, substrate binding protein, possibly oligopeptides PMM1049 178 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 33861195 Common - hypothetical protein PMM0638 32 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 33862124 Nonpathogen - hypothetical protein PMM1568 2 None None None 33862197 Nonpathogen - hypothetical protein PMM1641 2 COG2246 COG2246, Predicted membrane protein Function unknown 33861158 Common - ABC transporter, substrate binding protein, possibly Mn PMM0601 168 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 33861000 Nonpathogen - hypothetical protein PMM0443 4 None None None 33861541 Nonpathogen - putative PURINE PHOSPHORIBOSYLTRANSFERASE related protein PMM0985 4 COG2236 COG2236, Predicted phosphoribosyltransferases General function prediction only 33861252 Common - Glutamine amidotransferase class-I PMM0695 83 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 33860571 Common - Protein phosphatase 2C domain PMM0011 109 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 33860684 Common - conserved hypothetical protein in cyanobacteria PMM0124 10 None None None 33861057 Common - hypothetical protein PMM0500 9 None None None 33860824 Common purH AICARFT/IMPCHase bienzyme:Methylglyoxal synthase-like domain PMM0266 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 33862021 Common purB adenylosuccinate lyase PMM1465 235 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 33861078 Common frr ribosome recycling factor PMM0521 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 33861766 Common - Putative nucleotide sugar epimerase PMM1210 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33860796 Common ileS isoleucyl-tRNA synthetase PMM0238 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861507 Common carA carbamoyl phosphate synthase small subunit PMM0951 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 33862078 Common - Glycosyl transferase, family 2 PMM1522 219 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33861300 Common ftsH1 FtsH ATP-dependent protease homolog PMM0743 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 33862242 Common - Arginase family PMM1686 145 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 33860757 Common murG Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase PMM0197 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 33862157 Common - phosphorylase PMM1601 141 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 33861918 Nonpathogen - hypothetical protein PMM1362 1 None None None 33861307 Common - ABC transporter, ATP-binding component PMM0750 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 33861182 Nonpathogen - hypothetical protein PMM0625 1 None None None 33860626 Nonpathogen - hypothetical protein PMM0066 2 None None None 33861208 Nonpathogen - possible VHS domain PMM0651 2 None None None 33862111 Common rplB 50S ribosomal protein L2 PMM1555 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 33860685 Common - possible ABC transporter, ATP-binding component PMM0125 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 33861553 Nonpathogen - possible Protein of unknown function DUF67 PMM0997 1 None None None 33862105 Common rpsQ 30S ribosomal protein S17 PMM1549 219 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 33861419 Common - putative tRNA/rRNA methyltransferase (SpoU family) PMM0862 156 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 33860651 Nonpathogen - hypothetical protein PMM0091 2 None None None 33861513 Nonpathogen - possible GRAM domain PMM0957 1 None None None 33860777 Common mutS putative DNA mismatch repair protein MutS family PMM0217 202 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 33861026 Common psaF Photosystem I PsaF protein (subunit III) PMM0469 10 None None None 33861548 Nonpathogen - hypothetical protein PMM0992 2 None None None 33860924 Nonpathogen - Type-1 copper (blue) domain PMM0366 1 COG3794 PetE, Plastocyanin Energy production and conversion 33860871 Common - hypothetical protein PMM0313 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 33861539 Nonpathogen - possible ATP synthase protein 8 PMM0983 1 None None None 33860792 Common pyrB aspartate carbamoyltransferase catalytic subunit PMM0233 239 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 33860896 Nonpathogen - hypothetical protein PMM0338 2 None None None 33861322 Common - possible heme transporter PMM0765 168 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 33861811 Nonpathogen - hypothetical protein PMM1255 1 None None None 33860585 Common - Cyclophilin-type peptidyl-prolyl cis-trans isomerase PMM0025 30 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 33861120 Common - hypothetical protein PMM0563 112 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33862140 Common rnd putative ribonuclease D PMM1584 85 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 33862141 Nonpathogen - hypothetical protein PMM1585 1 None None None 33861127 Common ndhL NADH dehydrogenase subunit NdhL (ndhL) PMM0570 9 None None None 33861404 Common zam putative acetazolamide conferring resistance protein Zam PMM0847 102 COG0557 VacB, Exoribonuclease R Transcription 33860971 Common - putative short chain dehydrogenase PMM0414 62 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33861401 Common PNIL34,AT103 phytochrome-regulated gene PMM0844 19 None None None 33860693 Common radA DNA repair protein RadA PMM0133 227 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 33861998 Common pepP putative aminopeptidase P PMM1442 231 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 33861071 Common - putative dihydroorotase PMM0514 98 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 33862107 Common rplP 50S ribosomal protein L16 PMM1551 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 33860568 Common - hypothetical protein PMM0008 80 COG2928 COG2928, Uncharacterized conserved protein Function unknown 33861828 Common - hypothetical protein PMM1272 9 None None None 33860784 Common - possible 2-keto-3-deoxy-6-phosphogluconate aldolase PMM0225 4 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 33861962 Nonpathogen - hypothetical protein PMM1406 1 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 33861682 Common - Domain of unknown function DUF33 PMM1126 83 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 33861276 Nonpathogen - hypothetical protein PMM0719 2 None None None 33861749 Common - putative tetrapyrrole methylase family protein PMM1193 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 33861646 Common lysA Diaminopimelate decarboxylase PMM1090 219 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 33860604 Common alaS alanyl-tRNA synthetase PMM0044 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861346 Common - hypothetical protein PMM0789 41 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 33860606 Common - Nucleoside diphosphate kinase PMM0046 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 33861429 Nonpathogen - possible Carboxylesterase PMM0872 2 None None None 33861192 Common - small mechanosensitive ion channel, MscS family PMM0635 98 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 33861844 Common pdhA Pyruvate dehydrogenase E1 alpha subunit PMM1288 155 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 33860962 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 PMM0405 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 33860632 Common - ABC transporter, ATP binding component PMM0072 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 33861061 Nonpathogen - CutA1 divalent ion tolerance protein PMM0504 1 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 33862249 Common - Aminotransferase class-IV PMM1693 68 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 33861686 Nonpathogen - hypothetical protein PMM1130 1 None None None 33861111 Common - putative carboxysome peptide A PMM0554 11 COG4576 CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion 33862080 Common psaA photosystem I P700 chlorophyll a apoprotein A1 PMM1524 11 None None None 33860845 Common folK possible 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase PMM0287 60 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 33861271 Common - Bacterial regulatory proteins, ArsR family PMM0714 170 COG0640 ArsR, Predicted transcriptional regulators Transcription 33861110 Nonpathogen csoS3 carboxysome shell protein CsoS3 PMM0553 7 None None None 33860830 Nonpathogen - photosystem II reaction center protein PsbK precursor PMM0272 1 None None None 33860805 Nonpathogen - hypothetical protein PMM0247 3 COG4372 COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain Function unknown 33861615 Common - hypothetical protein PMM1059 192 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 33861895 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase PMM1339 191 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 33861913 Nonpathogen - Steroid 5-alpha reductase, C-terminal domain PMM1357 5 COG2020 STE14, Putative protein-S-isoprenylcysteine methyltransferase Posttranslational modification, protein turnover, chaperones 33861729 Common - hypothetical protein PMM1173 27 COG4095 COG4095, Uncharacterized conserved protein Function unknown 33861860 Common codA possible cytosine deaminase PMM1304 64 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 33862166 Common tktA transketolase PMM1610 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 33861154 Common thrS Threonyl-tRNA synthetase PMM0597 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33861768 Common - hypothetical protein PMM1212 3 COG4627 COG4627, Uncharacterized protein conserved in bacteria Function unknown 33862159 Common rnc putative ribonuclease III PMM1603 210 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 33862100 Common rplF 50S ribosomal protein L6 PMM1544 245 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 33861884 Common pyrF orotidine 5'-phosphate decarboxylase PMM1328 152 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 33861393 Common - hypothetical protein PMM0836 3 None None None 33861958 Nonpathogen - hypothetical protein PMM1402 1 None None None 33862240 Common mazG nucleoside triphosphate pyrophosphohydrolase PMM1684 156 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 33861138 Common petE plastocyanin PMM0581 33 COG3794 PetE, Plastocyanin Energy production and conversion 33861795 Common hetA ABC transporter PMM1239 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 33861505 Common - tRNA/rRNA methyltransferase PMM0948 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 33861471 Common - hypothetical protein PMM0914 13 COG1268 BioY, Uncharacterized conserved protein General function prediction only 33861874 Nonpathogen - hypothetical protein PMM1318 1 None None None 33861318 Common - putative carboxypeptidase PMM0761 38 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 33860653 Common hli1 possible high light inducible protein PMM0093 6 None None None 33860628 Common def peptide deformylase PMM0068 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 33861818 Common lexA SOS function regulatory protein, LexA repressor PMM1262 163 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 33860765 Common nusG transcription antitermination protein NusG PMM0205 214 COG0250 NusG, Transcription antiterminator Transcription 33860740 Common prfB peptide chain release factor 2 PMM0180 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 33860591 Common - HNH endonuclease:HNH nuclease PMM0031 34 COG1403 McrA, Restriction endonuclease Defense mechanisms 33861485 Common secF preprotein translocase subunit SecF PMM0928 200 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 33861441 Common coaD putative pantetheine-phosphate adenylyltransferase PMM0884 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 33861969 Nonpathogen - hypothetical protein PMM1413 3 None None None 33860789 Nonpathogen - hypothetical protein PMM0230 2 None None None 33861376 Nonpathogen - hypothetical protein PMM0819 1 None None None 33861140 Common hemE uroporphyrinogen decarboxylase PMM0583 183 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 33861804 Nonpathogen - hypothetical protein PMM1248 1 None None None 33861331 Common ilvD dihydroxy-acid dehydratase PMM0774 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 33861159 Common - ABC transporter, ATP binding domain, possibly Mn transporter PMM0602 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 33862235 Common lig ATP-dependent DNA ligase PMM1679 64 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 33860993 Common topA DNA topoisomerase I PMM0436 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 33861100 Common chlL protochlorophyllide reductase iron-sulfur ATP-binding protein PMM0543 70 COG1348 NifH, Nitrogenase subunit NifH (ATPase) Inorganic ion transport and metabolism 33860802 Common dcd deoxycytidine triphosphate deaminase PMM0244 135 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 33861244 Nonpathogen - hypothetical protein PMM0687 2 None None None 33860664 Common - hypothetical protein PMM0104 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 33860724 Common trpB tryptophan synthase subunit beta PMM0164 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 33862093 Common rpsM 30S ribosomal protein S13 PMM1537 237 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 33862215 Common - Glycosyl transferase, family 2 PMM1659 155 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 33860644 Common - possible sodium transporter, Trk family PMM0084 84 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 33860704 Common pds,crtD phytoene desaturase PMM0144 47 COG3349 COG3349, Uncharacterized conserved protein Function unknown 33861690 Nonpathogen - possible Phosphatidylinositol-specific phospho PMM1134 1 None None None 33861531 Nonpathogen - hypothetical protein PMM0975 2 None None None 33861328 Common - Putative 6-phosphogluconolactonase (DevB, Pgl) PMM0771 67 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 33861284 Common - Serine/threonine specific protein phosphatase PMM0727 48 COG1407 COG1407, Predicted ICC-like phosphoesterases General function prediction only 33861432 Common - hypothetical protein PMM0875 42 COG3651 COG3651, Uncharacterized protein conserved in bacteria Function unknown 33862204 Common lysC aspartate kinase PMM1648 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 33861222 Common hsp33 Hsp33 protein PMM0665 119 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 33861448 Common purN phosphoribosylglycinamide formyltransferase PMM0891 225 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 33861758 Common - possible nucleoside-diphosphate-sugar epimerase PMM1202 223 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 33861621 Common - hypothetical protein PMM1065 35 COG1543 COG1543, Uncharacterized conserved protein Function unknown 33862153 Common - hypothetical protein PMM1597 25 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 33861705 Nonpathogen - hypothetical protein PMM1149 2 None None None 33860752 Common - ABC transporter, ATP binding component, possibly for oligopeptides PMM0192 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 33861666 Common - BolA-like protein PMM1110 79 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 33860901 Common - mttA/Hcf106 family PMM0343 73 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 33860952 Common - hypothetical protein PMM0395 48 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 33861837 Common era GTP-binding protein Era PMM1281 218 COG1159 Era, GTPase General function prediction only 33862002 Common - Carbon-nitrogen hydrolase:NAD+ synthase PMM1446 207 COG0171 NadE, NAD synthase Coenzyme metabolism 33861953 Nonpathogen hli8 possible high light inducible protein PMM1397 1 None None None 33861903 Common truB Putative tRNA pseudouridine 55 synthase PMM1347 243 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 33862087 Common rpsI 30S ribosomal protein S9 PMM1531 243 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 33862009 Common atpF F0F1 ATP synthase subunit B PMM1453 58 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 33861674 Nonpathogen hli4 possible high light inducible protein PMM1118 1 None None None 33862055 Common clpS ATP-dependent Clp protease adaptor protein ClpS PMM1499 14 COG2127 COG2127, Uncharacterized conserved protein Function unknown 33861678 Common apt adenine phosphoribosyltransferase PMM1122 171 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 33862260 Common dnaK molecular chaperone DnaK PMM1704 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 33861947 Nonpathogen - possible Helix-turn-helix protein, copG family PMM1391 1 None None None 33862171 Common ruvB Holliday junction DNA helicase B PMM1615 215 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 33861733 Common - hypothetical protein PMM1177 81 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 33861487 Common pdhB Pyruvate dehydrogenase E1 beta subunit PMM0930 197 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 33861740 Nonpathogen rnpA Bacterial ribonuclease P protein component PMM1184 2 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 33861310 Common rpsB 30S ribosomal protein S2 PMM0753 217 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 33861707 Common infA translation initiation factor IF-1 PMM1151 206 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 33861849 Common - FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) PMM1293 157 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones