Chlamydophila pneumoniae TW-183, complete genome NC_005043 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 33241541 Pathogen - hypothetical protein CpB0206 1 None None None 33241404 Pathogen - F25H5.5 CpB0069 1 None None None 33241825 Pathogen - hypothetical protein CpB0492 1 None None None 33241444 Pathogen - hypothetical protein CpB0109 1 None None None 33241377 Common - phosphoenolpyruvate-protein phosphotransferase CpB0042 229 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 33241930 Pathogen - hypothetical protein CpB0599 1 None None None 33242223 Common - phosphoglyceromutase CpB0892 155 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 33241467 Pathogen - hypothetical protein CpB0132 1 None None None 33241989 Common rplR 50S ribosomal protein L18 CpB0658 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 33242170 Pathogen - hypothetical protein CpB0839 2 None None None 33242158 Common - hypothetical protein CpB0827 15 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 33242130 Common - RNA polymerase factor sigma-54 CpB0799 144 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 33241964 Pathogen - hypothetical protein CpB0633 2 None None None 33242186 Common - type III secretion system protein CpB0855 51 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 33241430 Common pknD serine/threonine-protein kinase CpB0095 153 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 33241918 Pathogen - sensory transduction regulatory protein CpB0587 1 None None None 33242282 Common - leucine dehydrogenase CpB0951 116 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 33241452 Common rpsP 30S ribosomal protein S16 CpB0117 195 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 33242236 Common - D-alanine/glycine transport protein, sodium-dependent CpB0905 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 33242216 Common - UDP-N-acetylglucosamine pyrophosphorylase CpB0885 8 COG4284 COG4284, UDP-glucose pyrophosphorylase Carbohydrate transport and metabolism 33241998 Common rpsC 30S ribosomal protein S3 CpB0667 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 33241508 Common - GMP synthase CpB0173 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 33241482 Pathogen - hypothetical protein CpB0147 1 None None None 33242294 Pathogen - hypothetical protein CpB0963 1 None None None 33241703 Common - tyrosyl-tRNA synthetase CpB0370 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241459 Common - exodeoxyribonuclease V 67K chain CpB0124 148 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 33241928 Common bltD spermine/spermidine acetyltransferase CpB0597 42 COG0456 RimI, Acetyltransferases General function prediction only 33241418 Common - transaldolase B CpB0083 177 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 33242440 Pathogen - hypothetical protein CpB1110 1 None None None 33241657 Common acpS 4'-phosphopantetheinyl transferase CpB0323 107 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 33241411 Common nusG transcription antitermination protein NusG CpB0076 214 COG0250 NusG, Transcription antiterminator Transcription 33241426 Common ntpI V-type ATP synthase subunit I CpB0091 28 COG1269 NtpI, Archaeal/vacuolar-type H+-ATPase subunit I Energy production and conversion 33241764 Pathogen - hypothetical protein CpB0431 2 None None None 33242028 Pathogen - hypothetical protein CpB0697 3 None None None 33241478 Pathogen - hypothetical protein CpB0143 1 None None None 33241596 Pathogen - hypothetical protein CpB0261 2 None None None 33241832 Pathogen - hypothetical protein CpB0499 2 None None None 33242387 Pathogen - hypothetical protein CpB1056 2 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33241770 Common mraW S-adenosyl-methyltransferase MraW CpB0437 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 33241373 Pathogen - hypothetical protein CpB0038 1 None None None 33241603 Common - YdaO CpB0268 161 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 33242005 Pathogen - hypothetical protein CpB0674 2 None None None 33241489 Common leuS leucyl-tRNA synthetase CpB0154 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241740 Common - hemolysin CpB0407 199 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 33241439 Common - hypothetical protein CpB0104 7 None None None 33241663 Common rbfA ribosome-binding factor A CpB0328 132 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 33241641 Common fabD acyl-carrier-protein S-malonyltransferase CpB0306 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 33241991 Common rpsH 30S ribosomal protein S8 CpB0660 216 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 33241678 Pathogen - hypothetical protein CpB0343 2 None None None 33241684 Common - putative metalloproteinase CpB0350 209 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 33241785 Common - putative lipoate protein ligase CpB0452 22 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 33242149 Common sdhB succinate dehydrogenase iron-sulfur subunit CpB0818 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 33241900 Common - sulfite reductase [NADPH] flavoprotein alpha-component CpB0569 97 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 33242063 Pathogen - hypothetical protein CpB0732 2 None None None 33242053 Pathogen - major outer membrane protein CpB0722 2 None None None 33241742 Common - hypothetical protein CpB0409 138 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 33242206 Common clpX ATP-dependent protease ATP-binding subunit CpB0875 225 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 33241803 Common - outer membrane protein 14 CpB0470 15 None None None 33241841 Common - hypothetical protein CpB0510 17 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 33241776 Common nrqB Na(+)-translocating NADH-quinone reductase subunit B CpB0443 75 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 33241818 Common - outer membrane protein 5 CpB0485 6 None None None 33242129 Pathogen - hypothetical protein CpB0798 3 None None None 33242308 Common dnaG DNA primase CpB0977 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 33241907 Pathogen - hypothetical protein CpB0576 1 None None None 33241783 Pathogen - hypothetical protein CpB0450 3 None None None 33242304 Common - N5-(1-carboxyethyl)-L-ornithine synthase CpB0973 9 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 33241846 Common - L,L-diaminopimelate aminotransferase CpB0515 234 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 33242118 Common - dihydrofolate reductase CpB0787 132 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 33241590 Common - ABC transporter ATPase CpB0255 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 33241553 Pathogen - transport protein USO1 CpB0218 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33241682 Common - DNA polymerase III subunit beta CpB0347 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 33241886 Common - general stress protein 160 CpB0555 138 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 33241865 Common - hypothetical protein CpB0534 81 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 33241636 Pathogen - inclusion membrane protein C CpB0301 1 None None None 33242257 Common - elongation factor P CpB0926 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 33242403 Common - hypothetical protein CpB1072 4 COG1945 COG1945, Uncharacterized conserved protein Function unknown 33242396 Pathogen - late stage protein CpB1065 2 None None None 33242277 Pathogen - hypothetical protein CpB0946 2 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 33241566 Common - hypothetical protein CpB0231 2 None None None 33242270 Common cutA1 divalent cation tolerance protein CpB0939 112 COG1324 CutA, Uncharacterized protein involved in tolerance to divalent cations Inorganic ion transport and metabolism 33241613 Common - esterase CpB0279 12 COG0400 COG0400, Predicted esterase General function prediction only 33241949 Common pheT phenylalanyl-tRNA synthetase subunit beta CpB0618 233 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 33241532 Common - O-sialoglycoprotein endopeptidase CpB0197 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 33242361 Common rplT 50S ribosomal protein L20 CpB1030 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 33241711 Pathogen - hypothetical protein CpB0378 1 None None None 33241574 Pathogen - hypothetical protein CpB0239 1 None None None 33241526 Common - hypothetical protein CpB0191 14 COG1295 Rbn, Predicted membrane protein Function unknown 33242421 Common - aspartate kinase CpB1090 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 33241673 Common - hypothetical protein CpB0338 152 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 33241546 Common - 2-oxoglutarate/malate translocator precursor CpB0211 111 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 33242194 Pathogen - hypothetical protein CpB0863 2 None None None 33241926 Common - hypothetical protein CpB0595 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 33242051 Common - UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase CpB0720 150 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 33241756 Pathogen - hypothetical protein CpB0423 1 None None None 33241474 Common - glutamate-1-semialdehyde aminotransferase CpB0139 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 33241871 Common dapF diaminopimelate epimerase CpB0540 199 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 33241798 Common - hypothetical protein CpB0465 41 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 33241513 Pathogen - hypothetical protein CpB0178 1 None None None 33242447 Pathogen - putative outer membrane protein CpB1117 2 None None None 33242372 Pathogen - hypothetical protein CpB1041 2 None None None 33242414 Common - 8-amino-7-oxononanoate synthase CpB1083 190 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 33242181 Pathogen - hypothetical protein CpB0850 2 None None None 33242016 Common - thioredoxin CpB0685 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 33242043 Common spoOJ Soj antagonist CpB0711 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 33242233 Common ribH riboflavin synthase subunit beta CpB0902 221 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 33242065 Common yopN type III secretion system ATPase CpB0734 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 33241667 Common - type III secretion system protein CpB0332 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 33241348 Pathogen - HB6 protein CpB0013 1 None None None 33241811 Pathogen - hypothetical protein CpB0478 1 None None None 33242437 Pathogen - hypothetical protein CpB1107 1 None None None 33241695 Pathogen - hypothetical protein CpB0362 1 None None None 33242356 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase CpB1024 192 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 33242164 Pathogen - plasmid virulence protein pGP6-D CpB0833 3 None None None 33241498 Pathogen - hypothetical protein CpB0163 1 None None None 33242124 Pathogen - transcriptional activator Trip230 protein CpB0793 2 None None None 33242108 Common - UDP-N-acetylglucosamine pyrophosphorylase CpB0777 172 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 33242153 Pathogen - hypothetical protein CpB0822 1 None None None 33241365 Pathogen - hypothetical protein CpB0030 1 None None None 33242435 Common xseA exodeoxyribonuclease VII large subunit CpB1105 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 33242234 Pathogen - hypothetical protein CpB0903 2 None None None 33242188 Common - secretion protein CpB0857 51 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 33241504 Pathogen - hypothetical protein CpB0169 1 None None None 33241939 Common atoS AtoS CpB0608 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 33241396 Common fruA PTS fructose-specific enzyme IIBC component CpB0061 107 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 33241483 Pathogen - hypothetical protein CpB0148 1 None None None 33241659 Pathogen - hypothetical protein CpB0324 1 None None None 33241466 Pathogen - hypothetical protein CpB0131 2 None None None 33242035 Pathogen - YwbM CpB0704 1 None None None 33241462 Pathogen - hypothetical protein CpB0127 1 None None None 33242026 Pathogen - hypothetical protein CpB0695 3 None None None 33242229 Pathogen - hypothetical protein CpB0898 2 None None None 33242000 Common rpsS 30S ribosomal protein S19 CpB0669 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 33241416 Common rpoB DNA-directed RNA polymerase subunit beta CpB0081 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 33241390 Common rnc ribonuclease III CpB0055 216 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 33241701 Common - GTP-binding protein LepA CpB0368 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 33242292 Pathogen - hypothetical protein CpB0961 2 None None None 33241386 Pathogen - hypothetical protein CpB0051 1 None None None 33241428 Pathogen - hypothetical protein CpB0093 3 None None None 33242038 Common - phosphate permease CpB0707 172 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 33242120 Common - coenzyme pyrrolo-quinoline-quinone biosynthesis protein CpB0789 34 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 33241972 Common dnaB replicative DNA helicase CpB0641 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 33242242 Pathogen - hypothetical protein CpB0911 1 None None None 33241458 Common - methionyl-tRNA synthetase CpB0123 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33242179 Pathogen - hypothetical protein CpB0848 2 None None None 33242007 Common - UDP-N-acetylglucosamine acyltransferase CpB0676 180 COG1043 LpxA, Acyl- acyl carrier protein 33241921 Common cmk cytidylate kinase CpB0590 207 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 33241369 Pathogen - putative o-sialoglycoprotein endopeptidase CpB0034 2 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 33242262 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase CpB0931 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 33242221 Common - NifU-like protein CpB0890 24 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 33242394 Common xerD site-specific tyrosine recombinase XerD CpB1063 227 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 33241543 Pathogen - hypothetical protein CpB0208 1 None None None 33241565 Pathogen - hypothetical protein CpB0230 1 None None None 33241600 Pathogen - hypothetical protein CpB0265 2 None None None 33242284 Common - 2-acylglycerophosphoethanolamine acyl transferase/acyl carrier CpB0953 27 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 33241839 Common - histidine triad homology CpB0508 221 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 33241379 Common - DNA polymerase III subunits gamma and tau CpB0044 246 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 33241959 Common - glutamine-binding periplasmic protein precursor CpB0628 73 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 33242010 Common lnt apolipoprotein N-acyltransferase CpB0679 152 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 33241996 Pathogen rpmC 50S ribosomal protein L29 CpB0665 2 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 33242273 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase CpB0943 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 33241969 Common - plastidic ATP/ADP-transporter CpB0638 9 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 33242427 Pathogen - Hb4 CpB1097 1 None None None 33242017 Common - putative rRNA methylase CpB0686 180 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 33241816 Pathogen - hypothetical protein CpB0483 1 None None None 33242350 Common - hypothetical protein CpB1019 110 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 33242127 Common nifR3 nitrogen regulating protein CpB0797 212 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 33242055 Common tsf elongation factor Ts CpB0724 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 33242249 Pathogen - putative chltr phosphoprotein CpB0919 2 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 33241805 Pathogen - hypothetical protein CpB0472 1 None None None 33242268 Common - UDP-N-acetylmuramate--alanine ligase CpB0937 220 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 33242315 Common glgA glycogen synthase CpB0983 124 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 33241749 Common sfhB pseudouridine synthetase CpB0416 178 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 33241747 Common - beta-lactamase regulatory protein homolog CpB0414 78 COG1694 MazG, Predicted pyrophosphatase General function prediction only 33241406 Common - hypothetical protein CpB0071 15 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 33241911 Pathogen - 9K cysteine-rich outer membrane protein CpB0580 2 None None None 33241894 Common - ABC transporter ATPase CpB0563 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 33241708 Pathogen - hypothetical protein CpB0375 1 None None None 33241442 Pathogen - hypothetical protein CpB0107 2 COG2110 COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 General function prediction only 33242385 Common - hypothetical protein CpB1054 7 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 33242332 Pathogen - hypothetical protein CpB1001 1 None None None 33241487 Common - pentachlorophenol 4-monooxygenase CpB0152 4 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 33242412 Common - adenosylmethionine--8-amino-7-oxononanoate transaminase CpB1081 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 33241375 Pathogen - hypothetical protein CpB0040 3 None None None 33241774 Common - hypothetical protein CpB0442 44 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 33242172 Common mutL DNA mismatch repair protein CpB0841 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 33242045 Pathogen - hypothetical protein CpB0714 2 None None None 33241686 Common - putative integral membrane protein CpB0353 129 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 33241499 Pathogen - lamin 2-like protein CpB0164 1 None None None 33241834 Pathogen - hypothetical protein CpB0503 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 33242410 Common - 3-phosphoshikimate 1-carboxyvinyltransferase CpB1079 227 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 33241528 Pathogen - myosin heavy chain, skeletal muscle CpB0193 1 None None None 33241534 Common - oligopeptide ABC transport system substrate-binding protein oppA precursor CpB0199 172 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 33241496 Common - diphosphate--fructose-6-phosphate 1-phosphotransferase CpB0161 131 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 33241780 Pathogen - hypothetical protein CpB0447 1 None None None 33242358 Pathogen - hypothetical protein CpB1027 1 None None None 33241619 Pathogen - hypothetical protein CpB0284 1 None None None 33242077 Pathogen - hypothetical protein CpB0746 2 None None None 33242334 Common - poly(A) polymerase CpB1003 212 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 33242095 Common - putative efflux protein CpB0764 73 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 33241728 Common - hypothetical protein CpB0395 3 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 33241511 Pathogen - hypothetical protein CpB0176 1 None None None 33241767 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CpB0434 213 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 33242244 Common yajC preprotein translocase subunit YajC CpB0913 56 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 33241576 Common - 3-deoxy-manno-octulosonate cytidylyltransferase CpB0241 143 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 33241873 Common glyA serine hydroxymethyltransferase CpB0542 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 33241820 Pathogen - outer membrane protein 11 CpB0487 2 None None None 33242423 Pathogen - hypothetical protein CpB1092 1 None None None 33241643 Common recR recombination protein RecR CpB0308 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 33242200 Common - hypothetical protein CpB0869 4 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 33241760 Common - hypothetical protein CpB0427 35 COG2107 COG2107, Predicted periplasmic solute-binding protein General function prediction only 33241983 Common - DNA-directed RNA polymerase subunit alpha CpB0652 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 33242365 Pathogen - hypothetical protein CpB1034 3 COG0795 COG0795, Predicted permeases General function prediction only 33241675 Pathogen - hypothetical protein CpB0340 2 None None None 33242363 Pathogen - hypothetical protein CpB1033 2 None None None 33241586 Common adk adenylate kinase CpB0251 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 33242231 Common - riboflavin-specific deaminase CpB0900 230 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 33242338 Common - putative transport permease CpB1007 98 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 33242116 Common - dihydroneopterin-triphosphate epimerase CpB0785 6 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 33241892 Common - outer membrane protein omp5 CpB0561 31 None None None 33241558 Common - queuine tRNA-ribosyltransferase CpB0223 229 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 33242219 Pathogen - hypothetical protein CpB0888 2 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 33241962 Common - glucose-1-phosphate adenylyltransferase CpB0631 161 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 33241905 Pathogen - hypothetical protein CpB0575 1 None None None 33241551 Pathogen - hypothetical protein CpB0216 1 None None None 33242275 Common - hypothetical protein CpB0944 10 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33242444 Common - putative hth transcription regulator CpB1114 41 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 33241789 Pathogen - hypothetical protein CpB0456 1 None None None 33242106 Pathogen - hypothetical protein CpB0775 3 None None None 33241793 Common - Omp11 CpB0460 132 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 33242088 Pathogen - hypothetical protein CpB0757 3 None None None 33241380 Pathogen - HB2 protein CpB0045 1 None None None 33241350 Common - outer membrane protein 7 CpB0015 8 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 33242255 Common - transketolase CpB0924 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 161484688 Common gmk guanylate kinase CpB0121 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 33241585 Pathogen - hypothetical protein CpB0250 1 None None None 33242306 Common mutS DNA mismatch repair protein CpB0975 203 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 33241389 Common - DNA repair protein RadA CpB0054 202 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 33241634 Pathogen - hypothetical protein CpB0298 1 None None None 33242401 Pathogen - hypothetical protein CpB1070 1 None None None 33242301 Common rpmJ 50S ribosomal protein L36 CpB0970 4 None None None 33242122 Common - 5-formyltetrahydrofolate cyclo-ligase CpB0791 134 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 33241669 Pathogen copN CopN CpB0334 2 None None None 33241888 Common - alanine/glycine transporter protein CpB0557 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 33242408 Common - chorismate synthase CpB1077 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 33241848 Common - hypothetical protein CpB0517 86 COG1872 COG1872, Uncharacterized conserved protein Function unknown 33241398 Common mst101 sperm tail-specific-like protein CpB0063 3 None None None 33241937 Pathogen - hypothetical protein CpB0606 2 None None None 33242137 Common - 2-cys peroxiredoxin BAS1 precursor CpB0806 230 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 33241338 Pathogen gatC aspartyl/glutamyl-tRNA amidotransferase subunit C CpB0003 2 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 33241367 Pathogen - hypothetical protein CpB0032 1 None None None 33241881 Common lpxK tetraacyldisaccharide 4'-kinase CpB0550 130 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 33241502 Pathogen - hypothetical protein CpB0167 1 None None None 33242344 Pathogen - hypothetical protein CpB1013 1 None None None 33242070 Common - Forkhead domain protein CpB0739 17 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 33241476 Common - hypothetical protein CpB0141 53 COG1259 COG1259, Uncharacterized conserved protein Function unknown 33241472 Common - oligoendopeptidase F CpB0137 86 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 33241830 Common - GTP binding protein hflX CpB0497 218 COG2262 HflX, GTPases General function prediction only 33242430 Pathogen - hypothetical protein CpB1100 3 None None None 33241754 Common - putative had hydrolase/phosphatase CpB0420 13 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 33242041 Common dppF dipeptide transport protein CpB0710 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 33241437 Common - cytochrome oxidase chain I CpB0102 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 33242376 Pathogen - hypothetical protein CpB1045 3 None None None 33241352 Pathogen - to outer membrane protein 5 CpB0017 2 None None None 33242445 Pathogen - hypothetical protein CpB1115 1 None None None 33241753 Common - enoyl-(acyl carrier protein) reductase CpB0421 195 COG0623 FabI, Enoyl- acyl-carrier-protein 33241733 Common - glycogen hydrolase (debranching) CpB0401 169 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 33241693 Pathogen - hypothetical protein CpB0360 1 None None None 33241518 Pathogen - hypothetical protein CpB0183 1 None None None 33242374 Pathogen - hypothetical protein CpB1043 2 None None None 33241624 Common - fructose-bisphosphate aldolase CpB0289 63 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 33241548 Pathogen - hypothetical protein CpB0213 1 None None None 33241605 Common - hypothetical protein CpB0270 76 COG1284 COG1284, Uncharacterized conserved protein Function unknown 33241995 Common rpsQ 30S ribosomal protein S17 CpB0664 225 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 33241571 Pathogen - hypothetical protein CpB0236 2 None None None 33241488 Common - hypothetical protein CpB0153 24 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 33241947 Common hlyA alpha-hemolysin CpB0617 183 COG0759 COG0759, Uncharacterized conserved protein Function unknown 33241807 Pathogen - hypothetical protein CpB0474 1 None None None 33241913 Common gltX glutamyl-tRNA synthetase CpB0582 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 33241650 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 CpB0315 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 33241637 Common - amino acid transporter CpB0302 10 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 33241835 Common - 3-deoxy-7-phosphoheptulonate synthase CpB0504 186 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 161484689 Pathogen - V-type ATP synthase subunit D CpB0090 8 COG1394 NtpD, Archaeal/vacuolar-type H+-ATPase subunit D Energy production and conversion 33241781 Pathogen - hypothetical protein CpB0448 1 None None None 33242418 Common - dihydrodipicolinate reductase CpB1088 211 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 33242198 Common trmE tRNA modification GTPase TrmE CpB0867 227 COG0486 ThdF, Predicted GTPase General function prediction only 33242383 Common - sulfate transporter CpB1052 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 33241449 Common prfA peptide chain release factor 1 CpB0114 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 33241953 Common dppB dipeptide transport system permease protein CpB0622 218 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 33242057 Common frr ribosome recycling factor CpB0726 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 33241718 Common aarC 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CpB0385 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 33242230 Common - seryl-tRNA synthetase CpB0899 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241723 Common kgd alpha-ketoglutarate decarboxylase CpB0390 151 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 33242060 Common - outer membrane secretion protein Q CpB0729 134 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 33241891 Common - Omp11 CpB0560 6 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33241746 Pathogen - hypothetical protein CpB0413 3 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 33241388 Common - porphobilinogen deaminase CpB0053 205 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 33242313 Pathogen - hypothetical protein CpB0982 1 None None None 33242310 Pathogen - hypothetical protein CpB0979 1 None None None 33242250 Common - protoporphyrinogen oxidase CpB0918 36 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 33241706 Common - type III secretion system protein CpB0373 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 33242227 Common - stage V sporulation protein E CpB0896 205 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 33241968 Common - proteinase IV CpB0637 188 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33241985 Common rpsM 30S ribosomal protein S13 CpB0654 242 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 33241400 Pathogen - hypothetical protein CpB0065 1 None None None 33242239 Common - putative metal dependent hydrolase CpB0908 60 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 33241440 Pathogen - hypothetical protein CpB0105 3 None None None 33241514 Pathogen - hypothetical protein CpB0179 2 None None None 33242210 Common - rod shape-determining protein CpB0879 233 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 33241393 Common - manganese superoxide dismutase precursor CpB0058 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 33242354 Common trmB tRNA (guanine-N(7))-methyltransferase CpB1023 169 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 33241957 Common - hypothetical protein CpB0626 4 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 33241878 Common kpsF KpsF CpB0547 154 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 33241434 Pathogen - hypothetical protein CpB0099 1 None None None 33241591 Common - hypothetical protein CpB0256 96 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 33242047 Common - putative NifS-related protein CpB0716 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 33241563 Pathogen - hypothetical protein CpB0228 1 None None None 33242134 Common - putative deoxyribonucleotide triphosphate pyrophosphatase CpB0802 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 33241383 Pathogen - hypothetical protein CpB0048 1 None None None 33241768 Common - penicillin-binding protein 2 CpB0435 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 33241786 Common clpC class III stress response-related ATPase CpB0454 221 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 33241455 Common rnhB ribonuclease HII CpB0120 222 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 33241822 Common - outer membrane protein 11 CpB0489 3 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33241503 Pathogen - ribosomal protein YmL31 precursor CpB0168 1 None None None 33242012 Common - DNA polymerase III subunit epsilon CpB0681 193 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 33242429 Common - hypothetical protein CpB1099 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 33242138 Pathogen - hypothetical protein CpB0807 3 None None None 33242388 Pathogen - hypothetical protein CpB1057 2 None None None 33242019 Common aspS aspartyl-tRNA synthetase CpB0688 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33242203 Pathogen - hypothetical protein CpB0871 2 None None None 33241415 Common rplL 50S ribosomal protein L7/L12 CpB0080 213 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 33242175 Common - general secretion pathway protein D precursor CpB0844 135 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 33241429 Common valS valyl-tRNA synthetase CpB0094 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33242002 Common rplW 50S ribosomal protein L23 CpB0671 71 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 33241420 Pathogen - hypothetical protein CpB0085 3 None None None 33241640 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase CpB0305 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33241464 Common - putative cationic amino acid transporter CpB0129 34 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 33241862 Common - hemolysin C CpB0531 215 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 33241653 Common dnaA chromosomal replication initiation protein CpB0317 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 161484682 Common - methionine aminopeptidase CpB1046 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 33242298 Common - putative disulfide bond isomerase CpB0968 5 COG2143 COG2143, Thioredoxin-related protein Posttranslational modification, protein turnover, chaperones 33241761 Pathogen - hypothetical protein CpB0429 2 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 33241974 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA CpB0643 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 33242024 Pathogen - putative OMP CpB0693 3 None None None 33242266 Common - stage V sporulation protein E CpB0935 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 33241738 Pathogen - hypothetical protein CpB0405 3 None None None 33241922 Common - glycerol-3-phosphate acyltransferase CpB0591 123 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 33241556 Common - hypothetical protein CpB0221 26 COG1738 COG1738, Uncharacterized conserved protein Function unknown 33241794 Pathogen - hypothetical protein CpB0461 1 None None None 33241486 Pathogen - hypothetical protein CpB0151 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33242121 Common recA recombinase A CpB0790 214 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 33241730 Common - leucyl aminopeptidase CpB0397 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 33241876 Pathogen - hypothetical protein CpB0545 1 None None None 33242160 Common eno phosphopyruvate hydratase CpB0829 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 33242287 Common priA primosome assembly protein PriA CpB0955 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 33242391 Common - chaperone SycD CpB1060 11 None None None 33242184 Common - translocation protein S CpB0853 119 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 33242264 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase CpB0933 208 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 33241622 Common - ABC transporter CpB0287 103 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 33241354 Common - outer membrane protein 5 CpB0019 64 None None None 33241516 Pathogen - hypothetical protein CpB0181 1 None None None 33241860 Pathogen - hypothetical protein CpB0529 3 None None None 33242431 Common ksgA dimethyladenosine transferase CpB1101 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 33242346 Pathogen - hypothetical protein CpB1015 1 None None None 33242442 Common - ribonuclease HIII CpB1112 34 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 33242352 Common - ribonucleotide-diphosphate reductase subunit alpha CpB1021 227 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 33241345 Pathogen - HB3 protein CpB0010 1 None None None 33241494 Pathogen - KDO-transferase CpB0159 1 None None None 33241361 Common maf Maf-like protein CpB0026 190 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 33241934 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CpB0603 196 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 33242154 Common - hypothetical protein CpB0823 7 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 33241479 Common - hypothetical protein CpB0144 51 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 33242167 Common - hypothetical protein CpB0836 66 COG2510 COG2510, Predicted membrane protein Function unknown 33242144 Common exbB ExbB CpB0813 144 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 33241470 Common groEL chaperonin GroEL CpB0135 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 33242073 Pathogen - hypothetical protein CpB0742 1 None None None 33241857 Common - N-methylpurine-DNA glycosylase CpB0526 82 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 33241699 Pathogen - hypothetical protein CpB0366 1 None None None 33241594 Pathogen - hypothetical protein CpB0259 2 None None None 33241840 Common - putative metal dependent hydrolase CpB0509 16 COG4286 COG4286, Uncharacterized conserved protein related to MYG1 family Function unknown 33242260 Common - chaperonin HSP60 CpB0929 217 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 33242336 Common - D-fructose-6-phosphate amidotransferase CpB1005 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 33241827 Common - glycogen branching enzyme CpB0494 149 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 33242348 Common - hypothetical protein CpB1017 148 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 33241544 Pathogen - hypothetical protein CpB0209 1 None None None 33242323 Pathogen - putative kinase CpB0992 3 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 33242300 Pathogen rpmH 50S ribosomal protein L34 CpB0969 2 None None None 33242367 Common ftsH FtsH CpB1036 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 33241460 Pathogen - HB1 protein CpB0125 1 None None None 33241368 Pathogen - hypothetical protein CpB0033 1 None None None 33242086 Pathogen - hypothetical protein CpB0755 2 None None None 33241692 Common - ATP/ADP-transporter CpB0359 18 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 33241731 Common - single-strand DNA-binding protein CpB0398 39 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 33241618 Pathogen - hypothetical protein CpB0283 3 None None None 33241578 Common - Holliday junction resolvase-like protein CpB0243 114 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 33241628 Pathogen - hypothetical protein CpB0293 1 None None None 33242193 Common - dihydrolipoamide dehydrogenase CpB0862 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 33242093 Common yceA hypothetical protein CpB0762 113 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 33242084 Pathogen - hypothetical protein CpB0753 3 None None None 33241898 Common rplU 50S ribosomal protein L21 CpB0567 154 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 33242091 Common - endonuclease IV CpB0760 99 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 33241583 Pathogen - hypothetical protein CpB0248 1 None None None 33241773 Common dnaA chromosomal replication initiation protein CpB0440 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 33242253 Common - transcription-repair coupling factor CpB0922 220 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 33242285 Common - long chain fatty acid--[acyl-carrier-protein] ligase CpB0954 218 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33242104 Pathogen - hypothetical protein CpB0773 1 None None None 33241632 Common - amino acid (glutamate) transporter CpB0297 158 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 33241853 Common grpE GrpE CpB0522 223 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 33241629 Common mgtE MgtE CpB0294 171 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 33241639 Common acpP acyl carrier protein CpB0304 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33241883 Common - putative SAM dependent methyltransferase CpB0552 104 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 161484687 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CpB0568 168 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 33241522 Common - elongation factor P CpB0187 213 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 33241577 Common - CTP synthetase CpB0242 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 33241538 Common oppC oligopeptide ABC transporter (permease) CpB0203 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 33241611 Common - membrane dipeptidase precursor CpB0276 76 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 33242274 Common - hypothetical protein CpB0942 83 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 33241833 Common - arginine-binding periplasmic protein 2 precursor CpB0502 160 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 33241536 Common - dipeptide ABC transporter CpB0201 192 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 33241762 Common hetA HetA CpB0428 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 33241802 Pathogen - outer membrane protein 13 CpB0469 2 None None None 33241645 Common - OmpH-like outer membrane protein CpB0310 5 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 33242327 Common - cytosolic axial filament protein cafA and ribonuclease E CpB0996 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 33242147 Common - succinate dehydrogenase subunit C CpB0816 13 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 33241951 Common - methylated-DNA-protein-cysteine S-methyltransferase CpB0620 79 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 33241721 Pathogen - hypothetical protein CpB0388 1 None None None 33241681 Common smpB SsrA-binding protein CpB0345 215 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 33241660 Common rpsA 30S ribosomal protein S1 CpB0325 216 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 33241744 Pathogen - hypothetical protein CpB0411 1 None None None 33242059 Common - ATP:guanido phosphotransferase CpB0728 23 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 33241450 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase CpB0115 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 33241814 Pathogen - hypothetical protein CpB0481 1 None None None 33241424 Common - V-type ATP synthase subunit B CpB0089 247 COG1156 NtpB, Archaeal/vacuolar-type H+-ATPase subunit B Energy production and conversion 33241573 Common - pfs protein CpB0238 23 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 33241837 Common - prolin permease protein CpB0506 55 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 33241915 Pathogen - hypothetical protein CpB0584 2 None None None 33241993 Common rplX 50S ribosomal protein L24 CpB0662 189 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 33241356 Pathogen - hypothetical protein CpB0021 1 None None None 33242111 Common recD exonuclease V alpha-subunit CpB0780 127 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 33241652 Pathogen - hypothetical protein CpB0318 1 None None None 33241601 Pathogen - pEARLI 4 CpB0266 1 None None None 33242381 Common - ABC transporter CpB1050 179 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 33242029 Common dacB serine-type D-Ala-D-Ala carboxypeptidase CpB0698 143 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 33241864 Common - hypothetical protein CpB0533 8 None None None 33241447 Pathogen - hypothetical protein CpB0112 3 None None None 33241480 Common - ClpB CpB0145 216 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 33242177 Common - XcpS CpB0846 141 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 33241413 Common rplA 50S ribosomal protein L1 CpB0078 248 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 33241506 Pathogen - hypothetical protein CpB0171 1 None None None 33241445 Common ileS isoleucyl-tRNA synthetase CpB0110 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241598 Pathogen - hypothetical protein CpB0263 2 None None None 33241751 Pathogen - hypothetical protein CpB0418 1 None None None 33241917 Common - bifunctional preprotein translocase subunit SecD/SecF CpB0586 209 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 33242022 Common uhpC hexose phosphate transport system regulatory protein CpB0691 156 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 33241422 Pathogen - hypothetical protein CpB0087 3 None None None 33242034 Pathogen - hypothetical protein CpB0703 2 None None None 33242140 Common - peptidoglycan-associated lipoprotein precursor CpB0809 146 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 33241655 Common - prolipoprotein diacylglyceryl transferase CpB0320 166 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 33242296 Common lysS lysyl-tRNA synthetase CpB0965 235 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 33241342 Pathogen - hypothetical protein CpB0007 1 None None None 33242331 Common - outer membrane protein 11 CpB1000 34 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33242031 Pathogen - hypothetical protein CpB0700 1 None None None 33241945 Pathogen - hypothetical protein CpB0614 2 None None None 33241736 Pathogen - hypothetical protein CpB0403 1 None None None 33241402 Pathogen - hypothetical protein CpB0067 2 None None None 33242212 Pathogen - hypothetical protein CpB0881 2 None None None 33241666 Common - translation-associated GTPase CpB0330 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 33242246 Pathogen - hypothetical protein CpB0915 1 None None None 33241829 Common - hypothetical protein CpB0496 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 33241709 Pathogen - hypothetical protein CpB0376 1 None None None 33241454 Common rplS 50S ribosomal protein L19 CpB0119 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 33242448 Pathogen - putative outer membrane protein CpB1118 2 None None None 33242156 Common - hypothetical protein CpB0825 15 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 33241432 Common - pyruvate kinase CpB0097 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 33242225 Pathogen - hypothetical protein CpB0895 2 None None None 33241978 Common ruvC Holliday junction resolvase CpB0647 197 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 33241955 Pathogen - hypothetical protein CpB0624 1 None None None 33241819 Pathogen - outer membrane protein 10 CpB0486 1 None None None 33242272 Common - sigma-F 5-region regulatory protein spoIIAA CpB0941 49 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 33242075 Common - DNA topoisomerase IV subunit A CpB0744 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 33242251 Common - coproporphyrinogen III oxidase CpB0920 203 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 33242416 Common - hypothetical protein CpB1085 75 COG1738 COG1738, Uncharacterized conserved protein Function unknown 33242269 Common - hypothetical protein CpB0938 52 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 33241932 Common - hypothetical protein CpB0601 16 COG5531 COG5531, SWIB-domain-containing proteins implicated in chromatin remodeling Chromatin structure and dynamics 33241690 Pathogen - hypothetical protein CpB0357 1 None None None 33241343 Common - HB1 protein CpB0008 10 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33242169 Pathogen - hypothetical protein CpB0838 2 COG5665 NOT5, CCR4-NOT transcriptional regulation complex, NOT5 subunit Transcription 33241697 Pathogen - hypothetical protein CpB0364 1 None None None 33242163 Pathogen - hypothetical protein CpB0832 2 None None None 33241842 Common - hypothetical protein CpB0511 6 None None None 33241363 Common xerC site-specific tyrosine recombinase XerC CpB0028 229 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 33241662 Common infB translation initiation factor IF-2 CpB0327 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 33242325 Common - similar to protein-degrading enzyme CpB0994 153 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 33241671 Common - 4-alpha-glucanotransferase CpB0336 120 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 33242371 Common - hypothetical protein CpB1040 4 None None None 33241924 Common - UDP-N-acetylglucosamine 1-carboxyvinyltransferase CpB0592 210 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 33241688 Common - ABC transporter CpB0355 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 33241394 Common - acetyl-CoA carboxylase subunit beta CpB0059 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 33242196 Common brnQ branched-chain amino acid transporter CpB0865 49 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 33241554 Common - mammalian coiled coil synaptonemal complex protein CpB0219 4 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33242182 Pathogen - hypothetical protein CpB0851 2 None None None 33241758 Pathogen - hypothetical protein CpB0425 3 COG5465 COG5465, Uncharacterized conserved protein Function unknown 33242433 Pathogen - hypothetical protein CpB1103 2 None None None 33241492 Pathogen - kdtA KDO-transferase CpB0157 1 None None None 33241771 Pathogen - hypothetical protein CpB0438 2 None None None 33242049 Common - ABC transporter ATPase CpB0718 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 33241903 Common - 30S ribosomal protein S7 CpB0572 234 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 33241524 Common - inclusion membrane protein A CpB0189 56 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33241615 Common tdk thymidylate kinase CpB0280 223 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 33242132 Common - uracil-DNA glycosylase CpB0801 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 33241408 Common infA translation initiation factor IF-1 CpB0073 213 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 33241790 Pathogen - hypothetical protein CpB0457 3 None None None 33241966 Common coaE dephospho-CoA kinase CpB0635 201 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 33241896 Common obgE GTPase ObgE CpB0564 249 COG0536 Obg, Predicted GTPase General function prediction only 161484685 Common hemH ferrochelatase CpB0627 165 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 33242248 Pathogen - hypothetical protein CpB0917 1 None None None 33241943 Pathogen - hypothetical protein CpB0612 4 None None None 33242341 Common - succinyl-CoA synthetase subunit alpha CpB1010 207 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 33241531 Common - arginine repressor protein CpB0196 80 COG1438 ArgR, Arginine repressor Transcription 33242360 Common rpmI 50S ribosomal protein L35 CpB1029 111 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 33241501 Pathogen - hypothetical protein CpB0166 1 None None None 33241988 Common rpsE 30S ribosomal protein S5 CpB0657 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 33241796 Common - outer membrane protein 11 CpB0463 14 None None None 33241779 Common nqr5 Na(+)-translocating NADH-quinone reductase subunit E CpB0446 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 33241647 Pathogen - hypothetical protein CpB0312 2 None None None 33242204 Common engA GTP-binding protein EngA CpB0873 221 COG1160 COG1160, Predicted GTPases General function prediction only 33242102 Common - Na(+)-translocating NADH-quinone reductase subunit A CpB0771 39 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 33241580 Common - 6-phosphogluconolactonase CpB0245 109 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 33241809 Pathogen - hypothetical protein CpB0476 1 None None None 33242302 Common rpsN 30S ribosomal protein S14 CpB0971 212 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 33241384 Common - hypothetical protein CpB0049 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 33241855 Pathogen - hypothetical protein CpB0524 1 None None None 33241589 Common rplM 50S ribosomal protein L13 CpB0254 227 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 33241560 Pathogen - hypothetical protein CpB0225 1 None None None 33242215 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CpB0884 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 33241867 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase CpB0536 205 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 33242319 Common rpsF 30S ribosomal protein S6 CpB0988 102 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 33242082 Common - ABC transporter CpB0751 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 33241716 Pathogen - hypothetical protein CpB0383 1 None None None 33242398 Common - malate dehydrogenase CpB1067 119 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 33242191 Pathogen - hypothetical protein CpB0860 1 None None None 33241626 Pathogen - hypothetical protein CpB0291 1 None None None 33241851 Common - prolyl-tRNA synthetase CpB0520 236 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33242279 Common - 3-oxoacyl-(acyl carrier protein) synthase II CpB0948 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 33241630 Pathogen - hypothetical protein CpB0295 2 None None None 33241824 Pathogen - hypothetical protein CpB0491 1 None None None 33242067 Pathogen - hypothetical protein CpB0736 3 None None None 33242280 Common - diadenosine tetraphosphatase CpB0949 20 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 33242321 Common rplI 50S ribosomal protein L9 CpB0990 211 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 33241866 Common - hypothetical protein CpB0535 29 COG1427 COG1427, Predicted periplasmic solute-binding protein General function prediction only 33241353 Common - outer membrane protein 5 CpB0018 50 None None None 33241575 Pathogen - hypothetical protein CpB0240 3 None None None 33242089 Common mviN MviN CpB0758 165 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 33242109 Common tctD trans-activating transcription regulator CpB0778 194 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 33242422 Common dapA dihydrodipicolinate synthase CpB1091 224 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 33242278 Common - Iojap CpB0947 199 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 33241587 Common - p60 precursor CpB0252 39 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 33241519 Pathogen - hypothetical protein CpB0184 1 None None None 33242404 Pathogen - hypothetical protein CpB1073 2 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 33242309 Pathogen - hypothetical protein CpB0978 2 None None None 33241614 Common dnaX DNA polymerase III subunit delta' CpB0278 212 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 33241635 Pathogen - inclusion membrane protein B CpB0300 2 None None None 33241869 Pathogen - hypothetical protein CpB0538 1 None None None 33241933 Common yaeI putative phosphoesterase CpB0602 63 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 33241906 Pathogen - hypothetical protein CpB0574 1 None None None 33242050 Common - cysteine desulfurase activator complex subunit SufB CpB0719 185 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 33241843 Pathogen - hypothetical protein CpB0512 1 None None None 33242119 Common - hypothetical protein CpB0788 44 COG1478 COG1478, Uncharacterized conserved protein Function unknown 33241961 Common - putative phosphoesterase CpB0630 15 COG1768 COG1768, Predicted phosphohydrolase General function prediction only 33242305 Common uvrC excinuclease ABC subunit C CpB0974 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 33242258 Pathogen - hypothetical protein CpB0927 2 None None None 33242317 Common - 50S ribosomal protein L25/general stress protein Ctc CpB0986 145 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 33242100 Common greA transcript cleavage factor/unknown domain fusion protein CpB0769 198 COG1747 COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA Function unknown 33241850 Pathogen - hypothetical protein CpB0519 2 None None None 33242197 Common - endonuclease III CpB0866 237 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 33242098 Common - hypothetical protein CpB0766 13 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 33241885 Common - hypothetical protein CpB0554 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 33242243 Common - Na(+)-translocating NADH-quinone reductase subunit F CpB0912 115 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 33241642 Common yjaX 3-oxoacyl-(acyl carrier protein) synthase III CpB0307 209 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 33242415 Common - biotin synthetase CpB1084 182 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 33242369 Common rpsO 30S ribosomal protein S15 CpB1038 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 33241984 Common - 30S ribosomal protein S11 CpB0653 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 33242434 Common xseB exodeoxyribonuclease VII small subunit CpB1104 12 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 33241941 Common atoC acetate metabolism regulatory protein CpB0610 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 33242386 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CpB1055 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 33241948 Pathogen - hypothetical protein CpB0616 2 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 33241910 Common - 60K cysteine-rich outer membrane protein precursor CpB0579 14 None None None 33241533 Common - oligopeptide ABC transport system substrate-binding protein oppA precursor CpB0198 181 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 33241970 Common - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CpB0639 91 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 33241792 Pathogen - hypothetical protein CpB0459 2 COG1287 COG1287, Uncharacterized membrane protein, required for N-linked glycosylation General function prediction only 33241552 Pathogen - hypothetical protein CpB0217 1 None None None 33241340 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B CpB0005 210 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 33242150 Pathogen - hypothetical protein CpB0819 3 None None None 33241757 Pathogen - hypothetical protein CpB0424 3 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 33242189 Pathogen - hypothetical protein CpB0858 1 None None None 33241512 Pathogen - hypothetical protein CpB0177 1 None None None 33242373 Pathogen - hypothetical protein CpB1042 2 None None None 33241734 Pathogen - hypothetical protein CpB0400 3 None None None 33242015 Pathogen - hypothetical protein CpB0684 3 None None None 33242064 Pathogen - hypothetical protein CpB0733 3 None None None 33241477 Common - ribose-5-phosphate isomerase A CpB0142 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 33242357 Common nusB transcription antitermination protein NusB CpB1026 25 COG0781 NusB, Transcription termination factor Transcription 33241547 Common - diphosphate--fructose-6-phosphate 1-phosphotransferase CpB0212 80 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 33241349 Pathogen - HB7 protein CpB0014 1 None None None 33241674 Common - putative phopholipase D CpB0339 50 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 33241497 Common cinI cinnamoyl ester hydrolase CpB0162 40 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 33241927 Common - hypothetical protein CpB0596 10 None None None 33242395 Common pgi glucose-6-phosphate isomerase CpB1064 209 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 33242020 Common hisS histidyl-tRNA synthetase CpB0689 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241490 Common - 3-deoxy-D-manno-octulosonic-acid transferase CpB0155 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 33241473 Common ybgI YbgI CpB0138 104 COG0327 COG0327, Uncharacterized conserved protein Function unknown 33241799 Pathogen - hypothetical protein CpB0466 1 None None None 33241461 Pathogen - HB7 protein CpB0126 1 COG0409 HypD, Hydrogenase maturation factor Posttranslational modification, protein turnover, chaperones 33241874 Pathogen hemD uroporphyrinogen-III synthase CpB0543 3 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 33242125 Pathogen - hypothetical protein CpB0794 2 None None None 33241397 Common ptsN phosphotransferase system enzyme II CpB0062 103 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 33241895 Common - iron transport protein CpB0565 190 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 33241938 Pathogen - hypothetical protein CpB0607 2 None None None 33241714 Pathogen - hypothetical protein CpB0381 2 None None None 33241370 Pathogen rpsU 30S ribosomal protein S21 CpB0035 3 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 33242291 Pathogen - hypothetical protein CpB0960 2 None None None 33241689 Common - periplasmic substrate binding protein TroA CpB0356 132 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 33241668 Common lcrD low calcium response D CpB0333 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 33241702 Common - 6-phosphogluconate dehydrogenase CpB0369 174 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 33241812 Pathogen - hypothetical protein CpB0479 1 None None None 33241540 Common oppF oligopeptide transport protein CpB0205 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 33241963 Common - UMP synthase CpB0632 78 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 33242131 Common - UvrD CpB0800 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 33242042 Pathogen - hypothetical protein CpB0712 1 None None None 33242446 Pathogen - hypothetical protein CpB1116 1 None None None 33242235 Pathogen - hypothetical protein CpB0904 3 None None None 33242159 Common - hypothetical protein CpB0828 12 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 33241981 Common - glyceraldehyde-3-phosphate dehydrogenase CpB0650 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 33241826 Pathogen - hypothetical protein CpB0493 2 None None None 33241931 Pathogen - histone H3 CpB0600 1 None None None 33241696 Pathogen - hypothetical protein CpB0363 1 None None None 33241438 Common - cytochrome oxidase chain II CpB0103 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 33241920 Common - phosphatidate cytidylyltransferase CpB0589 139 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 33241364 Common - ribonuclease Z CpB0029 94 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 33241658 Common - thioredoxin reductase CpB0322 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 33241451 Common ffh signal recognition particle chain CpB0116 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 33242293 Pathogen - hypothetical protein CpB0962 1 None None None 33242013 Pathogen - hypothetical protein CpB0682 1 None None None 33241704 Pathogen - hypothetical protein CpB0371 1 None None None 33241412 Common rplK 50S ribosomal protein L11 CpB0077 241 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 33241391 Pathogen - hypothetical protein CpB0056 2 None None None 33242027 Common - putative sigma regulatory factor-histidine kinase CpB0696 16 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 33241979 Common - hypothetical protein CpB0648 8 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33241929 Common prfB peptide chain release factor 2 CpB0598 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 33241376 Common - phosphotransferase system phosphohistidine-containing protein CpB0041 73 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 33241765 Common - integration host factor beta chain CpB0432 162 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 33241387 Pathogen - hypothetical protein CpB0052 1 None None None 33241410 Pathogen secE preprotein translocase subunit SecE CpB0075 3 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 33242217 Pathogen - hypothetical protein CpB0886 2 None None None 33241664 Common truB tRNA pseudouridine synthase B CpB0329 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 33242036 Pathogen - hypothetical protein CpB0705 1 None None None 33242008 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase CpB0677 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 33242261 Pathogen - hypothetical protein CpB0930 1 None None None 33241950 Common - methylated-DNA-protein-cysteine S-methyltransferase CpB0619 8 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 33241677 Pathogen ltuB LtuB CpB0342 2 None None None 33241358 Pathogen - outer membrane protein 5 CpB0023 2 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33241569 Common - putative disulfide bond chaperone CpB0234 18 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 33242141 Common tolB translocation protein TolB CpB0810 141 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 33241990 Common rplF 50S ribosomal protein L6 CpB0659 232 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 33242267 Common murG N-acetylglucosaminyl transferase CpB0936 207 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 33242054 Common rpsB 30S ribosomal protein S2 CpB0723 236 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 33241973 Pathogen - hypothetical protein CpB0642 1 None None None 33241405 Pathogen - hypothetical protein CpB0070 1 None None None 33241372 Common - 2-oxoisovalerate dehydrogenase alpha and beta subunit CpB0037 194 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 33241672 Common rpmB 50S ribosomal protein L28 CpB0337 79 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 33242426 Pathogen - hypothetical protein CpB1094 1 None None None 33241351 Pathogen - outer membrane protein 5 CpB0016 2 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33241817 Common - outer membrane protein 11 CpB0484 6 None None None 33241743 Pathogen - hypothetical protein CpB0410 1 None None None 33242128 Common - DNA topoisomerase I/SWI domain fusion protein CpB0796 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 33242343 Pathogen - hypothetical protein CpB1012 1 None None None 33242222 Common nifS nitrogen fixation protein CpB0891 167 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 33241908 Common - carboxy-terminal proteinase precursor CpB0577 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 33242314 Common - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase CpB0984 187 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 33241777 Common - Na(+)-translocating NADH-quinone reductase subunit C CpB0444 44 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 33242205 Common - poly(A) polymerase CpB0874 214 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 33241804 Pathogen - outer membrane protein 11 CpB0471 2 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33241782 Common - glycine cleavage system protein H CpB0449 186 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 33241595 Pathogen - hypothetical protein CpB0260 2 None None None 33241336 Pathogen - hypothetical protein CpB0001 2 COG2155 COG2155, Uncharacterized conserved protein Function unknown 33242148 Common sdhA succinate dehydrogenase flavoprotein subunit CpB0817 223 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 33241683 Common - hypothetical protein CpB0351 26 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 33241720 Pathogen - hypothetical protein CpB0387 1 None None None 33241712 Pathogen - hypothetical protein CpB0379 2 None None None 33241584 Pathogen - hypothetical protein CpB0249 1 None None None 33241644 Common - putative omp85 analog CpB0309 150 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 33241880 Common - proton/sodium glutamate symport transporter CpB0549 154 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 33242069 Pathogen - hypothetical protein CpB0738 3 None None None 33241766 Common - N-acetylmuramoyl-L-alanine amidase 50K precursor CpB0433 183 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 33242362 Common pheS phenylalanyl-tRNA synthetase subunit alpha CpB1031 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 33241727 Common - hypothetical protein CpB0394 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 33242364 Pathogen - hypothetical protein CpB1032 3 COG0795 COG0795, Predicted permeases General function prediction only 33242078 Common - ribosomal large subunit pseudouridine synthase A CpB0747 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 33242339 Common - ftsY cell division protein CpB1008 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 33242201 Common secA preprotein translocase subunit SecA CpB0870 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 33242345 Pathogen - hypothetical protein CpB1014 1 None None None 33241520 Common - acetyl-CoA carboxylase biotin carboxylase subunit CpB0185 222 COG0439 AccC, Biotin carboxylase Lipid metabolism 33242046 Pathogen - hypothetical protein CpB0715 2 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 33242117 Common - dihydropteroate synthase CpB0786 220 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 33241893 Common - adhesin B protein CpB0562 155 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 33241535 Common - oligopeptide ABC transport system substrate-binding protein oppA precursor CpB0200 144 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 33241559 Pathogen - hypothetical protein CpB0224 1 None None None 33242328 Pathogen - hypothetical protein CpB0997 3 None None None 33242335 Common - phosphohexosemutase CpB1004 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 33242377 Common - hypothetical protein CpB1047 5 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33242087 Pathogen - hypothetical protein CpB0756 2 None None None 33242443 Pathogen - hypothetical protein CpB1113 1 None None None 33241732 Pathogen - hypothetical protein CpB0399 3 None None None 33241719 Common - hypothetical protein CpB0386 152 COG1496 COG1496, Uncharacterized conserved protein Function unknown 33242096 Common - putative exodeoxyribonuclease V gamma CpB0765 17 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 33242107 Common - geranylgeranyl pyrophosphate synthase CpB0776 238 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 33241517 Pathogen - hypothetical protein CpB0182 1 None None None 33241800 Common - outer membrane protein 5 CpB0467 44 COG5651 COG5651, PPE-repeat proteins Cell motility and secretion 33242402 Common - arginine/ornithine antiporter protein CpB1071 125 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 33242307 Pathogen - hypothetical protein CpB0976 1 None None None 33241633 Common - sodium-dependent amino acid transporter CpB0299 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 33241355 Pathogen - outer membrane protein 5 CpB0020 2 None None None 33242400 Common - putative D-amino acid dehydrogenase CpB1068 30 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 33242232 Common - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein CpB0901 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 33241550 Pathogen - hypothetical protein CpB0215 1 None None None 33241381 Common - HB5 protein CpB0046 3 None None None 33242195 Common - SNF protein CpB0864 136 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 33241815 Pathogen - hypothetical protein CpB0482 1 None None None 33241529 Common - amino acid transport ATP-binding protein CpB0194 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 33242080 Common - 2-dehydro-3-deoxyphosphooctonate aldolase CpB0749 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 33241904 Common rpsL 30S ribosomal protein S12 CpB0573 239 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 33242351 Common - CDP-diacylglycerol-serine O-phosphatidyltransferase CpB1020 142 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 33241788 Pathogen - hypothetical protein CpB0455 1 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 33241691 Pathogen - hypothetical protein CpB0358 3 None None None 33242413 Common - dethiobiotin synthase CpB1082 147 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 33241936 Common - putative phosphoglycolate phosphatase CpB0604 54 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 33242436 Common tpiA triosephosphate isomerase CpB1106 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 33241694 Pathogen - hypothetical protein CpB0361 1 None None None 33241399 Pathogen - hypothetical protein CpB0064 1 None None None 33242136 Common groEL chaperonin GroEL CpB0805 237 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 33241507 Pathogen - hypothetical protein CpB0172 2 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 33241337 Pathogen - hypothetical protein CpB0002 1 None None None 33242438 Pathogen - hypothetical protein CpB1108 1 None None None 33241887 Common lspA lipoprotein signal peptidase CpB0556 178 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 33242123 Common - hypothetical protein CpB0792 18 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 33241859 Pathogen - hypothetical protein CpB0528 1 None None None 33242071 Pathogen - hypothetical protein CpB0740 2 None None None 33242152 Common rsbU RsbU CpB0821 87 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 33241484 Common - protein kinase CpB0149 116 COG1262 COG1262, Uncharacterized conserved protein Function unknown 33241755 Pathogen - hypothetical protein CpB0422 1 None None None 33241623 Common - amino-acid ABC transporter protein CpB0288 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 33241606 Common - aromatic acid decarboxylase CpB0271 153 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 33241685 Common - 1-deoxy-D-xylulose 5-phosphate reductoisomerase CpB0352 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 33242281 Common - inorganic pyrophosphatase CpB0950 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 33242375 Pathogen - hypothetical protein CpB1044 2 None None None 33242187 Pathogen - hypothetical protein CpB0856 3 None None None 33241845 Pathogen - hypothetical protein CpB0514 1 None None None 33241495 Pathogen - hypothetical protein CpB0160 1 None None None 33242142 Pathogen - hypothetical protein CpB0811 2 None None None 33242052 Common - penicillin-binding protein 2 CpB0721 179 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 33241347 Pathogen - HB2/HB5 protein CpB0012 1 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 33241549 Pathogen - hypothetical protein CpB0214 1 None None None 33241475 Common - hypothetical protein CpB0140 129 COG1678 COG1678, Putative transcriptional regulator Transcription 33242359 Common infC translation initiation factor IF-3 CpB1028 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 33241609 Pathogen - hypothetical protein CpB0274 1 None None None 33241676 Pathogen - hypothetical protein CpB0341 2 None None None 33241471 Common groES co-chaperonin GroES CpB0136 213 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 33241366 Common - lon ATP-dependent proteinase CpB0031 220 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 33242025 Pathogen - hypothetical protein CpB0694 3 COG4105 ComL, DNA uptake lipoprotein General function prediction only 33242393 Pathogen - hypothetical protein CpB1062 1 None None None 33242165 Common soj Spo0A activation inhibitor CpB0834 230 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 33241510 Common - guaB gene for inosine 5-monophosphase dehydrogenase subunit CpB0175 219 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 33242220 Common - type III secretion system protein CpB0889 4 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 33242009 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase CpB0678 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 33242037 Common pgk phosphoglycerate kinase CpB0706 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 33242178 Pathogen - general secretion pathway protein g precursor CpB0847 3 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 33242283 Common - bisphosphonucleoside 3(2')-phosphohydrolase-like protein CpB0952 145 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 33242207 Common clpP ATP-dependent Clp protease proteolytic subunit CpB0876 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33241419 Pathogen - putative predied ferredoxin CpB0084 3 None None None 33241417 Common - DNA-directed RNA polymerase subunit beta' CpB0082 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 33241427 Common - V-type ATP synthase subunit K CpB0092 21 None None None 33241481 Common - hypothetical protein CpB0146 5 COG2912 COG2912, Uncharacterized conserved protein Function unknown 33242030 Pathogen - hypothetical protein CpB0699 1 None None None 33241505 Pathogen - hypothetical protein CpB0170 1 None None None 33242389 Pathogen - hypothetical protein CpB1059 1 None None None 33241542 Pathogen - hypothetical protein CpB0207 1 None None None 33242208 Common tig trigger factor CpB0877 195 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 33242228 Common copA copper-transporting ATPase CpB0897 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 33241564 Pathogen - major adhesion protein CpB0229 1 None None None 33241946 Common - hypothetical protein CpB0615 16 COG1723 COG1723, Uncharacterized conserved protein Function unknown 33242105 Common - hypothetical protein CpB0774 14 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 33241339 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A CpB0004 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 33241710 Pathogen - hypothetical protein CpB0377 1 None None None 33241443 Pathogen - hypothetical protein CpB0108 2 None None None 33242241 Pathogen - hypothetical protein CpB0910 1 None None None 33241999 Common rplV 50S ribosomal protein L22 CpB0668 201 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 33241457 Pathogen - hypothetical protein CpB0122 2 None None None 33241919 Common - hypothetical protein CpB0588 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 33242040 Common - dipeptide ABC transporter, ATP-binding protein CpB0709 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 33241608 Pathogen - HB6 protein CpB0273 1 None None None 33241468 Pathogen - hypothetical protein CpB0133 1 None None None 33241436 Common - hypothetical protein CpB0101 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 33241831 Common - putative metal dependent hydrolase CpB0498 89 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 33242384 Common - hypothetical protein CpB1053 37 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 33241527 Pathogen - hypothetical protein CpB0192 3 None None None 33241700 Pathogen - hypothetical protein CpB0367 1 None None None 33241806 Pathogen - hypothetical protein CpB0473 1 None None None 33241775 Pathogen - hypothetical protein CpB0441 2 None None None 33242218 Common - type III secretion system ATPase CpB0887 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 33242312 Common - glycyl-tRNA synthetase CpB0981 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 33242126 Common - hypothetical protein CpB0795 24 COG0762 COG0762, Predicted integral membrane protein Function unknown 33241748 Common - A/G-specific adenine glycosylase CpB0415 233 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 33242276 Pathogen - hypothetical protein CpB0945 1 None None None 33241593 Common - hypothetical protein CpB0258 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 33241649 Common - pyruvate dehydrogenase E1 beta subunit CpB0314 212 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 33241679 Common - methenyltetrahydrofolate cyclohydrolase CpB0344 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 33241725 Common - coproporphyrinogen III oxidase CpB0392 207 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 33241465 Common - biotin--[acetyl-CoA-carboxylase] ligase CpB0130 6 COG4285 COG4285, Uncharacterized conserved protein Function unknown 33242115 Common - RNA polymerase sigma factor RpoD CpB0784 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 33241810 Pathogen - hypothetical protein CpB0477 1 None None None 33242428 Pathogen - pHB5 protein CpB1098 1 None None None 33242424 Pathogen - hypothetical protein CpB1093 1 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 33241975 Common - lipoate--protein ligase A CpB0644 52 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 33242265 Common lytE cell wall hydrolase CpB0934 33 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 33242289 Common - putative thioredoxin disulfide isomerase CpB0958 7 COG2143 COG2143, Thioredoxin-related protein Posttranslational modification, protein turnover, chaperones 33241567 Pathogen - hypothetical protein CpB0232 1 None None None 33242411 Common - hypothetical protein CpB1080 3 None None None 33241741 Common nifS nitrogen fixation protein CpB0408 222 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 33242062 Pathogen fliN type III secretion system protein CpB0731 4 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 33242018 Common - mip protein CpB0687 131 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 33241374 Common - competence locus E-like protein CpB0039 37 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 33242171 Common lcrH LcrH CpB0840 15 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 33242379 Common - hypothetical protein CpB1048 141 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 33242439 Pathogen secG preprotein translocase subunit SecG CpB1109 2 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 33241435 Common - hypothetical protein CpB0100 4 None None None 33241621 Common - gene encoding a 29 kDa immunogenic protein CpB0286 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 33242263 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase CpB0932 220 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 33241875 Pathogen - hypothetical protein CpB0544 1 None None None 33241861 Common - hypothetical protein CpB0530 33 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 33241879 Common - branched-chain alpha-keto acid dehydrogenase subunit E2 CpB0548 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 33241687 Common - putative integral membrane protein CpB0354 145 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 33241607 Common ubiA prenyltransferase CpB0272 118 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 33241889 Pathogen - hypothetical protein CpB0558 2 None None None 33241401 Pathogen - hypothetical protein CpB0066 2 None None None 33242185 Common yscR type III secretion system protein CpB0854 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 33241557 Pathogen - hypothetical protein CpB0222 1 None None None 33242390 Pathogen - hypothetical protein CpB1058 2 None None None 33241493 Pathogen - hypothetical protein CpB0158 1 None None None 33241923 Common argS arginyl-tRNA synthetase CpB0593 248 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33242353 Common - ribonucleotide-diphosphate reductase subunit beta CpB1022 162 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 33241485 Common ligA NAD-dependent DNA ligase LigA CpB0150 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 33241654 Common - putative inner membrane protein translocase component YidC CpB0319 212 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 33241980 Pathogen - hypothetical protein CpB0649 3 None None None 33242145 Common dsbD thiol:disulfide interchange protein CpB0814 118 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 33242001 Common rplB 50S ribosomal protein L2 CpB0670 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 33241858 Common - hypothetical protein CpB0527 83 COG2928 COG2928, Uncharacterized conserved protein Function unknown 33242056 Common pyrH uridylate kinase CpB0725 239 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 33241967 Common - DNA polymerase I CpB0636 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 33242226 Common birA biotin--protein ligase CpB0894 9 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 33241882 Common spoU tRNA methylase CpB0551 191 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 33242347 Common htrA serine protease DO CpB1016 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 33241392 Common - phosphomannomutase CpB0057 230 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 33241737 Common dcd deoxycytidine triphosphate deaminase CpB0404 149 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 33242370 Common - putative cytosine deaminase CpB1039 211 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 33242409 Common - shikimate kinase CpB1078 151 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 33241346 Pathogen - HB2 protein CpB0011 1 None None None 33241670 Pathogen scc1 Scc1 CpB0335 3 None None None 33241870 Pathogen - hypothetical protein CpB0539 3 None None None 33242441 Common def peptide deformylase CpB1111 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 33242085 Pathogen - hypothetical protein CpB0754 2 None None None 33241357 Common - outer membrane protein 11 CpB0022 35 None None None 33242092 Common rpsD 30S ribosomal protein S4 CpB0761 224 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 33242083 Pathogen - hypothetical protein CpB0752 2 None None None 33241847 Common - hypothetical protein CpB0516 17 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 33241530 Common - ABC amino acid transporter permease CpB0195 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 33241582 Pathogen - hypothetical protein CpB0247 1 None None None 33242349 Common - putative zinc metalloproteinase CpB1018 60 COG1026 COG1026, Predicted Zn-dependent peptidases, insulinase-like General function prediction only 33242094 Common - uridine kinase CpB0763 84 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 33241631 Pathogen - hypothetical protein CpB0296 2 None None None 33242286 Common - 8-amino-7-oxononanoate synthase CpB0956 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 33242099 Common - aromatic amino acid aminotransferase CpB0768 83 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 33241579 Common - glucose-6-phosphate 1-dehydrogenase CpB0244 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 33241378 Common - hypothetical protein CpB0043 110 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 33242322 Common - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase CpB0991 190 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 33242340 Common sucC succinyl-CoA synthetase subunit beta CpB1009 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 33242209 Common - swf/snf helicase CpB0878 159 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 33242254 Common alaS alanyl-tRNA synthetase CpB0923 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241360 Common - putative outer membrane protein CpB0025 12 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 33241854 Common dnaK molecular chaperone DnaK CpB0523 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 33241717 Pathogen - hypothetical protein CpB0384 1 None None None 33241545 Common - hypothetical protein CpB0210 7 None None None 33242166 Common thrS threonyl-tRNA synthetase CpB0835 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241739 Common - hemolysin CpB0406 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 33241801 Common - outer membrane protein 4 CpB0468 13 None None None 33242399 Pathogen - hypothetical protein CpB1069 1 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 33241965 Common rho transcription termination factor Rho CpB0634 206 COG1158 Rho, Transcription termination factor Transcription 33241646 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CpB0311 154 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 33242247 Pathogen - histone H1-like protein CpB0916 3 None None None 33242419 Pathogen - hypothetical protein CpB1087 1 None None None 33242271 Pathogen - hypothetical protein CpB0940 3 None None None 33242192 Common - lipoyl synthase CpB0861 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 33241795 Common - Omp5 CpB0462 7 None None None 33242366 Common - putative p-loop ATPase CpB1035 215 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 33242329 Common rpmF 50S ribosomal protein L32 CpB0998 6 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 33242326 Pathogen - glycerol-3-phosphate acyltransferase CpB0995 3 None None None 33241537 Common oppB oligopeptide transport system permease protein CpB0202 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 33242114 Pathogen - hypothetical protein CpB0783 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33241581 Pathogen - hypothetical protein CpB0246 1 None None None 33241523 Common - ribulose-phosphate 3-epimerase CpB0188 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 33242337 Common - tyrosine-specific transport protein CpB1006 35 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 33242407 Common aroB 3-dehydroquinate synthase CpB1076 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 33241539 Common oppD oligopeptide transport ATP-binding protein CpB0204 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 33242133 Pathogen - hypothetical protein CpB0803 2 None None None 33241994 Common rplN 50S ribosomal protein L14 CpB0663 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 33241612 Common - SUA5 protein CpB0277 208 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 33242288 Pathogen - hypothetical protein CpB0957 2 None None None 33241726 Pathogen - hypothetical protein CpB0393 2 None None None 33242190 Pathogen - hypothetical protein CpB0859 1 None None None 33242199 Common - phosphatidylserine decarboxylase CpB0868 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 33242417 Common phhA phenylalanine 4-monooxygenase CpB1086 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 33242061 Common - serine/threonine-protein kinase CpB0730 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 33241836 Pathogen - hypothetical protein CpB0505 1 None None None 33241441 Common psiH phosphate starvation-inducible protein CpB0106 197 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 161484686 Common rpsJ 30S ribosomal protein S10 CpB0570 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 33241638 Common - cAMP-dependent protein kinase type I regulatory subunit CpB0303 34 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 33242311 Pathogen - hypothetical protein CpB0980 2 None None None 33241912 Pathogen - hypothetical protein CpB0581 2 None None None 33241570 Common - hypothetical protein CpB0235 12 None None None 33242173 Common - X-Pro aminopeptidase CpB0842 240 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 33241849 Pathogen - hypothetical protein CpB0518 1 None None None 33241521 Common - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit CpB0186 170 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 33241433 Common - lipid A biosynthesis lauroyl acyltransferase CpB0098 77 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 33241976 Common ndk nucleoside diphosphate kinase CpB0645 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 33241828 Pathogen - hypothetical protein CpB0495 3 None None None 33241954 Common - oligopeptide ABC transporter CpB0623 152 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 33242058 Common - hypothetical protein CpB0727 14 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 33241808 Pathogen - hypothetical protein CpB0475 1 None None None 33242238 Common - putative set domain protein CpB0907 8 COG2940 COG2940, Proteins containing SET domain General function prediction only 33242112 Pathogen - hypothetical protein CpB0781 2 None None None 33242256 Common - AMP nucleosidase CpB0925 84 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 33241724 Pathogen - hypothetical protein CpB0391 3 None None None 33241382 Pathogen - HB3/HB4 fusion protein CpB0047 1 None None None 33241491 Pathogen - hypothetical protein CpB0156 1 None None None 161484683 Common rpsT 30S ribosomal protein S20 CpB0782 85 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 33241463 Common - HB7 protein CpB0128 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33241407 Pathogen - hypothetical protein CpB0072 2 None None None 33242392 Pathogen - hypothetical protein CpB1061 2 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 33242032 Common - fmu methyltransferase CpB0701 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 33241787 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CpB0453 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 33242135 Common - hypothetical protein CpB0804 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 33242079 Common - hypothetical protein CpB0748 57 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 33241562 Pathogen - hypothetical protein CpB0227 1 None None None 33242211 Common - phosphoenolpyruvate carboxykinase CpB0880 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 33241986 Common secY preprotein translocase subunit SecY CpB0655 216 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 33241997 Common rplP 50S ribosomal protein L16 CpB0666 217 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 33242333 Common lpxB lipid-A-disaccharide synthase CpB1002 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 33241960 Common - putative methylase CpB0629 212 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 33242155 Common - hypothetical protein CpB0824 5 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 33241515 Pathogen - hypothetical protein CpB0180 1 None None None 33241602 Common - YecA CpB0267 7 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 33242039 Common - hypothetical protein CpB0708 37 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 33241752 Pathogen - hypothetical protein CpB0419 1 None None None 33241344 Pathogen - HB2 protein CpB0009 1 None None None 33242072 Common hemA glutamyl-tRNA reductase CpB0741 162 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 33242290 Pathogen - hypothetical protein CpB0959 2 None None None 33242023 Common dnaE DNA polymerase III subunit alpha CpB0692 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 33242382 Common fumC fumarate hydratase CpB1051 230 COG0114 FumC, Fumarase Energy production and conversion 33241769 Pathogen - hypothetical protein CpB0436 3 None None None 33242297 Common cysS cysteinyl-tRNA synthetase CpB0966 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241944 Common recO DNA repair protein RecO CpB0613 5 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 33241707 Common - ferredoxin IV CpB0374 12 COG0633 Fdx, Ferredoxin Energy production and conversion 33242174 Pathogen - hypothetical protein CpB0843 3 None None None 33242202 Pathogen - hypothetical protein CpB0872 1 None None None 33241599 Pathogen - hypothetical protein CpB0264 2 None None None 33242139 Common - protein p60 precursor CpB0808 5 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 33242143 Common exbD ExbD CpB0812 50 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 33242162 Common - tryptophanyl-tRNA synthetase CpB0831 249 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 33241698 Pathogen - hypothetical protein CpB0365 1 None None None 33242161 Common - excinuclease ABC subunit B CpB0830 224 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 33241856 Common - proteins of ribonuclease CpB0525 192 COG0557 VacB, Exoribonuclease R Transcription 33241395 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase CpB0060 181 COG0756 Dut, dUTPase Nucleotide transport and metabolism 33241362 Common - putative ABC transporter protein ATPase CpB0027 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 33242168 Pathogen - hypothetical protein CpB0837 2 None None None 33242014 Common - hypothetical protein CpB0683 124 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 33242432 Common - 1-deoxy-D-xylulose-5-phosphate synthase CpB1102 208 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 33241735 Common ruvB Holliday junction DNA helicase B CpB0402 213 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 33242076 Pathogen - hypothetical protein CpB0745 2 None None None 33241759 Common - DNA polymerase III subunit epsilon CpB0426 181 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 33241409 Common tuf elongation factor Tu CpB0074 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 33241625 Common - extreme acid resistance protein xasA CpB0290 114 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 33241877 Common - hypothetical protein CpB0546 40 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 33241446 Common - signal peptidase I CpB0111 112 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 33241469 Pathogen - hypothetical protein CpB0134 2 None None None 33241890 Pathogen - hypothetical protein CpB0559 2 COG4980 GvpP, Gas vesicle protein General function prediction only 33241925 Pathogen - hypothetical protein CpB0594 2 COG3889 COG3889, Predicted solute binding protein General function prediction only 33242183 Common - YOP proteins translocation protein T CpB0852 72 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 33242397 Pathogen - hypothetical protein CpB1066 1 None None None 33241680 Common apbE thiamine biosynthesis lipoprotein precursor CpB0346 129 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 33242355 Common - putative rRNA methylase CpB1025 28 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 33241661 Common nusA transcription elongation factor NusA CpB0326 216 COG0195 NusA, Transcription elongation factor Transcription 33241897 Common rpmA 50S ribosomal protein L27 CpB0566 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 161484684 Common rplC 50S ribosomal protein L3 CpB0673 211 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 33241942 Common - ribosomal protein S30AE CpB0611 6 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 33241555 Pathogen - hypothetical protein CpB0220 1 None None None 33241648 Common - pyruvate dehydrogenase complex E1 alpha subunit CpB0313 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 33241872 Common clp ATP-dependent Clp protease proteolytic subunit CpB0541 212 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 33241791 Pathogen - hypothetical protein CpB0458 2 None None None 33241902 Common - elongation factor G CpB0571 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 33241935 Common truA tRNA pseudouridine synthase A CpB0605 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 33242103 Common - delta-aminolevulinic acid dehydratase CpB0772 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 33241500 Pathogen - hypothetical protein CpB0165 1 None None None 33242320 Common rpsR 30S ribosomal protein S18 CpB0989 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 33242324 Common - hypothetical protein CpB0993 16 None None None 33241525 Common - hypothetical protein CpB0190 27 COG0500 SmtA, SAM-dependent methyltransferases Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 33242368 Common - polynucleotide phosphorylase/polyadenylase CpB1037 237 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 33241884 Common - riboflavin synthase subunit alpha CpB0553 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 33241616 Common - DNA gyrase subunit A CpB0281 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 33241359 Pathogen - putative outer membrane protein CpB0024 3 None None None 33241610 Pathogen - hypothetical protein CpB0275 1 None None None 33242303 Pathogen - hypothetical protein CpB0972 2 None None None 33242342 Pathogen - hypothetical protein CpB1011 1 None None None 33241763 Common - acetyl-CoA carboxylase carboxyltransferase subunit alpha CpB0430 198 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 33241909 Pathogen - sulfur-rich protein CpB0578 2 None None None 33241852 Common hrcA heat-inducible transcription repressor CpB0521 149 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 33241617 Common gyrB DNA gyrase subunit B CpB0282 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 33242180 Pathogen - hypothetical protein CpB0849 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 33242090 Pathogen - hypothetical protein CpB0759 1 None None None 33241823 Pathogen - hypothetical protein CpB0490 1 None None None 33242081 Pathogen - hypothetical protein CpB0750 2 None None None 33242318 Common - peptidyl-tRNA hydrolase CpB0987 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 33241715 Pathogen - hypothetical protein CpB0382 2 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 33242066 Pathogen - hypothetical protein CpB0735 2 None None None 33241772 Common - hypothetical protein CpB0439 4 COG2912 COG2912, Uncharacterized conserved protein Function unknown 33241987 Common rplO 50S ribosomal protein L15 CpB0656 206 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 33242097 Common - exodeoxyribonuclease V 135K chain CpB0767 221 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 33242044 Pathogen - hypothetical protein CpB0713 1 None None None 33241868 Pathogen - hypothetical protein CpB0537 1 None None None 33242252 Common hemE uroporphyrinogen decarboxylase CpB0921 175 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 33241982 Common rplQ 50S ribosomal protein L17 CpB0651 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 33242405 Common - putative outer membrane protein CpB1074 4 None None None 33241588 Common rpsI 30S ribosomal protein S9 CpB0253 245 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 33241568 Common - putative disulfide oxidoreductase CpB0233 22 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 33242214 Pathogen - major outer membrane protein CpB0883 2 None None None 33242259 Common cpdA 3,5'-cyclic-nucleotide phosphodiesterase CpB0928 27 COG1409 Icc, Predicted phosphohydrolases General function prediction only 33241561 Pathogen - hypothetical protein CpB0226 1 None None None 33242240 Common - DNA translocase spoIIIE CpB0909 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 33241813 Pathogen - hypothetical protein CpB0480 1 None None None 33241745 Pathogen - hypothetical protein CpB0412 2 None None None 33242316 Pathogen - hypothetical protein CpB0985 1 None None None 33242011 Common - cytosolic acyl coenzyme A thioester hydrolase CpB0680 135 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 33241385 Pathogen - hypothetical protein CpB0050 1 None None None 33241371 Common - heat shock protein dnaJ CpB0036 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 33241971 Pathogen - hypothetical protein CpB0640 1 None None None 33241713 Pathogen - hypothetical protein CpB0380 1 None None None 33242330 Common - fatty acid/phospholipid synthesis protein CpB0999 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 33241509 Common - guaB gene for inosine 5-monophosphase dehydrogenase subunit CpB0174 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 33241729 Pathogen - putative histone-like protein 2 CpB0396 1 None None None 33242068 Pathogen - hypothetical protein CpB0737 2 None None None 33241952 Common - oligopeptide ABC transporter permease protein CpB0621 216 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 33241722 Common - dihydrolipoamide acetyltransferase CpB0389 193 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 33242146 Common mttC MttC CpB0815 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 33241992 Common rplE 50S ribosomal protein L5 CpB0661 243 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 33242110 Pathogen - hypothetical protein CpB0779 2 None None None 33241940 Common - hypothetical protein CpB0609 98 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 33241651 Common - glycogen phosphorylase CpB0316 146 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 33241844 Pathogen - hypothetical protein CpB0513 1 None None None 33242237 Common - hypothetical protein CpB0906 129 COG1881 COG1881, Phospholipid-binding protein General function prediction only 33241778 Common nqrD Na(+)-translocating NADH-quinone reductase subunit D CpB0445 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 33242425 Pathogen - hypothetical protein CpB1095 1 None None None 33241572 Common - ATP-binding cassette-transport protein CpB0237 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 33241838 Pathogen - hypothetical protein CpB0507 3 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 33242420 Common - aspartate-semialdehyde dehydrogenase CpB1089 185 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 33242380 Common - hypothetical protein CpB1049 8 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 33241403 Pathogen - hypothetical protein CpB0068 1 COG3247 HdeD, Uncharacterized conserved protein Function unknown 33241620 Pathogen - hypothetical protein CpB0285 1 None None None 33241627 Pathogen - hypothetical protein CpB0292 1 None None None 33241750 Pathogen - hypothetical protein CpB0417 2 None None None 33241914 Pathogen - early upstream orf EUO CpB0583 3 None None None 33241431 Common - excinuclease ABC subunit A CpB0096 239 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 33241977 Common ruvA Holliday junction DNA helicase motor protein CpB0646 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 33242021 Pathogen - hypothetical protein CpB0690 1 None None None 33241341 Common - outer membrane protein 6 CpB0006 4 None None None 33241797 Common - outer membrane protein 10 CpB0464 26 None None None 33242299 Pathogen rnpA ribonuclease P CpB0967 2 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 33241916 Common recJ ssDNA-specific exonuclease CpB0585 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 33242224 Common - putative pseudouridine synthase CpB0893 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 33241656 Pathogen - hypothetical protein CpB0321 2 None None None 33241705 Common - RNA polymerase sigma factor sigma-28 CpB0372 212 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 33242074 Common - DNA topoisomerase IV subunit B CpB0743 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 33242295 Pathogen - hypothetical protein CpB0964 1 None None None 33242033 Pathogen - hypothetical protein CpB0702 2 None None None 33242151 Pathogen - putative sigma regulatory protein-pp2c phosphatase CpB0820 2 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 33241421 Pathogen HrpE V-type ATP synthase subunit E CpB0086 4 COG1390 NtpE, Archaeal/vacuolar-type H+-ATPase subunit E Energy production and conversion 33241423 Common - V-type ATP synthase subunit A CpB0088 247 COG1155 NtpA, Archaeal/vacuolar-type H+-ATPase subunit A Energy production and conversion 33242176 Common xcpR XcpR CpB0845 217 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 33241821 Pathogen - outer membrane protein CpB0488 2 None None None 33241448 Common rpmE2 50S ribosomal protein L31 type B CpB0113 110 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 161484681 Common aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein CpB1075 197 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 33241784 Common - putative phospholipase D CpB0451 26 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 33242006 Common fmt methionyl-tRNA formyltransferase CpB0675 217 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 33241592 Common rpmG 50S ribosomal protein L33 CpB0257 46 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 33241597 Pathogen - hypothetical protein CpB0262 2 None None None 33241956 Pathogen - hypothetical protein CpB0625 1 None None None 33242048 Common - putative ABC transporter membrane protein CpB0717 176 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 33241863 Common - sigma F regulatory factor CpB0532 47 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 33242213 Pathogen - hypothetical protein CpB0882 2 None None None 33242101 Pathogen - hypothetical protein CpB0770 2 None None None 33242245 Common - protein Hom1 CpB0914 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 33241665 Common ribC bifunctional riboflavin kinase/FMN adenylyltransferase CpB0331 210 COG0196 RibF, FAD synthase Coenzyme metabolism 33241604 Common surE stationary phase survival protein SurE CpB0269 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 33241453 Common trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein CpB0118 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 33242157 Common - hypothetical protein CpB0826 14 COG5563 COG5563, Predicted integral membrane proteins containing uncharacterized repeats Function unknown 33242003 Common rplD 50S ribosomal protein L4 CpB0672 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 33241414 Common rplJ 50S ribosomal protein L10 CpB0079 131 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis