Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete sequence NC_004632 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 29171568 Common - hypothetical protein PSPTO_B0026 33 COG5606 COG5606, Uncharacterized conserved small protein Function unknown 29171561 Common stbC plasmid stability protein StbC PSPTO_B0019 23 COG4691 StbC, Plasmid stability protein General function prediction only 29171608 Common traY-1 traY protein PSPTO_B0069 12 None None None 29171612 Common - PIN domain protein PSPTO_B0073 14 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 29171547 Common - RepA protein, putative PSPTO_B0001 10 None None None 29171596 Pathogen traK-1 traK protein PSPTO_B0056 3 None None None 29171554 Common - hypothetical protein PSPTO_B0009 45 COG3300 COG3300, MHYT domain (predicted integral membrane sensor domain) Signal transduction mechanisms 29171566 Common - resolvase, putative PSPTO_B0024 90 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 29171584 Pathogen - hypothetical protein PSPTO_B0044 1 None None None 29171589 Common - pilT protein, putative PSPTO_B0049 26 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 29171614 Common - trbB protein, putative PSPTO_B0075 5 None None None 29171571 Pathogen - hypothetical protein PSPTO_B0029 1 None None None 29171600 Common traN-1 traN protein PSPTO_B0060 10 None None None 29171582 Common - hypothetical protein PSPTO_B0042 106 COG0579 COG0579, Predicted dehydrogenase General function prediction only 29171578 Common - relaxase/mobilization nuclease MobA, putative PSPTO_B0036 23 None None None 29171594 Common nuc endonuclease PSPTO_B0054 34 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 29171599 Pathogen traM-1 traM protein PSPTO_B0059 6 None None None 29171548 Common - ISPsy3, transposase PSPTO_B0002 31 None None None 29171602 Pathogen traP-1 traP protein PSPTO_B0062 2 None None None 29171587 Pathogen - hypothetical protein PSPTO_B0047 1 None None None 29171611 Common - hypothetical protein PSPTO_B0072 8 None None None 29171592 Common - type IV pilus biogenesis protein PSPTO_B0052 151 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 29171576 Pathogen - hypothetical protein PSPTO_B0034 1 None None None 29171597 Common - DNA primase TraC PSPTO_B0057 41 COG4643 COG4643, Uncharacterized protein conserved in bacteria Function unknown 29171604 Pathogen traR-1 traR protein PSPTO_B0064 1 None None None 29171551 Pathogen - hypothetical protein PSPTO_B0006 1 None None None 29171590 Pathogen - traH protein, putative PSPTO_B0050 2 None None None 29171553 Pathogen - ISPsy3, transposase, internal deletion PSPTO_B0008 3 None None None 29171574 Pathogen - mobC protein PSPTO_B0032 3 None None None 29171563 Common - hypothetical protein PSPTO_B0021 29 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 29171556 Common - hypothetical protein PSPTO_B0012 4 None None None 29171586 Common - hypothetical protein PSPTO_B0046 10 COG0250 NusG, Transcription antiterminator Transcription 29171560 Common stbB plasmid stability protein StbB PSPTO_B0018 50 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 29171595 Pathogen - hypothetical protein PSPTO_B0055 1 None None None 29171588 Pathogen - lipoprotein, putative PSPTO_B0048 1 None None None 29171555 Common - major facilitator family transporter PSPTO_B0010 100 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 29171565 Pathogen - hypothetical protein PSPTO_B0023 1 None None None 29171558 Pathogen - hypothetical protein PSPTO_B0015 1 None None None 29171607 Pathogen traX-1 traX protein PSPTO_B0068 2 None None None 29171609 Pathogen - hypothetical protein PSPTO_B0070 1 None None None 29171562 Common - hypothetical protein PSPTO_B0020 1 None None None 29171579 Pathogen - hypothetical protein PSPTO_B0037 1 None None None 29171613 Common - hypothetical protein PSPTO_B0074 8 None None None 29171567 Common - hypothetical protein PSPTO_B0025 34 COG4679 COG4679, Phage-related protein Function unknown 29171610 Pathogen - surface exclusion protein, putative PSPTO_B0071 2 None None None 29171581 Common - ISPsy4, transposase PSPTO_B0040 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 29171549 Pathogen - hypothetical protein PSPTO_B0003 2 None None None 29171598 Pathogen traL-1 traL protein PSPTO_B0058 3 None None None 29171577 Pathogen - mobilization protein MobB, putative PSPTO_B0035 1 None None None 29171593 Pathogen - hypothetical protein PSPTO_B0053 1 None None None 29171569 Pathogen - hypothetical protein PSPTO_B0027 1 None None None 29171601 Common traO-1 traO protein PSPTO_B0061 5 None None None 29171585 Common - transcriptional regulator, PbsX family PSPTO_B0045 10 COG1396 HipB, Predicted transcriptional regulators Transcription 29171615 Common trbC trbC protein PSPTO_B0076 14 None None None 29171591 Common - traI protein PSPTO_B0051 10 None None None 29171572 Common - hypothetical protein PSPTO_B0030 23 None None None 29171575 Pathogen - hypothetical protein PSPTO_B0033 3 None None None 29171580 Common - transposase/IS protein PSPTO_B0039 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 29171616 Common - transcriptional regulator, GntR family PSPTO_B0077 62 COG1802 GntR, Transcriptional regulators Transcription 29171557 Common - hypothetical protein PSPTO_B0013 37 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 29171603 Pathogen traQ-1 traQ protein PSPTO_B0063 3 None None None 29171583 Common - major facilitator family transporter PSPTO_B0043 121 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 29171550 Common plcA2 phosphoesterase family protein PSPTO_B0005 34 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 29171605 Common traU-1 traU protein PSPTO_B0066 10 None None None 29171573 Pathogen - hypothetical protein PSPTO_B0031 1 None None None 29171570 Pathogen - hypothetical protein PSPTO_B0028 1 None None None 29171564 Common - DnaK suppressor domain protein PSPTO_B0022 2 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 29171552 Common - PilM protein, putative PSPTO_B0007 5 None None None 29171606 Common traW-1 traW protein PSPTO_B0067 5 None None None 29171559 Pathogen - hypothetical protein PSPTO_B0016 1 None None None