Pseudomonas syringae pv. tomato str. DC3000, complete genome NC_004578 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 28870321 Common - magnesium chelatase, subunit ChII, putative PSPTO_3148 67 COG1239 ChlI, Mg-chelatase subunit ChlI Coenzyme metabolism 28870059 Common - hypothetical protein PSPTO_2877 39 COG1262 COG1262, Uncharacterized conserved protein Function unknown 28871499 Common sodB superoxide dismutase, Fe PSPTO_4363 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 28868037 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PSPTO_0809 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 28868806 Common - ABC transporter, periplasmic substrate-binding protein, putative PSPTO_1600 53 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 28871823 Common - ISPsy5, Orf1 PSPTO_4694 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872707 Common - ParA family protein PSPTO_5608 230 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28872470 Common - amino acid ABC transporter, permease protein PSPTO_5359 175 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 28872700 Common atpA F0F1 ATP synthase subunit alpha PSPTO_5601 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 28871602 Common - hypothetical protein PSPTO_4467 55 COG3164 COG3164, Predicted membrane protein Function unknown 28870785 Common cycL cytochrome c-type biogenesis protein CycL PSPTO_3628 87 COG3088 CcmH, Uncharacterized protein involved in biosynthesis of c-type cytochromes Posttranslational modification, protein turnover, chaperones 28869764 Common - peptide ABC transporter, ATP-binding protein PSPTO_2573 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 28871206 Common dctA-2 C4-dicarboxylate transport protein PSPTO_4063 160 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 28870438 Common - ISPsy7, transposase PSPTO_3274 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869136 Pathogen - hypothetical protein PSPTO_1932 1 None None None 28872418 Common - putrescine ABC transporter, periplasmic putrescine-binding protein PSPTO_5306 132 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 28868021 Common selD selenophosphate synthetase PSPTO_0793 129 COG0709 SelD, Selenophosphate synthase Amino acid transport and metabolism 28870095 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_2916 235 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 28868550 Common - hypothetical protein PSPTO_1342 5 None None None 28872709 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA PSPTO_5610 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 28872102 Common - hypothetical protein PSPTO_4988 3 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28869286 Common - tail length tape meausure protein, internal deletion PSPTO_2082 9 None None None 28870141 Common - oxidoreductase, FAD-binding PSPTO_2963 8 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28872254 Common hslU ATP-dependent protease ATP-binding subunit PSPTO_5141 216 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 28868588 Common hrpS type III transcriptional regulator HrpS PSPTO_1380 168 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28869919 Common metH B12-dependent methionine synthase PSPTO_2732 179 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 28871678 Common - hypothetical protein PSPTO_4544 73 COG0730 COG0730, Predicted permeases General function prediction only 28868877 Common nrdA ribonucleotide-diphosphate reductase subunit alpha PSPTO_1671 227 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 28867853 Common rpsJ 30S ribosomal protein S10 PSPTO_0625 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 28870572 Common - hypothetical protein PSPTO_3408 9 None None None 28868759 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase PSPTO_1553 185 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 28867567 Common - hypothetical protein PSPTO_0336 52 COG4115 COG4115, Uncharacterized protein conserved in bacteria Function unknown 28871373 Common tctD DNA-binding response regulator TctD PSPTO_4231 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28868754 Common rnhB ribonuclease HII PSPTO_1548 238 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 28868593 Pathogen hrpD type III secretion protein HrpD PSPTO_1385 2 None None None 28872702 Common atpF F0F1 ATP synthase subunit B PSPTO_5603 121 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 28871462 Pathogen - hypothetical protein PSPTO_4325 1 None None None 28869244 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase PSPTO_2040 220 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 28868713 Common - hypothetical protein PSPTO_1507 4 None None None 28871942 Common - iojap-related protein PSPTO_4827 201 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 28869032 Common - arginine/ornithine ABC transporter, permease protein PSPTO_1827 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 28870569 Common - hypothetical protein PSPTO_3405 4 None None None 28867291 Common - hypothetical protein PSPTO_0050 8 None None None 28870103 Pathogen - hypothetical protein PSPTO_2924 1 None None None 28871695 Common dppA dipeptide ABC transporter, periplasmic dipeptide-binding protein PSPTO_4561 211 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28869577 Common rpmI 50S ribosomal protein L35 PSPTO_2380 146 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 28868304 Common - type I restriction-modification enzyme, R subunit, putative PSPTO_1089 134 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 28870111 Common - oxidoreductase, aldo/keto reductase family PSPTO_2932 194 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28869209 Common - hypothetical protein PSPTO_2005 36 COG3571 COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 28868558 Common - hypothetical protein PSPTO_1350 3 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 28871464 Common - hypothetical protein PSPTO_4327 4 None None None 28870859 Common - transporter, putative PSPTO_3704 90 None None None 28869665 Common - methyl-accepting chemotaxis protein PSPTO_2472 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28868188 Common - ISPsy6, transposase PSPTO_0968 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870079 Common galE UDP-glucose 4-epimerase PSPTO_2900 231 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 28871877 Common - hypothetical protein PSPTO_4761 14 COG4248 COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains General function prediction only 28871544 Common ftsW cell division protein FtsW PSPTO_4409 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 28867286 Pathogen - hypothetical protein PSPTO_0045 1 None None None 28872479 Common - transposase/IS protein PSPTO_5370 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869783 Common - multidrug resistance protein, AcrA/AcrE family PSPTO_2593 153 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28868219 Common - sugar efflux transporter PSPTO_0999 113 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28867864 Common rplN 50S ribosomal protein L14 PSPTO_0636 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 28868241 Common - phospholipase D family protein PSPTO_1024 40 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 28871856 Common - ISPsy5, transposase PSPTO_4737 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867336 Common - transcriptional regulator, GntR family/aminotransferase, class I PSPTO_0096 227 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 28868663 Common cumA multicopper oxidase PSPTO_1456 130 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 28870369 Common - hypothetical protein PSPTO_3200 14 None None None 28870776 Common - hypothetical protein PSPTO_3618 46 COG1289 COG1289, Predicted membrane protein Function unknown 28872712 Common - hypothetical protein PSPTO_5613 182 COG0759 COG0759, Uncharacterized conserved protein Function unknown 28869856 Common ribBA-2 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein PSPTO_2668 229 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 28872061 Common - YjeF-related protein PSPTO_4947 222 COG0063 COG0063, Predicted sugar kinase Carbohydrate transport and metabolism 28868766 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PSPTO_1560 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 28871113 Common exsB exsB protein PSPTO_3968 178 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 28870063 Pathogen - hypothetical protein PSPTO_2881 1 None None None 28868927 Common - hypothetical protein PSPTO_1721 1 None None None 28867759 Common - hypothetical protein PSPTO_0530 5 None None None 28868274 Common - hypothetical protein PSPTO_1057 20 COG1569 COG1569, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 28869567 Common rbsR ribose operon repressor PSPTO_2370 128 COG1609 PurR, Transcriptional regulators Transcription 28869752 Common phnI phosphonate metabolism protein PhnI PSPTO_2561 45 COG3626 PhnI, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 28868690 Common - response regulator/EAL domain protein PSPTO_1483 161 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 28870760 Common - oxidoreductase, molybdopterin-binding PSPTO_3600 128 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 28869462 Common - hypothetical protein PSPTO_2262 4 None None None 28868086 Common - ISPsy4, transposase PSPTO_0865 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869368 Common - group II intron, maturase PSPTO_2165 90 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 28869534 Common - hypothetical protein PSPTO_2336 11 None None None 28871810 Common cfl coronafacic acid synthetase, ligase component PSPTO_4680 222 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28869340 Common - MbtH-like protein PSPTO_2137 32 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 28870600 Common - aminotransferase, DegT/DnrJ/EryC1/StrS family PSPTO_3439 193 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 28872676 Common - sensor histidine kinase PSPTO_5573 216 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28867674 Common - RNA polymerase sigma factor PSPTO_0444 83 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28871345 Common - polysaccharide deacetylase family protein PSPTO_4203 106 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 28869392 Common - transcriptional regulator, GntR family PSPTO_2190 221 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 28869641 Common - metallo-beta-lactamase superfamily protein PSPTO_2446 30 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 28870169 Common - hypothetical protein PSPTO_2991 35 COG1022 FAA1, Long-chain acyl-CoA synthetases (AMP-forming) Lipid metabolism 28870765 Common - lyase, putative PSPTO_3605 6 None None None 28868477 Common - DNA-binding protein HU family PSPTO_1266 151 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 28872571 Common - hypothetical protein PSPTO_5466 1 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 28871708 Common - glycine betaine/choline ABC transporter permease protein PSPTO_4576 161 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 28867270 Common - transposase PSPTO_0028 51 None None None 28870178 Common - papain cysteine protease family protein PSPTO_3000 23 COG4870 COG4870, Cysteine protease Posttranslational modification, protein turnover, chaperones 28870847 Common - TonB-dependent siderophore receptor PSPTO_3692 118 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28867944 Common - DNA-binding protein PSPTO_0716 20 COG1396 HipB, Predicted transcriptional regulators Transcription 28869202 Common - FixG-related protein PSPTO_1998 80 COG0348 NapH, Polyferredoxin Energy production and conversion 28871449 Common - phosphate transporter family protein PSPTO_4312 155 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 28870377 Common - filamentous haemagglutinin family protein PSPTO_3210 32 COG3210 FhaB, Large exoproteins involved in heme utilization or adhesion Intracellular trafficking and secretion 28872649 Common - ISPsy5, Orf1 PSPTO_5544 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870901 Common - ISPsy7, transposase PSPTO_3746 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871399 Common kefC glutathione-regulated potassium-efflux system protein KefC PSPTO_4259 190 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 28871252 Common livM leucine/isoleucine/valine transporter permease subunit PSPTO_4110 152 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 28871061 Common - hypothetical protein PSPTO_3909 70 COG0121 COG0121, Predicted glutamine amidotransferase General function prediction only 28868720 Common - hypothetical protein PSPTO_1514 1 None None None 28869177 Common fliQ flagellar biosynthesis protein FliQ PSPTO_1973 125 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 28871322 Common metR transcriptional activator MetR PSPTO_4180 186 COG0583 LysR, Transcriptional regulator Transcription 28871887 Common - hypothetical protein PSPTO_4771 6 None None None 28870292 Common - glycosyl hydrolase, family 15 PSPTO_3119 71 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 28868379 Common - ISPssy, transposase PSPTO_1166 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869187 Common cheB-2 chemotaxis-specific methylesterase PSPTO_1983 210 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 28870478 Common gspH general secretion pathway protein H PSPTO_3314 4 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 28872434 Common - hypothetical protein PSPTO_5322 1 None None None 28867752 Common - Fic family protein PSPTO_0523 66 COG3177 COG3177, Uncharacterized conserved protein Function unknown 28871918 Common - hypothetical protein PSPTO_4803 15 COG4517 COG4517, Uncharacterized protein conserved in bacteria Function unknown 28868949 Common - N-ethylammeline chlorohydrolase PSPTO_1743 177 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 28869968 Common kdgK 2-dehydro-3-deoxygluconokinase PSPTO_2782 138 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 28870871 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_3716 170 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 28870623 Common - TonB-dependent siderophore receptor PSPTO_3462 85 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28872075 Common - hypothetical protein PSPTO_4961 50 COG3577 COG3577, Predicted aspartyl protease General function prediction only 28870612 Common ssuE NAD(P)H-dependent FMN reductase PSPTO_3451 57 COG0431 COG0431, Predicted flavoprotein General function prediction only 28869973 Common - ABC transporter, permease protein PSPTO_2787 196 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 28870864 Common - hypothetical protein PSPTO_3709 1 None None None 28868374 Common - bmp family protein PSPTO_1159 97 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 28870153 Common modC molybdate ABC transporter, ATP-binding protein PSPTO_2975 249 COG4148 ModC, ABC-type molybdate transport system, ATPase component Inorganic ion transport and metabolism 28869004 Common - hypothetical protein PSPTO_1798 28 COG3526 COG3526, Uncharacterized protein conserved in bacteria Posttranslational modification, protein turnover, chaperones 28870245 Common - acetyltransferase, GNAT family PSPTO_3070 17 COG2153 ElaA, Predicted acyltransferase General function prediction only 28867535 Common - sensory box/GGDEF domain protein PSPTO_0304 189 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28870295 Common gnd 6-phosphogluconate dehydrogenase-like protein PSPTO_3122 183 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 28869807 Common - transcriptional regulator, LysR family PSPTO_2617 150 COG0583 LysR, Transcriptional regulator Transcription 28870567 Common - baseplate assembly protein V PSPTO_3403 26 COG4540 gpV, Phage P2 baseplate assembly protein gpV General function prediction only 28868832 Common - hypothetical protein PSPTO_1626 16 None None None 28870875 Common - ABC transporter, ATP-binding protein PSPTO_3720 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 28872226 Common - hypothetical protein PSPTO_5113 36 COG3950 COG3950, Predicted ATP-binding protein involved in virulence General function prediction only 28870894 Common - ABC transporter, ATP-binding protein PSPTO_3739 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 28868568 Common - bmp family protein PSPTO_1360 86 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 28869285 Common - hypothetical protein PSPTO_2081 5 None None None 28869446 Common kdpC potassium-transporting ATPase subunit C PSPTO_2244 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 28870346 Common - hypothetical protein PSPTO_3175 1 None None None 28871987 Common - hypothetical protein PSPTO_4872 2 None None None 28867423 Common tag DNA-3-methyladenine glycosidase I PSPTO_0183 132 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 28869039 Common aruG arginine N-succinyltransferase, beta subunit PSPTO_1834 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 28867275 Common - ParB family protein PSPTO_0033 94 COG1475 Spo0J, Predicted transcriptional regulators Transcription 28871388 Common - hypothetical protein PSPTO_4246 5 None None None 28868314 Common - ISPsy5, Orf1 PSPTO_1099 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868966 Common - threonine/serine transporter PSPTO_1760 33 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 28868042 Common - hypothetical protein PSPTO_0814 1 COG4726 PilX, Tfp pilus assembly protein PilX Cell motility and secretion / Intracellular trafficking and secretion 28872026 Common - urease accessory protein, putative PSPTO_4912 41 COG2370 HupE, Hydrogenase/urease accessory protein Posttranslational modification, protein turnover, chaperones 28868470 Pathogen - hypothetical protein PSPTO_1259 1 None None None 28870868 Common - hypothetical protein PSPTO_3713 59 None None None 28871412 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_4275 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28868749 Common - outer membrane protein OmpH, putative PSPTO_1543 55 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 28871234 Common - hypothetical protein PSPTO_4092 81 COG3146 COG3146, Uncharacterized protein conserved in bacteria Function unknown 28867761 Common - lipoprotein, putative PSPTO_0532 8 None None None 28868414 Common - lipoprotein, putative PSPTO_1201 13 None None None 28869331 Common - response regulator PSPTO_2128 224 COG3437 COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain Transcription / Signal transduction mechanisms 28869823 Common - cation ABC transporter, permease protein PSPTO_2634 182 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 28870592 Common - hypothetical protein PSPTO_3428 5 None None None 28870215 Common - alcohol dehydrogenase, zinc-containing PSPTO_3039 170 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28867433 Common - ISPsy5, Orf1 PSPTO_0197 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871906 Common - cation efflux family protein PSPTO_4790 214 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 28867807 Common - sigma factor domain protein PSPTO_0579 6 None None None 28870047 Common - 4-carboxymuconolactone decarboxylase, putative PSPTO_2865 91 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 28870164 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_2986 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28870471 Common gspD general secretion pathway protein D PSPTO_3307 142 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 28870922 Pathogen - hypothetical protein PSPTO_3767 1 None None None 28869338 Common pvsA peptide synthase PSPTO_2135 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28871440 Common - efflux transporter, RND family, MFP subunit PSPTO_4303 159 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28867624 Common - renal dipeptidase family protein PSPTO_0394 101 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 28869941 Common - AcrB/AcrD/AcrF family protein PSPTO_2755 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28871037 Common prc tail-specific protease PSPTO_3885 182 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 28871688 Common - sensor histidine kinase PSPTO_4554 56 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869066 Common - short chain dehydrogenase PSPTO_1861 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28870843 Common - hypothetical protein PSPTO_3688 5 COG4244 COG4244, Predicted membrane protein Function unknown 28869141 Common flgE-2 flagellar hook protein FlgE PSPTO_1937 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 28868621 Common yajC preprotein translocase subunit YajC PSPTO_1414 172 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 28867404 Common - transcriptional regulator, LysR family PSPTO_0164 185 COG0583 LysR, Transcriptional regulator Transcription 28868633 Common hscB co-chaperone HscB PSPTO_1426 56 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 28872620 Common - transcriptional regulator, RpiR family PSPTO_5515 90 COG1737 RpiR, Transcriptional regulators Transcription 28868164 Common terD tellurium resistance protein TerD PSPTO_0944 29 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 28870780 Pathogen - hypothetical protein PSPTO_3622 1 None None None 28868358 Common - hypothetical protein PSPTO_1143 91 COG2135 COG2135, Uncharacterized conserved protein Function unknown 28872531 Common - hypothetical protein PSPTO_5423 1 None None None 28869653 Common - hypothetical protein PSPTO_2458 9 COG5620 COG5620, Uncharacterized conserved protein Function unknown 28868056 Common clpB clpB protein PSPTO_0829 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 28868214 Common - carbonic anhydrase PSPTO_0994 148 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 28871832 Pathogen - coronafacic acid synthetase, acyl carrier protein component, putative PSPTO_4707 1 None None None 28872297 Common - acyl-CoA dehydrogenase family protein PSPTO_5185 128 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28870632 Common - putative monovalent cation/H+ antiporter subunit A PSPTO_3471 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 28871118 Common tolA tolA protein PSPTO_3973 9 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 28871301 Common - bacterioferritin-associated ferredoxin PSPTO_4159 37 COG2906 Bfd, Bacterioferritin-associated ferredoxin Inorganic ion transport and metabolism 28871411 Common - transcriptional regulator, TetR family PSPTO_4274 14 COG1309 AcrR, Transcriptional regulator Transcription 28867458 Common lppL lipoprotein LppL PSPTO_0226 1 COG5567 COG5567, Predicted small periplasmic lipoprotein Cell motility and secretion 28869583 Common - C-5 cytosine-specific DNA methylase family protein PSPTO_2386 79 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 28870696 Common - glycosyl transferase, group 1 family protein PslH PSPTO_3535 89 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28870605 Common - transcriptional activator RfaH PSPTO_3444 66 COG0250 NusG, Transcription antiterminator Transcription 28869946 Common - alpha-amylase family protein PSPTO_2760 95 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 28872665 Common - TonB-dependent receptor PSPTO_5560 125 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28872048 Common - RNA methyltransferase, TrmH family, group 3 PSPTO_4934 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 28872493 Pathogen - hypothetical protein PSPTO_5385 1 None None None 28867997 Common - ABC transporter, ATP-binding protein PSPTO_0769 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 28867646 Common - ferredoxin PSPTO_0416 120 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 28869725 Common - membrane protein, TerC family PSPTO_2532 219 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 28868915 Common - cobyrinic acid a,c-diamide synthase PSPTO_1709 137 COG1797 CobB, Cobyrinic acid a,c-diamide synthase Coenzyme metabolism 28869860 Common - NAD(P)H-flavin oxidoreductase PSPTO_2672 118 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 28871681 Common garD D-galactarate dehydratase PSPTO_4547 73 COG2721 UxaA, Altronate dehydratase Carbohydrate transport and metabolism 28872148 Common pilG type IV pilus response regulator PilG PSPTO_5034 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28867661 Common mtgA monofunctional biosynthetic peptidoglycan transglycosylase PSPTO_0431 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 28872697 Common atpC F0F1 ATP synthase subunit epsilon PSPTO_5598 153 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 28868123 Common - ISPssy, transposase PSPTO_0903 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869917 Common cysI sulphite reductase PSPTO_2730 141 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 28872259 Common - polyhydroxyalkanoate granule-associated protein PhaF PSPTO_5147 17 COG3937 COG3937, Uncharacterized conserved protein Function unknown 28871568 Common cysD sulfate adenylyltransferase subunit 2 PSPTO_4433 140 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 28869346 Common - hypothetical protein PSPTO_2143 10 None None None 28869028 Common phhR phenylalanine hydroxylase transcriptional activator PhhR PSPTO_1823 171 COG3283 TyrR, Transcriptional regulator of aromatic amino acids metabolism Transcription / Amino acid transport and metabolism 28871524 Pathogen - hypothetical protein PSPTO_4388 1 None None None 28869485 Common - hypothetical protein PSPTO_2285 32 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 28867706 Common - hypothetical protein PSPTO_0476 1 None None None 28870826 Common - hypothetical protein PSPTO_3671 16 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 28870433 Common pstS phosphate ABC transporter, periplasmic phosphate-binding protein PSPTO_3269 111 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 28872637 Common cadA-2 cadmium-translocating P-type ATPase PSPTO_5532 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 28869326 Common - sensor histidine kinase PSPTO_2123 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28872009 Common ureB urease subunit beta PSPTO_4894 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 28867598 Pathogen - hypothetical protein PSPTO_0368 1 None None None 28871105 Common - hypothetical protein PSPTO_3958 125 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 28870526 Common - acetyltransferase, GNAT family PSPTO_3362 105 COG2153 ElaA, Predicted acyltransferase General function prediction only 28870546 Common - lipoprotein, putative PSPTO_3382 9 COG3212 COG3212, Predicted membrane protein Function unknown 28870824 Common allA ureidoglycolate hydrolase PSPTO_3669 35 COG3194 DAL3, Ureidoglycolate hydrolase Nucleotide transport and metabolism 28871574 Common hisG ATP phosphoribosyltransferase catalytic subunit PSPTO_4439 208 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 28872338 Common - hypothetical protein PSPTO_5226 31 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 28869443 Pathogen - hypothetical protein PSPTO_2241 1 None None None 28869639 Common - acetyltransferase, GNAT family PSPTO_2444 93 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 28872680 Common - transcriptional regulator, MerR family PSPTO_5579 137 COG0789 SoxR, Predicted transcriptional regulators Transcription 28870123 Common - p-hydroxycinnamoyl CoA hydratase/lyase PSPTO_2944 181 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 28869796 Common - transcriptional regulator, AraC family PSPTO_2606 126 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28871980 Common fis DNA-binding protein Fis PSPTO_4865 94 COG2901 Fis, Factor for inversion stimulation Fis, transcriptional activator Transcription / DNA replication, recombination, and repair 28872066 Common motB flagellar motor protein MotB PSPTO_4952 94 COG1360 MotB, Flagellar motor protein Cell motility and secretion 28872518 Pathogen - hypothetical protein PSPTO_5410 1 None None None 28869539 Common pcaB 3-carboxy-cis,cis-muconate cycloisomerase PSPTO_2341 194 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 28871246 Common - ATP-dependent helicase HepA PSPTO_4104 116 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 28870118 Pathogen - hypothetical protein PSPTO_2939 1 None None None 28870408 Common - GGDEF domain protein PSPTO_3243 42 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28870604 Common - tyrosine-protein kinase PSPTO_3443 158 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 28868723 Common - hypothetical protein PSPTO_1517 9 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28871507 Common inaA inaA protein PSPTO_4371 7 None None None 28868506 Common oprB porin B PSPTO_1296 21 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 28871671 Common - peptide ABC transporter, permease protein PSPTO_4537 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28868607 Pathogen hrpO type III secretion protein HrpO PSPTO_1399 1 None None None 28867455 Common - hypothetical protein PSPTO_0223 56 COG3159 COG3159, Uncharacterized protein conserved in bacteria Function unknown 28867866 Common rplE 50S ribosomal protein L5 PSPTO_0638 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 28869308 Common - major facilitator family transporter PSPTO_2104 125 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869710 Common - sodium/hydrogen exchanger family protein PSPTO_2517 106 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 28870054 Common hopL1 type III effector HopL1 PSPTO_2872 14 COG4458 SrfC, Uncharacterized protein conserved in bacteria, putative virulence factor Function unknown 28868405 Common - hypothetical protein PSPTO_1192 6 None None None 28870685 Common - chemotaxis protein CheV, putative PSPTO_3524 163 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28868011 Common mmsB 3-hydroxyisobutyrate dehydrogenase PSPTO_0783 168 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 28872578 Common rubB rubredoxin reductase PSPTO_5473 205 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 28872002 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_4887 149 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 28867977 Common - transcriptional regulator, heavy metal-dependent PSPTO_0749 144 COG0789 SoxR, Predicted transcriptional regulators Transcription 28871042 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSPTO_3890 139 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 28872654 Common - sensor histidine kinase PSPTO_5549 223 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28869059 Common - hypothetical protein PSPTO_1854 1 None None None 28869439 Common - hypothetical protein PSPTO_2237 2 None None None 28870671 Common lexA-2 LexA repressor PSPTO_3510 172 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28872234 Common gltD glutamate synthase subunit beta PSPTO_5121 191 COG0493 GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases Amino acid transport and metabolism / General function prediction only 28867927 Common ispA geranyltranstransferase PSPTO_0699 241 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 28867913 Common - hypothetical protein PSPTO_0685 1 None None None 28869867 Pathogen - hypothetical protein PSPTO_2679 1 None None None 28872305 Common - efflux transporter, RND family, MFP subunit PSPTO_5193 150 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28870362 Common - metalloprotease, putative PSPTO_3193 90 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 28869619 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein PSPTO_2424 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 28869646 Common soxD-2 sarcosine oxidase, delta subunit PSPTO_2451 18 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 28871303 Common - glutaredoxin-related protein PSPTO_4161 126 COG0278 COG0278, Glutaredoxin-related protein Posttranslational modification, protein turnover, chaperones 28872243 Common pilO type IV pilus biogenesis protein PilO PSPTO_5130 48 COG3167 PilO, Tfp pilus assembly protein PilO Cell motility and secretion / Intracellular trafficking and secretion 28870421 Common - iron ABC transporter, permease protein, putative PSPTO_3257 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 28868976 Common - transcriptional regulator, LysR family PSPTO_1770 169 COG0583 LysR, Transcriptional regulator Transcription 28868293 Common - lipopolysaccharide biosynthesis protein PSPTO_1078 62 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28868530 Common - acetyltransferase, GNAT family PSPTO_1322 2 COG0456 RimI, Acetyltransferases General function prediction only 28871030 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_3878 57 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 28871747 Common ppa-2 inorganic pyrophosphatase PSPTO_4615 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 28871049 Common rdgC recombination associated protein PSPTO_3897 53 COG2974 RdgC, DNA recombination-dependent growth factor C DNA replication, recombination, and repair 28870734 Common - TonB-dependent siderophore receptor, putative PSPTO_3574 115 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28872173 Common - oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor PSPTO_5060 169 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 28869123 Common - hypothetical protein PSPTO_1919 30 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28872277 Common glgP glycogen phosphorylase PSPTO_5165 142 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 28871487 Common - hypothetical protein PSPTO_4351 1 None None None 28870496 Common - protease PrtA PSPTO_3332 29 COG2931 COG2931, RTX toxins and related Ca2+-binding proteins Secondary metabolites biosynthesis, transport, and catabolism 28871007 Common - ABC transporter, permease protein PSPTO_3854 156 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 28869409 Common - lipoprotein, putative PSPTO_2207 1 None None None 28871740 Common - site-specific recombinase, phage integrase family PSPTO_4608 218 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28870283 Common - cointegrate resolution protein T PSPTO_3110 15 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 28869118 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_1914 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28869558 Common - hypothetical protein PSPTO_2361 21 None None None 28868456 Common - polysaccharide deacetylase family protein PSPTO_1245 10 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 28867845 Common rplJ 50S ribosomal protein L10 PSPTO_0617 208 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 28868109 Common - sugar ABC transporter, periplasmic sugar-binding protein PSPTO_0889 63 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28870038 Common - site-specific recombinase, phage integrase family PSPTO_2856 25 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28872155 Common pyrC dihydroorotase PSPTO_5041 207 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 28868709 Common - hypothetical protein PSPTO_1503 16 COG3930 COG3930, Uncharacterized protein conserved in bacteria Function unknown 28870704 Common - hypothetical protein PSPTO_3543 1 None None None 28872362 Common ppk polyphosphate kinase PSPTO_5250 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 28867591 Common typA GTP-binding protein TypA PSPTO_0361 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 28867605 Common - cation efflux family protein PSPTO_0375 176 COG3696 COG3696, Putative silver efflux pump Inorganic ion transport and metabolism 28870517 Common clpA ATP-dependent clp protease, ATP-binding subunit ClpA PSPTO_3353 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 28867695 Common - transcriptional regulator, AraC family PSPTO_0465 145 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28870397 Common - transcriptional regulator, LysR family PSPTO_3231 169 COG0583 LysR, Transcriptional regulator Transcription 28867886 Common - hypothetical protein PSPTO_0658 5 None None None 28872519 Common - ISPsy5, transposase PSPTO_5411 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871617 Common - hypothetical protein PSPTO_4482 45 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 28869714 Common - hypothetical protein PSPTO_2521 15 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 28867723 Common - competence protein ComF, putative PSPTO_0493 174 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 28868700 Common - methyl-accepting chemotaxis protein PSPTO_1493 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28867778 Common apaG ApaG PSPTO_0550 89 COG2967 ApaG, Uncharacterized protein affecting Mg2+/Co2+ transport Inorganic ion transport and metabolism 28872427 Common ssuC aliphatic sulfonates ABC transporter, permease protein PSPTO_5315 192 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 28872460 Common - hypothetical protein PSPTO_5348 9 None None None 28870354 Common - oxidoreductase, aldo/keto reductase family PSPTO_3184 169 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28868280 Common - DnaJ domain protein PSPTO_1065 13 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 28872522 Common - lipoprotein, putative PSPTO_5414 2 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 28870148 Common - ISPsy5, Orf1 PSPTO_2970 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871080 Common - retron reverse transcriptase PSPTO_3930 40 None None None 28867398 Common trpB tryptophan synthase subunit beta PSPTO_0158 226 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 28867911 Common - hypothetical protein PSPTO_0683 11 None None None 28867611 Common - hypothetical protein PSPTO_0381 18 None None None 28869849 Common - transcriptional regulator, LysR family PSPTO_2661 185 COG0583 LysR, Transcriptional regulator Transcription 28867366 Common - alginate biosynthesis protein AlgZ/FimS PSPTO_0126 101 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 28867885 Pathogen - hypothetical protein PSPTO_0657 1 None None None 28871880 Common - ISPsy5, transposase PSPTO_4764 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869772 Common - DNA-binding protein PSPTO_2581 107 COG1396 HipB, Predicted transcriptional regulators Transcription 28868351 Common mqo malate:quinone oxidoreductase PSPTO_1136 54 COG0579 COG0579, Predicted dehydrogenase General function prediction only 158146061 Common - hypothetical protein PSPTO_5630 1 None None None 28867743 Common pqqF coenzyme PQQ synthesis protein F PSPTO_0514 168 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 28872358 Common - amino acid ABC transporter, permease protein PSPTO_5246 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28869114 Common - hypothetical protein PSPTO_1910 28 COG3103 COG3103, SH3 domain protein Signal transduction mechanisms 28871154 Common - hypothetical protein PSPTO_4011 4 None None None 28869432 Common fimA type I pilus biogensis protein FimA PSPTO_2230 14 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 28869702 Common - penicillin-binding protein PSPTO_2509 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 28871013 Common aceE-1 2-oxoacid dehydrogenase subunit E1 PSPTO_3860 142 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 28868147 Common - type IV pilus biogenesis protein PSPTO_0927 28 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 28871308 Common - ybaK/ebsC protein PSPTO_4166 107 COG2606 EbsC, Uncharacterized conserved protein Function unknown 28869052 Common - transcriptional repressor, putative PSPTO_1847 8 None None None 28868260 Common - RNA polymerase sigma factor RpoE PSPTO_1043 162 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28871701 Common - iron-uptake factor PSPTO_4569 107 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 28870029 Common - hypothetical protein PSPTO_2845 4 None None None 28870196 Common - hypothetical protein PSPTO_3020 99 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28868452 Common - alginate biosynthesis protein Alg44 PSPTO_1241 3 None None None 28869527 Common - ISPssy, transposase PSPTO_2328 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869093 Common - hypothetical protein PSPTO_1889 24 COG5383 COG5383, Uncharacterized protein conserved in bacteria Function unknown 28872035 Common pncB nicotinate phosphoribosyltransferase PSPTO_4921 73 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 28871582 Common - toluene tolerance ABC transporter, ATP-binding protein, putative PSPTO_4447 249 COG1127 Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 28871126 Common aspS aspartyl-tRNA synthetase PSPTO_3981 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28869900 Common - chemotaxis protein methyltransferase CheR, putative PSPTO_2713 148 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 28870011 Common - hypothetical protein PSPTO_2826 64 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 28869890 Common xylB xylulokinase PSPTO_2702 175 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 28870489 Common - ISPsy7, transposase PSPTO_3325 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867958 Common - aromatic acid decarboxylase PSPTO_0730 152 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 28871697 Common dppC dipeptide ABC transporter, permease protein PSPTO_4563 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28872310 Common - dioxygenase, TauD/TfdA family PSPTO_5198 47 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 28869937 Common - hypothetical protein PSPTO_2750 92 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 28872568 Common - transcriptional regulator, LysR family PSPTO_5462 173 COG0583 LysR, Transcriptional regulator Transcription 28867255 Common - hypothetical protein PSPTO_0013 3 None None None 28868449 Common algG alginate biosynthesis protein AlgG PSPTO_1238 10 None None None 28872558 Common - HAD-superfamily hydrolase PSPTO_5452 114 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 28871054 Common cysK cysteine synthase A PSPTO_3902 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 28871295 Pathogen - hypothetical protein PSPTO_4153 1 None None None 28870453 Pathogen - hypothetical protein PSPTO_3289 1 None None None 28867764 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_0536 197 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28871947 Common - hypothetical protein PSPTO_4832 11 COG4655 COG4655, Predicted membrane protein Function unknown 28869154 Common - flagellin FlaG, putative PSPTO_1950 17 COG1334 FlaG, Uncharacterized flagellar protein FlaG Cell motility and secretion 28869237 Common - lipoprotein, putative PSPTO_2033 10 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 28871015 Common - hypothetical protein PSPTO_3862 92 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 28869184 Common cheY-2 chemotaxis protein CheY PSPTO_1980 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868486 Common gcvT-2 glycine cleavage system T protein PSPTO_1275 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 28867965 Common - ATP-dependent protease La domain protein PSPTO_0737 36 COG2802 COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease General function prediction only 28870548 Pathogen - hypothetical protein PSPTO_3384 1 None None None 28869199 Common ccoS cytochrome oxidase maturation protein, cbb3-type PSPTO_1995 20 COG3197 FixS, Uncharacterized protein, possibly involved in nitrogen fixation Inorganic ion transport and metabolism 28872379 Common - zinc uptake regulation protein, putative PSPTO_5267 83 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 28867372 Common - DsbB family protein PSPTO_0132 26 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 28872171 Common - aminotransferase PSPTO_5058 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28868365 Common - hypothetical protein PSPTO_1150 19 None None None 28869956 Pathogen - hypothetical protein PSPTO_2770 1 None None None 28868104 Common - transcriptional regulator, LacI family PSPTO_0884 126 COG1609 PurR, Transcriptional regulators Transcription 28870759 Common - hypothetical protein PSPTO_3599 27 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 28871182 Pathogen - hypothetical protein PSPTO_4039 1 None None None 28868847 Pathogen - hypothetical protein PSPTO_1641 1 None None None 28871746 Common - hypothetical protein PSPTO_4614 9 None None None 28869888 Common - hypothetical protein PSPTO_2700 1 None None None 28870554 Common - tail protein D PSPTO_3390 38 COG3500 COG3500, Phage protein D General function prediction only 28868111 Common - hypothetical protein PSPTO_0891 2 None None None 28870818 Common guaD guanine deaminase PSPTO_3663 157 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 28870301 Common - glycosyl hydrolase, family 13 PSPTO_3128 97 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 28870943 Common pepN aminopeptidase N PSPTO_3788 157 COG0308 PepN, Aminopeptidase N Amino acid transport and metabolism 28867635 Common msrA methionine sulfoxide reductase A PSPTO_0405 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 28869413 Common fabA 3-hydroxydecanoyl-(acyl carrier protein) dehydratase PSPTO_2211 82 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 28871950 Common - hypothetical protein PSPTO_4835 1 COG4960 CpaA, Flp pilus assembly protein, protease CpaA Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 28872085 Common - ISPssy, transposase PSPTO_4971 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872615 Common oadA pyruvate carboxylase subunit B PSPTO_5510 198 COG5016 COG5016, Pyruvate/oxaloacetate carboxyltransferase Energy production and conversion 28872033 Common - high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_4919 132 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28867802 Pathogen - lipoprotein, putative PSPTO_0574 1 None None None 28868325 Common hemK hemK protein PSPTO_1110 212 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 28871525 Common - ISPsy5, transposase PSPTO_4389 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870805 Common - mechanosensitive ion channel family protein PSPTO_3649 225 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28871312 Common glpD glycerol-3-phosphate dehydrogenase PSPTO_4170 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 28870399 Common - glutamate carboxypeptidase PSPTO_3233 160 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28872138 Common - potassium efflux protein KefA PSPTO_5024 222 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28871319 Common - 2-hydroxychromene-2-carboxylate isomerase family protein PSPTO_4177 82 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28872394 Common thyA thymidylate synthase PSPTO_5282 135 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 28872384 Common - histidine ABC transporter, permease protein, putative PSPTO_5272 216 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 28871598 Common pmbA pmbA protein PSPTO_4463 154 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 28871170 Common - DNA-binding response regulator, LuxR family PSPTO_4027 190 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28871545 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase PSPTO_4410 208 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 28871975 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit PSPTO_4860 186 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 28871713 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSPTO_4581 139 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 28872181 Common ahcY S-adenosyl-L-homocysteine hydrolase PSPTO_5068 177 COG0499 SAM1, S-adenosylhomocysteine hydrolase Coenzyme metabolism 28870884 Pathogen - lipoprotein, putative PSPTO_3729 1 None None None 28870976 Common - transcriptional regulator, TetR family PSPTO_3822 93 COG1309 AcrR, Transcriptional regulator Transcription 28868648 Common - hydrolase, carbon-nitrogen family PSPTO_1441 201 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28867406 Common - glycine/betaine family, ABC transporter, substrate-binding protein PSPTO_0166 61 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 28868285 Common - lipopolysaccharide biosynthesis protein PSPTO_1070 211 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 28870364 Common - sensor histidine kinase PSPTO_3195 168 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28870444 Common glxK glycerate kinase PSPTO_3280 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 28867809 Common - DNA circulation protein, putative PSPTO_0581 23 COG4228 COG4228, Mu-like prophage DNA circulation protein General function prediction only 28872128 Common - response regulator/sensory box/GGDEF domain/EAL domain protein PSPTO_5014 207 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28867670 Common betI transcriptional regulator BetI PSPTO_0440 51 COG1309 AcrR, Transcriptional regulator Transcription 28870271 Common - methyl-accepting chemotaxis protein PSPTO_3098 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871515 Common fxsA FxsA PSPTO_4379 28 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 28867569 Common - N-acetylmuramoyl-L-alanine amidase, family 2 PSPTO_0338 107 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 28869006 Common - hypothetical protein PSPTO_1800 21 COG4323 COG4323, Predicted membrane protein Function unknown 28869498 Common - RNA polymerase sigma factor SigX PSPTO_2298 163 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28872045 Common - hypothetical protein PSPTO_4931 10 None None None 28868172 Common - hydrolase, TatD family PSPTO_0952 233 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 28868511 Common pgl 6-phosphogluconolactonase PSPTO_1301 113 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 28871636 Common carA carbamoyl phosphate synthase small subunit PSPTO_4502 231 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 28867608 Common - DNA-binding heavy metal response regulator PSPTO_0378 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870584 Common - hypothetical protein PSPTO_3420 4 None None None 28871795 Common - hypothetical protein PSPTO_4663 98 COG2081 COG2081, Predicted flavoproteins General function prediction only 28869043 Common astE succinylglutamate desuccinylase PSPTO_1838 24 COG2988 COG2988, Succinylglutamate desuccinylase Amino acid transport and metabolism 28871610 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B PSPTO_4475 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 28869691 Pathogen - hypothetical protein PSPTO_2498 1 None None None 28870838 Common - hypothetical protein PSPTO_3683 1 None None None 28868890 Common - hypothetical protein PSPTO_1684 159 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 28870913 Common - hypothetical protein PSPTO_3758 38 COG3618 COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 28869491 Common - hypothetical protein PSPTO_2291 113 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 28871071 Common - nitroreductase family protein PSPTO_3919 61 COG0778 NfnB, Nitroreductase Energy production and conversion 28869637 Common - CheW domain protein PSPTO_2442 19 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28872039 Common - hypothetical protein PSPTO_4925 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 28869310 Common sthA soluble pyridine nucleotide transhydrogenase PSPTO_2106 242 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 28871937 Common - lipoprotein, rlpA family PSPTO_4822 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 28868404 Common - hypothetical protein PSPTO_1191 43 COG2912 COG2912, Uncharacterized conserved protein Function unknown 28870721 Common - hypothetical protein PSPTO_3561 26 COG3391 COG3391, Uncharacterized conserved protein Function unknown 28870460 Common - transporter, putative PSPTO_3296 76 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 28872115 Common waaG lipopolysaccharide core biosynthesis protein WaaG PSPTO_5001 115 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28870232 Common - MmgE/PrpD family protein PSPTO_3057 54 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 28871095 Pathogen - hypothetical protein PSPTO_3948 1 None None None 28867618 Common - lipoprotein, putative PSPTO_0388 1 None None None 28870541 Common nuoN NADH dehydrogenase subunit N PSPTO_3377 210 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 28871803 Common - alkaline D-peptidase, putative PSPTO_4671 147 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 28867263 Pathogen - hypothetical protein PSPTO_0021 2 None None None 28870171 Common - ribose ABC transporter, permease protein, putative PSPTO_2993 111 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 28870966 Common purF amidophosphoribosyltransferase PSPTO_3811 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 28870831 Common - hypothetical protein PSPTO_3676 14 COG3905 COG3905, Predicted transcriptional regulator Transcription 28871588 Common rpoN RNA polymerase factor sigma-54 PSPTO_4453 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 28867874 Common secY preprotein translocase subunit SecY PSPTO_0646 233 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 28870131 Common - transcriptional regulator, LysR family PSPTO_2953 44 COG0583 LysR, Transcriptional regulator Transcription 28870833 Common - transcriptional regulator, LysR family PSPTO_3678 172 COG0583 LysR, Transcriptional regulator Transcription 28868943 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_1737 181 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 28868265 Common - hypothetical protein PSPTO_1048 3 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 28870467 Pathogen - hypothetical protein PSPTO_3303 1 None None None 28868121 Pathogen hopAG1 type III effector HopAG1 PSPTO_0901 1 None None None 28867658 Common ftsE cell division ATP-binding protein FtsE PSPTO_0428 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 28870426 Common nirB nitrite reductase [NAD(P)H], large subunit PSPTO_3262 200 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 28872164 Common metW metW protein PSPTO_5050 64 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28868670 Pathogen - hypothetical protein PSPTO_1463 1 None None None 28869678 Common - ISPsy7, transposase PSPTO_2485 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869382 Common - mandelate racemase/muconate lactonizing enzyme family protein PSPTO_2179 123 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 28872617 Common - transcriptional regulator, LysR family PSPTO_5512 193 COG0583 LysR, Transcriptional regulator Transcription 28867356 Common - transcriptional regulator, LysR family PSPTO_0116 163 COG0583 LysR, Transcriptional regulator Transcription 28872686 Common - UDP-glucose 6-dehydrogenase PSPTO_5585 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 28870626 Common - KU domain protein PSPTO_3465 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 28871274 Common - repressor protein c2, putative PSPTO_4132 31 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28868857 Common - hypothetical protein PSPTO_1651 7 None None None 28867573 Pathogen - hypothetical protein PSPTO_0342 1 None None None 28868275 Common - hypothetical protein PSPTO_1058 7 None None None 28871663 Pathogen - hypothetical protein PSPTO_4529 1 None None None 28872229 Common - transcriptional regulator, RpiR family PSPTO_5116 78 COG1737 RpiR, Transcriptional regulators Transcription 28871647 Common - hypothetical protein PSPTO_4513 102 COG2867 COG2867, Oligoketide cyclase/lipid transport protein Lipid metabolism 28871844 Pathogen hopV1 type III effector HopV1 PSPTO_4720 1 None None None 28869696 Pathogen - hypothetical protein PSPTO_2503 2 None None None 28870984 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II PSPTO_3830 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28869083 Common - transcriptional regulator, LysR family PSPTO_1879 175 COG0583 LysR, Transcriptional regulator Transcription 28872533 Common - clpB protein, putative PSPTO_5425 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 28868196 Common - hypothetical protein PSPTO_0976 57 COG2187 COG2187, Uncharacterized protein conserved in bacteria Function unknown 28868635 Common - ferredoxin, 2Fe-2S PSPTO_1428 92 COG0633 Fdx, Ferredoxin Energy production and conversion 28868768 Common surE stationary phase survival protein SurE PSPTO_1562 186 COG0496 SurE, Predicted acid phosphatase General function prediction only 28867840 Common - hypothetical protein PSPTO_0612 1 None None None 28872639 Common - SPFH domain / Band 7 family protein PSPTO_5534 152 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 28872124 Common - amino acid ABC transporter, periplasmic amino acid-binding protein, putative PSPTO_5010 28 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869517 Common - hypothetical protein PSPTO_2317 32 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 28870259 Common - glutamine/glutamate ABC transporter, permease protein PSPTO_3084 169 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28869872 Pathogen - hypothetical protein PSPTO_2684 1 COG5178 PRP8, U5 snRNP spliceosome subunit RNA processing and modification 28867685 Common fdhA-1 glutathione-independent formaldehyde dehydrogenase PSPTO_0455 191 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 28869224 Common - hypothetical protein PSPTO_2020 1 None None None 28868063 Common - hypothetical protein PSPTO_0837 27 COG3506 COG3506, Uncharacterized conserved protein Function unknown 28868140 Common - hypothetical protein PSPTO_0920 1 None None None 28869319 Common - hypothetical protein PSPTO_2116 7 None None None 28868431 Common - fusaric acid resistance protein, putative PSPTO_1218 48 COG1289 COG1289, Predicted membrane protein Function unknown 28869975 Pathogen - hypothetical protein PSPTO_2789 1 None None None 28868417 Common - regulatory protein, putative PSPTO_1204 46 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 28869742 Common - hypothetical protein PSPTO_2551 27 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 28869892 Common - mannitol ABC transporter, permease protein PSPTO_2705 153 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 28870167 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_2989 139 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 28867796 Common trpE anthranilate synthase component I PSPTO_0568 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 28869984 Common - transporter, putative PSPTO_2798 32 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 28869922 Common yhgI yhgI protein PSPTO_2735 39 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 28871115 Common - hypothetical protein PSPTO_3970 98 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 28868730 Common - glycosyl transferase, group 2 family protein PSPTO_1524 120 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 28871360 Common - hypothetical protein PSPTO_4218 7 None None None 28871244 Pathogen - hypothetical protein PSPTO_4102 1 None None None 28869994 Common - transcriptional regulator, LysR family PSPTO_2808 185 COG0583 LysR, Transcriptional regulator Transcription 28867307 Common tonB-1 tonB protein PSPTO_0067 45 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28870886 Common - ISPssy, transposase PSPTO_3731 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28871897 Common - hypothetical protein PSPTO_4781 107 COG0657 Aes, Esterase/lipase Lipid metabolism 28869469 Common - hypothetical protein PSPTO_2269 1 None None None 28869404 Common sucC succinyl-CoA synthetase subunit beta PSPTO_2202 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 28868236 Common - ISPsy5, Orf1 PSPTO_1017 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867946 Pathogen - hypothetical protein PSPTO_0718 1 None None None 28871286 Common dcd deoxycytidine triphosphate deaminase PSPTO_4144 151 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 28871680 Common - hypothetical protein PSPTO_4546 3 None None None 28870268 Common - hypothetical protein PSPTO_3093 1 None None None 28871789 Common - zinc metallopeptidase, putative PSPTO_4657 87 COG2321 COG2321, Predicted metalloprotease General function prediction only 28867721 Common - Tat (twin-arginine translocation) pathway signal sequence domain protein PSPTO_0491 75 COG3211 PhoX, Predicted phosphatase General function prediction only 28869596 Common rbsC-2 ribose ABC transporter, permease protein PSPTO_2400 124 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 28868880 Common fhuF ferric iron reductase protein FhuF PSPTO_1674 18 COG4114 FhuF, Uncharacterized Fe-S protein General function prediction only 28871129 Common - cold shock domain family protein PSPTO_3984 177 COG1278 CspC, Cold shock proteins Transcription 28869012 Common - DNA-binding response regulator PSPTO_1806 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28869033 Common - arginine/ornithine ABC transporter, permease protein PSPTO_1828 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 28868003 Common mmsA-1 methylmalonate-semialdehyde dehydrogenase PSPTO_0775 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28868985 Common - aminotransferase AlaT PSPTO_1779 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28872507 Common - sigma-54 dependent transcriptional regulator/response regulator PSPTO_5399 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28872652 Common - acyltransferase family protein PSPTO_5547 96 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 28867319 Common - exodeoxyribonuclease III, putative PSPTO_0079 191 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 28869425 Common - DNA-binding response regulator PSPTO_2223 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28871400 Common trxA thioredoxin PSPTO_4260 222 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 28870225 Common - transcriptional regulator, AraC family PSPTO_3050 74 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28871564 Common trpS tryptophanyl-tRNA synthetase PSPTO_4429 220 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28872287 Common - hypothetical protein PSPTO_5175 14 None None None 28868133 Common cheA-1 chemotaxis sensor histidine kinase CheA PSPTO_0913 152 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 28871622 Common rpsO 30S ribosomal protein S15 PSPTO_4487 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 28868864 Common - transposase/IS protein PSPTO_1658 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869622 Common - serine hydroxymethyltransferase, putative PSPTO_2427 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 28870285 Common gor-1 glutathione reductase PSPTO_3112 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 28867545 Common - iron ABC transporter, periplasmic iron-binding protein PSPTO_0314 122 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 28872404 Common - fumarylacetoacetate hydrolase family protein PSPTO_5292 179 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 28870582 Common - DNA primase domain protein PSPTO_3418 55 COG5545 COG5545, Predicted P-loop ATPase and inactivated derivatives General function prediction only 28872642 Common - hypothetical protein PSPTO_5537 77 COG2267 PldB, Lysophospholipase Lipid metabolism 28868154 Common - trypsin domain protein PSPTO_0934 209 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 28872506 Common - sensor histidine kinase PSPTO_5398 197 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28872626 Common pdxY pyridoxamine kinase PSPTO_5521 60 COG2240 PdxK, Pyridoxal/pyridoxine/pyridoxamine kinase Coenzyme metabolism 28870642 Pathogen - hypothetical protein PSPTO_3481 1 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28870614 Common - lipoprotein, putative PSPTO_3453 1 None None None 28870811 Common ligA NAD-dependent DNA ligase LigA PSPTO_3656 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 28872053 Common hflC hflC protein PSPTO_4939 187 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 28871624 Common infB translation initiation factor IF-2 PSPTO_4490 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 28868795 Common - lipoprotein, putative PSPTO_1589 15 None None None 28867344 Pathogen - hypothetical protein PSPTO_0104 1 None None None 28869758 Common phnP carbon-phosphorus lyase complex accessory protein PSPTO_2567 89 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 28871765 Common - hypothetical protein PSPTO_4633 12 COG4104 COG4104, Uncharacterized conserved protein Function unknown 28869538 Common pcaK 4-hydroxybenzoate transporter PSPTO_2340 140 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28867826 Common speD S-adenosylmethionine decarboxylase PSPTO_0598 32 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 28871261 Common estC carboxylesterase PSPTO_4119 106 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 28870076 Common - hypothetical protein PSPTO_2897 10 COG2723 BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase Carbohydrate transport and metabolism 28869295 Pathogen - hypothetical protein PSPTO_2091 1 None None None 28872246 Common - penicillin-binding protein PSPTO_5133 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 28872464 Pathogen shcA type III chaperone protein ShcA PSPTO_5353 2 None None None 28871915 Common hemL glutamate-1-semialdehyde aminotransferase PSPTO_4800 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 28869899 Common - sensor histidine kinase/response regulator PSPTO_2712 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871721 Pathogen shcS2 type III chaperone ShcS2 PSPTO_4589 1 None None None 28868226 Common - GDP-6-deoxy-D-lyxo-4-hexulose reductase PSPTO_1007 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28870221 Common - sigma-54 dependent transcriptional regulator PSPTO_3046 176 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 28870807 Common - ISPsy5, transposase PSPTO_3651 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870162 Common - xenobiotic compound monooxygenase, DszA family PSPTO_2984 69 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28870210 Common ppiC-2 peptidyl-prolyl cis-trans isomerase C PSPTO_3034 132 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 28870473 Common - general secretion pathway protein M, putative PSPTO_3309 4 None None None 28869591 Common - transcriptional regulator, putative PSPTO_2395 68 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 28867899 Common - TonB-dependent receptor, putative PSPTO_0671 77 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28870290 Common - hypothetical protein PSPTO_3117 1 None None None 28871213 Pathogen - hypothetical protein PSPTO_4070 2 None None None 28871732 Common - lipoprotein, putative PSPTO_4600 5 None None None 28869800 Common - phosphoesterase, putative PSPTO_2610 57 COG0622 COG0622, Predicted phosphoesterase General function prediction only 28872543 Common hcp-2 secreted protein Hcp PSPTO_5435 32 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 28868526 Common - hypothetical protein PSPTO_1318 10 None None None 28870990 Common - hypothetical protein PSPTO_3836 17 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 28868166 Common - tellurium resistance protein, putative PSPTO_0946 24 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 28872016 Common - hypothetical protein PSPTO_4901 97 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 28872594 Common - cytosolic long-chain acyl-CoA thioester hydrolase family protein PSPTO_5489 133 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 28869068 Common - hydrolase, alpha/beta fold family PSPTO_1863 152 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28869102 Common - hypothetical protein PSPTO_1898 1 None None None 28867903 Common - arylesterase PSPTO_0675 185 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28867513 Common - hypothetical protein PSPTO_0281 4 None None None 28871998 Common - hypothetical protein PSPTO_4883 71 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 28870916 Common - hypothetical protein PSPTO_3761 1 None None None 28869268 Common - magnesium and cobalt transport protein, putative PSPTO_2064 162 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 28871189 Common - tail tape meausure protein PSPTO_4046 33 COG5281 COG5281, Phage-related minor tail protein Function unknown 28868684 Common - ISPsy6, transposase PSPTO_1477 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871436 Common - hypothetical protein PSPTO_4299 1 None None None 28868345 Common upp uracil phosphoribosyltransferase PSPTO_1130 166 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 28867781 Common surA peptidyl-prolyl cis-trans isomerase SurA PSPTO_0553 164 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 28872096 Common - hypothetical protein PSPTO_4982 1 None None None 28870716 Common glcD glycolate oxidase subunit GlcD PSPTO_3555 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 28870693 Common - exopolysaccharide biosythesis protein PslE PSPTO_3532 56 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 28872201 Pathogen - hypothetical protein PSPTO_5088 1 None None None 28872322 Pathogen - EF hand domain protein PSPTO_5210 8 None None None 115532025 Pathogen hopD hopD PSPTO_4724 1 None None None 28871553 Common - tetrapyrrole methylase family protein PSPTO_4418 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 90818606 Pathogen - PSPTO5619 PSPTO_5619 1 None None None 28872192 Common madM malonate transporter, MadM subunit PSPTO_5079 11 None None None 28868093 Common - amidinotransferase family protein PSPTO_0873 21 COG1834 COG1834, N-Dimethylarginine dimethylaminohydrolase Amino acid transport and metabolism 28871932 Common hopAJ2 type III effector HopAJ2 PSPTO_4817 106 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 28868955 Common cmk cytidylate kinase PSPTO_1749 205 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 28869134 Common cynS cyanate hydratase PSPTO_1930 41 COG1513 CynS, Cyanate lyase Inorganic ion transport and metabolism 28871656 Common - hypothetical protein PSPTO_4522 11 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 28867523 Common - ISPsy4, transposase PSPTO_0292 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871771 Common - hypothetical protein PSPTO_4639 17 None None None 28869472 Common oprI outer membrane lipoprotein OprI PSPTO_2272 1 None None None 28871876 Common - DNA-binding protein PSPTO_4760 1 None None None 28871476 Common - fumarate hydratase, class I, putative PSPTO_4339 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 28872447 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase PSPTO_5335 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 28869171 Pathogen - hypothetical protein PSPTO_1967 1 None None None 28869253 Common - hypothetical protein PSPTO_2049 1 None None None 28867736 Common - hypothetical protein PSPTO_0507 22 COG0401 COG0401, Uncharacterized homolog of Blt101 Function unknown 28868023 Common - hypothetical protein PSPTO_0795 29 None None None 28869785 Common pchA salicylate biosynthesis isochorismate synthase PSPTO_2595 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28872344 Common - pyocin/colicin protein, putative PSPTO_5232 8 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 28870308 Common - hypothetical protein PSPTO_3135 47 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 28872190 Common - hemolysin III PSPTO_5077 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 28872292 Common - cystine transporter subunit PSPTO_5180 189 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28867890 Common ugpE glycerol-3-phosphate ABC transporter, permease protein PSPTO_0662 146 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 28869061 Common - transcriptional regulator, AraC family PSPTO_1856 143 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28867978 Common - copper-translocating P-type ATPase PSPTO_0750 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 162533086 Common - hypothetical protein PSPTO_5632 2 None None None 28871329 Pathogen - hypothetical protein PSPTO_4187 1 None None None 28871453 Common sbcB exonuclease I PSPTO_4316 53 COG2925 SbcB, Exonuclease I DNA replication, recombination, and repair 28869355 Common - TonB-dependent siderophore receptor, putative PSPTO_2152 112 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28868389 Pathogen - hypothetical protein PSPTO_1176 1 None None None 28869019 Common - hypothetical protein PSPTO_1813 144 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 28869500 Common cobA uroporphyrin-III C-methyltransferase PSPTO_2300 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 28868862 Common - hypothetical protein PSPTO_1656 43 COG1479 COG1479, Uncharacterized conserved protein Function unknown 28867621 Common - hypothetical protein PSPTO_0391 8 None None None 28871043 Pathogen - hypothetical protein PSPTO_3891 1 None None None 28868296 Common rfbB-1 dTDP-glucose 4,6-dehydratase PSPTO_1081 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 28869834 Common - hypothetical protein PSPTO_2645 125 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 28871164 Common - S4 domain protein PSPTO_4021 149 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 28869504 Common - nitrate transporter PSPTO_2304 97 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 28869375 Common - transcriptional regulator, LysR family PSPTO_2172 193 COG0583 LysR, Transcriptional regulator Transcription 28871074 Common rnd ribonuclease D PSPTO_3922 114 COG0349 Rnd, Ribonuclease D Translation, ribosomal structure and biogenesis 28871194 Pathogen - hypothetical protein PSPTO_4051 1 None None None 28869073 Common - hypothetical protein PSPTO_1869 10 None None None 28868571 Common - sugar transporter family protein PSPTO_1363 178 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870534 Common nuoG NADH dehydrogenase subunit G PSPTO_3370 181 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 28867385 Common - hypothetical protein PSPTO_0145 187 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 28868654 Common - hypothetical protein PSPTO_1447 1 None None None 28867647 Common coaD phosphopantetheine adenylyltransferase PSPTO_0417 209 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 28868465 Common estA carboxylesterase PSPTO_1254 89 COG0400 COG0400, Predicted esterase General function prediction only 28872710 Common trmE tRNA modification GTPase TrmE PSPTO_5611 226 COG0486 ThdF, Predicted GTPase General function prediction only 28870241 Common - membrane protein PSPTO_3066 29 None None None 28870796 Common - transcriptional regulator, LysR family PSPTO_3639 171 COG0583 LysR, Transcriptional regulator Transcription 28868547 Common - hypothetical protein PSPTO_1339 10 None None None 28867680 Common - ISPsy8, transposase OrfB PSPTO_0450 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870650 Common - sugar ABC transporter, ATP-binding protein PSPTO_3489 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 28871579 Common - toluene tolerance protein, putative PSPTO_4444 51 COG2854 Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component Secondary metabolites biosynthesis, transport, and catabolism 28872477 Common - ISPsy5, Orf1 PSPTO_5367 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867249 Common - type I restriction-modification system, S subunit, EcoA family PSPTO_0006 72 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 28868533 Common cyoA cytochrome o ubiquinol oxidase, subunit II PSPTO_1325 123 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 28869553 Pathogen - hypothetical protein PSPTO_2356 1 None None None 28870790 Common ccmC heme exporter protein CcmC PSPTO_3633 115 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 28871865 Common - site-specific recombinase, phage integrase family PSPTO_4748 32 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28869477 Common - 5'-nucleotidase, putative PSPTO_2277 30 None None None 28868346 Common hpt hypoxanthine-guanine phosphoribosyltransferase PSPTO_1131 106 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 28871335 Common - iron utilization protein, putative PSPTO_4193 62 COG2375 ViuB, Siderophore-interacting protein Inorganic ion transport and metabolism 28872585 Common - peptidase, M23/M37 family PSPTO_5480 182 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 28872218 Common - hypothetical protein PSPTO_5105 145 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28872372 Common metQ-2 D-methionine-binding lipoprotein MetQ PSPTO_5260 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 28868525 Common - fimbral chaperone protein PSPTO_1317 25 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 28868904 Common - hypothetical protein PSPTO_1698 18 None None None 28871503 Common - lipoprotein, putative PSPTO_4367 49 COG3488 COG3488, Predicted thiol oxidoreductase Energy production and conversion 28871739 Common - hypothetical protein PSPTO_4607 6 None None None 28870506 Common - hypothetical protein PSPTO_3342 156 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 28869359 Common - renal dipeptidase family protein PSPTO_2156 101 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 28867473 Common - hypothetical protein PSPTO_0241 4 None None None 28869569 Common - ribose ABC transporter protein PSPTO_2372 47 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 28871560 Common rpsI 30S ribosomal protein S9 PSPTO_4425 249 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 28869610 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_2415 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 28871040 Common - hypothetical protein PSPTO_3888 1 None None None 28871107 Common pglA polygalacturonase PSPTO_3960 23 COG5434 PGU1, Endopygalactorunase Cell envelope biogenesis, outer membrane 28871331 Pathogen - hypothetical protein PSPTO_4189 1 None None None 28870437 Common - hypothetical protein PSPTO_3273 19 COG3613 COG3613, Nucleoside 2-deoxyribosyltransferase Nucleotide transport and metabolism 28870691 Common - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase PslB PSPTO_3530 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 28868159 Common - HAD-superfamily hydrolase PSPTO_0939 22 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 28868911 Common - NLP/P60 family protein PSPTO_1705 135 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 28867392 Common osmC osmotically inducible protein PSPTO_0152 97 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 28869663 Common - senescence marker protein-30 family protein PSPTO_2470 60 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 28870387 Common - ISPsy5, Orf1 PSPTO_3221 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869283 Common - hypothetical protein PSPTO_2079 5 None None None 28871137 Common - hypothetical protein PSPTO_3992 19 COG3946 VirJ, Type IV secretory pathway, VirJ component Intracellular trafficking and secretion 28871485 Common - phospholipase D family protein PSPTO_4349 149 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 28870602 Common - glycosyl transferase, group 2 family protein PSPTO_3441 140 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28871885 Common - ISPsy4, transposase PSPTO_4769 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868150 Common - hypothetical protein PSPTO_0930 6 None None None 28868412 Pathogen - hypothetical protein PSPTO_1199 1 None None None 28872073 Common - lipoprotein, putative PSPTO_4959 21 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 28867429 Common - recombinase, putative PSPTO_0192 50 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 28867791 Common - polyamine ABC transporter, periplasmic polyamine-binding protein PSPTO_0563 87 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 28869221 Common - hypothetical protein PSPTO_2017 46 COG2933 COG2933, Predicted SAM-dependent methyltransferase General function prediction only 28871769 Common - hypothetical protein PSPTO_4637 27 COG2879 COG2879, Uncharacterized small protein Function unknown 28868034 Common ileS isoleucyl-tRNA synthetase PSPTO_0806 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28871785 Common - xanthine/uracil permease family protein PSPTO_4653 134 COG2252 COG2252, Permeases General function prediction only 28871343 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_4201 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28871817 Common cfa7 coronafacic acid polyketide synthetase II PSPTO_4687 210 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28870108 Common - hypothetical protein PSPTO_2929 1 None None None 28871047 Pathogen - hypothetical protein PSPTO_3895 1 None None None 28871418 Common - hypothetical protein PSPTO_4281 81 COG1238 COG1238, Predicted membrane protein Function unknown 28870116 Common - transcriptional regulator, LysR family PSPTO_2937 191 COG0583 LysR, Transcriptional regulator Transcription 28869536 Common pcaH protocatechuate 3,4-dioxygenase, beta subunit PSPTO_2338 51 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 28870857 Common - phosphate transporter family protein PSPTO_3702 157 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 28868073 Common hopAJ1 type III effector HopAJ1 PSPTO_0852 103 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 28871320 Common - hydrolase, alpha/beta fold family PSPTO_4178 47 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28869812 Common - transcriptional regulator, Sir2 family PSPTO_2622 145 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 28867830 Common - hypothetical protein PSPTO_0602 5 COG3152 COG3152, Predicted membrane protein Function unknown 28869189 Common - flagellar motor protein MotD PSPTO_1985 151 COG1360 MotB, Flagellar motor protein Cell motility and secretion 28867277 Common - ISPsy5, transposase PSPTO_0035 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867506 Pathogen - hypothetical protein PSPTO_0274 1 None None None 28867938 Common - hypothetical protein PSPTO_0710 4 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 28870924 Common - hypothetical protein PSPTO_3769 1 None None None 28870873 Common - ABC transporter, permease protein PSPTO_3718 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 28870565 Common - baseplate assembly protein W PSPTO_3401 37 COG3628 COG3628, Phage baseplate assembly protein W General function prediction only 28868044 Common - type IV pilus biogenesis protein PSPTO_0816 27 COG4968 PilE, Tfp pilus assembly protein PilE Cell motility and secretion / Intracellular trafficking and secretion 28871210 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_4067 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28869179 Common flhB flagellar biosynthesis protein FlhB PSPTO_1975 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 28871626 Common - hypothetical protein PSPTO_4492 173 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 28868711 Common - lipoprotein, putative PSPTO_1505 2 None None None 28869809 Pathogen - hypothetical protein PSPTO_2619 1 None None None 28870590 Common - hypothetical protein PSPTO_3426 1 None None None 28872285 Common - hypothetical protein PSPTO_5173 41 COG3758 COG3758, Uncharacterized protein conserved in bacteria Function unknown 28867518 Common - site-specific recombinase, phage integrase family PSPTO_0287 204 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28871762 Common - transcriptional regulator, PbsX family PSPTO_4630 13 COG3620 COG3620, Predicted transcriptional regulator with C-terminal CBS domains Transcription 28868045 Common - oxidoreductase, FAD-binding PSPTO_0817 154 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28869448 Common kdpE KDP operon transcriptional regulatory protein kdpE PSPTO_2246 212 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28869336 Common - extracytoplasmic-function sigma-70 factor PvdS PSPTO_2133 66 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28871752 Common - hypothetical protein PSPTO_4620 21 COG1993 COG1993, Uncharacterized conserved protein Function unknown 28869634 Common - acyl-CoA dehydrogenase family protein PSPTO_2439 78 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28872391 Common cadA-1 cadmium-translocating P-type ATPase PSPTO_5279 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 28872369 Common - hypothetical protein PSPTO_5257 4 None None None 28868312 Common - hypothetical protein PSPTO_1097 13 COG4097 COG4097, Predicted ferric reductase Inorganic ion transport and metabolism 28867445 Common - proteic killer protein, putative PSPTO_0213 56 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 28870960 Common - transcriptional regulator, AraC family PSPTO_3805 72 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28869070 Common - NADH:flavin oxidoreductase/NADH oxidase family protein PSPTO_1865 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28871490 Common - acyltransferase domain protein PSPTO_4354 120 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28867435 Common - hypothetical protein PSPTO_0201 26 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 28872529 Common - lipoprotein, putative PSPTO_5421 35 COG3521 COG3521, Uncharacterized protein conserved in bacteria Function unknown 28870356 Pathogen - hypothetical protein PSPTO_3187 1 None None None 28868964 Common - transcriptional regulator, TetR family PSPTO_1758 57 COG1309 AcrR, Transcriptional regulator Transcription 28871385 Common - urea amidolyase-related protein PSPTO_4243 235 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 28869095 Common pcD piperideine-6-carboxylate dehydrogenase PSPTO_1891 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28869321 Common - anti-anti-sigma factor, putative PSPTO_2118 7 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 28868953 Common pheA chorismate mutase/prephenate dehydratase PSPTO_1747 214 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 28872228 Common - gluconate transporter family protein PSPTO_5115 83 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 28868581 Common hrpW1 type III helper protein HrpW1 PSPTO_1373 13 None None None 28868194 Pathogen - hypothetical protein PSPTO_0974 1 None None None 28870044 Common - oxidoreductase, molybdopterin-binding subunit PSPTO_2862 66 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 28867580 Common - alkanesulfonate transporter substrate-binding subunit PSPTO_0350 106 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28870049 Common - TspO/MBR family protein PSPTO_2867 65 COG3476 COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) Signal transduction mechanisms 28871217 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_4074 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28869686 Common - glycosyl hydrolase, family 15 PSPTO_2493 70 COG3387 SGA1, Glucoamylase and related glycosyl hydrolases Carbohydrate transport and metabolism 28872380 Common znuA zinc ABC transporter, periplasmic zinc-binding protein PSPTO_5268 134 COG4531 ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 28870951 Common - GGDEF domain protein PSPTO_3796 176 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28871158 Pathogen - hypothetical protein PSPTO_4015 1 None None None 28868035 Common lspA lipoprotein signal peptidase PSPTO_0807 131 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28869858 Common - mutT/nudix family protein PSPTO_2670 141 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 28870074 Common - hypothetical protein PSPTO_2895 14 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 28871728 Common - ISPssy, transposase PSPTO_4596 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868331 Common cfa cyclopropane-fatty-acyl-phospholipid synthase PSPTO_1116 124 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 28869982 Common - hypothetical protein PSPTO_2796 43 COG3665 COG3665, Uncharacterized conserved protein Function unknown 28867856 Common rplW 50S ribosomal protein L23 PSPTO_0628 216 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 28868327 Common murI glutamate racemase PSPTO_1112 190 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 28867955 Common eutB ethanolamine ammonia-lyase, heavy subunit PSPTO_0727 55 COG4303 EutB, Ethanolamine ammonia-lyase, large subunit Amino acid transport and metabolism 28870751 Common rarD-2 rarD protein PSPTO_3591 94 COG2962 RarD, Predicted permeases General function prediction only 28867378 Common - ABC transporter, ATP-binding protein PSPTO_0138 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 28870552 Common - DNA adenine methylase, putative PSPTO_3388 86 COG0338 Dam, Site-specific DNA methylase DNA replication, recombination, and repair 28871821 Pathogen hopAD1 type III effector HopAD1 PSPTO_4691 2 None None None 28868272 Pathogen - hypothetical protein PSPTO_1055 1 None None None 28869203 Common - PIN domain protein PSPTO_1999 57 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 28871078 Pathogen - hypothetical protein PSPTO_3927 1 None None None 28867554 Common argE-2 acetylornithine deacetylase PSPTO_0323 197 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28868353 Common - lipoprotein, putative PSPTO_1138 4 COG3056 COG3056, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 28868771 Common rpoS RNA polymerase sigma factor RpoS PSPTO_1565 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 28868970 Common - hypothetical protein PSPTO_1764 23 COG4394 COG4394, Uncharacterized protein conserved in bacteria Function unknown 28869988 Common proP proline/betaine transporter PSPTO_2802 166 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28871600 Common tldD tldD protein PSPTO_4465 170 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 28870333 Common - hypothetical protein PSPTO_3162 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 28867485 Common - hypothetical protein PSPTO_0253 13 COG1034 NuoG, NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) Energy production and conversion 28872416 Common - ISPsy5, transposase PSPTO_5304 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871208 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_4065 236 COG3967 DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 28872704 Common atpB F0F1 ATP synthase subunit A PSPTO_5605 201 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 28868817 Pathogen - hypothetical protein PSPTO_1611 1 None None None 28869050 Common - hypothetical protein PSPTO_1845 1 None None None 28871023 Common - patatin family protein PSPTO_3870 79 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 28867888 Common - glycerophosphoryl diester phosphodiesterase, putative PSPTO_0660 168 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 28867881 Common - bacterioferritin PSPTO_0653 102 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 28870101 Common - acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative PSPTO_2922 175 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 28869049 Common csrA-2 carbon storage regulator PSPTO_1844 76 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 28872622 Common - hypothetical protein PSPTO_5517 33 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 28871775 Common - ISPssy, transposase PSPTO_4643 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868475 Common nrdH glutaredoxin NrdH PSPTO_1264 18 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 28870510 Common - crcB family protein PSPTO_3346 182 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 28870008 Common - hypothetical protein PSPTO_2823 4 COG3239 DesA, Fatty acid desaturase Lipid metabolism 28867931 Common - putative glutathione S-transferase YghU PSPTO_0703 97 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28869454 Pathogen - hypothetical protein PSPTO_2253 1 None None None 28872554 Common - hypothetical protein PSPTO_5448 11 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28872108 Common - ISPsy5, transposase PSPTO_4994 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869754 Common phnK phosphonates transport ATP-binding protein PSPTO_2563 248 COG4107 PhnK, ABC-type phosphonate transport system, ATPase component Inorganic ion transport and metabolism 28871956 Common - translation initiation factor Sui1 PSPTO_4841 86 COG0023 SUI1, Translation initiation factor 1 (eIF-1/SUI1) and related proteins Translation, ribosomal structure and biogenesis 28869470 Common - ErfK/YbiS/YcfS/YnhG family protein PSPTO_2270 91 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 28869361 Common - outer membrane efflux protein PSPTO_2158 108 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28868366 Common - transcriptional regulator, LuxR family PSPTO_1151 103 COG2909 MalT, ATP-dependent transcriptional regulator Transcription 28868171 Common - ampE protein PSPTO_0951 8 COG3725 AmpE, Membrane protein required for beta-lactamase induction Defense mechanisms 28870519 Common - cold shock domain family protein PSPTO_3355 177 COG1278 CspC, Cold shock proteins Transcription 28870778 Common - HlyD family secretion protein PSPTO_3620 149 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 28867399 Common trpA tryptophan synthase subunit alpha PSPTO_0159 217 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 28868250 Common wssH cellulose acetylase, subunit WssH PSPTO_1033 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 28868556 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_1348 193 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28869556 Common allD ureidoglycolate dehydrogenase PSPTO_2359 67 COG2055 COG2055, Malate/L-lactate dehydrogenases Energy production and conversion 28872100 Common - hypothetical protein PSPTO_4986 2 None None None 28868013 Common - sensor histidine kinase PSPTO_0785 206 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871641 Common recN DNA repair protein RecN PSPTO_4507 203 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 28870068 Pathogen - hypothetical protein PSPTO_2889 1 None None None 28871466 Common - ISPs1, transposase OrfA PSPTO_4329 77 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868929 Pathogen - hypothetical protein PSPTO_1723 1 None None None 28868595 Pathogen hrpF type III secretion protein HrpF PSPTO_1387 1 None None None 28867837 Common tyrS tyrosyl-tRNA synthetase PSPTO_0609 239 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28869739 Common - clpB protein, putative PSPTO_2548 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 28868742 Common pyrH uridylate kinase PSPTO_1536 235 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 28871759 Common - hypothetical protein PSPTO_4627 6 COG2810 COG2810, Predicted type IV restriction endonuclease Defense mechanisms 28871338 Common gcd glucose dehydrogenase PSPTO_4196 58 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 28871018 Common - hypothetical protein PSPTO_3865 3 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28867346 Common cycB cytochrome c5 PSPTO_0106 42 COG3245 CycB, Cytochrome c5 Energy production and conversion 28869532 Common - hypothetical protein PSPTO_2334 25 COG4575 ElaB, Uncharacterized conserved protein Function unknown 28869700 Common - hypothetical protein PSPTO_2507 100 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28868183 Common pcnB poly(A) polymerase PSPTO_0963 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 28868692 Common - hypothetical protein PSPTO_1485 1 None None None 28872063 Common - hypothetical protein PSPTO_4949 133 COG2860 COG2860, Predicted membrane protein Function unknown 28869394 Common - hypothetical protein PSPTO_2192 36 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 28867310 Common - hypothetical protein PSPTO_0070 107 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28868479 Common valS valyl-tRNA synthetase PSPTO_1268 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28871141 Common - ISPsy5, transposase PSPTO_3996 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869366 Common aspC aromatic amino acid aminotransferase PSPTO_2163 72 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28867338 Common - hypothetical protein PSPTO_0098 120 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28869194 Common apt adenine phosphoribosyltransferase PSPTO_1990 186 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 28872386 Common hutH-2 histidine ammonia-lyase PSPTO_5274 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 28868255 Common - hypothetical protein PSPTO_1038 27 COG5642 COG5642, Uncharacterized conserved protein Function unknown 28867771 Common folK-1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase PSPTO_0543 122 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 28868027 Common obgE GTPase ObgE PSPTO_0799 249 COG0536 Obg, Predicted GTPase General function prediction only 28870367 Common - bacterial luciferase family protein PSPTO_3198 64 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28872235 Pathogen - hypothetical protein PSPTO_5122 1 None None None 28870770 Common - hypothetical protein PSPTO_3610 6 None None None 28870314 Common uppP undecaprenyl pyrophosphate phosphatase PSPTO_3141 199 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 28871156 Common - ISPsy4, transposase PSPTO_4013 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867745 Common - ISPsy8, transposase OrfB PSPTO_0516 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869116 Common - sensor histidine kinase PSPTO_1912 114 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28867697 Pathogen - hypothetical protein PSPTO_0467 1 None None None 28870739 Common - hypothetical protein PSPTO_3579 64 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 28867690 Common soxB-1 sarcosine oxidase, beta subunit PSPTO_0460 122 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28868291 Common - O-antigen ABC transporter, permease protein, putative PSPTO_1076 99 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 28869789 Common irp3 yersiniabactin synthetase, thiazolinyl reductase component PSPTO_2599 15 COG4693 PchG, Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28871693 Common - dipeptide ABC transporter, periplasmic dipeptide-binding protein PSPTO_4559 208 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28870036 Common - TonB-dependent receptor, putative PSPTO_2853 114 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28869529 Common - deoxyguanosinetriphosphate triphosphohydrolase-like protein PSPTO_2331 159 COG0232 Dgt, dGTP triphosphohydrolase Nucleotide transport and metabolism 28872186 Pathogen - hypothetical protein PSPTO_5073 1 None None None 28867925 Common - hypothetical protein PSPTO_0697 1 None None None 28869121 Common - major facilitator family transporter PSPTO_1917 160 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869590 Common - radical SAM domain protein PSPTO_2394 8 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 28870375 Common - transcriptional regulator, LysR family PSPTO_3207 144 COG0583 LysR, Transcriptional regulator Transcription 28870297 Common - acetyltransferase, GNAT family PSPTO_3124 46 COG0456 RimI, Acetyltransferases General function prediction only 28869407 Common - hypothetical protein PSPTO_2205 9 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 28871005 Common - hypothetical protein PSPTO_3852 2 None None None 28869847 Common - NAD(P)H-flavin oxidoreductase PSPTO_2659 52 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 28869774 Common - hypothetical protein PSPTO_2584 61 COG0070 GltB, Glutamate synthase domain 3 Amino acid transport and metabolism 28867574 Common engB GTPase EngB PSPTO_0343 172 COG0218 COG0218, Predicted GTPase General function prediction only 28872175 Common - putative aldolase PSPTO_5062 142 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 28871742 Common - hypothetical protein PSPTO_4610 37 COG4315 COG4315, Uncharacterized protein conserved in bacteria Function unknown 28867565 Common algB alginate biosynthesis transcriptional regulatory protein AlgB PSPTO_0334 219 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28871172 Common - hypothetical protein PSPTO_4029 35 COG3148 COG3148, Uncharacterized conserved protein Function unknown 28870281 Common ahpC alkyl hydroperoxide reductase, subunit C PSPTO_3108 219 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 28870741 Common - acetyltransferase, GNAT family PSPTO_3581 1 COG0456 RimI, Acetyltransferases General function prediction only 28871749 Pathogen - hypothetical protein PSPTO_4617 1 None None None 28869411 Common - dienelactone hydrolase family protein PSPTO_2209 91 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 28871082 Common - hypothetical protein PSPTO_3932 2 None None None 28869057 Common - mechanosensitive ion channel family protein PSPTO_1852 219 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28871985 Pathogen - hypothetical protein PSPTO_4870 1 None None None 28868855 Common - autotransporter, putative PSPTO_1649 134 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 28868977 Common - hypothetical protein PSPTO_1771 2 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 28872542 Common - hypothetical protein PSPTO_5434 23 COG3515 COG3515, Uncharacterized protein conserved in bacteria Function unknown 28868574 Pathogen - hypothetical protein PSPTO_1366 1 None None None 28871239 Common fadD-1 acyl-CoA synthetase PSPTO_4097 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28872041 Common - hypothetical protein PSPTO_4927 1 None None None 28869704 Common - methyl-accepting chemotaxis protein PSPTO_2511 155 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871284 Common - hypothetical protein PSPTO_4142 52 COG1407 COG1407, Predicted ICC-like phosphoesterases General function prediction only 28868677 Common - CBS domain protein PSPTO_1470 217 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 28871619 Common - hypothetical protein PSPTO_4484 4 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 28870186 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_3008 111 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869560 Pathogen - hypothetical protein PSPTO_2363 1 None None None 28868458 Common moaC molybdenum cofactor biosynthesis protein C PSPTO_1247 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 28872425 Common - molybdenum-pterin binding domain protein PSPTO_5313 44 COG3585 MopI, Molybdopterin-binding protein Coenzyme metabolism 28869430 Common fimD outer membrane usher protein fimD PSPTO_2228 36 COG3188 FimD, P pilus assembly protein, porin PapC Cell motility and secretion / Intracellular trafficking and secretion 28870903 Common - multidrug resistance protein PSPTO_3748 150 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 28867589 Common glnA-1 glutamine synthetase, type I PSPTO_0359 226 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 28869239 Common folE GTP cyclohydrolase I PSPTO_2035 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 28870935 Common - glutathionylspermidine synthase family protein PSPTO_3780 54 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 28871306 Common argF ornithine carbamoyltransferase PSPTO_4164 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 28872411 Common - hypothetical protein PSPTO_5299 34 COG2267 PldB, Lysophospholipase Lipid metabolism 28867868 Common rpsH 30S ribosomal protein S8 PSPTO_0640 234 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 28867603 Common - Rhs family protein PSPTO_0373 60 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28870732 Common - hypothetical protein PSPTO_3572 96 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 28870658 Common mmsA-3 methylmalonate-semialdehyde dehydrogenase PSPTO_3497 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28868820 Pathogen - hypothetical protein PSPTO_1614 1 None None None 28870988 Common plsX fatty acid/phospholipid synthesis protein PSPTO_3834 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 28868725 Common - hypothetical protein PSPTO_1519 24 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 28870198 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PSPTO_3022 196 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 28869108 Common - hypothetical protein PSPTO_1904 5 None None None 28867821 Common trpD anthranilate phosphoribosyltransferase PSPTO_0593 217 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 28869712 Common - oxidoreductase, FAD-binding PSPTO_2519 44 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28869112 Common pobR transcriptional regulator PobR PSPTO_1908 87 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28870146 Common - alcohol dehydrogenase, zinc-containing PSPTO_2968 151 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28872046 Common rpsR 30S ribosomal protein S18 PSPTO_4932 213 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 28867805 Common - tail sheath protein, putative PSPTO_0577 21 COG4386 COG4386, Mu-like prophage tail sheath protein gpL General function prediction only 28870659 Common - iolB protein PSPTO_3498 51 COG3718 IolB, Uncharacterized enzyme involved in inositol metabolism Carbohydrate transport and metabolism 28871921 Common - hypothetical protein PSPTO_4806 196 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 28870787 Common ccmF cytochrome c-type biogenesis protein CcmF PSPTO_3630 121 COG1138 CcmF, Cytochrome c biogenesis factor Posttranslational modification, protein turnover, chaperones 28872455 Common - hypothetical protein PSPTO_5343 72 COG2924 COG2924, Uncharacterized protein conserved in bacteria Function unknown 28872520 Common - ISPsy5, Orf1 PSPTO_5412 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868747 Common - membrane-associated zinc metalloprotease, putative PSPTO_1541 211 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 28871232 Common ppiA peptidyl-prolyl cis-trans isomerase A PSPTO_4090 197 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 28870440 Pathogen - hypothetical protein PSPTO_3276 1 None None None 28868205 Common - putative sulfite oxidase subunit YedY PSPTO_0985 118 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 28869769 Common - hypothetical protein PSPTO_2578 75 COG1469 COG1469, Uncharacterized conserved protein Function unknown 28868998 Common - rhodanese-like domain protein PSPTO_1792 50 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 28872111 Common - hypothetical protein PSPTO_4997 6 None None None 28867593 Common polS sorbitol dehydrogenase PSPTO_0363 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28869271 Pathogen - hypothetical protein PSPTO_2067 1 None None None 28871442 Common - outer membrane efflux protein PSPTO_4305 132 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28870057 Common - ABC transporter, ATP-binding protein PSPTO_2875 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 28867768 Common gcp O-sialoglycoprotein endopeptidase PSPTO_0540 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 28869943 Common - GGDEF domain/EAL domain protein PSPTO_2757 174 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28869293 Common - host specificity protein J, internal deletion PSPTO_2089 18 COG4733 COG4733, Phage-related protein, tail component Function unknown 28868829 Common - hypothetical protein PSPTO_1623 51 COG3162 COG3162, Predicted membrane protein Function unknown 28867495 Common - methyl-accepting chemotaxis protein PSPTO_0263 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28867456 Common dapF diaminopimelate epimerase PSPTO_0224 203 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 28870532 Common nuoE NADH dehydrogenase subunit E PSPTO_3368 157 COG1905 NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit Energy production and conversion 28869819 Common - amino acid ABC transporter, ATP-binding protein PSPTO_2630 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28868611 Pathogen hrpJ type III secretion protein HrpJ PSPTO_1403 3 COG5114 COG5114, Histone acetyltransferase complex SAGA/ADA, subunit ADA2 Chromatin structure and dynamics 28871683 Common - 5-dehydro-4-deoxyglucarate dehydratase PSPTO_4549 225 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 28870234 Common - glycine betaine/L-proline ABC transporter, permease protein PSPTO_3059 189 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 28869842 Common - 4Fe-4S binding domain protein PSPTO_2654 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 28868545 Common - oxidoreductase, zinc-binding PSPTO_1337 199 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28869915 Common - predicted inner membrane peptidase PSPTO_2728 189 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 28868938 Common - hypothetical protein PSPTO_1732 14 COG3184 COG3184, Uncharacterized protein conserved in bacteria Function unknown 28869948 Common glgB glycogen branching enzyme PSPTO_2762 143 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 28868454 Common algD GDP-mannose 6-dehydrogenase AlgD PSPTO_1243 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 28867465 Common gltP glutamate/aspartate:proton symporter PSPTO_0233 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 28867987 Common - bmp family protein PSPTO_0759 102 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 28870289 Common - hypothetical protein PSPTO_3116 3 None None None 28870523 Common - hypothetical protein PSPTO_3359 41 COG2915 COG2915, Uncharacterized protein involved in purine metabolism General function prediction only 28871226 Common - hypothetical protein PSPTO_4083 23 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 28868802 Common - hypothetical protein PSPTO_1596 21 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 28867716 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_0486 88 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 28869165 Common fliI flagellum-specific ATP synthase PSPTO_1961 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 28870013 Common syrR transcriptional regulator SyrR PSPTO_2828 2 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28871364 Common mucB sigma factor algU regulatory protein MucB PSPTO_4222 48 COG3026 RseB, Negative regulator of sigma E activity Signal transduction mechanisms 28872491 Common - phosphoglycerate mutase family protein PSPTO_5383 17 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 28870248 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_3073 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868752 Common lpxA UDP-N-acetylglucosamine acyltransferase PSPTO_1546 162 COG1043 LpxA, Acyl- acyl carrier protein 28870247 Common - transcriptional regulator, AraC family PSPTO_3072 62 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28869655 Common - ISPsy5, Orf1 PSPTO_2461 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872695 Common - transcriptional regulator, DeoR family PSPTO_5596 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 28868162 Common terB tellurium resistance protein TerB PSPTO_0942 16 COG3793 TerB, Tellurite resistance protein Inorganic ion transport and metabolism 28868279 Common - hypothetical protein PSPTO_1062 2 None None None 28870267 Common - hypothetical protein PSPTO_3092 22 COG4798 COG4798, Predicted methyltransferase General function prediction only 28871538 Common ftsZ cell division protein FtsZ PSPTO_4403 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 28869862 Common - 3-oxoadipate enol-lactone hydrolase family protein PSPTO_2674 191 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28869246 Common - hypothetical protein PSPTO_2042 31 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 28870097 Common - hypothetical protein PSPTO_2918 16 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 28867379 Common - hypothetical protein PSPTO_0139 10 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28868703 Common - CheW domain protein PSPTO_1496 6 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28869396 Common gltA type II citrate synthase PSPTO_2194 194 COG0372 GltA, Citrate synthase Energy production and conversion 28871960 Common - lipoprotein, putative PSPTO_4845 79 COG2373 COG2373, Large extracellular alpha-helical protein General function prediction only 28870121 Pathogen - hypothetical protein PSPTO_2942 1 None None None 28869328 Common - hypothetical protein PSPTO_2125 1 None None None 28870981 Common tmk thymidylate kinase PSPTO_3827 229 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 28871421 Common - acetyltransferase, GNAT family PSPTO_4284 3 COG2153 ElaA, Predicted acyltransferase General function prediction only 28872271 Common - methyl-accepting chemotaxis protein PSPTO_5159 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871351 Common - hypothetical protein PSPTO_4209 21 COG3794 PetE, Plastocyanin Energy production and conversion 28867272 Common - hypothetical protein PSPTO_0030 10 None None None 28870709 Common - hypothetical protein PSPTO_3548 82 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 28871676 Common - GAF domain protein PSPTO_4542 11 None None None 28869723 Pathogen - hypothetical protein PSPTO_2530 1 None None None 28867870 Common rplR 50S ribosomal protein L18 PSPTO_0642 215 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 28870822 Common - hypothetical protein PSPTO_3667 46 COG3195 COG3195, Uncharacterized protein conserved in bacteria Function unknown 28868945 Common - GGDEF domain protein PSPTO_1739 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28869314 Common lolE lipoprotein releasing system transmembrane protein LolE PSPTO_2111 180 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 28871000 Common - MotA/TolQ/ExbB proton channel family protein PSPTO_3847 154 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28872083 Common - hypothetical protein PSPTO_4969 4 None None None 28870208 Common - peptide ABC transporter, ATP-binding protein, putative PSPTO_3032 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 28869542 Common - hypothetical protein PSPTO_2344 80 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 28870978 Common - deoxyribonuclease, TatD family PSPTO_3824 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 28870841 Common - carbohydrate transporter, putative PSPTO_3686 105 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28868665 Common - periplasmic binding domain/transglycosylase SLT domain fusion protein PSPTO_1458 116 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 28871531 Common - ATP:cob(I)alamin adenosyltransferase, putative PSPTO_4396 127 COG2096 COG2096, Uncharacterized conserved protein Function unknown 28867453 Common - HAD-superfamily hydrolase PSPTO_0221 152 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 28871248 Common - GGDEF domain/EAL domain protein PSPTO_4106 179 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28871854 Common - hypothetical protein PSPTO_4734 5 None None None 28868482 Common pepA leucyl aminopeptidase PSPTO_1271 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 28872674 Common - methyl-accepting chemotaxis protein PSPTO_5569 155 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870431 Common pstA phosphate ABC transporter, permease protein PSPTO_3267 221 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 28871607 Common mreB rod shape-determining protein MreB PSPTO_4472 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 28871444 Common catF beta-ketoadipyl CoA thiolase PSPTO_4307 179 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 28868920 Common cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase PSPTO_1714 129 COG2087 CobU, Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Coenzyme metabolism 28870702 Common - C4-dicarboxylate transporter/malic acid transport protein PSPTO_3541 22 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 28871505 Common - lipoprotein, putative PSPTO_4369 24 COG3490 COG3490, Uncharacterized protein conserved in bacteria Function unknown 28869767 Common - peptide ABC transporter, periplasmic peptide-binding protein PSPTO_2576 209 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28872663 Common - hypothetical protein PSPTO_5558 9 None None None 28871111 Pathogen - hypothetical protein PSPTO_3965 1 None None None 28870763 Common - DNA-binding heavy metal response regulator PSPTO_3603 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28872573 Common - hypothetical protein PSPTO_5468 2 None None None 28872068 Common - hypothetical protein PSPTO_4954 2 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 28870621 Common - 2-hydroxyacid dehydrogenase PSPTO_3460 230 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 28869487 Common prpB 2-methylisocitrate lyase PSPTO_2287 115 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 28867704 Pathogen hopAS1 type III effector HopAS1 PSPTO_0474 1 None None None 28871224 Common - Rhs family protein PSPTO_4081 63 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28872516 Pathogen - hypothetical protein PSPTO_5408 1 None None None 28872430 Common - outer membrane porin, OprD family PSPTO_5318 9 None None None 28871638 Common dnaJ dnaJ protein PSPTO_4504 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 28867424 Common glyQ glycyl-tRNA synthetase subunit alpha PSPTO_0184 167 COG0752 GlyQ, Glycyl-tRNA synthetase, alpha subunit Translation, ribosomal structure and biogenesis 28872113 Common - lipopolysaccharide core biosynthesis protein, putative PSPTO_4999 2 None None None 28867261 Common - ISPsy4, transposase PSPTO_0019 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872122 Common - hypothetical protein PSPTO_5008 143 COG2081 COG2081, Predicted flavoproteins General function prediction only 28868319 Common prsA ribose-phosphate pyrophosphokinase PSPTO_1104 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 28867515 Common - hypothetical protein PSPTO_0283 1 None None None 28868679 Common ffh signal recognition particle protein Ffh PSPTO_1472 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 28872018 Common - DNA-binding transcriptional activator PSPTO_4903 11 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 28867527 Common - hypothetical protein PSPTO_0296 1 None None None 28870022 Common - hypothetical protein PSPTO_2838 4 None None None 28871428 Common - sensor histidine kinase PSPTO_4291 218 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28871257 Common - lipoprotein SlyB, putative PSPTO_4115 20 COG3133 SlyB, Outer membrane lipoprotein Cell envelope biogenesis, outer membrane 28870155 Common - hypothetical protein PSPTO_2977 8 None None None 28868628 Common cysE serine O-acetyltransferase PSPTO_1421 193 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 28869418 Common - 4-hydroxybenzoyl-CoA thioesterase domain protein PSPTO_2216 79 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 28869493 Common - esterase/lipase/thioesterase family protein PSPTO_2293 14 COG2267 PldB, Lysophospholipase Lipid metabolism 28868879 Common - sensor histidine kinase PSPTO_1673 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869380 Common dgoK 2-dehydro-3-deoxygalactonate kinase PSPTO_2177 41 COG3734 DgoK, 2-keto-3-deoxy-galactonokinase Carbohydrate transport and metabolism 28868672 Common - bacterial transferase, hexapeptide repeat protein PSPTO_1465 202 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 28872613 Common - ISPsy8, transposase OrfA PSPTO_5508 20 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871272 Common - hypothetical protein PSPTO_4130 8 COG5608 COG5608, Conserved secreted protein Function unknown 28872400 Common ilvA-2 threonine dehydratase PSPTO_5288 220 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 28870673 Common - hypothetical protein PSPTO_3512 3 None None None 28872396 Common ptsP phosphoenolpyruvate-protein phosphotransferase PtsP PSPTO_5284 235 COG3605 PtsP, Signal transduction protein containing GAF and PtsI domains Signal transduction mechanisms 28872157 Common - hypothetical protein PSPTO_5043 22 COG2314 XynA, Predicted membrane protein Function unknown 28871648 Common - sodium-dependent transporter, putative PSPTO_4514 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 28867649 Common - transcriptional reguator, TetR family PSPTO_0419 42 COG1309 AcrR, Transcriptional regulator Transcription 28869081 Common - ISPsy11, transposase OrfA PSPTO_1877 9 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870265 Common - nickel ABC transporter, permease protein, putative PSPTO_3090 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28867800 Pathogen - bacteriocin, putative PSPTO_0572 2 None None None 28870458 Common - TonB-dependent siderophore receptor, putative PSPTO_3294 116 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 28872166 Common - coproporphyrinogen III oxidase PSPTO_5052 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 28867692 Common - glycine/betaine/L-proline ABC transporter, ATP-binding subunit PSPTO_0462 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 28870983 Common pabC 4-amino-4-deoxychorismate lyase PSPTO_3829 181 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 28872024 Common ureF-2 urease accessory protein UreF PSPTO_4910 71 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 28867498 Common - peptide ABC transporter, permease protein PSPTO_0266 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 28867571 Common - endonuclease/exonuclease/phosphatase family protein PSPTO_0340 37 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 28869909 Common - oxidoreductase, Gfo/Idh/MocA family PSPTO_2722 144 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 28867358 Common - Na/Pi cotransporter family protein PSPTO_0118 79 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 28872500 Pathogen - hypothetical protein PSPTO_5392 1 None None None 28868840 Common - hypothetical protein PSPTO_1634 36 COG1724 COG1724, Predicted periplasmic or secreted lipoprotein Cell motility and secretion 28870348 Common - hypothetical protein PSPTO_3177 3 None None None 28871842 Pathogen hopAA1-2 type III effector HopAA1-2 PSPTO_4718 2 None None None 28870644 Common - hypothetical protein PSPTO_3483 1 None None None 28868642 Common hisS histidyl-tRNA synthetase PSPTO_1435 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28868535 Common cyoC cytochrome o ubiquinol oxidase, subunit III PSPTO_1327 159 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 28867876 Common rpsM 30S ribosomal protein S13 PSPTO_0648 247 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 28870619 Common - hypothetical protein PSPTO_3458 33 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 28868145 Common pilC type IV pilus biogenesis protein PilC PSPTO_0925 149 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 28871179 Common - hypothetical protein PSPTO_4036 2 None None None 28868601 Common hrcT type III secretion protein HrcT PSPTO_1393 23 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 28869167 Common - STAS domain protein PSPTO_1963 12 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 28869489 Common - aconitate hydratase PSPTO_2289 223 COG1048 AcnA, Aconitase A Energy production and conversion 28868983 Common tpm thiopurine S-methyltransferase PSPTO_1777 31 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase Coenzyme metabolism 28869997 Common - peptide ABC transporter, permease protein PSPTO_2811 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28868562 Common - isochorismatase family protein PSPTO_1354 120 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28871382 Common - ABC transporter, ATP-binding protein PSPTO_4240 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 28871940 Common - penicillin-binding protein PSPTO_4825 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 28871828 Common - ISPssy, transposase PSPTO_4702 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867798 Common - transcriptional regulator PrtN, putative PSPTO_0570 1 None None None 28870138 Common - pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase family protein PSPTO_2960 225 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 28870278 Common - hypothetical protein PSPTO_3105 1 None None None 28867364 Common - ISPsy8, transposase OrfB PSPTO_0124 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872650 Common - hypothetical protein PSPTO_5545 3 None None None 28869924 Common - gamma-carboxygeranoyl-CoA hydratase PSPTO_2737 177 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 28869874 Common - hypothetical protein PSPTO_2686 41 COG3132 COG3132, Uncharacterized protein conserved in bacteria Function unknown 28867259 Common - helicase/SNF2 family domain protein PSPTO_0017 178 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 28869317 Common - hypothetical protein PSPTO_2114 17 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 28871763 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_4631 195 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28871501 Common - GGDEF domain/EAL domain protein PSPTO_4365 166 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28869156 Common fliS flagellar protein FliS PSPTO_1952 69 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 28871362 Common lepA GTP-binding protein LepA PSPTO_4220 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 28870173 Common - ribose ABC transporter, ATP-binding protein, putative PSPTO_2995 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 28869970 Common - hypothetical protein PSPTO_2784 1 None None None 28870406 Common - phytase domain protein PSPTO_3241 19 COG4247 Phy, 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) Lipid metabolism 28870930 Pathogen - hypothetical protein PSPTO_3775 1 None None None 28871630 Common folP dihydropteroate synthase PSPTO_4496 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 28869990 Common - transcriptional regulator, LysR family PSPTO_2804 172 COG0583 LysR, Transcriptional regulator Transcription 28870052 Common - hypothetical protein PSPTO_2870 10 COG5373 COG5373, Predicted membrane protein Function unknown 28868892 Common wrbA trp repressor binding protein PSPTO_1686 115 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 28871201 Common mutS DNA mismatch repair protein PSPTO_4058 202 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 28870469 Pathogen - hypothetical protein PSPTO_3305 1 COG2252 COG2252, Permeases General function prediction only 28868415 Common - hypothetical protein PSPTO_1202 1 None None None 28870504 Common - DsrH family protein PSPTO_3340 5 COG2168 DsrH, Uncharacterized conserved protein involved in oxidation of intracellular sulfur Inorganic ion transport and metabolism 28872004 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_4889 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28870896 Common - sigma-54 dependent transcriptional regulator PSPTO_3741 178 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 28869301 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSPTO_2097 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28872212 Common hutH-1 histidine ammonia-lyase PSPTO_5099 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 28871369 Common - hypothetical protein PSPTO_4227 42 COG2938 COG2938, Uncharacterized conserved protein Function unknown 28871834 Common cmaA coronamic acid synthetase, alloisoleucine ligase component PSPTO_4709 217 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28871124 Common ruvC Holliday junction resolvase PSPTO_3979 196 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 28869507 Common - hypothetical protein PSPTO_2307 85 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28868790 Common - alcohol dehydrogenase, zinc-containing PSPTO_1584 174 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28867615 Common tkt transketolase PSPTO_0385 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 28867687 Common soxG-1 sarcosine oxidase, gamma subunit PSPTO_0457 29 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 28867816 Pathogen hopH1 type III effector HopH1 PSPTO_0588 4 None None None 28870455 Common - methyl-accepting chemotaxis protein PSPTO_3291 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869186 Common cheA-2 chemotaxis sensor histidine kinase CheA PSPTO_1982 150 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 28870580 Common - holin PSPTO_3416 7 None None None 28869746 Common phnC phosphonates ABC transporter, ATP-binding protein PSPTO_2555 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 28867503 Common - tonB protein, putative PSPTO_0271 39 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28869977 Common - oxidoreductase, aldo/keto reductase family PSPTO_2791 204 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28869323 Common - glutamate carboxypeptidase PSPTO_2120 150 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28867699 Common - hypothetical protein PSPTO_0469 2 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 28871577 Common - toluene tolerance protein, putative PSPTO_4442 44 COG5007 COG5007, Predicted transcriptional regulator, BolA superfamily Transcription 28871527 Common - mechanosensitive ion channel family protein PSPTO_4392 198 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28872601 Pathogen - hypothetical protein PSPTO_5496 1 None None None 28869214 Common - ISPssy, transposase PSPTO_2010 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872318 Pathogen - EF hand domain protein PSPTO_5206 8 COG1527 NtpC, Archaeal/vacuolar-type H+-ATPase subunit C Energy production and conversion 28872136 Common - hypothetical protein PSPTO_5022 1 COG3774 OCH1, Mannosyltransferase OCH1 and related enzymes Cell envelope biogenesis, outer membrane 28867327 Common - bacterial extracellular solute-binding protein, family 5 PSPTO_0087 193 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28871353 Common - lipoprotein, putative PSPTO_4211 13 COG5513 COG5513, Predicted secreted protein Function unknown 28867374 Common algQ anti-RNA polymerase sigma 70 factor PSPTO_0134 24 COG3160 Rsd, Regulator of sigma D Transcription 28872377 Common znuB zinc ABC transporter, permease protein PSPTO_5265 168 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 28867547 Common gcvT glycine cleavage system aminomethyltransferase T PSPTO_0316 178 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 162533079 Common - putative SAM-dependent methyltransferase PSPTO_1267 28 COG3129 COG3129, Predicted SAM-dependent methyltransferase General function prediction only 28871664 Common katG catalase/peroxidase HPI PSPTO_4530 98 COG0376 KatG, Catalase (peroxidase I) Inorganic ion transport and metabolism 28870027 Common - hypothetical protein PSPTO_2843 1 None None None 28869829 Common araH L-arabinose transporter permease protein PSPTO_2640 113 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 28870941 Common - PspA/IM30 family protein PSPTO_3786 36 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 28869085 Common - aldehyde dehydrogenase family protein PSPTO_1881 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28867531 Common gabD succinate-semialdehyde dehydrogenase I PSPTO_0300 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28870462 Common - sensor histidine kinase PSPTO_3298 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871293 Common - DNA-binding response regulator, LuxR family PSPTO_4151 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28870316 Common - nicotinamide-nucleotide adenylyltransferase, putative PSPTO_3143 17 COG3172 NadR, Predicted ATPase/kinase involved in NAD metabolism Coenzyme metabolism 28870487 Common - aldehyde dehydrogenase family protein PSPTO_3323 153 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28868788 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_1582 237 COG3967 DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 28871184 Common - host specificity protein J, internal deletion PSPTO_4041 19 COG4733 COG4733, Phage-related protein, tail component Function unknown 28868849 Common - hypothetical protein PSPTO_1643 14 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 28872608 Common - YeeE/YedE family protein PSPTO_5503 53 COG2391 COG2391, Predicted transporter component General function prediction only 28869451 Common - hypothetical protein PSPTO_2249 46 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 28871945 Common - 3-methyladenine DNA glycosylase PSPTO_4830 51 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 28867381 Common - lead uptake protein, putative PSPTO_0141 57 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 28868247 Common wssE cellulose synthase operon protein C PSPTO_1030 81 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 28871483 Common - ISPssy, transposase PSPTO_4347 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28871314 Common - amino acid ABC transporter, permease protein PSPTO_4172 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28868005 Common recB exodeoxyribonuclease V, beta subunit PSPTO_0777 204 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 28868301 Common hsdM type I restriction-modification system, M subunit PSPTO_1086 160 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 28869306 Common gap-2 glyceraldehyde-3-phosphate dehydrogenase PSPTO_2102 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 28870816 Common - xanthine dehydrogenase, C-terminal subunit PSPTO_3661 107 COG4631 XdhB, Xanthine dehydrogenase, molybdopterin-binding subunit B Nucleotide transport and metabolism 28871758 Common - transposase/IS protein PSPTO_4626 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28870083 Common vanA vanillate O-demethylase, oxygenase subunit PSPTO_2904 69 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 28868102 Pathogen - hypothetical protein PSPTO_0882 1 None None None 28870574 Common - portal protein PSPTO_3410 38 COG5511 COG5511, Bacteriophage capsid protein General function prediction only 28870539 Common nuoL NADH dehydrogenase subunit L PSPTO_3375 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 28870494 Common tliD ABC transporter, ATP-binding protein PSPTO_3330 249 COG4618 ArpD, ABC-type protease/lipase transport system, ATPase and permease components General function prediction only 28867967 Common - lipoprotein, putative PSPTO_0739 2 None None None 28867633 Common - hypothetical protein PSPTO_0403 2 None None None 28869935 Common - hypothetical protein PSPTO_2748 9 COG0456 RimI, Acetyltransferases General function prediction only 28870937 Common - hypothetical protein PSPTO_3782 12 COG3766 COG3766, Predicted membrane protein Function unknown 28871547 Common murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase PSPTO_4412 209 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 28870394 Pathogen - hypothetical protein PSPTO_3228 1 None None None 28867520 Pathogen - hypothetical protein PSPTO_0289 1 None None None 28867672 Pathogen - hypothetical protein PSPTO_0442 1 None None None 28871711 Common prfC peptide chain release factor 3 PSPTO_4579 249 COG4108 PrfC, Peptide chain release factor RF-3 Translation, ribosomal structure and biogenesis 28868174 Common - phosphoenolpyruvate-protein phosphotransferase,EI/HPr/EIIA components PSPTO_0954 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 28868428 Common - 2-hydroxyacid dehydrogenase PSPTO_1215 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 28872328 Common - lipoprotein, NLPA family PSPTO_5216 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 28870366 Common - hypothetical protein PSPTO_3197 179 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872031 Common braE high-affinity branched-chain amino acid ABC transporter, permease protein BraE PSPTO_4917 154 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 28871130 Common - hypothetical protein PSPTO_3985 31 COG2900 SlyX, Uncharacterized protein conserved in bacteria Function unknown 28871513 Common groES co-chaperonin GroES PSPTO_4377 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 28868739 Common map-1 methionine aminopeptidase PSPTO_1533 246 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 28871794 Common - histone deacetylase family protein PSPTO_4662 161 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 28867253 Common - hypothetical protein PSPTO_0011 146 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 28871930 Pathogen - hypothetical protein PSPTO_4815 1 None None None 28872261 Common - hypothetical protein PSPTO_5149 10 None None None 28871890 Common - hypothetical protein PSPTO_4774 49 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872596 Common - hypothetical protein PSPTO_5491 18 COG3495 COG3495, Uncharacterized protein conserved in bacteria Function unknown 28870331 Common - transcriptional regulator, putative PSPTO_3160 29 None None None 28868576 Common - lipoprotein, putative PSPTO_1368 1 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 28872200 Common mdcA malonate decarboxylase, alpha subunit PSPTO_5087 27 COG4670 COG4670, Acyl CoA:acetate/3-ketoacid CoA transferase Lipid metabolism 28872094 Common - oxidoreductase, FAD-binding PSPTO_4980 4 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 28871777 Common - methyltransferase, putative PSPTO_4645 83 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 28872280 Common fbp fructose-1,6-bisphosphatase PSPTO_5168 108 COG0158 Fbp, Fructose-1,6-bisphosphatase Carbohydrate transport and metabolism 90818604 Pathogen - hypothetical protein PSPTO_5616 1 None None None 28872347 Pathogen - hypothetical protein PSPTO_5235 1 None None None 28871555 Common - hypothetical protein PSPTO_4420 114 COG0792 COG0792, Predicted endonuclease distantly related to archaeal Holliday junction resolvase DNA replication, recombination, and repair 28871438 Common - hypothetical protein PSPTO_4301 7 None None None 28869192 Common cheW-2 chemotaxis protein CheW PSPTO_1988 140 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28872043 Common dnaB replicative DNA helicase PSPTO_4929 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 28869744 Common - hypothetical protein PSPTO_2553 48 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 28872370 Common ctaG cytochrome C oxidase assembly protein PSPTO_5258 68 COG3175 COX11, Cytochrome oxidase assembly factor Posttranslational modification, protein turnover, chaperones 28868815 Common - hypothetical protein PSPTO_1609 3 COG3212 COG3212, Predicted membrane protein Function unknown 28871327 Common - hypothetical protein PSPTO_4185 34 COG4645 COG4645, Uncharacterized protein conserved in bacteria Function unknown 28870250 Common - oxidoreductase, aldo/keto reductase family PSPTO_3075 145 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28867783 Common - hypothetical protein PSPTO_0555 91 COG3178 COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases General function prediction only 28872197 Common mdcD malonate decarboxylase subunit beta PSPTO_5084 208 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 28871093 Common - hypothetical protein PSPTO_3946 6 None None None 28869628 Pathogen - hypothetical protein PSPTO_2433 1 None None None 28867905 Common - lipopolysaccharide biosynthesis protein, putative PSPTO_0677 144 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 28867388 Common - oligopeptide transporter, OPT family PSPTO_0148 39 COG1297 COG1297, Predicted membrane protein Function unknown 28871805 Pathogen - hypothetical protein PSPTO_4673 1 None None None 28872423 Common - transcriptional regulator, TetR family PSPTO_5311 32 COG1309 AcrR, Transcriptional regulator Transcription 28867728 Common bioD dithiobiotin synthetase PSPTO_0498 149 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 28868786 Common - hypothetical protein PSPTO_1580 69 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 28869551 Common - glycosyl transferase, group 2 family protein PSPTO_2354 32 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28871455 Common - integral membrane protein PSPTO_4318 18 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 28872561 Common - hypothetical protein PSPTO_5455 9 None None None 28869780 Common - bacterial luciferase family protein PSPTO_2590 93 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28869255 Common - ankyrin domain protein PSPTO_2051 92 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 28871259 Common - ompA family protein PSPTO_4117 117 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28867521 Common - hypothetical protein PSPTO_0290 4 None None None 28872089 Common - cytosine/purine/uracil/thiamine/allantoin permease family protein PSPTO_4975 36 COG1457 CodB, Purine-cytosine permease and related proteins Nucleotide transport and metabolism 28871609 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A PSPTO_4474 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28870713 Common - transcriptional regulator, IclR family PSPTO_3552 104 COG1414 IclR, Transcriptional regulator Transcription 162533084 Common rsuA ribosomal small subunit pseudouridine synthase A PSPTO_4247 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 28868797 Pathogen - hypothetical protein PSPTO_1591 1 None None None 28869231 Pathogen - hypothetical protein PSPTO_2027 1 None None None 28869506 Common nasT response regulator NasT PSPTO_2306 113 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 28868320 Common ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase PSPTO_1105 192 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 28870512 Common lolA outer-membrane lipoprotein carrier protein PSPTO_3348 72 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 28869502 Common - assimilatory nitrate reductase electron transfer subunit domain protein PSPTO_2302 218 COG1251 NirB, NAD(P)H-nitrite reductase Energy production and conversion 28871166 Common - hypothetical protein PSPTO_4023 96 COG1720 COG1720, Uncharacterized conserved protein Function unknown 28871057 Common - ATPase, AAA family PSPTO_3905 99 COG0714 COG0714, MoxR-like ATPases General function prediction only 28867919 Common ribE riboflavin synthase subunit alpha PSPTO_0691 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 28869373 Common - heat shock protein, Hsp20 family PSPTO_2170 71 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 28868065 Pathogen - hypothetical protein PSPTO_0840 1 None None None 28869869 Common pbpG D-alanyl-D-alanine endopeptidase PSPTO_2681 150 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 28871965 Common - hypothetical protein PSPTO_4850 41 COG3745 CpaB, Flp pilus assembly protein CpaB Intracellular trafficking and secretion 28867475 Common - hypothetical protein PSPTO_0243 2 None None None 28871192 Pathogen - hypothetical protein PSPTO_4049 2 None None None 28869479 Common cysB transcriptional regulator CysB PSPTO_2279 187 COG0583 LysR, Transcriptional regulator Transcription 28869426 Common - hypothetical protein PSPTO_2224 1 None None None 28868804 Common def peptide deformylase PSPTO_1598 212 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 28870970 Common accD acetyl-CoA carboxylase subunit beta PSPTO_3815 218 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 28872628 Common - cobalamin synthesis protein/P47K family protein PSPTO_5523 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 28870740 Common - methyl-accepting chemotaxis protein PSPTO_3580 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869737 Common - hypothetical protein PSPTO_2546 48 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 28867538 Common - hypothetical protein PSPTO_0307 2 COG5583 COG5583, Uncharacterized small protein Function unknown 28869025 Common - hypothetical protein PSPTO_1820 1 None None None 28869143 Common flgF flagellar basal body rod protein FlgF PSPTO_1939 121 COG4787 FlgF, Flagellar basal body rod protein Cell motility and secretion 28868918 Common cobC threonine-phosphate decarboxylase PSPTO_1712 136 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 28869832 Common - DNA-binding response regulator PSPTO_2643 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870418 Common - hypothetical protein PSPTO_3253 12 None None None 28872556 Pathogen - hypothetical protein PSPTO_5450 2 None None None 28868889 Common - hypothetical protein PSPTO_1683 25 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 28869648 Common folD-1 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase PSPTO_2453 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 28870442 Common - hypothetical protein PSPTO_3278 34 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 28868387 Common - glycosyl transferase, group 1 family protein PSPTO_1174 212 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28870480 Common gspF general secretion pathway protein F PSPTO_3316 140 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 28871333 Common - hypothetical protein PSPTO_4191 15 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 28867983 Common - transcriptional regulator, LysR family PSPTO_0755 129 COG0583 LysR, Transcriptional regulator Transcription 28869103 Common - sulfatase family protein PSPTO_1899 76 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 28870323 Common - cobalamin synthesis protein/P47K family protein PSPTO_3150 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 28871658 Common - hypothetical protein PSPTO_4524 44 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 28868517 Common - DNA-binding heavy metal response regulator PSPTO_1307 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28869839 Common - hypothetical protein PSPTO_2650 21 COG4705 COG4705, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 28871371 Common - hypothetical protein PSPTO_4229 34 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 28872563 Common - aliphatic amino acid carboxylate reductase, putative PSPTO_5457 200 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28871863 Common - site-specific recombinase, phage integrase family domain protein PSPTO_4746 3 None None None 28870798 Common - endoribonuclease L-PSP family protein PSPTO_3641 175 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28872486 Common - hypothetical protein PSPTO_5378 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 28870033 Common - hypothetical protein PSPTO_2850 65 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 28872487 Common - hypothetical protein PSPTO_5379 41 COG4336 COG4336, Uncharacterized conserved protein Function unknown 28869881 Common - hypothetical protein PSPTO_2693 15 None None None 28869992 Common - dienelactone hydrolase family protein PSPTO_2806 120 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 28871474 Common pyk pyruvate kinase PSPTO_4337 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 28869871 Common - hypothetical protein PSPTO_2683 1 None None None 28870227 Common - major facilitator family transporter PSPTO_3052 203 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869402 Common sucB dihydrolipoamide acetyltransferase PSPTO_2200 194 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 28872011 Common - sensor histidine kinase PSPTO_4896 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870165 Common - hypothetical protein PSPTO_2987 34 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28871065 Common - hypothetical protein PSPTO_3913 27 None None None 28868505 Common gltK glucose ABC transporter, ATP-binding protein PSPTO_1295 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 28871056 Pathogen - hypothetical protein PSPTO_3904 1 None None None 28869720 Common - hypothetical protein PSPTO_2527 136 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 28872644 Common - hypothetical protein PSPTO_5539 2 None None None 28870747 Common - hypothetical protein PSPTO_3587 41 COG4125 COG4125, Predicted membrane protein Function unknown 28871870 Common - hypothetical protein PSPTO_4754 4 None None None 28872661 Common - ISPssy, transposase PSPTO_5556 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868792 Pathogen - hypothetical protein PSPTO_1586 1 None None None 28867998 Common - hypothetical protein PSPTO_0770 126 COG1739 COG1739, Uncharacterized conserved protein Function unknown 28869601 Common xenA xenobiotic reductase A PSPTO_2405 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28871409 Common - transposase/IS protein PSPTO_4270 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28872509 Common cysQ 3'(2'),5'-bisphosphate nucleotidase PSPTO_5401 183 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 28872260 Common - polyhydroxyalkanoate granule-associated protein PhaI PSPTO_5148 18 None None None 28870999 Common - biopolymer transport protein ExbD/TolR family PSPTO_3846 28 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28870979 Common pilZ type IV pilus biogenesis protein PilZ PSPTO_3825 33 COG3215 PilZ, Tfp pilus assembly protein PilZ Cell motility and secretion / Intracellular trafficking and secretion 28871580 Common - mce-related protein PSPTO_4445 90 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 28871783 Common - oxidoreductase, molybdopterin-binding subunit PSPTO_4651 79 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 28868799 Common - hypothetical protein PSPTO_1593 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 28867733 Pathogen shcF type III chaperone protein ShcF PSPTO_0503 1 None None None 28871815 Common cfa5 coronafacic acid synthetase, ligase component PSPTO_4685 158 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28867828 Common - HIT family protein PSPTO_0600 233 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 28868152 Common - hypothetical protein PSPTO_0932 15 None None None 28868866 Common - helicase/SNF2 family domain protein PSPTO_1660 182 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 28870223 Common - hypothetical protein PSPTO_3048 79 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 28871406 Common - hypothetical protein PSPTO_4266 27 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 28871807 Common - transcriptional regulator, Sir2 family PSPTO_4675 150 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 28872168 Common - hypothetical protein PSPTO_5054 4 None None None 28870888 Common folD-2 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase PSPTO_3733 223 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 28872051 Common purA adenylosuccinate synthetase PSPTO_4937 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 28870389 Common - IS52, transposase PSPTO_3223 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869545 Common - transcriptional regulator, TetR family PSPTO_2347 95 COG1309 AcrR, Transcriptional regulator Transcription 28871734 Common - putative ABC transporter ATP-binding protein PSPTO_4602 247 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 28870413 Common - dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative PSPTO_3248 186 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28870836 Common - hypothetical protein PSPTO_3681 26 COG5528 COG5528, Predicted integral membrane protein Function unknown 28870589 Common - transcriptional regulator, putative PSPTO_3425 1 None None None 28867628 Common etfA-1 electron transfer flavoprotein, alpha subunit PSPTO_0398 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 28872474 Common - DnaJ domain protein PSPTO_5363 232 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 28869676 Common exbD-3 TonB system transport protein ExbD PSPTO_2483 108 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28867640 Common - threonine aldolase, low-specificity PSPTO_0410 112 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 28872342 Common - flagellar basal body-associated protein FliL-like protein PSPTO_5230 17 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 28869035 Common hisP histidine ABC transporter, ATP-binding protein PSPTO_1830 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 28872445 Common - hypothetical protein PSPTO_5333 19 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28867991 Common fecB iron-dicitrate transporter substrate-binding subunit PSPTO_0763 87 COG4594 FecB, ABC-type Fe3+-citrate transport system, periplasmic component Inorganic ion transport and metabolism 28872303 Common - AcrB/AcrD/AcrF family protein PSPTO_5191 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28869468 Common - acyl-CoA thioesterase I PSPTO_2268 101 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 28870782 Common - ion transport protein, putative PSPTO_3624 88 COG1226 Kch, Kef-type K+ transport systems, predicted NAD-binding component Inorganic ion transport and metabolism 28871025 Common minC septum formation inhibitor PSPTO_3872 92 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 28870918 Common - TPR domain protein PSPTO_3763 49 COG5651 COG5651, PPE-repeat proteins Cell motility and secretion 28869620 Common - monooxygenase, NtaA/SnaA/SoxA family PSPTO_2425 71 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28870900 Common lpxH UDP-2,3-diacylglucosamine hydrolase PSPTO_3745 75 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 28870337 Common - hypothetical protein PSPTO_3166 6 None None None 28871263 Common - hypothetical protein PSPTO_4121 21 COG5615 COG5615, Predicted integral membrane protein Function unknown 28872207 Common - acyl carrier protein PSPTO_5094 46 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28869802 Common - acetyltransferase, GNAT family PSPTO_2612 89 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 28868238 Common - ISPsy5, transposase PSPTO_1020 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869582 Common - transcriptional regulator, putative PSPTO_2385 98 COG0789 SoxR, Predicted transcriptional regulators Transcription 28872466 Common - hypothetical protein PSPTO_5355 1 None None None 28868736 Common - hypothetical protein PSPTO_1530 6 None None None 28868333 Common - amine oxidase, flavin-containing PSPTO_1118 72 COG2907 COG2907, Predicted NAD/FAD-binding protein General function prediction only 28867305 Common recG ATP-dependent DNA helicase RecG PSPTO_0065 212 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 28870992 Common sppA signal peptide peptidase SppA, 36K type PSPTO_3838 190 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 28867701 Common - nucleotidyltransferase, putative PSPTO_0471 112 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 28868391 Common trxB thioredoxin reductase PSPTO_1178 246 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 28867317 Common rph ribonuclease PH PSPTO_0077 198 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 28870638 Common - hypothetical protein PSPTO_3477 1 None None None 28869013 Common - hypothetical protein PSPTO_1807 5 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 28870651 Common - sugar ABC transporter, periplasmic sugar-binding protein PSPTO_3490 113 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28870383 Pathogen - hypothetical protein PSPTO_3217 1 None None None 28872080 Pathogen - hypothetical protein PSPTO_4966 1 None None None 28871215 Common - regulatory protein, putative PSPTO_4072 20 COG2331 COG2331, Uncharacterized protein conserved in bacteria Function unknown 28871913 Common - phosphomethylpyrimidine kinase PSPTO_4798 221 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 28870160 Common - hypothetical protein PSPTO_2982 20 None None None 28868443 Common algA alginate biosynthesis protein AlgA PSPTO_1232 164 COG0836 {ManC}, Mannose-1-phosphate guanylyltransferase Cell envelope biogenesis, outer membrane 28868668 Common - hypothetical protein PSPTO_1461 63 COG3034 COG3034, Uncharacterized protein conserved in bacteria Function unknown 28872059 Common - N-acetylmuramoyl-L-alanine amidase, family 3 PSPTO_4945 170 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 28871971 Common - TPR domain protein PSPTO_4856 11 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 28869008 Common - nitroreductase family protein PSPTO_1802 78 COG0778 NfnB, Nitroreductase Energy production and conversion 28868496 Common - RNA polymerase sigma-70 family protein PSPTO_1286 49 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28869729 Pathogen - hypothetical protein PSPTO_2536 1 None None None 28870018 Common - transcriptional regulator, LuxR family PSPTO_2833 3 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28870350 Common - lipoprotein, putative PSPTO_3180 16 COG3009 COG3009, Uncharacterized protein conserved in bacteria Function unknown 28871100 Common dapA dihydrodipicolinate synthase PSPTO_3953 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 28870260 Common - glutamine/glutamate ABC transporter, permease protein PSPTO_3085 178 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28871909 Common - transcriptional regulator, AsnC family PSPTO_4793 150 COG1522 Lrp, Transcriptional regulators Transcription 28872279 Common - hypothetical protein PSPTO_5167 10 None None None 28868354 Common - hypothetical protein PSPTO_1139 1 None None None 28868972 Common - lipase PSPTO_1766 137 COG0657 Aes, Esterase/lipase Lipid metabolism 28870609 Common - glycosyl transferase, group 1 family protein PSPTO_3448 132 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28869421 Pathogen - hypothetical protein PSPTO_2219 1 None None None 28869105 Common bphO bacteriophytochrome heme oxygenase BphO PSPTO_1901 12 COG3230 HemO, Heme oxygenase Inorganic ion transport and metabolism 28870608 Common - glycosyl transferase, group 1 family protein PSPTO_3447 193 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28870393 Common - hypothetical protein PSPTO_3227 10 None None None 28868800 Common - hypothetical protein PSPTO_1594 28 COG4852 COG4852, Predicted membrane protein Function unknown 28867811 Pathogen - hypothetical protein PSPTO_0583 1 None None None 28870206 Common - peptide ABC transporter, permease protein PSPTO_3030 219 COG4174 COG4174, ABC-type uncharacterized transport system, permease component General function prediction only 28871304 Common - oxidoreductase, molybdopterin-binding PSPTO_4162 183 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 28868201 Common ilvB acetolactate synthase 3 catalytic subunit PSPTO_0981 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 28867882 Common uvrA excinuclease ABC subunit A PSPTO_0654 243 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 28869912 Common - SCP-2 sterol transfer family protein PSPTO_2725 16 COG3255 COG3255, Putative sterol carrier protein Lipid metabolism 28868967 Pathogen - hypothetical protein PSPTO_1761 1 None None None 28868687 Common hom homoserine dehydrogenase PSPTO_1480 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 28870681 Common - universal stress protein family PSPTO_3520 116 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 28871827 Common - non-ribosomal peptide synthetase, terminal component PSPTO_4699 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28869024 Common - hypothetical protein PSPTO_1819 24 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870272 Common mexE multidrug efflux RND membrane fusion protein MexE PSPTO_3099 161 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28870236 Common - transcriptional regulator, LysR family PSPTO_3061 173 COG0583 LysR, Transcriptional regulator Transcription 28867907 Common - outer membrane protein OmpW PSPTO_0679 70 COG3047 OmpW, Outer membrane protein W Cell envelope biogenesis, outer membrane 28867401 Common - hypothetical protein PSPTO_0161 6 None None None 28867992 Common - calcium/proton antiporter, putative PSPTO_0764 60 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 28869718 Common - transcriptional regulator, IclR family PSPTO_2525 108 COG1414 IclR, Transcriptional regulator Transcription 28870938 Common - hypothetical protein PSPTO_3783 6 None None None 28871426 Common - hypothetical protein PSPTO_4289 84 COG1512 COG1512, Beta-propeller domains of methanol dehydrogenase type General function prediction only 28867616 Common epd glyceraldehyde-3-phosphate dehydrogenase PSPTO_0386 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 28869069 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_1864 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28867839 Common - pantothenate kinase PSPTO_0611 107 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 28870411 Common - hypothetical protein PSPTO_3246 4 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 28872499 Common - outer membrane porin, OprD family PSPTO_5391 7 None None None 28872333 Common ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase PSPTO_5221 130 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 28869907 Common nudC NADH pyrophosphatase PSPTO_2720 108 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 28869492 Common ppsA phosphoenolpyruvate synthase PSPTO_2292 235 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 28871926 Pathogen - hypothetical protein PSPTO_4811 1 None None None 28869322 Common tal transaldolase B PSPTO_2119 180 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 28872299 Common metQ-1 D-methionine-binding lipoprotein MetQ PSPTO_5187 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 28872651 Common - hypothetical protein PSPTO_5546 12 COG5309 COG5309, Exo-beta-1,3-glucanase Carbohydrate transport and metabolism 28870358 Common - hypothetical protein PSPTO_3189 7 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 28868178 Common - hypothetical protein PSPTO_0958 27 COG3662 COG3662, Uncharacterized protein conserved in bacteria Function unknown 28868947 Common gph-2 phosphoglycolate phosphatase PSPTO_1741 201 COG0546 Gph, Predicted phosphatases General function prediction only 28872498 Common - hypothetical protein PSPTO_5390 2 None None None 28872294 Common - putative amino-acid ABC transporter ATP-binding protein YecC PSPTO_5182 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28872668 Common - haemin ABC transporter, permease protein, putative PSPTO_5563 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 28868060 Common - alcohol dehydrogenase, zinc-containing PSPTO_0834 170 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 28867713 Common rarD-1 rarD protein PSPTO_0483 96 COG2962 RarD, Predicted permeases General function prediction only 28868827 Common - hypothetical protein PSPTO_1621 7 None None None 28867895 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_0667 54 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28870194 Common - hypothetical protein PSPTO_3018 63 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 28868160 Common terZ tellurium resistance protein TerZ PSPTO_0940 28 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 28867274 Common - hypothetical protein PSPTO_0032 18 COG1475 Spo0J, Predicted transcriptional regulators Transcription 28871884 Common - transposase/IS protein PSPTO_4768 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28872398 Common - HAD-superfamily hydrolase PSPTO_5286 86 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 28870156 Common - chitin-binding protein, putative PSPTO_2978 24 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 28867923 Common thiL thiamine monophosphate kinase PSPTO_0695 179 COG0611 ThiL, Thiamine monophosphate kinase Coenzyme metabolism 28871511 Common - PAP2 superfamily protein PSPTO_4375 22 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 28872602 Common - hypothetical protein PSPTO_5497 1 None None None 28871994 Common cbiD cobalt-precorrin-6A synthase PSPTO_4879 90 COG1903 CbiD, Cobalamin biosynthesis protein CbiD Coenzyme metabolism 28870557 Common - tail tape meausure protein PSPTO_3393 19 COG3941 COG3941, Mu-like prophage protein General function prediction only 28867303 Common - hypothetical protein PSPTO_0063 62 COG3791 COG3791, Uncharacterized conserved protein Function unknown 28869442 Common - transcriptional regulator, LuxR family PSPTO_2240 36 COG2771 CsgD, DNA-binding HTH domain-containing proteins Transcription 28870769 Common - site-specific recombinase, phage integrase family PSPTO_3609 67 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28871750 Common - hypothetical protein PSPTO_4618 11 COG1993 COG1993, Uncharacterized conserved protein Function unknown 28869015 Common ispZ intracellular septation protein A PSPTO_1809 90 COG2917 COG2917, Intracellular septation protein A Cell division and chromosome partitioning 28871396 Common - NADH:flavin oxidoreductase/NADH oxidase family protein PSPTO_4256 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28870422 Common - iron ABC transporter, ATP-binding protein PSPTO_3258 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 28868718 Common - hypothetical protein PSPTO_1512 101 COG1801 COG1801, Uncharacterized conserved protein Function unknown 28868169 Common - hypothetical protein PSPTO_0949 21 None None None 28869261 Common - hypothetical protein PSPTO_2057 2 None None None 28871482 Pathogen - hypothetical protein PSPTO_4346 2 None None None 28871535 Common secA preprotein translocase subunit SecA PSPTO_4400 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 28871562 Common - transcriptional regulator, AraC family PSPTO_4427 150 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28868704 Common - sensor histidine kinase/response regulator PSPTO_1497 221 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 28871984 Common - membrane protein, MarC family PSPTO_4869 155 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 28870199 Common uvrC excinuclease ABC subunit C PSPTO_3023 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 28867935 Common - hypothetical protein PSPTO_0707 8 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 28872449 Common hisH imidazole glycerol phosphate synthase subunit HisH PSPTO_5337 214 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 28868297 Pathogen - hypothetical protein PSPTO_1082 1 COG3311 AlpA, Predicted transcriptional regulator Transcription 28867867 Common rpsN 30S ribosomal protein S14 PSPTO_0639 203 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 28870675 Common topA DNA topoisomerase I PSPTO_3514 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 28867499 Common - bacterial extracellular solute-binding protein, family 5 PSPTO_0267 114 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 28870800 Common - aldehyde dehydrogenase family protein PSPTO_3644 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28869612 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_2417 158 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 28867394 Common - hypothetical protein PSPTO_0154 3 None None None 28869853 Common - spermidine/putrescine ABC transporter, permease protein, putative PSPTO_2665 218 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 28871675 Common - methyl-accepting chemotaxis protein PSPTO_4541 161 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869541 Common - outer membrane porin, OprD family PSPTO_2343 7 None None None 28868660 Common lsc-1 levansucrase PSPTO_1453 16 None None None 28869168 Common - response regulator PSPTO_1964 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28869345 Common - hypothetical protein PSPTO_2142 6 None None None 28870987 Common fabD acyl-carrier-protein S-malonyltransferase PSPTO_3833 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 28870287 Common - lipoprotein, putative PSPTO_3114 2 None None None 28871174 Common - decarboxylase family protein PSPTO_4031 104 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 28868441 Common - hypothetical protein PSPTO_1230 1 None None None 28867430 Common - transposase/IS protein PSPTO_0193 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28871967 Common - hypothetical protein PSPTO_4852 41 COG4963 CpaE, Flp pilus assembly protein, ATPase CpaE Intracellular trafficking and secretion 28868052 Common pilS sensor protein PilS PSPTO_0824 221 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 28872353 Common ubiD 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PSPTO_5241 154 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 28869895 Common mltR transcriptional activator MltR PSPTO_2708 151 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28867917 Common - hypothetical protein PSPTO_0689 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 28868071 Common - hypothetical protein PSPTO_0850 19 None None None 28869055 Common - hypothetical protein PSPTO_1850 14 None None None 28872658 Common - methyl-accepting chemotaxis protein PSPTO_5553 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869436 Common - ISPssy, transposase PSPTO_2234 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867320 Common pyrE orotate phosphoribosyltransferase PSPTO_0080 132 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 28872406 Common serA D-3-phosphoglycerate dehydrogenase PSPTO_5294 231 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 28868281 Common - methyl-accepting chemotaxis protein PSPTO_1066 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28868425 Common - hypothetical protein PSPTO_1212 6 None None None 28871904 Common kptA RNA 2'-phosphotransferase PSPTO_4788 44 COG1859 KptA, RNA:NAD 2'-phosphotransferase Translation, ribosomal structure and biogenesis 28869563 Common - lipoprotein, putative PSPTO_2366 2 None None None 28871892 Common hopI1 type III effector HopI1 PSPTO_4776 211 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 28867416 Common - LysM domain protein PSPTO_0176 46 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 28871059 Common - hypothetical protein PSPTO_3907 30 None None None 28871250 Common - high-affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_4108 148 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28868382 Common pta phosphate acetyltransferase PSPTO_1169 180 COG0280 Pta, Phosphotransacetylase Energy production and conversion 28867785 Common - DnaJ-like protein DjlA, putative PSPTO_0557 63 COG1076 DjlA, DnaJ-domain-containing proteins 1 Posttranslational modification, protein turnover, chaperones 28867858 Common rpsS 30S ribosomal protein S19 PSPTO_0630 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 28869841 Common - bacteriophytochrome, putative PSPTO_2652 222 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 28868979 Common - hypothetical protein PSPTO_1773 31 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 28867450 Common amt-1 ammonium transporter PSPTO_0218 202 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 28867741 Common pqqB pyrroloquinoline quinone biosynthesis protein PqqB PSPTO_0512 34 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 28867748 Common - transcriptional regulator, AsnC family PSPTO_0519 142 COG1522 Lrp, Transcriptional regulators Transcription 28867595 Common - transcriptional regulator, AraC family PSPTO_0365 121 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28869042 Pathogen - hypothetical protein PSPTO_1837 1 None None None 28871064 Common - cyclic nucleotide-binding protein PSPTO_3912 71 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 28867490 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein PSPTO_0258 227 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 28871109 Pathogen - hypothetical protein PSPTO_3962 1 None None None 28869736 Common - hypothetical protein PSPTO_2545 16 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 28871070 Common - hypothetical protein PSPTO_3918 74 COG2983 COG2983, Uncharacterized conserved protein Function unknown 28869428 Common - hypothetical protein PSPTO_2226 1 None None None 28872690 Common - hypothetical protein PSPTO_5589 11 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 28872535 Common - hypothetical protein PSPTO_5427 47 COG3519 COG3519, Uncharacterized protein conserved in bacteria Function unknown 28869247 Common aroC chorismate synthase PSPTO_2043 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 28871852 Pathogen hopQ1-2 type III effector HopQ1-2 PSPTO_4732 4 None None None 28869846 Common - hypothetical protein PSPTO_2658 60 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 28870730 Common - acetyltransferase, GNAT family PSPTO_3570 5 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 28871212 Pathogen - hypothetical protein PSPTO_4069 1 None None None 28868583 Pathogen hopM1 type III effector HopM1 PSPTO_1375 1 None None None 28871612 Common - K+-dependent Na+/Ca+ exchanger related-protein PSPTO_4477 102 COG0530 ECM27, Ca2+/Na+ antiporter Inorganic ion transport and metabolism 28870708 Common - transcriptional regulator, LysR family PSPTO_3547 98 COG0583 LysR, Transcriptional regulator Transcription 28869751 Common phnH carbon-phosphorus lyase complex subunit PSPTO_2560 35 COG3625 PhnH, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 28869776 Common amt-2 ammonium transporter PSPTO_2586 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 28868070 Common - hypothetical protein PSPTO_0849 22 None None None 28869419 Common - hypothetical protein PSPTO_2217 29 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28870264 Common nikB nickel ABC transporter, permease protein PSPTO_3089 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28872248 Common - staphylococcal nuclease homologue PSPTO_5135 36 COG1525 COG1525, Micrococcal nuclease (thermonuclease) homologs DNA replication, recombination, and repair 28872378 Common znuC zinc ABC transporter, ATP-binding protein PSPTO_5266 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 28869276 Common - auxin-binding protein, putative PSPTO_2072 28 COG3837 COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 28869523 Pathogen - hypothetical protein PSPTO_2323 1 None None None 28868264 Common - hypothetical protein PSPTO_1047 24 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 28872634 Common - hypothetical protein PSPTO_5529 8 None None None 28872609 Common - transcriptional regulator, GntR family PSPTO_5504 181 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 28867982 Common - alcohol dehydrogenase, zinc-containing PSPTO_0754 170 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28870299 Common - alpha-amylase family protein PSPTO_3126 169 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 28869132 Common cheR-2 chemotaxis protein methyltransferase CheR PSPTO_1928 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 28871151 Pathogen - hypothetical protein PSPTO_4008 1 None None None 28868717 Common - hypothetical protein PSPTO_1511 1 None None None 28872703 Common atpE F0F1 ATP synthase subunit C PSPTO_5604 65 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 28871467 Common - hypothetical protein PSPTO_4330 11 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870062 Common - hypothetical protein PSPTO_2880 6 None None None 28871690 Common - hypothetical protein PSPTO_4556 2 None None None 28868077 Common - hypothetical protein PSPTO_0856 14 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 28867957 Common mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase PSPTO_0729 210 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 28868240 Common - MotA/TolQ/ExbB proton channel family protein PSPTO_1023 6 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28868047 Common - hypothetical protein PSPTO_0819 39 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 28870072 Common - PAP2 superfamily protein PSPTO_2893 26 COG3907 COG3907, PAP2 (acid phosphatase) superfamily protein General function prediction only 28867678 Common - glutathione S-transferase, putative PSPTO_0448 65 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28872475 Pathogen - hypothetical protein PSPTO_5364 1 None None None 28871202 Common fdxA ferredoxin PSPTO_4059 133 COG1146 COG1146, Ferredoxin Energy production and conversion 28870577 Common - hypothetical protein PSPTO_3413 6 None None None 28872713 Common rnpA ribonuclease P PSPTO_5614 56 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 28867376 Common - alginate regulatory protein AlgR3 PSPTO_0136 1 COG5373 COG5373, Predicted membrane protein Function unknown 28868758 Common pyrG CTP synthetase PSPTO_1552 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 28869530 Pathogen - hypothetical protein PSPTO_2332 1 None None None 28869371 Common - 4-hydroxybenzoyl-CoA thioesterase domain protein PSPTO_2168 29 COG0824 FcbC, Predicted thioesterase General function prediction only 28868745 Common cdsA-1 phosphatidate cytidylyltransferase PSPTO_1539 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 28868762 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PSPTO_1556 190 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 28869205 Common ccoP cytochrome c oxidase, cbb3-type, subunit III PSPTO_2001 83 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 28870781 Pathogen - hypothetical protein PSPTO_3623 1 None None None 28869220 Common acnA aconitate hydratase PSPTO_2016 222 COG1048 AcnA, Aconitase A Energy production and conversion 28872141 Common - transcriptional regulator, GntR family PSPTO_5027 127 COG1802 GntR, Transcriptional regulators Transcription 28868554 Common - sensory box/GGDEF domain protein PSPTO_1346 193 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28867562 Common - hypothetical protein PSPTO_0331 1 None None None 28868694 Common - hypothetical protein PSPTO_1487 52 COG4681 COG4681, Uncharacterized protein conserved in bacteria Function unknown 28870055 Common - hypothetical protein PSPTO_2873 3 None None None 28871050 Common - sodium/bile acid symporter family protein PSPTO_3898 77 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 28867852 Common tuf elongation factor Tu PSPTO_0624 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 28868727 Common - hypothetical protein PSPTO_1521 5 None None None 28871131 Common - hypothetical protein PSPTO_3986 66 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 28870772 Common - ISPsy5, transposase PSPTO_3613 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868270 Common - hypothetical protein PSPTO_1053 123 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28870550 Common - hypothetical protein PSPTO_3386 25 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 28868769 Common pcm protein-L-isoaspartate O-methyltransferase PSPTO_1563 156 COG2518 Pcm, Protein-L-isoaspartate carboxylmethyltransferase Posttranslational modification, protein turnover, chaperones 28867609 Common - heavy metal sensor histidine kinase PSPTO_0379 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28868191 Common sfsA sugar fermentation stimulation protein A PSPTO_0971 109 COG1489 SfsA, DNA-binding protein, stimulates sugar fermentation General function prediction only 28871972 Common - hypothetical protein PSPTO_4857 1 None None None 28868667 Common - hypothetical protein PSPTO_1460 53 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 28869196 Common - hypothetical protein PSPTO_1992 3 None None None 28868814 Common - hypothetical protein PSPTO_1608 120 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 28870005 Common - hypothetical protein PSPTO_2820 5 None None None 28871035 Common - HAD-superfamily hydrolase PSPTO_3883 71 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 28871788 Common - hypothetical protein PSPTO_4656 155 None None None 28869707 Common - hypothetical protein PSPTO_2514 29 None None None 28870401 Pathogen - hypothetical protein PSPTO_3236 1 None None None 28872106 Common - carbamoyltransferase family protein PSPTO_4992 52 COG2192 COG2192, Predicted carbamoyl transferase, NodU family Posttranslational modification, protein turnover, chaperones 28871117 Common tolB translocation protein TolB PSPTO_3972 154 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 28868216 Common - HD domain protein PSPTO_0996 61 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 28868200 Common - hypothetical protein PSPTO_0980 5 None None None 28869510 Common rmf ribosome modulation factor-related protein PSPTO_2310 21 COG3130 Rmf, Ribosome modulation factor Translation, ribosomal structure and biogenesis 28870615 Common - transcriptional regulator, LysR family PSPTO_3454 192 COG0583 LysR, Transcriptional regulator Transcription 28867970 Common - MaoC-like domain protein PSPTO_0742 32 COG2030 MaoC, Acyl dehydratase Lipid metabolism 28869227 Common - exonuclease, putative PSPTO_2023 17 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 28867290 Common - hypothetical protein PSPTO_0049 42 COG4422 COG4422, Bacteriophage protein gp37 Function unknown 28869684 Common - oxidoreductase, aldo/keto reductase family PSPTO_2491 193 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28871264 Common tsk nucleoside-specific channel-forming protein PSPTO_4122 18 COG3248 Tsx, Nucleoside-binding outer membrane protein Cell envelope biogenesis, outer membrane 28870850 Common - transcriptional regulator, TetR family PSPTO_3695 75 COG1309 AcrR, Transcriptional regulator Transcription 28867504 Common iscS-1 cysteine desulfurase PSPTO_0272 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 28868959 Common - hypothetical protein PSPTO_1753 126 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 28869364 Common - penicillin amidase family protein PSPTO_2161 57 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 28868867 Common nrdB ribonucleotide-diphosphate reductase subunit beta PSPTO_1661 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 28871578 Common - STAS domain protein PSPTO_4443 7 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 28867755 Pathogen - hypothetical protein PSPTO_0526 1 None None None 28868375 Common - ABC transporter, ATP-binding protein PSPTO_1160 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 28869139 Common flgD flagellar basal body rod modification protein PSPTO_1935 111 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 28869208 Common ccoN cytochrome c oxidase, cbb3-type, subunit I PSPTO_2004 142 COG3278 CcoN, Cbb3-type cytochrome oxidase, subunit 1 Posttranslational modification, protein turnover, chaperones 28870854 Common - methyl-accepting chemotaxis protein PSPTO_3699 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871415 Common - major facilitator family transporter PSPTO_4278 179 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870070 Common - UDP-glucose 6-dehydrogenase PSPTO_2891 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 28870559 Common - major tail tube protein PSPTO_3395 29 COG3498 COG3498, Phage tail tube protein FII General function prediction only 28868251 Common wssI cell morphology protein PSPTO_1034 6 None None None 28871699 Common - ISPsy5, Orf1 PSPTO_4566 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872389 Common hutI imidazolonepropionase PSPTO_5277 104 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 28870753 Common - sulfate permease family protein PSPTO_3593 155 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 28872070 Common - hypothetical protein PSPTO_4956 11 None None None 28868308 Common - relaxase/mobilization nuclease domain protein PSPTO_1093 22 None None None 28871416 Common - hypothetical protein PSPTO_4279 73 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 28871167 Common fnr-1 ferredoxin--NADP reductase PSPTO_4024 107 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 28868269 Common - senescence marker protein-30 family protein PSPTO_1052 83 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 28870135 Common medH methanol dehydrogenase, NAD-dependent PSPTO_2957 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 28872437 Common - glutaredoxin PSPTO_5325 124 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 28867832 Common argC N-acetyl-gamma-glutamyl-phosphate reductase PSPTO_0604 214 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 28869814 Common - hypothetical protein PSPTO_2624 35 None None None 28869632 Common - ISPsy5, transposase PSPTO_2437 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870926 Common - major facilitator family transporter PSPTO_3771 97 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28870341 Common - glycosyl hydrolase, family 3 PSPTO_3170 97 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 28869544 Common - 4-hydroxyphenylpyruvate dioxygenase, putative PSPTO_2346 85 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 28871002 Common - Rhs element Vgr protein PSPTO_3849 61 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28867349 Common - hypothetical protein PSPTO_0109 78 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 28869091 Common - transcriptional regulator, LysR family PSPTO_1887 162 COG0583 LysR, Transcriptional regulator Transcription 28871791 Common - HAD-superfamily hydrolase PSPTO_4659 90 COG0546 Gph, Predicted phosphatases General function prediction only 28868198 Common - hypothetical protein PSPTO_0978 7 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 28870596 Common - ISPsy4, transposase PSPTO_3433 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869398 Common - succinate dehydrogenase, hydrophobic membrane anchor protein PSPTO_2196 52 COG2142 SdhD, Succinate dehydrogenase, hydrophobic anchor subunit Energy production and conversion 28869572 Common - lipoprotein, putative PSPTO_2375 8 None None None 28872266 Common hisE phosphoribosyl-ATP pyrophosphatase PSPTO_5154 177 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 28871551 Common mraW S-adenosyl-methyltransferase MraW PSPTO_4416 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 28872530 Common - FHA domain protein PSPTO_5422 28 COG3456 COG3456, Uncharacterized conserved protein, contains FHA domain Signal transduction mechanisms 28872546 Common - Rhs family protein PSPTO_5438 73 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28869334 Common - sensor histidine kinase PSPTO_2131 145 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 28872222 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSPTO_5109 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868522 Common - fimbral biosynthesis protein PSPTO_1312 6 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 28871571 Common - hypothetical protein PSPTO_4436 33 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 28870312 Common - hypothetical protein PSPTO_3139 16 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 28868277 Pathogen - hypothetical protein PSPTO_1060 1 None None None 28869280 Pathogen - hypothetical protein PSPTO_2076 2 None None None 28871349 Common - hypothetical protein PSPTO_4207 14 None None None 28871282 Common - amino acid ABC transporter, ATP-binding protein PSPTO_4140 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 28867427 Common - hdtS protein PSPTO_0187 188 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28870879 Common lon-1 ATP-dependent protease La PSPTO_3724 212 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 28868564 Common - isochorismatase family protein PSPTO_1356 135 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28868773 Common - ISPsy6, transposase PSPTO_1567 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870860 Common - enoly-CoA hydratase/isomerase family protein PSPTO_3705 146 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 28872367 Common cynT carbonic anhydrase PSPTO_5255 155 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 28870898 Common glnS glutaminyl-tRNA synthetase PSPTO_3743 246 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 28868410 Common - hypothetical protein PSPTO_1197 3 COG3141 COG3141, Uncharacterized protein conserved in bacteria Function unknown 28872540 Common - hypothetical protein PSPTO_5432 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 28870115 Common - hypothetical protein PSPTO_2936 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 28867804 Common - hypothetical protein PSPTO_0576 4 None None None 28869191 Common - CheW domain protein PSPTO_1987 14 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28868207 Common - hypothetical protein PSPTO_0987 2 None None None 28871094 Common - hypothetical protein PSPTO_3947 3 None None None 28869000 Common - transcriptional regulator, LysR family PSPTO_1794 190 COG0583 LysR, Transcriptional regulator Transcription 28868473 Common - hypothetical protein PSPTO_1262 60 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 28869356 Common pvdE pyoverdine ABC transporter, ATP-binding/permease protein PSPTO_2153 248 COG4615 PvdE, ABC-type siderophore export system, fused ATPase and permease components Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism 28870046 Common - transcriptional regulator, LysR family PSPTO_2864 158 COG0583 LysR, Transcriptional regulator Transcription 28867279 Common - helicase domain protein PSPTO_0037 62 COG4889 COG4889, Predicted helicase General function prediction only 28868370 Common - endoribonuclease L-PSP family protein PSPTO_1155 174 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28870563 Common - tail protein I PSPTO_3399 26 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 28870598 Common - peptidase, M24 family protein PSPTO_3437 178 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 28871450 Common - hypothetical protein PSPTO_4313 1 None None None 28869763 Common - peptide ABC transporter, ATP-binding protein PSPTO_2572 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 28868809 Pathogen - hypothetical protein PSPTO_1603 1 None None None 28870434 Pathogen - hypothetical protein PSPTO_3270 1 None None None 28867287 Common - hypothetical protein PSPTO_0046 35 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 28869455 Common - methyl-accepting chemotaxis protein PSPTO_2254 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28868996 Common - acyl-CoA dehydrogenase family protein PSPTO_1790 144 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28869795 Common - TonB-dependent siderophore receptor, putative PSPTO_2605 115 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28869804 Common - dioxygenase, TauD/TfdA family PSPTO_2614 46 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 28871754 Common - transcriptional regulator, MerR family PSPTO_4622 140 COG0789 SoxR, Predicted transcriptional regulators Transcription 28869259 Common speE spermidine synthase PSPTO_2055 131 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 28870229 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_3054 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28871959 Common dinF DNA-damage-inducible protein F PSPTO_4844 99 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 28869449 Common - lipoprotein, putative PSPTO_2247 1 None None None 28868839 Common asnB asparagine synthetase, glutamine-hydrolyzing PSPTO_1633 159 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 28868310 Common - ISPsy4, transposase PSPTO_1095 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870106 Common oprE outer membrane porin OprE PSPTO_2927 9 None None None 28867411 Common - ISPssy, transposase PSPTO_0171 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869562 Common - hypothetical protein PSPTO_2365 1 None None None 28870956 Common - major facilitator family transporter PSPTO_3801 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870166 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_2988 112 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 28872527 Common - hypothetical protein PSPTO_5419 48 COG3455 COG3455, Uncharacterized protein conserved in bacteria Function unknown 28867437 Common - cysteine synthase PSPTO_0203 220 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 28867930 Common - hypothetical protein PSPTO_0702 51 COG4804 COG4804, Uncharacterized conserved protein Function unknown 28867632 Common - iron-sulfur cluster-binding protein PSPTO_0402 165 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 28869876 Common - major facilitator family transporter PSPTO_2688 117 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28871391 Common - ISPsy5, transposase PSPTO_4251 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872588 Common phoU phosphate transport system protein PhoU PSPTO_5483 200 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 28869822 Common - cation ABC transporter, ATP-binding protein PSPTO_2633 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 28869735 Common - hypothetical protein PSPTO_2544 50 COG3517 COG3517, Uncharacterized protein conserved in bacteria Function unknown 162533082 Common truA tRNA pseudouridine synthase A PSPTO_3817 234 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 28868223 Common - GGDEF domain protein PSPTO_1004 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28868645 Common engA GTP-binding protein EngA PSPTO_1438 234 COG1160 COG1160, Predicted GTPases General function prediction only 28867347 Common - hypothetical protein PSPTO_0107 74 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 28871404 Common - hypothetical protein PSPTO_4264 40 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 28868448 Common algX alginate biosynthesis protein AlgX PSPTO_1237 6 None None None 28868908 Common - permease, putative PSPTO_1702 174 COG0628 PerM, Predicted permease General function prediction only 28870662 Common - transcriptional regulator, RpiR family PSPTO_3501 62 COG1737 RpiR, Transcriptional regulators Transcription 28868871 Common - hypothetical protein PSPTO_1665 12 None None None 28871736 Common - site-specific recombinase, phage integrase family PSPTO_4604 11 None None None 28869453 Common - hypothetical protein PSPTO_2251 1 COG5607 COG5607, Uncharacterized conserved protein Function unknown 28868399 Common - flavodoxin PSPTO_1186 45 COG0716 FldA, Flavodoxins Energy production and conversion 28868393 Common - hypothetical protein PSPTO_1180 38 COG3492 COG3492, Uncharacterized protein conserved in bacteria Function unknown 28869793 Common - ABC transporter, ATP-binding/permease protein PSPTO_2603 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28872057 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase PSPTO_4943 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 28870906 Common - hypothetical protein PSPTO_3751 15 COG3313 COG3313, Predicted Fe-S protein General function prediction only 28872442 Common - hypothetical protein PSPTO_5330 66 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 28872468 Common - amino acid ABC transporter, ATP-binding protein PSPTO_5357 249 COG4598 HisP, ABC-type histidine transport system, ATPase component Amino acid transport and metabolism 28870388 Pathogen - hypothetical protein PSPTO_3222 1 None None None 28867541 Common - sulfate ABC transporter, permease protein CysW PSPTO_0310 225 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 28871589 Common yfiA ribosomal subunit interface protein PSPTO_4454 118 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 28870501 Pathogen - hypothetical protein PSPTO_3337 3 None None None 28869801 Common - tRNA synthetase class II family protein PSPTO_2611 126 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28868131 Common cheW-1 chemotaxis protein CheW PSPTO_0911 133 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28868336 Common phrB deoxyribodipyrimidine photolyase PSPTO_1121 134 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 28871593 Pathogen - hypothetical protein PSPTO_4458 1 None None None 28868120 Pathogen - hypothetical protein PSPTO_0900 1 None None None 28871520 Pathogen - hypothetical protein PSPTO_4384 1 None None None 28868931 Common - hypothetical protein PSPTO_1725 1 None None None 28870464 Common - efflux transporter, RND family, MFP subunit PSPTO_3300 157 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28871289 Common metG methionyl-tRNA synthetase PSPTO_4147 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28868340 Common - hypothetical protein PSPTO_1125 10 None None None 28870712 Common hmgA homogentisate 1,2-dioxygenase PSPTO_3551 46 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 28870720 Pathogen - GDA1/CD39 family protein PSPTO_3560 3 COG5371 COG5371, Golgi nucleoside diphosphatase Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones 28868218 Common - alkylphosphonate utilization operon protein PhnA, putative PSPTO_0998 89 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 28868784 Common - transcriptional regulator, LysR family PSPTO_1578 178 COG0583 LysR, Transcriptional regulator Transcription 28867467 Common - hypothetical protein PSPTO_0235 39 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 28869291 Common - hypothetical protein PSPTO_2087 1 None None None 28868083 Common - hypothetical protein PSPTO_0862 22 None None None 28868897 Common gacS sensor histidine kinase/response regulator GacS PSPTO_1691 224 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28872013 Common yegD heat shock protein YegD PSPTO_4898 223 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 28868552 Common - hypothetical protein PSPTO_1344 10 None None None 28872242 Common pilP type IV pilus biogenesis protein PilP PSPTO_5129 37 COG3168 PilP, Tfp pilus assembly protein PilP Cell motility and secretion / Intracellular trafficking and secretion 28869021 Pathogen - hypothetical protein PSPTO_1816 1 None None None 28870089 Common - tartrate transporter, putative PSPTO_2910 107 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28868599 Pathogen hrpV negative regulator of hrp expression HrpV PSPTO_1391 1 None None None 28871725 Pathogen hopT1-2 type III effector HopT1-2 PSPTO_4593 2 None None None 28872204 Common - hypothetical protein PSPTO_5091 34 None None None 28869350 Common - pyoverdine sidechain peptide synthetase I, epsilon-Lys module PSPTO_2147 208 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28867557 Common - hypothetical protein PSPTO_0326 76 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 28868610 Common hrcV type III secretion protein HrcV PSPTO_1402 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 28871278 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_4136 173 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28868233 Common - TonB-dependent receptor, putative PSPTO_1014 94 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28871020 Common - dihydrodipicolinate synthetase family protein PSPTO_3867 223 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 28867642 Common - hypothetical protein PSPTO_0412 142 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 28868680 Common rpsP 30S ribosomal protein S16 PSPTO_1473 202 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 28868812 Common - sensor histidine kinase PSPTO_1606 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870666 Common - cytochrome b561, putative PSPTO_3505 89 COG3038 CybB, Cytochrome B561 Energy production and conversion 28868791 Common - hypothetical protein PSPTO_1585 17 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869480 Common cysH phosphoadenosine phosphosulfate reductase PSPTO_2280 155 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 28869674 Common tonB-2 tonB protein PSPTO_2481 40 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28870252 Common - NADH:flavin oxidoreductase / NADH oxidase family protein PSPTO_3077 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28871330 Pathogen - hypothetical protein PSPTO_4188 1 None None None 28871500 Pathogen - hypothetical protein PSPTO_4364 1 None None None 28872598 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit PSPTO_5493 194 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 28871808 Pathogen - hypothetical protein PSPTO_4676 1 None None None 28868989 Common - hypothetical protein PSPTO_1783 89 COG2607 COG2607, Predicted ATPase (AAA+ superfamily) General function prediction only 28869509 Common pyrD dihydroorotate dehydrogenase 2 PSPTO_2309 232 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 28870082 Common - transcriptional regulator, LysR family PSPTO_2903 102 COG0583 LysR, Transcriptional regulator Transcription 28868604 Pathogen hrcQb type III secretion protein HrcQb PSPTO_1396 2 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 28871605 Common - rod shape-determining protein MreD PSPTO_4470 42 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 28871423 Common - hypothetical protein PSPTO_4286 32 COG2519 GCD14, tRNA(1-methyladenosine) methyltransferase and related methyltransferases Translation, ribosomal structure and biogenesis 28868685 Common xerD site-specific tyrosine recombinase XerD PSPTO_1478 233 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28870390 Common - ISPsy4, transposase PSPTO_3224 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870030 Common - TonB-dependent siderophore receptor, putative PSPTO_2846 107 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28871363 Common - serine protease, MucD PSPTO_4221 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 28869298 Common - hypothetical protein PSPTO_2094 5 None None None 28867625 Common - hypothetical protein PSPTO_0395 10 None None None 28870931 Common - hypothetical protein PSPTO_3776 1 None None None 28868138 Pathogen - hypothetical protein PSPTO_0918 1 None None None 28872296 Common - acyl-CoA dehydrogenase family protein PSPTO_5184 89 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28872646 Common cdsA-2 phosphatidate cytidylyltransferase PSPTO_5541 214 COG4589 COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase General function prediction only 28870636 Common - putative monovalent cation/H+ antiporter subunit F PSPTO_3475 64 COG2212 MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit Inorganic ion transport and metabolism 28872553 Common - hypothetical protein PSPTO_5447 7 None None None 28867564 Common - hypothetical protein PSPTO_0333 63 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 28872629 Common - hypothetical protein PSPTO_5524 1 None None None 28872087 Common - mutT/nudix family protein PSPTO_4973 82 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 28869064 Common - isochorismatase family protein PSPTO_1859 119 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28869760 Common - amidase family protein PSPTO_2569 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28869604 Common ureD-1 urease accessory protein UreD PSPTO_2408 37 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 28871227 Common - mannuronan C-5-epimerase, putative PSPTO_4084 103 COG5434 PGU1, Endopygalactorunase Cell envelope biogenesis, outer membrane 28870020 Common - hypothetical protein PSPTO_2835 5 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28872340 Pathogen - hypothetical protein PSPTO_5228 1 None None None 28872161 Common proC pyrroline-5-carboxylate reductase PSPTO_5047 216 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 28871872 Pathogen - hypothetical protein PSPTO_4756 1 None None None 28869476 Common panE-1 2-dehydropantoate 2-reductase PSPTO_2276 93 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 28868575 Common - acetyltransferase, GNAT family PSPTO_1367 11 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 28871479 Common - insecticidal toxin protein, putative PSPTO_4343 19 None None None 28870719 Common glcB-2 malate synthase G PSPTO_3559 60 COG2225 AceB, Malate synthase Energy production and conversion 28872205 Common - acyltransferase family protein PSPTO_5092 108 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28872176 Common - gluconate transporter family protein PSPTO_5063 78 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 28872345 Common - colicin/pyocin immunity family protein PSPTO_5233 8 None None None 28870373 Common - hypothetical protein PSPTO_3204 69 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 28869257 Common - hypothetical protein PSPTO_2053 107 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 28867730 Common - acyl-CoA dehydrogenase family protein PSPTO_0500 147 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28872079 Common - Ser/Thr protein phosphatase PSPTO_4965 85 COG1409 Icc, Predicted phosphohydrolases General function prediction only 28871191 Pathogen - hypothetical protein PSPTO_4048 1 None None None 28872329 Common - sigma-54-binding protein PSPTO_5217 170 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28867849 Common rpsL 30S ribosomal protein S12 PSPTO_0621 237 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 28872092 Common kdtA 3-deoxy-D-manno-octulosonic-acid transferase PSPTO_4978 128 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 28871836 Pathogen - coronamic acid synthetase, cyclase component, putative PSPTO_4711 1 None None None 28869629 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein PSPTO_2434 228 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 28872195 Common - phosphoribosyl-dephospho-CoA transferase PSPTO_5082 13 None None None 28871087 Pathogen - hypothetical protein PSPTO_3937 1 None None None 28868748 Common - outer membrane protein PSPTO_1542 161 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 28871576 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase PSPTO_4441 210 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 28867540 Common cysT sulfate ABC transporter, permease protein CysT PSPTO_0309 237 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 28871936 Common - D-alanyl-D-alanine carboxypeptidase PSPTO_4821 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 28872365 Common elbB isoprenoid biosynthesis protein with amidotransferase-like domain PSPTO_5253 38 COG3155 ElbB, Uncharacterized protein involved in an early stage of isoprenoid biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28869077 Common - transcriptional regulator, GntR family PSPTO_1873 122 COG1802 GntR, Transcriptional regulators Transcription 28871146 Common - hypothetical protein PSPTO_4003 12 None None None 28870181 Common xylF D-xylose ABC transporter, periplasmic-D xylose binding protein PSPTO_3003 94 COG4213 XylF, ABC-type xylose transport system, periplasmic component Carbohydrate transport and metabolism 28872502 Common - carbon-nitrogen hydrolase family protein PSPTO_5394 200 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28872402 Common - hypothetical protein PSPTO_5290 11 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 28871160 Pathogen - hypothetical protein PSPTO_4017 1 None None None 28867351 Common - sigma-54 dependent transcriptional regulator PSPTO_0111 174 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 28869130 Common flgA flagellar basal body P-ring biosynthesis protein FlgA PSPTO_1926 62 COG1261 FlgA, Flagellar basal body P-ring biosynthesis protein Cell motility and secretion / Posttranslational modification, protein turnover, chaperones 28871457 Common - hypothetical protein PSPTO_4320 4 None None None 28871869 Common - hypothetical protein PSPTO_4753 5 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 28872095 Common - oxidoreductase, aldo/keto reductase family PSPTO_4981 193 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28872133 Common - ISPsy9, transposase OrfA PSPTO_5019 23 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868887 Pathogen - hypothetical protein PSPTO_1681 1 None None None 28869379 Common asd-1 aspartate-semialdehyde dehydrogenase PSPTO_2176 201 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 28870144 Common - site-specific recombinase, phage integrase family PSPTO_2966 200 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28868698 Common - hypothetical protein PSPTO_1491 35 COG2979 COG2979, Uncharacterized protein conserved in bacteria Function unknown 28871470 Common - moxR protein, putative PSPTO_4333 178 COG0714 COG0714, MoxR-like ATPases General function prediction only 162533076 Common leuA 2-isopropylmalate synthase PSPTO_1444 211 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 28870744 Common - sensory box histidine kinase/response regulator PSPTO_3584 215 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28868462 Common - hypothetical protein PSPTO_1251 17 COG4259 COG4259, Uncharacterized protein conserved in bacteria Function unknown 28868921 Common cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase PSPTO_1715 118 COG2038 CobT, NaMN:DMB phosphoribosyltransferase Coenzyme metabolism 28869614 Common - regulatory protein, putative PSPTO_2419 102 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28869626 Common - hypothetical protein PSPTO_2431 4 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 28867829 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_0601 236 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28869120 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III, putative PSPTO_1916 219 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 28868097 Pathogen hopQ1-1 type III effector HopQ1-1 PSPTO_0877 4 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 28871433 Common - metabolite-proton symporter, putative PSPTO_4296 151 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28871692 Common - dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative PSPTO_4558 202 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28872503 Common - hypothetical protein PSPTO_5395 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 28870727 Pathogen - hypothetical protein PSPTO_3567 3 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 28868349 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_1134 171 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28872349 Common - tonB domain protein PSPTO_5237 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28869096 Common - hypothetical protein PSPTO_1892 111 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28871558 Common sspB ClpXP protease specificity-enhancing factor PSPTO_4423 65 COG2969 SspB, Stringent starvation protein B General function prediction only 28871923 Common lnt apolipoprotein N-acyltransferase PSPTO_4808 166 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 28867295 Pathogen - hypothetical protein PSPTO_0054 1 None None None 28867362 Pathogen - hypothetical protein PSPTO_0122 1 None None None 28872484 Common - transcriptional regulator, GntR family PSPTO_5376 125 COG1802 GntR, Transcriptional regulators Transcription 28869217 Pathogen - hypothetical protein PSPTO_2013 1 None None None 28870128 Common xylcC benzaldehyde dehydrogenase (NAD+) PSPTO_2950 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28869883 Common - hypothetical protein PSPTO_2695 19 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28868066 Common - ISPsy5, Orf1 PSPTO_0842 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869158 Common fleQ transcriptional regulator FleQ PSPTO_1954 171 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868521 Pathogen - hypothetical protein PSPTO_1311 1 None None None 28869790 Common irp1 yersiniabactin polyketide/non-ribosomal peptide synthetase PSPTO_2600 209 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28868409 Common - UDP-N-acetylglucosamine 2-epimerase PSPTO_1196 153 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 28872656 Common - ABC transporter, permease protein PSPTO_5551 136 COG4986 COG4986, ABC-type anion transport system, duplicated permease component Inorganic ion transport and metabolism 28868158 Common - hypothetical protein PSPTO_0938 28 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 28867477 Common - acetyltransferase, GNAT family PSPTO_0245 30 COG2153 ElaA, Predicted acyltransferase General function prediction only 28870617 Common - 3-oxoacid CoA-transferase, subunit B family PSPTO_3456 102 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 28870646 Common - lipase family protein PSPTO_3485 18 COG3675 COG3675, Predicted lipase Lipid metabolism 28871655 Common - hypothetical protein PSPTO_4521 31 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 28871720 Pathogen hopS2 type III effector HopS2 PSPTO_4588 1 None None None 28871169 Common dgkA diacylglycerol kinase PSPTO_4026 69 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 28869520 Common - hypothetical protein PSPTO_2320 1 None None None 28867774 Common - hypothetical protein PSPTO_0546 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 28871677 Common - GAF domain/GGDEF domain/EAL domain protein PSPTO_4543 172 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 28867582 Common ntrC nitrogen regulation protein NR(I) PSPTO_0352 225 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28871337 Common - hypothetical protein PSPTO_4195 36 COG4628 COG4628, Uncharacterized conserved protein Function unknown 28871472 Common - hypothetical protein PSPTO_4335 1 None None None 28869961 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_2775 167 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869180 Common flhA flagellar biosynthesis protein A PSPTO_1976 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 28869661 Common - hypothetical protein PSPTO_2468 3 COG3313 COG3313, Predicted Fe-S protein General function prediction only 28867961 Common - MORN repeat family protein PSPTO_0733 35 COG4642 COG4642, Uncharacterized protein conserved in bacteria Function unknown 28871519 Common - ampG protein, putative PSPTO_4383 109 None None None 28867966 Common - lipoprotein, putative PSPTO_0738 5 None None None 28870441 Common - hypothetical protein PSPTO_3277 50 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 28870099 Common - hypothetical protein PSPTO_2920 99 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 28868329 Common - hypothetical protein PSPTO_1114 11 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 28872258 Common phaD transcriptional regulator PhaD PSPTO_5146 53 COG1309 AcrR, Transcriptional regulator Transcription 28867260 Common - transposase/IS protein PSPTO_0018 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28867329 Common rpmB 50S ribosomal protein L28 PSPTO_0089 172 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 28870814 Common - transcriptional regulator, GntR family PSPTO_3659 114 COG1802 GntR, Transcriptional regulators Transcription 28868515 Common - GGDEF domain protein PSPTO_1305 178 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28868108 Common - sugar ABC transporter, permease protein PSPTO_0888 145 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 28871377 Common - hypothetical protein PSPTO_4235 26 COG3180 AbrB, Putative ammonia monooxygenase General function prediction only 28872339 Common - 5-formyltetrahydrofolate cyclo-ligase family protein PSPTO_5227 82 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 28872410 Pathogen - hypothetical protein PSPTO_5298 1 None None None 28869885 Common - oxidoreductase, zinc-binding PSPTO_2697 184 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 28867871 Common rpsE 30S ribosomal protein S5 PSPTO_0643 246 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 28869786 Common pchB isochorismate-pyruvate lyase PSPTO_2596 36 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 28870544 Common - sensor histidine kinase PSPTO_3380 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870090 Common - mandelate racemase/muconate lactonizing enzyme family protein PSPTO_2911 121 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 28871973 Common dipZ thiol:disulfide interchange protein precursor PSPTO_4858 77 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 28872332 Common - transcriptional regulator, AraC family PSPTO_5220 63 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28869324 Common - RulA protein, putative PSPTO_2121 69 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28868536 Common cyoD cytochrome o ubiquinol oxidase, subunit IV PSPTO_1328 60 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 28869747 Common phnD phosphonates ABC transporter, periplasmic phosphonates-binding protein PSPTO_2556 86 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 28872458 Pathogen - hypothetical protein PSPTO_5346 2 None None None 28867284 Common - cytidine/deoxycytidylate deaminase family protein PSPTO_0043 32 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 28869349 Common - pyoverdine biosynthesis regulatory gene, putative PSPTO_2146 23 COG2175 TauD, Probable taurine catabolism dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 28871979 Common - TIM-barrel protein, putative, NifR3 family PSPTO_4864 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 28870334 Common - enoyl-CoA hydratase/isomerase family protein PSPTO_3163 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 28868724 Common - hypothetical protein PSPTO_1518 25 None None None 28868639 Common pilF type IV pilus biogenesis protein PilF PSPTO_1432 108 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 28869511 Common - methylase, putative PSPTO_2311 161 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 28867676 Common - hypothetical protein PSPTO_0446 50 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 28872315 Common - hypothetical protein PSPTO_5203 8 None None None 28868026 Common rpmA 50S ribosomal protein L27 PSPTO_0798 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 28871813 Common cfa3 coronafacic acid beta-ketoacyl synthetase component PSPTO_4683 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28868543 Common - cyclohexadienyl dehydratase, putative PSPTO_1335 118 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869995 Common - hypothetical protein PSPTO_2809 21 COG2072 TrkA, Predicted flavoprotein involved in K+ transport Inorganic ion transport and metabolism 28869656 Common - TonB-dependent siderophore receptor, putative PSPTO_2463 121 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28872675 Common - ISPsy7, transposase PSPTO_5571 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872325 Common - ISPsy5, Orf1 PSPTO_5213 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871316 Common - amino acid ABC transporter, ATP-binding protein PSPTO_4174 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28868101 Common - hypothetical protein PSPTO_0881 28 COG3505 VirD4, Type IV secretory pathway, VirD4 components Intracellular trafficking and secretion 28868258 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase PSPTO_1041 228 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 28871122 Common ruvB Holliday junction DNA helicase B PSPTO_3977 213 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 28867447 Common - hypothetical protein PSPTO_0215 1 COG2960 COG2960, Uncharacterized protein conserved in bacteria Function unknown 28871356 Common pdxJ pyridoxal phosphate biosynthetic protein PdxJ PSPTO_4214 139 COG0854 PdxJ, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 28871495 Common - hypothetical protein PSPTO_4359 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 28868731 Common - ThiF family protein PSPTO_1525 163 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 28871098 Common - metallo-beta-lactamase superfamily protein PSPTO_3951 63 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 28871480 Common - insecticidal toxin protein, putative PSPTO_4344 64 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28870498 Common - transcriptional regulator, LysR family PSPTO_3334 191 COG0583 LysR, Transcriptional regulator Transcription 28870343 Common - hypothetical protein PSPTO_3172 86 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 28867653 Common - proteic killer protein, putative PSPTO_0423 40 COG3549 HigB, Plasmid maintenance system killer protein General function prediction only 28870380 Common - ISPsy5, transposase PSPTO_3213 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867486 Common - pyridine nucleotide-disulphide oxidoreductase family protein PSPTO_0254 141 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 28868853 Pathogen - lipoprotein, putative PSPTO_1647 1 None None None 28868176 Common - phosphotransferase system, fructose-specific IIBC component PSPTO_0956 68 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 28871549 Common - penicillin-binding protein PSPTO_4414 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 28870834 Common - membrane protein PSPTO_3679 47 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 28872151 Common - hypothetical protein PSPTO_5037 128 COG1678 COG1678, Putative transcriptional regulator Transcription 28869245 Common - hypothetical protein PSPTO_2041 1 None None None 28871643 Common omlA outer membrane lipoprotein OmlA PSPTO_4509 64 COG2913 SmpA, Small protein A (tmRNA-binding) Translation, ribosomal structure and biogenesis 28870524 Common purB adenylosuccinate lyase PSPTO_3360 233 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 28869038 Common aruF arginine N-succinyltransferase, alpha subunit PSPTO_1833 37 COG3138 AstA, Arginine/ornithine N-succinyltransferase beta subunit Amino acid transport and metabolism 28867754 Common - lipoprotein, putative PSPTO_0525 6 None None None 28867331 Common - hypothetical protein PSPTO_0091 32 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 28872065 Common - ribosome-associated GTPase PSPTO_4951 163 COG1162 COG1162, Predicted GTPases General function prediction only 28868184 Common - sigma-54 dependent transcriptional regulator/response regulator PSPTO_0964 221 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28871718 Common - hypothetical protein PSPTO_4586 15 None None None 28871359 Common rnc ribonuclease III PSPTO_4217 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 28867941 Common - hypothetical protein PSPTO_0713 5 None None None 28871185 Common - hypothetical protein PSPTO_4042 5 None None None 28870305 Common - hypothetical protein PSPTO_3132 27 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 28869494 Common - ribonuclease activity regulator protein RraA PSPTO_2294 93 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 28867251 Common - type I site-specific deoxyribonuclease, HsdR family PSPTO_0008 134 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 28868632 Common iscA iron-binding protein IscA PSPTO_1425 164 COG0316 IscA, Uncharacterized conserved protein Function unknown 28869250 Common - ARD/ARD' family protein PSPTO_2046 37 COG1791 COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 28871682 Common - MFS transporter, phthalate permease family PSPTO_4548 202 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28868438 Common - ISPsy5, Orf1 PSPTO_1226 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872376 Common - lipoprotein, putative PSPTO_5264 1 None None None 28870485 Common bar phosphinothricin N-acetyltransferase PSPTO_3321 114 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 28869668 Common - methyl-accepting chemotaxis protein PSPTO_2475 145 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870653 Common - oxidoreductase, Gfo/Idh/MocA family PSPTO_3492 163 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 28872238 Common - hypothetical protein PSPTO_5125 16 COG3267 ExeA, Type II secretory pathway, component ExeA (predicted ATPase) Intracellular trafficking and secretion 28870820 Common - hypothetical protein PSPTO_3665 63 COG2351 COG2351, Transthyretin-like protein General function prediction only 28872301 Common metI-1 D-methionine ABC transporter, permease protein PSPTO_5189 190 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 28867824 Common crp cAMP-regulatory protein PSPTO_0596 155 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 28867664 Common thiG thiazole synthase PSPTO_0434 166 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 28871294 Common - ISPssy, transposase PSPTO_4152 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867525 Pathogen - hypothetical protein PSPTO_0294 1 None None None 28867878 Common rpsD 30S ribosomal protein S4 PSPTO_0650 222 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 28872283 Common - N-formimino-L-glutamate deiminase PSPTO_5171 106 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 28871840 Pathogen - hypothetical protein PSPTO_4716 1 None None None 28872120 Common aceF dihydrolipoamide acetyltransferase PSPTO_5006 199 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 28868193 Common deoC deoxyribose-phosphate aldolase PSPTO_0973 130 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 28871384 Common - hypothetical protein PSPTO_4242 57 COG3665 COG3665, Uncharacterized conserved protein Function unknown 28869951 Common - hypothetical protein PSPTO_2765 56 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 28871231 Common - hydrolase, alpha/beta fold family PSPTO_4089 206 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28870972 Common - hypothetical protein PSPTO_3818 36 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 28871431 Common hscC chaperone protein HscC PSPTO_4294 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 28867412 Pathogen - hypothetical protein PSPTO_0172 1 None None None 28869828 Common araG L-arabinose transporter ATP-binding protein PSPTO_2639 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 28867248 Common - type I restriction-modification system, M subunit, putative PSPTO_0005 163 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 28869466 Common - permease, putative PSPTO_2266 86 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 28872263 Common - hypothetical protein PSPTO_5151 28 COG3165 COG3165, Uncharacterized protein conserved in bacteria Function unknown 28868384 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSPTO_1171 134 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 28870491 Common solA N-methyltryptophan oxidase PSPTO_3327 55 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28869315 Common queF 7-cyano-7-deazaguanine reductase PSPTO_2112 105 COG2904 COG2904, Uncharacterized protein conserved in bacteria Function unknown 28868142 Common - zinc-binding protein PSPTO_0922 64 COG3024 COG3024, Uncharacterized protein conserved in bacteria Function unknown 28872130 Common - proline permease PSPTO_5016 178 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 28871110 Common - ISPssy, transposase PSPTO_3963 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872022 Common - transcriptional regulator, TetR family PSPTO_4908 40 COG1309 AcrR, Transcriptional regulator Transcription 28868125 Pathogen hopAH1 type III effector HopAH1 PSPTO_0905 1 None None None 28870219 Common - ISPsy12, transposase OrfB PSPTO_3044 142 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872580 Common - chorismate-pyruvate lyase, putative PSPTO_5475 43 COG3161 UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) Coenzyme metabolism 28867403 Common - hypothetical protein PSPTO_0163 17 COG3805 DodA, Aromatic ring-cleaving dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 28868619 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase PSPTO_1412 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 28870963 Common - ISPsy6, transposase PSPTO_3808 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870277 Pathogen - hypothetical protein PSPTO_3104 1 None None None 28870188 Common - amino acid ABC transporter, permease protein PSPTO_3010 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28871632 Common - FtsJ cell division protein PSPTO_4498 138 COG0293 FtsJ, 23S rRNA methylase Translation, ribosomal structure and biogenesis 28868626 Common suhB inositol-1-monophosphatase PSPTO_1419 202 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 28870474 Common - general secretion pathway protein L, putative PSPTO_3310 10 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 28870197 Common - transcriptional regulator, LysR family PSPTO_3021 169 COG0583 LysR, Transcriptional regulator Transcription 28868673 Common - hypothetical protein PSPTO_1466 37 COG3313 COG3313, Predicted Fe-S protein General function prediction only 28869047 Common alaS alanyl-tRNA synthetase PSPTO_1842 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28870954 Common fsr fosmidomycin resistance protein PSPTO_3799 98 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872611 Common - acetyltransferase, GNAT family PSPTO_5506 69 COG0456 RimI, Acetyltransferases General function prediction only 28870202 Common - hypothetical protein PSPTO_3026 5 None None None 28868317 Common pth peptidyl-tRNA hydrolase PSPTO_1102 215 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 28869971 Common - putrescine ABC transporter, periplasmic putrescine-binding protein PSPTO_2785 129 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 28868031 Pathogen - hypothetical protein PSPTO_0803 1 None None None 28871255 Common - lipoprotein, putative PSPTO_4113 2 COG3650 COG3650, Predicted membrane protein Function unknown 28867652 Common - virulence-associated protein, putative PSPTO_0422 66 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 28870448 Common - major facilitator family transporter PSPTO_3284 88 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28867469 Common hslR heat shock protein 15 PSPTO_0237 101 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 28869137 Common flgB flagellar basal body rod protein FlgB PSPTO_1933 78 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 28872185 Common - cytochrome b561, putative PSPTO_5072 89 COG3038 CybB, Cytochrome B561 Energy production and conversion 28871068 Common - hypothetical protein PSPTO_3916 22 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 28869088 Common - hypothetical protein PSPTO_1884 11 COG3403 COG3403, Uncharacterized conserved protein Function unknown 28870255 Common - NADH:flavin oxidoreductase / NADH oxidase family PSPTO_3080 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28870158 Common - oxidoreductase, 2OG-Fe(II) oxygenase family PSPTO_2980 55 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 28868322 Common - TPR domain protein PSPTO_1107 138 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 28869127 Common - hypothetical protein PSPTO_1923 4 COG5581 COG5581, Predicted glycosyltransferase Cell envelope biogenesis, outer membrane 28869053 Common - hypothetical protein PSPTO_1848 1 None None None 28867481 Common - peptide ABC transporter, periplasmic peptide-binding protein PSPTO_0249 191 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28867793 Common - polyamine ABC transporter, permease protein PSPTO_0565 201 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 28869233 Common - oxidoreductase, zinc-binding PSPTO_2029 107 COG2130 COG2130, Putative NADP-dependent oxidoreductases General function prediction only 28870649 Common - sugar ABC transporter, permease protein PSPTO_3488 111 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 28868982 Common - hypothetical protein PSPTO_1776 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 28867556 Common gshA glutamate--cysteine ligase PSPTO_0325 58 COG2918 GshA, Gamma-glutamylcysteine synthetase Coenzyme metabolism 28871666 Common - hypothetical protein PSPTO_4532 2 None None None 28868116 Common - sensor histidine kinase/response regulator PSPTO_0896 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28867844 Common rplA 50S ribosomal protein L1 PSPTO_0616 245 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 28868090 Common - hypothetical protein PSPTO_0869 17 None None None 28870296 Common - hypothetical protein PSPTO_3123 1 None None None 28872036 Common nadE NAD synthetase PSPTO_4922 181 COG0171 NadE, NAD synthase Coenzyme metabolism 28867638 Common - hypothetical protein PSPTO_0408 39 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 28869414 Common - sensor histidine kinase/response regulator PSPTO_2212 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870050 Common - hypothetical protein PSPTO_2868 16 COG4320 COG4320, Uncharacterized protein conserved in bacteria Function unknown 28870325 Common - hypothetical protein PSPTO_3152 16 COG5446 COG5446, Predicted integral membrane protein Function unknown 28870514 Common aat leucyl/phenylalanyl-tRNA--protein transferase PSPTO_3350 134 COG2360 Aat, Leu/Phe-tRNA-protein transferase Posttranslational modification, protein turnover, chaperones 28868764 Common adhC alcohol dehydrogenase, class III PSPTO_1558 198 COG1062 AdhC, Zn-dependent alcohol dehydrogenases, class III Energy production and conversion 28872604 Common aspA aspartate ammonia-lyase PSPTO_5499 221 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 28871187 Common - hypothetical protein PSPTO_4044 2 None None None 28871027 Common minE cell division topological specificity factor MinE PSPTO_3874 86 COG0851 MinE, Septum formation topological specificity factor Cell division and chromosome partitioning 28869388 Common etfA-2 electron transfer flavoprotein, alpha subunit PSPTO_2186 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 28870176 Common - hypothetical protein PSPTO_2998 8 None None None 28870404 Common tolR-1 tolR protein PSPTO_3239 134 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28867314 Common rpoZ DNA-directed RNA polymerase subunit omega PSPTO_0074 114 COG1758 RpoZ, DNA-directed RNA polymerase, subunit K/omega Transcription 28872125 Common - acetyltransferase, GNAT family PSPTO_5011 88 COG2153 ElaA, Predicted acyltransferase General function prediction only 28869933 Common - OmpA family protein PSPTO_2746 127 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 28869148 Common flgK flagellar hook-associated protein FlgK PSPTO_1944 124 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 28868707 Common lysS lysyl-tRNA synthetase PSPTO_1501 246 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 28869525 Pathogen - hypothetical protein PSPTO_2325 1 None None None 28869778 Common - bacterial luciferase family protein PSPTO_2588 124 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28869865 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_2677 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868973 Common ohr organic hydroperoxide resistance protein PSPTO_1767 94 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 28872682 Common - hypothetical protein PSPTO_5581 18 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872698 Common atpD F0F1 ATP synthase subunit beta PSPTO_5599 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 28867570 Common - GGDEF domain protein PSPTO_0339 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28867980 Common - copZ protein, putative PSPTO_0752 34 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 28868662 Common - hypothetical protein PSPTO_1455 93 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 28869670 Common - endoribonuclease L-PSP family protein PSPTO_2477 47 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28867681 Common - hypothetical protein PSPTO_0451 28 COG4067 COG4067, Uncharacterized protein conserved in archaea Posttranslational modification, protein turnover, chaperones 28867869 Common rplF 50S ribosomal protein L6 PSPTO_0641 240 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 28867915 Common - hypothetical protein PSPTO_0687 37 COG3897 COG3897, Predicted methyltransferase General function prediction only 28868397 Common - hypothetical protein PSPTO_1184 26 COG3224 COG3224, Uncharacterized protein conserved in bacteria Function unknown 28870985 Common acpP acyl carrier protein PSPTO_3831 181 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28872678 Common - transposase/IS protein PSPTO_5576 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28867900 Common exbD-2 TonB system transport protein ExbD PSPTO_0672 142 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28870756 Common - hypothetical protein PSPTO_3596 99 COG0672 FTR1, High-affinity Fe2+/Pb2+ permease Inorganic ion transport and metabolism 28871149 Common - tail fiber protein H, putative PSPTO_4006 15 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 28871982 Common purD phosphoribosylamine--glycine ligase PSPTO_4867 231 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 28869740 Common - sigma-54 dependent transcriptional regulator PSPTO_2549 173 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 28867950 Common ppa-1 inorganic pyrophosphatase PSPTO_0722 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 28871447 Common pcaR Pca regulon regulatory protein PcaR PSPTO_4310 120 COG1414 IclR, Transcriptional regulator Transcription 28869434 Common - hypothetical protein PSPTO_2232 1 None None None 28868167 Common - hypothetical protein PSPTO_0947 74 COG2013 COG2013, Uncharacterized conserved protein Function unknown 28868423 Common - hypothetical protein PSPTO_1210 17 None None None 28867750 Pathogen - DNA-binding protein PSPTO_0521 1 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 28868548 Common - carbonic anhydrase PSPTO_1340 130 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 28871533 Common - glutathione S-transferase family protein PSPTO_4398 66 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28870001 Common - alkylhydroperoxidase AhpD domain protein PSPTO_2816 59 COG2128 COG2128, Uncharacterized conserved protein Function unknown 28871989 Common - CbiG protein/precorrin-3B C17-methyltransferase PSPTO_4874 117 COG1010 CobJ, Precorrin-3B methylase Coenzyme metabolism 28869249 Common - hypothetical protein PSPTO_2045 124 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 28870745 Common - hypothetical protein PSPTO_3585 3 None None None 28870907 Common acnB bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase PSPTO_3752 213 COG1049 AcnB, Aconitase B Energy production and conversion 28872451 Common tyrB aromatic amino acid aminotransferase PSPTO_5339 73 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28870476 Common - general secretion pathway protein J, putative PSPTO_3312 6 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 28868729 Common dapE succinyl-diaminopimelate desuccinylase PSPTO_1523 202 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28870625 Common ligD ATP-dependent DNA ligase PSPTO_3464 111 COG3285 COG3285, Predicted eukaryotic-type DNA primase DNA replication, recombination, and repair 28868295 Common rfbD dTDP-4-dehydrorhamnose reductase PSPTO_1080 165 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 28868059 Common - ISPsy4, transposase PSPTO_0833 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 90818608 Pathogen - PSPTO5620 PSPTO_5620 1 None None None 28871902 Common - methyl-accepting chemotaxis protein PSPTO_4786 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28872044 Common rplI 50S ribosomal protein L9 PSPTO_4930 193 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 28871489 Common - hypothetical protein PSPTO_4353 61 COG3176 COG3176, Putative hemolysin General function prediction only 28867988 Common fecE iron-dicitrate transporter ATP-binding subunit PSPTO_0760 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 28872007 Common - phosphinothricin N-acetyltransferase, putative PSPTO_4892 122 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 28868290 Common - O-antigen ABC transporter, ATP-binding protein, putative PSPTO_1075 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 28870655 Common iolG myo-inositol 2-dehydrogenase PSPTO_3494 165 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 28872000 Common - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_4885 107 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28869844 Common - aldehyde oxidase and xanthine dehydrogenase family protein PSPTO_2656 120 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 28871280 Common - amino acid ABC transporter, permease protein PSPTO_4138 172 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 28871850 Common - transposase/IS protein PSPTO_4729 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28872671 Common - transposition protein, TnsD-related protein PSPTO_5566 16 None None None 28868777 Pathogen - hypothetical protein PSPTO_1571 1 None None None 28869002 Common - sulfonate ABC transporter, permease protein, putative PSPTO_1796 201 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 28868994 Common - ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family PSPTO_1788 90 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28871961 Common - hypothetical protein PSPTO_4846 3 None None None 28868203 Common ilvC ketol-acid reductoisomerase PSPTO_0983 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 28868262 Common - virulence-associated protein, putative PSPTO_1045 60 COG1487 VapC, Predicted nucleic acid-binding protein, contains PIN domain General function prediction only 28872537 Pathogen - hypothetical protein PSPTO_5429 1 None None None 28868380 Common - hypothetical protein PSPTO_1167 10 COG5620 COG5620, Uncharacterized conserved protein Function unknown 28872274 Common mdoG glucan biosynthesis protein G PSPTO_5162 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 28871236 Common - 3-oxoacyl-(acyl carrier protein) synthase III PSPTO_4094 201 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 28871859 Common - site-specific recombinase, phage integrase family PSPTO_4742 7 None None None 28868578 Pathogen hopN1 type III effector HopN1 PSPTO_1370 1 None None None 28871669 Common - peptide ABC transporter, ATP-binding protein PSPTO_4535 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 28868122 Common - ISPssy, transposase PSPTO_0902 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872510 Common nudE ADP-ribose diphosphatase NudE PSPTO_5402 152 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 28868001 Common - transcriptional regulator, LysR family PSPTO_0773 30 COG0583 LysR, Transcriptional regulator Transcription 28870318 Common - hypothetical protein PSPTO_3145 1 None None None 28872631 Common - cobalamin synthesis protein/P47K family protein PSPTO_5526 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 28871743 Common - hypothetical protein PSPTO_4611 84 COG3391 COG3391, Uncharacterized conserved protein Function unknown 28872216 Common - hypothetical protein PSPTO_5103 2 None None None 28867763 Common - site-specific recombinase, phage integrase family PSPTO_0535 122 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28871153 Common - repressor protein cI PSPTO_4010 20 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28871614 Common - hypothetical protein PSPTO_4479 109 COG0679 COG0679, Predicted permeases General function prediction only 28867787 Common - sensory box histidine kinase PSPTO_0559 168 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 28867959 Common - lipoprotein, putative PSPTO_0731 1 COG5645 COG5645, Predicted periplasmic lipoprotein General function prediction only 28871176 Common recA recombinase A PSPTO_4033 214 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 28872636 Pathogen - hypothetical protein PSPTO_5531 1 None None None 28870706 Common - ThiJ/PfpI family protein PSPTO_3545 99 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 28870520 Common - isocitrate dehydrogenase, NADP-dependent PSPTO_3356 65 COG2838 Icd, Monomeric isocitrate dehydrogenase Energy production and conversion 28867488 Common argE-1 acetylornithine deacetylase PSPTO_0256 216 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28871928 Common - lipoprotein, putative PSPTO_4813 36 COG2980 RlpB, Rare lipoprotein B Cell envelope biogenesis, outer membrane 28868659 Pathogen - hypothetical protein PSPTO_1452 1 None None None 28868913 Common - L-sorbosone dehydrogenase PSPTO_1707 64 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 28871766 Common - N-acetylmuramoyl-L-alanine amidase, putative PSPTO_4634 2 None None None 28869242 Common - hypothetical protein PSPTO_2038 1 None None None 28872591 Common - phosphate ABC transporter, permease protein, putative PSPTO_5486 218 COG4590 COG4590, ABC-type uncharacterized transport system, permease component General function prediction only 28869757 Common phnN ATP-binding protein PhnN PSPTO_2566 53 COG3709 COG3709, Uncharacterized component of phosphonate metabolism Inorganic ion transport and metabolism 28869288 Pathogen - hypothetical protein PSPTO_2084 1 None None None 28867813 Pathogen - hypothetical protein PSPTO_0585 1 None None None 28871102 Common - AhpC/Tsa family protein PSPTO_3955 218 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 28871039 Common - hypothetical protein PSPTO_3887 4 None None None 28869944 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_2758 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868823 Common - major facilitator family transporter PSPTO_1617 110 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869444 Common kdpA potassium-transporting ATPase subunit A PSPTO_2242 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 28869727 Pathogen - hypothetical protein PSPTO_2534 1 None None None 28868508 Common - hypothetical protein PSPTO_1298 52 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 28868770 Common - lipoprotein NlpD, putative PSPTO_1564 190 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 28870549 Common - site-specific recombinase, phage integrase family PSPTO_3385 126 COG0582 XerC, Integrase DNA replication, recombination, and repair 28870735 Common - hypothetical protein PSPTO_3575 3 None None None 28868498 Common edd phosphogluconate dehydratase PSPTO_1288 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 28871686 Pathogen - hypothetical protein PSPTO_4552 1 None None None 28867483 Common - peptide ABC transporter, permease protein PSPTO_0251 217 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28867909 Common - permease, putative PSPTO_0681 33 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 28867418 Common fmt methionyl-tRNA formyltransferase PSPTO_0178 222 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 28869658 Common - ISPsy7, transposase PSPTO_2465 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867579 Common - xenobiotic compound monooxygenase, DszA family, A subunit PSPTO_0349 71 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28868173 Common - DNA-binding transcriptional regulator FruR PSPTO_0953 121 COG1609 PurR, Transcriptional regulators Transcription 28868212 Common rimI ribosomal-protein-alanine acetyltransferase PSPTO_0992 166 COG0456 RimI, Acetyltransferases General function prediction only 28869716 Common - ABC transporter, permease protein PSPTO_2523 200 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 28867293 Common - hypothetical protein PSPTO_0052 3 None None None 28867711 Common - ACT domain protein PSPTO_0481 29 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 28872473 Common - hypothetical protein PSPTO_5362 1 None None None 28872666 Common - iron-compound ABC transporter, ATP-binding protein, putative PSPTO_5561 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 28869067 Common - oxidoreductase, zinc-binding PSPTO_1862 192 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28870829 Common - transcriptional regulator, AsnC family PSPTO_3674 137 COG1522 Lrp, Transcriptional regulators Transcription 28870204 Common ppiC-1 peptidyl-prolyl cis-trans isomerase C PSPTO_3028 147 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 28867407 Pathogen - hypothetical protein PSPTO_0167 1 None None None 28867301 Pathogen hopY1 type III effector HopY1 PSPTO_0061 1 None None None 28870395 Common - filamentous hemagglutinin, intein-containing, putative PSPTO_3229 122 COG2911 COG2911, Uncharacterized protein conserved in bacteria Function unknown 28871287 Common capB cold shock protein CapB PSPTO_4145 178 COG1278 CspC, Cold shock proteins Transcription 28872250 Common priA primosome assembly protein PriA PSPTO_5137 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 28868636 Common - hypothetical protein PSPTO_1429 43 COG2975 COG2975, Uncharacterized protein conserved in bacteria Function unknown 28867607 Common - metal ion efflux outer membrane protein, putative PSPTO_0377 90 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28867597 Common - hypothetical protein PSPTO_0367 1 None None None 28870200 Common gacA DNA-binding response regulator GacA PSPTO_3024 217 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28869815 Common - transcriptional regulator, LysR family PSPTO_2626 185 COG0583 LysR, Transcriptional regulator Transcription 28872429 Common - antioxidant, AhpC/Tsa family PSPTO_5317 209 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 28870677 Common fadA 3-ketoacyl-CoA thiolase PSPTO_3516 177 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 28868501 Common - sensor histidine kinase PSPTO_1291 203 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871673 Common - transcriptional regulator, LuxR family, autoinducer-regulated PSPTO_4539 83 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28870555 Common - tail protein X PSPTO_3391 12 COG5004 COG5004, P2-like prophage tail protein X General function prediction only 28870113 Common - urea amidolyase-related protein PSPTO_2934 114 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 28871469 Common - hypothetical protein PSPTO_4332 92 COG0433 COG0433, Predicted ATPase General function prediction only 28869631 Common - ISPsy5, Orf1 PSPTO_2436 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872496 Common - bifunctional antitoxin/transcriptional repressor RelB PSPTO_5388 10 COG3077 RelB, DNA-damage-inducible protein J DNA replication, recombination, and repair 28869910 Common - short chain dehydrogenase PSPTO_2723 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868825 Common - hypothetical protein PSPTO_1619 1 None None None 28871879 Common - hypothetical protein PSPTO_4763 11 None None None 28870810 Common - hypothetical protein PSPTO_3655 31 COG4307 COG4307, Uncharacterized protein conserved in bacteria Function unknown 28870239 Common - aldehyde dehydrogenase family protein PSPTO_3064 221 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28871009 Common - glutathione S-transferase family protein PSPTO_3856 100 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28868440 Common - ISPssy, transposase PSPTO_1229 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867937 Common - hypothetical protein PSPTO_0709 12 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 28867643 Common - hypothetical protein PSPTO_0413 56 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 28870762 Common - hypothetical protein PSPTO_3602 10 None None None 28870031 Common - ThiJ/PfpI family protein PSPTO_2847 72 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28871509 Common colS sensor histidine kinase ColS PSPTO_4373 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870606 Common - glycosyl transferase, group 2 family protein PSPTO_3445 26 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 28870310 Common - transcriptional regulator, LysR family PSPTO_3137 164 COG0583 LysR, Transcriptional regulator Transcription 28871882 Common - hypothetical protein PSPTO_4766 3 None None None 28871424 Common - binary cytotoxin component PSPTO_4287 3 None None None 28870767 Common - transposase/IS protein PSPTO_3607 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28867862 Common rpmC 50S ribosomal protein L29 PSPTO_0634 140 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 28869709 Common moaA molybdenum cofactor biosynthesis protein A PSPTO_2516 198 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 28872335 Common pepP Xaa-Pro aminopeptidase PSPTO_5223 235 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 28867708 Common - hypothetical protein PSPTO_0478 6 None None None 28867414 Common - SUA5/yciO/yrdC family domain protein PSPTO_0174 233 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 28869603 Common - hypothetical protein PSPTO_2407 46 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 28868935 Common - hypothetical protein PSPTO_1729 23 COG2962 RarD, Predicted permeases General function prediction only 28870065 Common - ISPsy5, Orf1 PSPTO_2885 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869018 Common - hypothetical protein PSPTO_1812 141 COG1354 COG1354, Uncharacterized conserved protein Function unknown 28871757 Common - ISPsy4, transposase PSPTO_4625 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871004 Pathogen - hypothetical protein PSPTO_3851 1 None None None 28869855 Common - spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative PSPTO_2667 70 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 28871044 Common - hypothetical protein PSPTO_3892 10 None None None 28872224 Common - transcriptional regulator, LysR family PSPTO_5111 192 COG0583 LysR, Transcriptional regulator Transcription 28871504 Common - lipoprotein, putative PSPTO_4368 21 COG3489 COG3489, Predicted periplasmic lipoprotein General function prediction only 28870964 Common - oxidoreductase PSPTO_3809 235 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868058 Common - transposase/IS protein PSPTO_0832 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28872232 Common - hypothetical protein PSPTO_5119 1 None None None 28871133 Common proS prolyl-tRNA synthetase PSPTO_3988 248 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28870928 Common - transcriptional regulator, GntR family PSPTO_3773 118 COG2186 FadR, Transcriptional regulators Transcription 28869296 Pathogen - tail fiber domain protein PSPTO_2092 3 None None None 28869986 Common - polysaccharide deacetylase family protein PSPTO_2800 15 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 28867497 Common - peptide ABC transporter, permease protein PSPTO_0265 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 28867834 Common anmK anhydro-N-acetylmuramic acid kinase PSPTO_0606 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 28869515 Common - hypothetical protein PSPTO_2315 28 COG3171 COG3171, Uncharacterized protein conserved in bacteria Function unknown 28867276 Common - recombinase, putative PSPTO_0034 50 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 28870428 Common - hydrolase, alpha/beta fold family PSPTO_3264 148 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28867441 Common lsyA-1 diaminopimelate decarboxylase PSPTO_0209 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 28872188 Common bioA adenosylmethionine--8-amino-7-oxononanoate transaminase PSPTO_5075 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 28868926 Common - outer membrane protein PSPTO_1720 88 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 28872275 Common dtd D-tyrosyl-tRNA deacylase PSPTO_5163 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 28868941 Common - hypothetical protein PSPTO_1735 32 COG3531 COG3531, Predicted protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 28869770 Common - carbonic anhydrase-related protein PSPTO_2579 187 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 28869385 Common - oxidoreductase, zinc-binding PSPTO_2182 188 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 28871083 Common - lysozyme, putative PSPTO_3933 37 COG3179 COG3179, Predicted chitinase General function prediction only 28869099 Common - hypothetical protein PSPTO_1895 15 COG5591 COG5591, Uncharacterized conserved protein Function unknown 28871091 Pathogen - hypothetical protein PSPTO_3944 1 None None None 28870213 Common - transcriptional regulator, putative PSPTO_3037 141 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 28869574 Common - hypothetical protein PSPTO_2377 1 None None None 28868287 Common - aminotransferase, DegT/DnrJ/EryC1/StrS family PSPTO_1072 192 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 28871397 Common - 4-oxalocrotonate tautomerase family protein PSPTO_4257 14 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 28872118 Common glnE glutamate-ammonia-ligase adenylyltransferase PSPTO_5004 119 COG1391 GlnE, Glutamine synthetase adenylyltransferase Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms 28872439 Common gpmA phosphoglyceromutase PSPTO_5327 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 28869838 Common - hypothetical protein PSPTO_2649 57 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 28871860 Common - hypothetical protein PSPTO_4743 2 None None None 28869850 Common - tartrate dehydrogenase PSPTO_2662 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 28867776 Common glpE thiosulfate sulfurtransferase PSPTO_0548 105 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 28870048 Common - cupin family protein PSPTO_2866 66 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 28868245 Common - cellulose synthase regulator protein PSPTO_1028 21 None None None 28871340 Common - cobalamin synthesis protein/P47K family protein PSPTO_4198 126 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 28870877 Common - peptidyl-prolyl cis-trans isomerase D, putative PSPTO_3722 171 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 28870561 Common - tail fiber assembly domain protein PSPTO_3397 2 None None None 28872077 Common parE DNA topoisomerase IV subunit B PSPTO_4963 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 28870958 Common fadH 2,4-dienoyl-CoA reductase PSPTO_3803 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28867509 Pathogen - hypothetical protein PSPTO_0277 1 None None None 28870104 Common aspB aspartate aminotransferase PSPTO_2925 235 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28872382 Common hutU urocanate hydratase PSPTO_5270 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 28870151 Common modA molybdate ABC transporter, periplasmic molybdate-binding protein PSPTO_2973 141 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 28871011 Common - hypothetical protein PSPTO_3858 3 None None None 28868471 Common - cyanate MFS transporter PSPTO_1260 77 COG2807 CynX, Cyanate permease Inorganic ion transport and metabolism 28867289 Common - hypothetical protein PSPTO_0048 4 None None None 28867975 Common - transporter, putative PSPTO_0747 55 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 28872029 Common - high affinity branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_4915 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28869463 Pathogen - hypothetical protein PSPTO_2263 1 None None None 28872421 Common - glutamine synthetase PSPTO_5309 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 28869332 Common - sensory box histidine kinase/response regulator PSPTO_2129 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28872412 Common - penicillin amidase family protein PSPTO_5300 79 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 28868961 Common - glycosyl transferase, group 4 family protein PSPTO_1755 204 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 28872446 Common hisF imidazole glycerol phosphate synthase subunit HisF PSPTO_5334 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 28867308 Common exbD-1 biopolymer transport protein ExbD PSPTO_0068 136 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28867602 Common - ISPsy7, transposase PSPTO_0372 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871497 Common iciA chromosome replication initiation inhibitor protein PSPTO_4361 101 COG0583 LysR, Transcriptional regulator Transcription 28871908 Common - ISPsy6, transposase PSPTO_4792 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869254 Pathogen - lipoprotein, putative PSPTO_2050 1 None None None 28868149 Common gsT glutathione S-transferase PSPTO_0929 88 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28871957 Common speA arginine decarboxylase PSPTO_4842 71 COG1166 SpeA, Arginine decarboxylase (spermidine biosynthesis) Amino acid transport and metabolism 28868837 Common - hypothetical protein PSPTO_1631 64 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 28868041 Common - hypothetical protein PSPTO_0813 6 COG4966 PilW, Tfp pilus assembly protein PilW Cell motility and secretion / Intracellular trafficking and secretion 28871367 Common nadB L-aspartate oxidase PSPTO_4225 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 28868614 Common hopB1 type III effector HopB1 PSPTO_1406 4 None None None 28870041 Common - hypothetical protein PSPTO_2859 14 None None None 28870862 Common - hypothetical protein PSPTO_3707 1 None None None 28870866 Common dnaQ DNA polymerase III subunit epsilon PSPTO_3711 186 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 28870085 Common vanR transcriptional regulator VanR PSPTO_2906 118 COG1802 GntR, Transcriptional regulators Transcription 28870594 Common - 6-pyruvoyl tetrahydrobiopterin synthase, putative PSPTO_3430 130 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 28868541 Pathogen - hypothetical protein PSPTO_1333 2 None None None 28870648 Common - dnaK suppressor protein, putative PSPTO_3487 134 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 28869825 Common galM aldose 1-epimerase PSPTO_2636 98 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 28867439 Common - hypothetical protein PSPTO_0206 15 COG5642 COG5642, Uncharacterized conserved protein Function unknown 28870891 Common - hypothetical protein PSPTO_3736 26 COG5477 COG5477, Predicted small integral membrane protein Function unknown 28868356 Common - hypothetical protein PSPTO_1141 29 None None None 28868040 Common - hypothetical protein PSPTO_0812 1 COG4967 PilV, Tfp pilus assembly protein PilV Cell motility and secretion / Intracellular trafficking and secretion 28871781 Pathogen - hypothetical protein PSPTO_4649 1 None None None 28870783 Common - sulfate ABC transporter, periplasmic sulfate-binding protein PSPTO_3625 90 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 28870852 Pathogen - hypothetical protein PSPTO_3697 1 None None None 28872705 Common atpI F0F1 ATP synthase subunit I PSPTO_5606 20 COG3312 AtpI, F0F1-type ATP synthase, subunit I Energy production and conversion 28867560 Common envZ osmolarity sensor protein EnvZ PSPTO_0329 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871653 Common - non-ribosomal peptide synthetase, terminal component PSPTO_4519 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28867333 Pathogen - hypothetical protein PSPTO_0093 1 None None None 28867543 Common - hypothetical protein PSPTO_0312 25 COG4539 COG4539, Predicted membrane protein Function unknown 28871774 Common fnr-2 ferredoxin--NADP reductase PSPTO_4642 111 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 28870003 Common - fatty acid desaturase PSPTO_2818 27 COG3239 DesA, Fatty acid desaturase Lipid metabolism 28868221 Common - hypothetical protein PSPTO_1001 21 None None None 28868324 Common prfA peptide chain release factor 1 PSPTO_1109 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 28871825 Common - ISPsy13, transposase OrfB PSPTO_4696 145 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869219 Common - CAAX amino terminal protease family protein PSPTO_2015 20 None None None 28872104 Common - hypothetical protein PSPTO_4990 5 COG5653 COG5653, Protein involved in cellulose biosynthesis (CelD) Cell envelope biogenesis, outer membrane 28871089 Common - hypothetical protein PSPTO_3942 5 None None None 28867859 Common rplV 50S ribosomal protein L22 PSPTO_0631 224 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 28871222 Common - sensor histidine kinase/response regulator PSPTO_4079 225 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871214 Common - hypothetical protein PSPTO_4071 26 COG3506 COG3506, Uncharacterized conserved protein Function unknown 28869585 Common - transposase/IS protein PSPTO_2388 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28868585 Pathogen avrE1 type III effector protein AvrE1 PSPTO_1377 3 None None None 28870774 Common - hypothetical protein PSPTO_3616 24 COG4249 COG4249, Uncharacterized protein containing caspase domain General function prediction only 28868587 Common hrpR type III transcriptional regulator HrpR PSPTO_1379 169 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 28867972 Common - acetyl-CoA acetyltransferase PSPTO_0744 172 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 28868696 Common - xenobiotic reductase, putative PSPTO_1489 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28868075 Pathogen - hypothetical protein PSPTO_0854 1 None None None 28868669 Common - mutT/nudix family protein PSPTO_1462 44 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 28868957 Common ihfB integration host factor subunit beta PSPTO_1751 203 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 28870270 Common - hypothetical protein PSPTO_3096 7 COG3617 COG3617, Prophage antirepressor Transcription 28868743 Common frr ribosome recycling factor PSPTO_1537 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 28869595 Common rbsB-2 ribose ABC transporter, periplasmic ribose-binding protein PSPTO_2399 97 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28871460 Common - hypothetical protein PSPTO_4323 5 None None None 28871204 Common - transcriptional regulator, LysR family PSPTO_4061 160 COG0583 LysR, Transcriptional regulator Transcription 28869588 Common - hypothetical protein PSPTO_2391 1 None None None 28871939 Common rodA rod-shape-determining protein RodA PSPTO_4824 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 28872351 Common - ChaC-related protein PSPTO_5239 44 COG3703 ChaC, Uncharacterized protein involved in cation transport Inorganic ion transport and metabolism 28871033 Common - polyamine ABC transporter, permease protein, putative PSPTO_3881 70 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 28868253 Pathogen - hypothetical protein PSPTO_1036 1 None None None 28871704 Common - pyridoxal-dependent decarboxylase, pyridoxal binding domain PSPTO_4572 214 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 28871266 Common - hypothetical protein PSPTO_4124 1 None None None 28867448 Pathogen - hypothetical protein PSPTO_0216 1 None None None 28871952 Common - response regulator PSPTO_4837 216 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28870092 Common - glutamine ABC transporter, ATP-binding protein PSPTO_2913 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28872252 Common - hypothetical protein PSPTO_5139 25 COG3087 FtsN, Cell division protein Cell division and chromosome partitioning 28867854 Common rplC 50S ribosomal protein L3 PSPTO_0626 241 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 28872481 Pathogen - hypothetical protein PSPTO_5373 1 None None None 28871138 Common kup potassium uptake protein PSPTO_3993 88 COG3158 Kup, K+ transporter Inorganic ion transport and metabolism 28870149 Common - ISPsy5, transposase PSPTO_2971 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871554 Common - lipoprotein, putative PSPTO_4419 44 COG3107 LppC, Putative lipoprotein General function prediction only 28870724 Common gntV gluconokinase PSPTO_3564 80 COG3265 GntK, Gluconate kinase Carbohydrate transport and metabolism 28868017 Common - phosphonate ABC transporter, permease protein, putative PSPTO_0789 88 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 28867921 Common ribH riboflavin synthase subunit beta PSPTO_0693 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 28868439 Common - ISPsy5, transposase PSPTO_1227 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869391 Common - ompA family protein PSPTO_2189 170 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28867757 Pathogen - hypothetical protein PSPTO_0528 2 None None None 28867502 Common - biopolymer transport protein ExbB, putative PSPTO_0270 146 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28869125 Common - glutamine synthetase PSPTO_1921 224 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 28868068 Pathogen - hypothetical protein PSPTO_0847 1 None None None 28870075 Common - sensory box histidine kinase/response regulator PSPTO_2896 217 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28869963 Common - amino acid ABC transporter, permease protein PSPTO_2777 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28869575 Common thrS threonyl-tRNA synthetase PSPTO_2378 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28868377 Common - ompA family protein PSPTO_1164 161 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28871585 Common - hypothetical protein PSPTO_4450 19 COG3117 COG3117, Uncharacterized protein conserved in bacteria Function unknown 28868591 Pathogen hrpB type III secretion protein HrpB PSPTO_1383 2 None None None 28867614 Common - transcriptional regulator, ArsR family PSPTO_0384 106 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28871779 Common cioB cyanide-insensitive terminal oxidase CioB PSPTO_4647 147 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 28870528 Common aceA isocitrate lyase PSPTO_3364 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 28868468 Common - amino acid ABC transporter, permease protein PSPTO_1257 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28872179 Common - ISPsy8, transposase OrfB PSPTO_5066 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871459 Common - hypothetical protein PSPTO_4322 10 None None None 28871838 Common - alanyl tRNA synthetase-related protein PSPTO_4713 123 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 28868617 Pathogen - exchangeable effector locus protein PSPTO_1410 1 None None None 28871629 Common glmM phosphoglucosamine mutase PSPTO_4495 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 28871912 Pathogen - hypothetical protein PSPTO_4797 1 None None None 28869897 Common - hypothetical protein PSPTO_2710 60 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28867694 Common - glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein PSPTO_0464 61 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 28871831 Pathogen corP response regulator CorP PSPTO_4706 1 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28869474 Common - hypothetical protein PSPTO_2274 25 COG2388 COG2388, Predicted acetyltransferase General function prediction only 28871867 Common - UvrD/REP helicase family protein PSPTO_4751 230 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 28872343 Common - oxidoreductase, zinc-binding PSPTO_5231 189 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28867892 Common ugpB glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein PSPTO_0664 76 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28868819 Common - transcriptional regulator, LuxR family PSPTO_1613 84 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28870183 Common xylH D-xylose ABC transporter, permease protein PSPTO_3005 113 COG4214 XylH, ABC-type xylose transport system, permease component Carbohydrate transport and metabolism 28867726 Common bioH bioH protein PSPTO_0496 53 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28868127 Pathogen - hypothetical protein PSPTO_0907 1 None None None 28868528 Common - hypothetical protein PSPTO_1320 2 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 28868573 Common gstA glutathione S-transferase PSPTO_1365 88 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28871797 Common - exonuclease, putative PSPTO_4665 187 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 28870371 Common - oxidoreductase, 2-nitropropane dioxygenase family PSPTO_3202 116 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 28870275 Common - TPR domain protein PSPTO_3102 80 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 28872363 Common hemB delta-aminolevulinic acid dehydratase PSPTO_5251 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 28869689 Common - major facilitator family transporter PSPTO_2496 126 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872150 Common - tonB domain protein PSPTO_5036 35 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28867738 Common pqqE pyrroloquinoline quinone biosynthesis protein PqqE PSPTO_0509 166 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 28870680 Common - hypothetical protein PSPTO_3519 2 None None None 28871801 Common - endonuclease/exonuclease/phosphatase family protein PSPTO_4669 12 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 28870718 Common glcG glcG protein PSPTO_3558 76 COG3193 GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol General function prediction only 28869606 Common - bifunctional urease subunit gamma/beta PSPTO_2411 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 28869330 Common - universal stress protein family PSPTO_2127 19 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 28871583 Common - sugar isomerase, KpsF/GutQ PSPTO_4448 181 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 28872099 Common - toluene tolerance protein, putative PSPTO_4985 3 None None None 28871857 Common - ISPsy5, Orf1 PSPTO_4738 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867384 Common prlC oligopeptidase A PSPTO_0144 123 COG0339 Dcp, Zn-dependent oligopeptidases Amino acid transport and metabolism 28869672 Common - hypothetical protein PSPTO_2479 55 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 28867949 Common - transcriptional regulator, putative PSPTO_0721 20 COG2932 COG2932, Predicted transcriptional regulator Transcription 28870211 Common pgm phosphoglucomutase PSPTO_3035 192 COG0033 Pgm, Phosphoglucomutase Carbohydrate transport and metabolism 28867847 Common rpoB DNA-directed RNA polymerase subunit beta PSPTO_0619 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 28871032 Common - polyamine ABC transporter, permease protein, putative PSPTO_3880 186 COG4132 COG4132, ABC-type uncharacterized transport system, permease component General function prediction only 28869377 Common leuD isopropylmalate isomerase small subunit PSPTO_2174 207 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 28871144 Common - ISPsy5, transposase PSPTO_3999 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871196 Pathogen - hypothetical protein PSPTO_4053 1 None None None 28870508 Common cysG siroheme synthase PSPTO_3344 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 28869135 Common - hypothetical protein PSPTO_1931 49 COG3558 COG3558, Uncharacterized protein conserved in bacteria Function unknown 28872193 Common madL malonate transporter, MadL subunit PSPTO_5080 11 None None None 28867479 Common dehII haloacid dehalogenase, type II PSPTO_0247 33 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 28868901 Common mazG nucleoside triphosphate pyrophosphohydrolase PSPTO_1695 158 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 28870126 Common - putative 3-hydroxyphenylpropionic transporter MhpT PSPTO_2947 151 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870361 Common - amidase family protein PSPTO_3192 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28870690 Common - capsular polysaccharide biosynthesis protein PslA PSPTO_3529 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 28867550 Common - type IV pilus biogenesis protein PSPTO_0319 170 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 28872624 Common - sodium/hydrogen exchanger family protein PSPTO_5519 208 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 28872202 Common - hypothetical protein PSPTO_5089 12 COG4104 COG4104, Uncharacterized conserved protein Function unknown 28868637 Common ndk nucleoside diphosphate kinase PSPTO_1430 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 28869836 Common - hypothetical protein PSPTO_2647 3 None None None 28869278 Pathogen - hypothetical protein PSPTO_2074 1 None None None 28867968 Common smtA smtA protein PSPTO_0740 65 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 28869305 Common mfd transcription-repair coupling factor PSPTO_2101 231 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 28868095 Common - hypothetical protein PSPTO_0875 24 COG0439 AccC, Biotin carboxylase Lipid metabolism 28869408 Common brnQ branched-chain amino acid transport system II carrier protein PSPTO_2206 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 28869624 Common - capK domain protein PSPTO_2429 100 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 28870995 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase PSPTO_3842 203 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 28871934 Common lipB lipoyltransferase PSPTO_4819 169 COG0321 LipB, Lipoate-protein ligase B Coenzyme metabolism 28867340 Common lrp leucine-responsive regulatory protein PSPTO_0100 163 COG1522 Lrp, Transcriptional regulators Transcription 28867470 Common hslO Hsp33-like chaperonin PSPTO_0238 131 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 28870586 Common - hypothetical protein PSPTO_3422 1 None None None 28872465 Pathogen hopA1 type III effector HopA1 PSPTO_5354 2 None None None 28869644 Common soxG-2 sarcosine oxidase, gamma subunit PSPTO_2449 4 COG4583 COG4583, Sarcosine oxidase gamma subunit Amino acid transport and metabolism 28871375 Common - membrane protein TctB, putative PSPTO_4233 8 None None None 28871268 Common - hypothetical protein PSPTO_4126 9 None None None 28870142 Common - methionyl-tRNA synthetase PSPTO_2964 225 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28869698 Common - transcriptional regulator, AraC family PSPTO_2505 130 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28871435 Common - hypothetical protein PSPTO_4298 87 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 28868407 Common nfrB bacteriophage N4 adsorption protein B PSPTO_1194 22 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28871873 Pathogen - hypothetical protein PSPTO_4757 1 None None None 28870725 Common - gluconate permease PSPTO_3565 76 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 28870060 Common - lipoprotein, putative PSPTO_2878 4 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 28869235 Common - benzoate transport C-terminal domain protein PSPTO_2031 58 COG3135 BenE, Uncharacterized protein involved in benzoate metabolism Secondary metabolites biosynthesis, transport, and catabolism 28870037 Common - DNA-binding protein PSPTO_2855 7 None None None 28870077 Common glf UDP-galactopyranose mutase PSPTO_2898 58 COG0562 Glf, UDP-galactopyranose mutase Cell envelope biogenesis, outer membrane 28869522 Common - transposase/IS protein PSPTO_2322 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869616 Common amdA amidase PSPTO_2421 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28870516 Common infA translation initiation factor IF-1 PSPTO_3352 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 28867312 Common - endoribonuclease L-PSP, putative PSPTO_0072 186 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28868715 Common adk adenylate kinase PSPTO_1509 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 28868860 Common - hypothetical protein PSPTO_1654 24 COG4268 McrC, McrBC 5-methylcytosine restriction system component Defense mechanisms 28872312 Common - autotransporter, putative PSPTO_5200 63 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 28868136 Common - methyl-accepting chemotaxis protein, putative PSPTO_0916 6 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870911 Common - hypothetical protein PSPTO_3756 28 COG4104 COG4104, Uncharacterized conserved protein Function unknown 28867873 Common rplO 50S ribosomal protein L15 PSPTO_0645 212 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 28867836 Pathogen - hypothetical protein PSPTO_0608 1 None None None 28868924 Common - transporter, putative PSPTO_1718 84 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 28871591 Common - hypothetical protein PSPTO_4456 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 28871811 Pathogen cfa1 coronafacic acid synthetase, acyl carrier protein component PSPTO_4681 2 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28872566 Common - CAIB/BAIF family protein PSPTO_5460 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 28867282 Common - ISPsy5, Orf1 PSPTO_0040 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869313 Common lolD lipoprotein releasing system, ATP-binding protein LolD PSPTO_2110 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 162533080 Common rhlB ATP-dependent RNA helicase RhlB PSPTO_1253 233 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 28868492 Common - hypothetical protein PSPTO_1282 82 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 28867630 Common - chitinase PSPTO_0400 35 COG3469 COG3469, Chitinase Carbohydrate transport and metabolism 28870697 Common - glycosyl transferase, group 1 family protein PslI PSPTO_3536 100 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28871393 Common - ISPssy, transposase PSPTO_4253 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868118 Common - sensor histidine kinase/response regulator PSPTO_0898 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871403 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_4263 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28869733 Common - ISPssy, transposase PSPTO_2541 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868616 Common - hypothetical protein PSPTO_1409 23 None None None 28868446 Common algI alginate biosynthesis protein AlgI PSPTO_1235 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 28871566 Common - hypothetical protein PSPTO_4431 8 COG3105 COG3105, Uncharacterized protein conserved in bacteria Function unknown 28871988 Common - hypothetical protein PSPTO_4873 3 None None None 28869401 Common kgd alpha-ketoglutarate decarboxylase PSPTO_2199 147 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 28868987 Common - glutathione peroxidase family protein PSPTO_1781 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 28869806 Common - methyl-accepting chemotaxis protein PSPTO_2616 147 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28872183 Common - ATP-dependent RNA helicase rhlE, putative PSPTO_5070 238 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 28871198 Pathogen - hypothetical protein PSPTO_4055 1 None None None 28868899 Common rumA 23S rRNA 5-methyluridine methyltransferase PSPTO_1693 200 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 28869548 Common mobA molybdopterin-guanine dinucleotide biosynthesis protein A PSPTO_2351 107 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 28872027 Common - hypothetical protein PSPTO_4913 35 COG2942 COG2942, N-acyl-D-glucosamine 2-epimerase Carbohydrate transport and metabolism 28868756 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha PSPTO_1550 185 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 28869682 Common - hypothetical protein PSPTO_2489 18 None None None 28870451 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein PSPTO_3287 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 28871620 Common - ISPsy6, transposase PSPTO_4485 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868360 Common - hypothetical protein PSPTO_1145 67 COG2119 COG2119, Predicted membrane protein Function unknown 28872199 Common mdcB triphosphoribosyl-dephospho-CoA synthase PSPTO_5086 46 COG1767 CitG, Triphosphoribosyl-dephospho-CoA synthetase Coenzyme metabolism 28870336 Common - lipoprotein, putative PSPTO_3165 17 COG5608 COG5608, Conserved secreted protein Function unknown 28869461 Common - racemase, putative PSPTO_2261 43 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 28871818 Pathogen - hypothetical protein PSPTO_4688 2 None None None 28872414 Common potH putrescine ABC transporter, permease protein PSPTO_5302 202 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 28867995 Common - ABC transporter, permease protein PSPTO_0767 108 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 28872055 Common hflX GTP-binding protein HflX PSPTO_4941 220 COG2262 HflX, GTPases General function prediction only 28870243 Common - major facilitator family transporter PSPTO_3068 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28868338 Common - hypothetical protein PSPTO_1123 61 COG3272 COG3272, Uncharacterized conserved protein Function unknown 28870133 Common ftrA transcriptional activator FtrA PSPTO_2955 154 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28868873 Common - universal stress protein family PSPTO_1667 42 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 28872440 Common - peptidase, M23/M37 family PSPTO_5328 188 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 28871595 Common - hypothetical protein PSPTO_4460 3 None None None 28872711 Common - putative inner membrane protein translocase component YidC PSPTO_5612 214 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 28871046 Common - CAIB/BAIF family protein PSPTO_3894 116 COG1804 CaiB, Predicted acyl-CoA transferases/carnitine dehydratase Energy production and conversion 28867623 Common - hypothetical protein PSPTO_0393 1 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 28868793 Common srmB ATP-dependent RNA helicase SrmB PSPTO_1587 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 28872268 Common tatB sec-independent translocase PSPTO_5156 30 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 28871370 Common - hypothetical protein PSPTO_4228 85 COG0354 COG0354, Predicted aminomethyltransferase related to GcvT General function prediction only 28871894 Common - endoribonuclease L-PSP family protein PSPTO_4778 152 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 162533072 Common - potassium/proton antiporter PSPTO_5023 134 COG3263 COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain Inorganic ion transport and metabolism 28872289 Common - hypothetical protein PSPTO_5177 29 COG5343 COG5343, Uncharacterized protein conserved in bacteria Function unknown 28871022 Common - hypothetical protein PSPTO_3869 5 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 28871347 Common - transcriptional regulator, GntR family PSPTO_4205 89 COG1802 GntR, Transcriptional regulators Transcription 28868488 Common gcvH glycine cleavage system protein H PSPTO_1277 180 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 28869173 Common fliM flagellar motor switch protein FliM PSPTO_1969 112 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 28868835 Common csrA-1 carbon storage regulator PSPTO_1629 78 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 28868643 Common - hypothetical protein PSPTO_1436 44 COG2976 COG2976, Uncharacterized protein conserved in bacteria Function unknown 28872548 Pathogen - hypothetical protein PSPTO_5442 1 None None None 28872409 Common - hypothetical protein PSPTO_5297 1 None None None 28869097 Common - sensor histidine kinase PSPTO_1893 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870809 Common - acetyltransferase, GNAT family PSPTO_3654 9 COG0456 RimI, Acetyltransferases General function prediction only 28870669 Common psrA transcriptional regulator PsrA PSPTO_3508 65 COG1309 AcrR, Transcriptional regulator Transcription 28870791 Common ccmB heme exporter protein CcmB PSPTO_3634 77 COG2386 CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 28872648 Common - ISPsy5, transposase PSPTO_5543 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868081 Common - hypothetical protein PSPTO_0860 21 None None None 28870392 Common - hypothetical protein PSPTO_3226 7 None None None 28870974 Common - hypothetical protein PSPTO_3820 45 COG3816 COG3816, Uncharacterized protein conserved in bacteria Function unknown 28869482 Common pabB para-aminobenzoate synthase component I PSPTO_2282 223 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 28869597 Common - transketolase, N-terminal subunit PSPTO_2401 221 COG3959 COG3959, Transketolase, N-terminal subunit Carbohydrate transport and metabolism 28867244 Common dnaA chromosomal replication initiation protein PSPTO_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 28870417 Common - dipeptide ABC transporter, ATP-binding protein PSPTO_3252 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869731 Common - Rhs element Vgr protein PSPTO_2538 58 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28870687 Common - DNA-binding response regulator, LuxR family PSPTO_3526 213 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28872249 Common rpmE 50S ribosomal protein L31 PSPTO_5136 192 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 28868810 Common - hydrolase, putative PSPTO_1604 103 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28867559 Common ompR osmolarity response regulator PSPTO_0328 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28867718 Common - ABC transporter, permease protein PSPTO_0488 212 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 28869263 Common - hypothetical protein PSPTO_2059 89 COG2308 COG2308, Uncharacterized conserved protein Function unknown 28871738 Common - hypothetical protein PSPTO_4606 9 None None None 28867655 Common - hypothetical protein PSPTO_0425 170 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 28870668 Common nagZ beta-hexosaminidase PSPTO_3507 178 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 28868343 Common hemH ferrochelatase PSPTO_1128 163 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 28868885 Common - transcriptional regulatory protein PhoP, putative PSPTO_1679 205 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28869878 Common - lipoprotein, putative PSPTO_2690 1 None None None 28868489 Common - sensory box protein/response regulator PSPTO_1278 225 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28869959 Common - hypothetical protein PSPTO_2773 16 None None None 28871242 Common - MaoC-like domain protein PSPTO_4100 97 COG2030 MaoC, Acyl dehydratase Lipid metabolism 28870848 Pathogen - hypothetical protein PSPTO_3693 1 None None None 28872525 Common - serine/threonine phosphoprotein phosphatase PSPTO_5417 134 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 28869953 Common - lipopolysaccharide core biosynthesis domain protein PSPTO_2767 7 None None None 28870737 Common - methyl-accepting chemotaxis protein PSPTO_3577 134 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28868675 Common purT phosphoribosylglycinamide formyltransferase 2 PSPTO_1468 193 COG0027 PurT, Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) Nucleotide transport and metabolism 28870026 Common - ISPsy14, transposition helper protein PSPTO_2842 94 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28868181 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase PSPTO_0961 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 28870080 Common - DNA-binding protein PSPTO_2901 100 COG1396 HipB, Predicted transcriptional regulators Transcription 28872539 Common - hypothetical protein PSPTO_5431 15 COG3518 COG3518, Uncharacterized protein conserved in bacteria Function unknown 28872582 Common phoB phosphate regulon transcriptional regulatory protein PhoB PSPTO_5477 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870345 Common - hypothetical protein PSPTO_3174 7 COG4575 ElaB, Uncharacterized conserved protein Function unknown 28867342 Common - endoribonuclease L-PSP family protein PSPTO_0102 143 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28872298 Common - monooxygenase, DszA family PSPTO_5186 73 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28870948 Common ppnK inorganic polyphosphate/ATP-NAD kinase PSPTO_3793 223 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 28872123 Common - membrane protein, TIGR01666 PSPTO_5009 58 COG1289 COG1289, Predicted membrane protein Function unknown 28868402 Common - ISPsy5, transposase PSPTO_1189 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871276 Common - hypothetical protein PSPTO_4134 59 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 28868843 Common - ABC transporter, permease protein, putative PSPTO_1637 41 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 28869638 Pathogen - hypothetical protein PSPTO_2443 1 None None None 28872583 Common phoR phosphate regulon sensor protein phoR PSPTO_5478 219 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 28872324 Common - ISPsy5, transposase PSPTO_5212 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869240 Pathogen - lipoprotein, putative PSPTO_2036 1 COG4907 COG4907, Predicted membrane protein Function unknown 28871849 Common hopG1 type III effector HopG1 PSPTO_4727 5 None None None 28868999 Common - hypothetical protein PSPTO_1793 24 COG5553 COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily General function prediction only 28870257 Common - glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein PSPTO_3082 166 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28868682 Common trmD tRNA (guanine-N(1)-)-methyltransferase PSPTO_1475 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 28870231 Common - transcriptional regulator, AraC family PSPTO_3056 100 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28868606 Pathogen hrpP type III secretion protein HrpP PSPTO_1398 1 None None None 28869211 Common - hypothetical protein PSPTO_2007 7 None None None 28867667 Common folA dihydrofolate reductase PSPTO_0437 144 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 28871014 Common - transcriptional regulator, MarR family PSPTO_3861 46 COG1846 MarR, Transcriptional regulators Transcription 28872239 Common aroB 3-dehydroquinate synthase PSPTO_5126 209 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 28871634 Common greA transcription elongation factor GreA PSPTO_4500 204 COG0782 GreA, Transcription elongation factor Transcription 28869905 Common - hypothetical protein PSPTO_2718 90 COG0467 RAD55, RecA-superfamily ATPases implicated in signal transduction Signal transduction mechanisms 28872281 Common - lipoprotein, putative PSPTO_5169 7 None None None 28872129 Common - lyase, putative PSPTO_5015 6 None None None 28872606 Common ansA L-asparaginase I PSPTO_5501 121 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 28870446 Common - lipoprotein, putative PSPTO_3282 59 COG2267 PldB, Lysophospholipase Lipid metabolism 28871644 Common - ISPsy11, transposase OrfA PSPTO_4510 9 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868624 Common - hypothetical protein PSPTO_1417 17 COG3134 COG3134, Predicted outer membrane lipoprotein Function unknown 28870844 Common - hypothetical protein PSPTO_3689 59 COG3046 COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase General function prediction only 28871029 Common - transcriptional regulator, GntR family PSPTO_3877 110 COG2188 PhnF, Transcriptional regulators Transcription 28869075 Common - cytosine/purine/uracil/thiamine/allantoin permease family protein PSPTO_1871 53 COG1953 FUI1, Cytosine/uracil/thiamine/allantoin permeases Nucleotide transport and metabolism / Coenzyme metabolism 28867645 Common - hypothetical protein PSPTO_0415 8 None None None 28870536 Common nuoI NADH dehydrogenase subunit I PSPTO_3372 191 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 28869799 Common - hypothetical protein PSPTO_2609 75 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 28871240 Common fadD-2 acyl-CoA synthetase PSPTO_4098 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28868315 Common - site-specific recombinase, phage integrase family PSPTO_1100 105 COG0582 XerC, Integrase DNA replication, recombination, and repair 28872673 Common - hypothetical protein PSPTO_5568 2 None None None 28867461 Common rnk nucleoside diphosphate kinase regulator PSPTO_0229 67 COG0782 GreA, Transcription elongation factor Transcription 28872688 Common - glycosyl transferase, group 2 family protein PSPTO_5587 180 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28868980 Pathogen - hypothetical protein PSPTO_1774 1 None None None 28871076 Common sfcA malate dehydrogenase PSPTO_3924 196 COG0281 SfcA, Malic enzyme Energy production and conversion 28869650 Common - hypothetical protein PSPTO_2455 3 None None None 28871325 Common rpmE2 50S ribosomal protein L31 type B PSPTO_4183 96 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 28869040 Common astD succinylglutamic semialdehyde dehydrogenase PSPTO_1835 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28867421 Common - molybdopterin oxidoreductase, alpha subunit PSPTO_0181 168 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 28871052 Common - sensory box histidine kinase/response regulator PSPTO_3900 217 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 28867265 Common - hypothetical protein PSPTO_0023 2 None None None 28871521 Common - Rhs element Vgr protein PSPTO_4385 54 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28868859 Common - hypothetical protein PSPTO_1653 41 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 28871755 Common - hypothetical protein PSPTO_4623 2 None None None 28868156 Common - hypothetical protein PSPTO_0936 17 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 28869642 Common - transcriptional regulator, LysR family PSPTO_2447 124 COG0583 LysR, Transcriptional regulator Transcription 28867683 Common - hypothetical protein PSPTO_0453 2 None None None 28871616 Common - hypothetical protein PSPTO_4481 111 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 28871991 Common cobH precorrin-8X methylmutase PSPTO_4876 118 COG2082 CobH, Precorrin isomerase Coenzyme metabolism 28872684 Common - Ais protein, putative PSPTO_5583 4 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 28867842 Common nusG transcription antitermination protein NusG PSPTO_0614 215 COG0250 NusG, Transcription antiterminator Transcription 28869920 Common cti esterified fatty acid cis/trans isomerase PSPTO_2733 15 None None None 28867246 Common recF recombination protein F PSPTO_0003 166 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 28869458 Common - DoxD-like family protein PSPTO_2257 25 COG2259 COG2259, Predicted membrane protein Function unknown 28871162 Common - hypothetical protein PSPTO_4019 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 28867258 Pathogen - hypothetical protein PSPTO_0016 1 None None None 28868531 Common - chemotaxis protein CheV, putative PSPTO_1323 150 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28870386 Common - ISPsy5, transposase PSPTO_3220 65 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870402 Common - methyl-accepting chemotaxis protein PSPTO_3237 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871220 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_4077 149 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 28867932 Common - O-antigen ABC transporter, permease protein, putative PSPTO_0704 124 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 28870664 Common - cardiolipin synthase 2 PSPTO_3503 146 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 28871542 Common murC UDP-N-acetylmuramate--L-alanine ligase PSPTO_4407 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 28868421 Common - regulatory protein, putative PSPTO_1208 43 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 28870303 Common glgX glycogen operon protein GlgX PSPTO_3130 150 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 28872143 Common - hypothetical protein PSPTO_5029 9 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28871517 Common - hypothetical protein PSPTO_4381 13 None None None 28871358 Common era GTP-binding protein Era PSPTO_4216 239 COG1159 Era, GTPase General function prediction only 28869182 Common fleN flagellar synthesis regulator FleN PSPTO_1978 156 COG0455 COG0455, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28868106 Common malK maltose/maltodextrin ABC transporter, ATP-binding protein PSPTO_0886 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 162533089 Common - Tat (twin-arginine translocation) pathway signal sequence domain protein PSPTO_5624 2 None None None 28870352 Common - transcriptional regulator, LysR family PSPTO_3182 167 COG0583 LysR, Transcriptional regulator Transcription 28870627 Common ssuD alkanesulfonate monooxygenase PSPTO_3466 84 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28869496 Common crfX crfX protein PSPTO_2296 1 None None None 28868875 Common tdcD propionate kinase PSPTO_1669 161 COG0282 ackA, Acetate kinase Energy production and conversion 28867963 Common - LrgA family protein PSPTO_0735 2 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 28871120 Common tolQ-2 tolQ protein PSPTO_3975 144 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28867666 Common - hypothetical protein PSPTO_0436 6 None None None 28871919 Common miaB tRNA-i(6)A37 modification enzyme MiaB PSPTO_4804 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 28869749 Common phnF transcriptional regulator PhnF PSPTO_2558 114 COG2188 PhnF, Transcriptional regulators Transcription 28872575 Common - hypothetical protein PSPTO_5470 7 None None None 28867576 Common - hypothetical protein PSPTO_0345 13 None None None 28871767 Common - hypothetical protein PSPTO_4635 81 COG2949 SanA, Uncharacterized membrane protein Function unknown 28871770 Common cstA carbon starvation protein CstA PSPTO_4638 106 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 28870461 Common - DNA-binding heavy metal response regulator, putative PSPTO_3297 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28871365 Common mucA sigma factor algU negative regulatory protein MucA PSPTO_4223 3 COG3073 RseA, Negative regulator of sigma E activity Signal transduction mechanisms 28868733 Common csdA cysteine sulfinate desulfinase PSPTO_1527 237 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 28868305 Common - hypothetical protein PSPTO_1090 4 None None None 28870542 Common - hypothetical protein PSPTO_3378 184 COG0628 PerM, Predicted permease General function prediction only 28868363 Common alkK acyl-CoA synthetase PSPTO_1148 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28870570 Common - hypothetical protein PSPTO_3406 2 None None None 28871249 Common - hypothetical protein PSPTO_4107 11 COG5626 COG5626, Uncharacterized small conserved protein Function unknown 28871297 Common argG argininosuccinate synthase PSPTO_4155 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 28868845 Common mnmC 5-methylaminomethyl-2-thiouridine methyltransferase PSPTO_1639 79 COG4121 COG4121, Uncharacterized conserved protein Function unknown 28871180 Common - lysozyme, putative PSPTO_4037 37 COG3179 COG3179, Predicted chitinase General function prediction only 28871290 Common - iron-sulfur cluster-binding protein PSPTO_4148 98 COG2878 COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB Energy production and conversion 28869939 Common tpx thiol peroxidase PSPTO_2752 106 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 28867360 Common - hypothetical protein PSPTO_0120 11 COG4982 COG4982, 3-oxoacyl- acyl-carrier protein 28867943 Common - hypothetical protein PSPTO_0715 11 None None None 28869513 Common - sensory box/GGDEF domain protein PSPTO_2313 181 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28870620 Common - hypothetical protein PSPTO_3459 245 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 28867508 Common - hydrolase, haloacid dehalogenase-like family PSPTO_0276 177 COG0546 Gph, Predicted phosphatases General function prediction only 28871318 Common - sigma-54 dependent transcriptional regulator/response regulator PSPTO_4176 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868030 Common rpsT 30S ribosomal protein S20 PSPTO_0802 135 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 28869931 Common - transcriptional regulator, LysR family PSPTO_2744 139 COG0583 LysR, Transcriptional regulator Transcription 28871292 Pathogen - hypothetical protein PSPTO_4150 1 None None None 162533074 Common fliG flagellar motor switch protein G PSPTO_1959 125 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 28872513 Common - transcriptional regulator, LysR family PSPTO_5405 165 COG0583 LysR, Transcriptional regulator Transcription 28869609 Common - branched-chain amino acid ABC transporter, ATP-binding protein, putative PSPTO_2414 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28870812 Common zipA cell division protein ZipA PSPTO_3657 46 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 28871135 Common dinP DNA polymerase IV PSPTO_3990 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 28872692 Common - ISPsy5, transposase PSPTO_5591 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868608 Common hrcN type III secretion cytoplasmic ATPase HrcN PSPTO_1400 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 28870882 Common tig trigger factor PSPTO_3727 217 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 28872313 Common - hypothetical protein PSPTO_5201 1 None None None 28872456 Common - site-specific recombinase, phage integrase family PSPTO_5344 119 COG0582 XerC, Integrase DNA replication, recombination, and repair 28869929 Common mvaB hydroxymethylglutaryl-CoA lyase PSPTO_2742 172 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 28872034 Common - transcriptional regulator, LysR family PSPTO_4920 152 COG0583 LysR, Transcriptional regulator Transcription 28871760 Pathogen - hypothetical protein PSPTO_4628 1 None None None 28872153 Common pyrR pyrimidine regulatory protein PyrR PSPTO_5039 109 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 28867511 Common - hypothetical protein PSPTO_0279 4 COG2898 COG2898, Uncharacterized conserved protein Function unknown 28872244 Common pilN type IV pilus biogenesis protein PilN PSPTO_5131 45 COG3166 PilN, Tfp pilus assembly protein PilN Cell motility and secretion / Intracellular trafficking and secretion 28871943 Common nadD nicotinic acid mononucleotide adenyltransferase PSPTO_4828 158 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 28869887 Common - GAF domain/GGDEF domain/EAL domain protein PSPTO_2699 177 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28872664 Common - hypothetical protein PSPTO_5559 169 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 28869927 Common - ISPsy4, transposase PSPTO_2740 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867369 Common hemD uroporphyrinogen-III synthase PSPTO_0129 59 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 28868869 Common - acetyltransferase, GNAT family PSPTO_1663 63 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 28869072 Common hss homospermidine synthase PSPTO_1868 25 COG5310 COG5310, Homospermidine synthase Secondary metabolites biosynthesis, transport, and catabolism 28871716 Common - hypothetical protein PSPTO_4584 1 None None None 28870456 Pathogen hopAH2-1 type III effector HopAH2-1 PSPTO_3292 2 None None None 28867585 Common - hypothetical protein PSPTO_0355 16 None None None 28867765 Common rpoD RNA polymerase sigma factor RpoD PSPTO_0537 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 28868436 Common - short chain dehydrogenase PSPTO_1223 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 28871238 Common - hypothetical protein PSPTO_4096 3 None None None 28868186 Common - hypothetical protein PSPTO_0966 4 None None None 28871684 Common - transcriptional regulator, GntR family PSPTO_4550 150 COG2186 FadR, Transcriptional regulators Transcription 28867322 Common argB acetylglutamate kinase PSPTO_0082 219 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 28870933 Common - BNR/Asp-box repeat protein PSPTO_3778 42 COG4447 COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor General function prediction only 28872178 Common - ISPsy8, transposase OrfA PSPTO_5065 20 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868513 Common - hypothetical protein PSPTO_1303 42 COG3530 COG3530, Uncharacterized protein conserved in bacteria Function unknown 28872551 Common - ISPsy5, transposase PSPTO_5445 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868567 Common - ABC transporter, permease protein PSPTO_1359 70 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 28869693 Common - major facilitator family transporter PSPTO_2500 136 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872131 Common putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase PSPTO_5017 220 COG4230 COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase Energy production and conversion 28868630 Common iscS cysteine desulfurase PSPTO_1423 238 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 28870087 Common - hypothetical protein PSPTO_2908 2 None None None 28869666 Common - periplasmic substrate-binding protein PSPTO_2473 107 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28868538 Common - glycosyl transferase, group 2 family protein PSPTO_1330 207 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28870579 Pathogen - hypothetical protein PSPTO_3415 1 None None None 28869252 Common - transcriptional regulator, LuxR family PSPTO_2048 78 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28870320 Common - hypothetical protein PSPTO_3147 21 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 28872090 Common thiC thiamine biosynthesis protein ThiC PSPTO_4976 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 28868244 Common wssB cellulose synthase, catalytic subunit PSPTO_1027 127 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28867408 Common - sulfate transporter family protein PSPTO_0168 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 28869226 Common - hypothetical protein PSPTO_2022 52 COG3123 COG3123, Uncharacterized protein conserved in bacteria Function unknown 28871650 Common - hypothetical protein PSPTO_4516 1 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 28872374 Common metN-2 D-methionine ABC transporter, ATP-binding protein PSPTO_5262 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 28867353 Common rep ATP-dependent DNA helicase Rep PSPTO_0113 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 28868851 Common - transcriptional regulator, MarR family PSPTO_1645 95 COG1846 MarR, Transcriptional regulators Transcription 28870483 Common - transcriptional regulator, TetR family PSPTO_3319 55 COG1309 AcrR, Transcriptional regulator Transcription 28868952 Common serC phosphoserine aminotransferase PSPTO_1746 110 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 28871772 Common radA DNA repair protein RadA PSPTO_4640 210 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 28871352 Common lon-2 ATP-dependent protease La PSPTO_4210 208 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 28871073 Common - hypothetical protein PSPTO_3921 34 COG3100 COG3100, Uncharacterized protein conserved in bacteria Function unknown 28868834 Common - hypothetical protein PSPTO_1628 36 COG1742 COG1742, Uncharacterized conserved protein Function unknown 28870497 Common - alkaline metalloendoprotease PSPTO_3333 129 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 28871999 Common - hypothetical protein PSPTO_4884 1 None None None 28868644 Common - PQQ enzyme repeat domain protein PSPTO_1437 110 COG1520 COG1520, FOG: WD40-like repeat Function unknown 28871090 Common - carbon storage regulator, putative PSPTO_3943 69 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 28867801 Common - hypothetical protein PSPTO_0573 2 COG5185 HEC1, Protein involved in chromosome segregation, interacts with SMC proteins Cell division and chromosome partitioning 28867371 Common - hemY protein, putative PSPTO_0131 51 COG3071 HemY, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 28872393 Pathogen - hypothetical protein PSPTO_5281 1 None None None 28870804 Common plcA1 acid phosphatase PSPTO_3648 36 COG3511 PlcC, Phospholipase C Cell envelope biogenesis, outer membrane 28867660 Common rpoH RNA polymerase factor sigma-32 PSPTO_0430 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 28867777 Common apaH diadenosine tetraphosphatase PSPTO_0549 91 COG0639 ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases Signal transduction mechanisms 28868326 Common moeB molybdopterin biosynthesis protein MoeB PSPTO_1111 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 28872444 Common - trypsin domain protein PSPTO_5332 3 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 28872032 Common braD high-affinity branched-chain amino acid ABC transporter, permease protein BraD PSPTO_4918 171 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 28869126 Common - major facilitator family transporter PSPTO_1922 67 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 28871845 Common shcV type III chaperone ShcV PSPTO_4721 2 None None None 28869412 Common fabB 3-oxoacyl-(acyl carrier protein) synthase I PSPTO_2210 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28872383 Common - histidine transporter, periplasmic histidine-binding protein PSPTO_5271 45 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 28870633 Common - putative monovalent cation/H+ antiporter subunit C PSPTO_3472 92 COG1006 MnhC, Multisubunit Na+/H+ antiporter, MnhC subunit Inorganic ion transport and metabolism 28869817 Common - amino acid ABC transporter, permease protein PSPTO_2628 170 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28871714 Common - hypothetical protein PSPTO_4582 1 None None None 28868883 Common - dienelactone hydrolase family protein PSPTO_1677 110 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 28871900 Common - GGDEF domain protein PSPTO_4784 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28867568 Common - prevent-host-death family protein PSPTO_0337 44 COG2161 StbD, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 28869300 Pathogen - hypothetical protein PSPTO_2096 1 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 28868330 Common - hypothetical protein PSPTO_1115 18 None None None 28871974 Common aroQ 3-dehydroquinate dehydratase PSPTO_4859 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 28870445 Common - carbohydrate diacid regulator, putative PSPTO_3281 41 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 28868876 Common xfp putative phosphoketolase PSPTO_1670 65 COG3957 COG3957, Phosphoketolase Carbohydrate transport and metabolism 28870391 Common - transposase/IS protein PSPTO_3225 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869730 Common - hypothetical protein PSPTO_2537 6 None None None 28869422 Common - hypothetical protein PSPTO_2220 6 None None None 28871313 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_4171 114 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28868309 Pathogen - hypothetical protein PSPTO_1094 1 None None None 28870363 Common - ISPssy, transposase PSPTO_3194 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867335 Common - phospholipase D family protein PSPTO_0095 116 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 28867744 Common - ISPsy8, transposase OrfA PSPTO_0515 20 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869499 Common oprF outer membrane porin OprF PSPTO_2299 166 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28870488 Pathogen - hypothetical protein PSPTO_3324 1 None None None 28872319 Common - hypothetical protein PSPTO_5207 17 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 28868434 Common - transporter, LysE family PSPTO_1221 75 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28869880 Common - hypothetical protein PSPTO_2692 1 None None None 28868286 Common - glycosyl transferase, group 2 family protein PSPTO_1071 147 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28868129 Common - chemotaxis protein CheD, putative PSPTO_0909 79 COG1871 CheD, Chemotaxis protein; stimulates methylation of MCP proteins Cell motility and secretion / Signal transduction mechanisms 28871127 Common - hypothetical protein PSPTO_3982 17 COG4321 COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis General function prediction only 28871990 Common cobI precorrin-2 C(20)-methyltransferase PSPTO_4875 152 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 28871696 Common - dipeptide ABC transporter, permease protein PSPTO_4562 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28867636 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_0406 185 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28871245 Common - hypothetical protein PSPTO_4103 1 None None None 28867848 Common rpoC DNA-directed RNA polymerase subunit beta' PSPTO_0620 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 28871298 Common - sodium-type flagellar protein MotY, putative PSPTO_4156 60 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28868364 Common - hypothetical protein PSPTO_1149 18 None None None 28870452 Common - hypothetical protein PSPTO_3288 1 None None None 28870130 Common - glycosidase, putative PSPTO_2952 8 None None None 28869459 Common - sigma-54 dependent transcriptional regulator PSPTO_2259 168 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 28870384 Common - hypothetical protein PSPTO_3218 3 None None None 28869183 Common fliA flagellar biosynthesis sigma factor PSPTO_1979 213 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 28871181 Pathogen - tail fiber domain protein PSPTO_4038 3 None None None 28871016 Common psyR transcriptional regulator PsyR PSPTO_3863 91 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28868779 Common - hypothetical protein PSPTO_1573 11 None None None 28867964 Common - hypothetical protein PSPTO_0736 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 28871546 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase PSPTO_4411 217 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 28872156 Pathogen - hypothetical protein PSPTO_5042 1 None None None 28872233 Common - amidase family protein PSPTO_5120 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28868789 Common - hypothetical protein PSPTO_1583 79 COG2378 COG2378, Predicted transcriptional regulator Transcription 28872180 Common - 4-hydroxybenzoyl-CoA thioesterase domain protein PSPTO_5067 73 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 28869547 Common - lipoprotein, putative PSPTO_2350 2 None None None 28869955 Common - lipoprotein, putative PSPTO_2769 12 None None None 28872314 Common - hypothetical protein PSPTO_5202 1 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 28868856 Common - autotransporter, putative PSPTO_1650 115 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 28869383 Common - MFS transporter, phthalate permease family PSPTO_2180 207 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28872308 Common - ABC transporter, permease protein PSPTO_5196 144 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 28871963 Common - response regulator PSPTO_4848 69 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868600 Common hrcU type III secretion protein HrcU PSPTO_1392 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 28868510 Common zwf-1 glucose-6-phosphate 1-dehydrogenase PSPTO_1300 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 28869230 Common - ethanolamine permease family protein PSPTO_2026 172 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 28871948 Common - sensory box histidine kinase PSPTO_4833 196 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28870094 Common - glutamine ABC transporter, permease protein PSPTO_2915 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28867324 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase PSPTO_0084 181 COG0756 Dut, dUTPase Nucleotide transport and metabolism 28869889 Common - fructokinase PSPTO_2701 155 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 28872145 Common pilJ type IV pilus biogenesis protein PilJ PSPTO_5031 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28867572 Common dsbA thiol:disulfide interchange protein DsbA PSPTO_0341 67 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28870302 Common - hypothetical protein PSPTO_3129 2 COG5373 COG5373, Predicted membrane protein Function unknown 28867264 Common - DNA-binding protein PSPTO_0022 2 None None None 28870944 Common - hypothetical protein PSPTO_3789 20 None None None 28871273 Common - hypothetical protein PSPTO_4131 1 None None None 28868744 Common uppS undecaprenyl diphosphate synthase PSPTO_1538 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 162533073 Common - FMN reductase, NADPH-dependent PSPTO_3708 107 COG0431 COG0431, Predicted flavoprotein General function prediction only 28870722 Pathogen - hypothetical protein PSPTO_3562 1 None None None 28870258 Common - glutamine/glutamate ABC transporter, ATP-binding protein PSPTO_3083 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28872696 Common glmU UDP-N-acetylglucosamine pyrophosphorylase PSPTO_5597 232 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 28872172 Common - hypothetical protein PSPTO_5059 1 None None None 28867795 Common gph phosphoglycolate phosphatase PSPTO_0567 181 COG0546 Gph, Predicted phosphatases General function prediction only 28871587 Common - ABC transporter, ATP-binding protein PSPTO_4452 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 28871646 Common - hypothetical protein PSPTO_4512 62 COG2914 COG2914, Uncharacterized protein conserved in bacteria Function unknown 28870179 Common xylR xylose operon regluatory protein PSPTO_3001 94 COG1609 PurR, Transcriptional regulators Transcription 28868796 Common - hypothetical protein PSPTO_1590 18 None None None 28868960 Common - UDP-glucose 4-epimerase, putative PSPTO_1754 164 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28870957 Common - 1-aminocyclopropane-1-carboxylate deaminase, putative PSPTO_3802 33 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 28872618 Common - hypothetical protein PSPTO_5513 1 None None None 28869923 Common - biotin carboxylase/biotin-containing subunit PSPTO_2736 238 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 28871660 Common - 6-aminohexanoate-cyclic-dimer hydrolase, putative PSPTO_4526 220 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28867952 Common - DedA family protein PSPTO_0724 109 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 28869084 Common - 3-hydroxyisobutyrate dehydrogenase PSPTO_1880 171 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 28872687 Common - capsular polysaccharide biosynthesis protein PSPTO_5586 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28871021 Common - hypothetical protein PSPTO_3868 5 None None None 28869080 Pathogen - hypothetical protein PSPTO_1876 1 None None None 28869144 Common flgG flagellar basal body rod protein FlgG PSPTO_1940 126 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 28869223 Common pdxB erythronate-4-phosphate dehydrogenase PSPTO_2019 229 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 28869965 Common - endoribonuclease L-PSP family protein PSPTO_2779 179 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28871223 Common - DNA-binding response regulator, LuxR family PSPTO_4080 224 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28868487 Common gcvP glycine dehydrogenase PSPTO_1276 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 28868103 Pathogen hopR1 type III effector HopR1 PSPTO_0883 3 None None None 28869732 Common hcp-1 secreted protein Hcp PSPTO_2539 32 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 28868408 Common - hypothetical protein PSPTO_1195 8 None None None 28870819 Common - transcriptional regulator, GntR family PSPTO_3664 128 COG1802 GntR, Transcriptional regulators Transcription 28869873 Common aroE shikimate 5-dehydrogenase PSPTO_2685 196 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 28867365 Common argH argininosuccinate lyase PSPTO_0125 233 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 28867686 Common purU-1 formyltetrahydrofolate deformylase PSPTO_0456 219 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 28867780 Common pdxA 4-hydroxythreonine-4-phosphate dehydrogenase PSPTO_0552 159 COG1995 PdxA, Pyridoxal phosphate biosynthesis protein Coenzyme metabolism 28868861 Pathogen - hypothetical protein PSPTO_1655 1 None None None 28869309 Common - thiamine biosynthesis lipoprotein, putative PSPTO_2105 129 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 28872517 Common - ATP-dependent DNA helicase domain protein PSPTO_5409 236 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 28872463 Common - methyl-accepting chemotaxis protein PSPTO_5352 160 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870084 Common vanB vanillate O-demethylase oxidoreductase PSPTO_2905 105 COG1018 Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Energy production and conversion 28870409 Common - transcriptional regulator, AraC family PSPTO_3244 54 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28867514 Common - hypothetical protein PSPTO_0282 7 None None None 28867671 Common badH betaine aldehyde dehydrogenase PSPTO_0441 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28869983 Common - hypothetical protein PSPTO_2797 4 None None None 28870885 Pathogen - hypothetical protein PSPTO_3730 1 COG1287 COG1287, Uncharacterized membrane protein, required for N-linked glycosylation General function prediction only 28872327 Common - ISPsy5, transposase PSPTO_5215 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868818 Common - major facilitator family transporter PSPTO_1612 150 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870975 Common - lipoprotein, putative PSPTO_3821 1 None None None 28871114 Common - radical SAM domain protein PSPTO_3969 169 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 28870758 Common - dyp-type peroxidase family protein PSPTO_3598 34 COG2837 COG2837, Predicted iron-dependent peroxidase Inorganic ion transport and metabolism 28871516 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSPTO_4380 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28872262 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase PSPTO_5150 222 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28868395 Common folE GTP cyclohydrolase I PSPTO_1182 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 28867669 Common - hypothetical protein PSPTO_0439 17 COG0486 ThdF, Predicted GTPase General function prediction only 28868418 Common - ribosomal subunit interface protein, putative PSPTO_1205 18 None None None 28871085 Common - hypothetical protein PSPTO_3935 3 None None None 28869256 Common - hypothetical protein PSPTO_2052 1 None None None 28869311 Common - glycerophosphoryl diester phosphodiesterase, putative PSPTO_2107 152 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 28867656 Common - peptidase, M16 family PSPTO_0426 199 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 28867617 Common pgk phosphoglycerate kinase PSPTO_0387 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 28867313 Common spoT guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase PSPTO_0073 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 28868117 Common - DNA-binding response regulator, LuxR family PSPTO_0897 179 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28870832 Common - hypothetical protein PSPTO_3677 28 COG3668 ParE, Plasmid stabilization system protein General function prediction only 28870139 Common - L-lysine 6-monooxygenase, putative PSPTO_2961 52 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 28867657 Common ftsY signal recognition particle-docking protein FtsY PSPTO_0427 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 28871311 Common glpR glycerol-3-phosphate regulon repressor PSPTO_4169 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 28869151 Common - glycosyl transferase, group 2 family protein PSPTO_1947 82 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 28868782 Common - hypothetical protein PSPTO_1576 40 COG0583 LysR, Transcriptional regulator Transcription 28869238 Common - hypothetical protein PSPTO_2034 21 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 28870965 Common metZ O-succinylhomoserine sulfhydrylase PSPTO_3810 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 28871764 Common glyA serine hydroxymethyltransferase PSPTO_4632 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 28869958 Common - hypothetical protein PSPTO_2772 7 None None None 28872116 Common waaC lipopolysaccharide heptosyltransferase PSPTO_5002 102 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 28869781 Common - GGDEF domain protein PSPTO_2591 177 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28872320 Common - hypothetical protein PSPTO_5208 8 None None None 28872163 Common metX homoserine O-acetyltransferase PSPTO_5049 133 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 28872523 Common - Rhs element Vgr protein PSPTO_5415 59 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28867875 Common rpmJ 50S ribosomal protein L36 PSPTO_0647 139 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 28868898 Common cysM cysteine synthase B PSPTO_1692 226 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 28869775 Common - glutamate synthase family protein PSPTO_2585 210 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 28871649 Common smpB SsrA-binding protein PSPTO_4515 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 28868563 Common - ABC transporter, ATP-binding protein PSPTO_1355 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 28870233 Common proX glycine betaine transporter periplasmic subunit PSPTO_3058 46 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 28872532 Common - sigma-54 dependent transcriptional regulator PSPTO_5424 173 COG3604 FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains Transcription / Signal transduction mechanisms 28868112 Common - autotransporter, putative PSPTO_0892 68 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 28870427 Common nirD nitrite reductase [NAD(P)H], small subunit PSPTO_3263 44 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 28868337 Common - transcriptional regulator, MerR family PSPTO_1122 40 COG0789 SoxR, Predicted transcriptional regulators Transcription 28868848 Common - hypothetical protein PSPTO_1642 20 COG2832 COG2832, Uncharacterized protein conserved in bacteria Function unknown 28870463 Common phaG-1 3-hydroxyacyl-CoA-acyl carrier protein transferase PSPTO_3299 8 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28868629 Common - rrf2 family protein PSPTO_1422 173 COG1959 COG1959, Predicted transcriptional regulator Transcription 28869027 Common phhA phenylalanine 4-monooxygenase PSPTO_1822 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 28868266 Common dctM TRAP dicarboxylate transporter, DctM subunit PSPTO_1049 135 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 28869690 Pathogen - hypothetical protein PSPTO_2497 1 None None None 28867600 Common - MATE efflux family protein PSPTO_0370 110 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 28871508 Common - hypothetical protein PSPTO_4372 5 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28868655 Common - hypothetical protein PSPTO_1448 2 None None None 28871618 Common - hypothetical protein PSPTO_4483 6 None None None 28870459 Common pncA pyrazinamidase/nicotinamidase PSPTO_3295 114 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28868403 Common - ISPsy5, Orf1 PSPTO_1190 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872616 Common - acetyl-CoA carboxylase PSPTO_5511 237 COG0439 AccC, Biotin carboxylase Lipid metabolism 28867345 Common - DNA-binding protein PSPTO_0105 96 COG1396 HipB, Predicted transcriptional regulators Transcription 28870242 Common - hypothetical protein PSPTO_3067 1 None None None 28872084 Common - YD repeat protein PSPTO_4970 36 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28870830 Common - 1-aminocyclopropane-1-carboxylate deaminase PSPTO_3675 90 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 28872641 Common - CDP-alcohol phosphatidyltransferase family protein PSPTO_5536 45 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 28872593 Common - major facilitator family transporter PSPTO_5488 128 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28867734 Common - GGDEF domain protein PSPTO_0505 174 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28872015 Common - phosphate starvation-inducible protein PsiF PSPTO_4900 22 None None None 28869374 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_2171 186 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28869759 Common gcd-1 glucose dehydrogenase PSPTO_2568 59 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 28870518 Common clpS ATP-dependent Clp protease adaptor protein ClpS PSPTO_3354 116 COG2127 COG2127, Uncharacterized conserved protein Function unknown 28867306 Common - oxidative stress regulatory protein OxyR, putative PSPTO_0066 190 COG0583 LysR, Transcriptional regulator Transcription 28870991 Common maf Maf-like protein PSPTO_3837 194 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 28867825 Common - OsmC/Ohr family protein PSPTO_0597 86 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 28868175 Common fruK 1-phosphofructokinase PSPTO_0955 91 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 28870216 Common - transcriptional regulator, LysR family PSPTO_3040 112 COG0583 LysR, Transcriptional regulator Transcription 28870694 Common - glycosyl transferase, group 1 family protein PslF PSPTO_3533 36 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28870220 Common - ISPsy12, transposase OrfA PSPTO_3045 15 None None None 28870748 Common - phenazine biosynthesis family protein PSPTO_3588 107 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 28871193 Common - hypothetical protein PSPTO_4050 5 None None None 28871802 Pathogen - hypothetical protein PSPTO_4670 2 None None None 28871299 Common - dihydroorotase PSPTO_4157 86 COG0418 PyrC, Dihydroorotase Nucleotide transport and metabolism 28871916 Pathogen - hypothetical protein PSPTO_4801 1 None None None 28868227 Common - methyl-accepting chemotaxis protein PSPTO_1008 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871387 Pathogen - hypothetical protein PSPTO_4245 1 None None None 28870505 Common - hypothetical protein PSPTO_3341 56 COG2920 DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit Inorganic ion transport and metabolism 28868332 Common - hypothetical protein PSPTO_1117 62 COG3496 COG3496, Uncharacterized conserved protein Function unknown 28869898 Common - response regulator PSPTO_2711 183 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28870806 Common - hypothetical protein PSPTO_3650 10 COG4637 COG4637, Predicted ATPase General function prediction only 28871163 Common - acetyltransferase, GNAT family PSPTO_4020 50 COG0456 RimI, Acetyltransferases General function prediction only 28869581 Common ihfA integration host factor subunit alpha PSPTO_2384 208 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 90818605 Pathogen - PSPTO5621 PSPTO_5621 1 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 28868180 Common panC pantoate--beta-alanine ligase PSPTO_0960 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 28872488 Common - allophanate hydrolase, putative PSPTO_5380 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 28868735 Common - arsC family protein PSPTO_1529 111 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 28870910 Common - hypothetical protein PSPTO_3755 67 COG1971 COG1971, Predicted membrane protein Function unknown 28871651 Common - fatty acid desaturase, putative PSPTO_4517 5 COG3239 DesA, Fatty acid desaturase Lipid metabolism 28870269 Common - lipoprotein, putative PSPTO_3094 17 None None None 28871599 Common - hypothetical protein PSPTO_4464 61 COG3028 COG3028, Uncharacterized protein conserved in bacteria Function unknown 28869101 Common - BNR/Asp-box repeat protein PSPTO_1897 25 COG4692 COG4692, Predicted neuraminidase (sialidase) Carbohydrate transport and metabolism 28872311 Pathogen - hypothetical protein PSPTO_5199 1 None None None 28870566 Common - hypothetical protein PSPTO_3402 1 None None None 28870161 Common - histidine kinase phosphoacceptor domain protein PSPTO_2983 47 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 28870915 Common - hypothetical protein PSPTO_3760 81 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 28872549 Common - ISPsy5, transposase PSPTO_5443 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869903 Common - response regulator PSPTO_2716 173 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868080 Common - hypothetical protein PSPTO_0859 31 COG3451 VirB4, Type IV secretory pathway, VirB4 components Intracellular trafficking and secretion 28871637 Common dapB dihydrodipicolinate reductase PSPTO_4503 217 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 28868527 Common - hypothetical protein PSPTO_1319 1 None None None 28872371 Common - Sco1/SenC family protein PSPTO_5259 107 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 28871285 Pathogen - hypothetical protein PSPTO_4143 1 None None None 28870581 Common - hypothetical protein PSPTO_3417 1 None None None 28870934 Common - hypothetical protein PSPTO_3779 18 None None None 28867629 Common etfB-1 electron transfer flavoprotein, beta subunit PSPTO_0399 14 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 28870887 Pathogen - hypothetical protein PSPTO_3732 1 None None None 28872584 Common - transporter, putative PSPTO_5479 216 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 28868235 Common - hypothetical protein PSPTO_1016 2 None None None 28871357 Common recO DNA repair protein RecO PSPTO_4215 62 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 28868422 Common - RNA polymerase sigma factor PSPTO_1209 66 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28869170 Common fliK flagellar hook-length control protein FliK PSPTO_1966 32 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 28872505 Common rfbC-2 dTDP-4-dehydrorhamnose 3,5-epimerase PSPTO_5397 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 28870224 Common - sugar ABC transporter, periplasmic sugar-binding, putative PSPTO_3049 117 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28869993 Common - GGDEF domain protein PSPTO_2807 176 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28867999 Common - transcriptional regulator, TetR family PSPTO_0771 94 COG1309 AcrR, Transcriptional regulator Transcription 28871556 Common gmhA phosphoheptose isomerase PSPTO_4421 122 COG0279 GmhA, Phosphoheptose isomerase Carbohydrate transport and metabolism 28869213 Common - hypothetical protein PSPTO_2009 1 None None None 28869623 Common - multidrug resistance protein NorM, putative PSPTO_2428 164 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 28869649 Common purU-2 formyltetrahydrofolate deformylase PSPTO_2454 217 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 28872288 Common - RNA polymerase sigma factor PSPTO_5176 132 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28871625 Common nusA transcription elongation factor NusA PSPTO_4491 216 COG0195 NusA, Transcription elongation factor Transcription 28868933 Pathogen - hypothetical protein PSPTO_1727 1 None None None 28872211 Common - hypothetical protein PSPTO_5098 41 COG4261 COG4261, Predicted acyltransferase General function prediction only 28871024 Common htrB lipid A biosynthesis lauroyl acyltransferase PSPTO_3871 106 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 28867902 Common - tonB domain protein PSPTO_0674 26 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28869721 Common - hypothetical protein PSPTO_2528 11 COG3619 COG3619, Predicted membrane protein Function unknown 28872020 Common - bacterioferritin, putative PSPTO_4906 112 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 28868681 Common rimM 16S rRNA-processing protein PSPTO_1474 182 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 28871077 Common - gas vesicle protein, putative PSPTO_3925 4 None None None 28871563 Common - ATPase, putative PSPTO_4428 104 COG1485 COG1485, Predicted ATPase General function prediction only 28872052 Common hisZ ATP phosphoribosyltransferase regulatory subunit PSPTO_4938 160 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 28868134 Common - STAS domain protein PSPTO_0914 10 COG3113 COG3113, Predicted NTP binding protein (contains STAS domain) General function prediction only 28868006 Common recD exodeoxyribonuclease V, alpha subunit PSPTO_0778 119 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 28870293 Common - Cof-like hydrolase family protein PSPTO_3120 134 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 28871623 Common rbfA ribosome-binding factor A PSPTO_4489 178 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 28869452 Common - transglutaminase-like domain protein PSPTO_2250 100 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 28872139 Pathogen - hypothetical protein PSPTO_5025 1 None None None 28870641 Common - methyl-accepting chemotaxis protein PSPTO_3480 144 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871128 Common - Dps family protein PSPTO_3983 145 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 28869679 Common - ABC transporter, periplasmic substrate-binding protein, putative PSPTO_2486 29 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28872476 Common - hypothetical protein PSPTO_5365 10 None None None 28872341 Common - hypothetical protein PSPTO_5229 94 COG2947 COG2947, Uncharacterized conserved protein Function unknown 28870412 Common - mandelate racemase/muconate lactonizing enzyme family protein PSPTO_3247 108 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 28870795 Common recR recombination protein RecR PSPTO_3638 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 28868579 Common - conserved effector locus protein PSPTO_1371 55 COG3781 COG3781, Predicted membrane protein Function unknown 28868466 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_1255 110 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869833 Common - MltA-interacting protein PSPTO_2644 27 COG3713 OmpV, Outer membrane protein V Cell envelope biogenesis, outer membrane 28870729 Common - hypothetical protein PSPTO_3569 1 None None None 28867947 Common - hypothetical protein PSPTO_0719 3 None None None 28872198 Common mdcC malonate decarboxylase subunit delta PSPTO_5085 26 None None None 28869294 Pathogen - hypothetical protein PSPTO_2090 1 None None None 28868902 Common - hypothetical protein PSPTO_1696 30 COG3122 COG3122, Uncharacterized protein conserved in bacteria Function unknown 28868220 Common - CDP-alcohol phosphatidyltransferase family protein PSPTO_1000 23 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 28871062 Common - hypothetical protein PSPTO_3910 2 None None None 28871334 Common - hypothetical protein PSPTO_4192 55 COG1695 COG1695, Predicted transcriptional regulators Transcription 28871350 Common - HAMP domain/GGDEF domain/EAL domain protein PSPTO_4208 174 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 28868087 Common - hypothetical protein PSPTO_0866 15 None None None 28867546 Common - iron ABC transporter, permease protein PSPTO_0315 169 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 28869554 Pathogen - hypothetical protein PSPTO_2357 1 None None None 28870338 Pathogen - hypothetical protein PSPTO_3167 1 None None None 28868546 Common sodC superoxide dismutase, Cu-Zn PSPTO_1338 87 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 28867386 Common - hypothetical protein PSPTO_0146 16 COG4324 COG4324, Predicted aminopeptidase General function prediction only 28869503 Common - serine/threonine protein kinase, putative PSPTO_2303 142 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 28868765 Common - esterase, putative PSPTO_1559 101 COG0627 COG0627, Predicted esterase General function prediction only 28867534 Common - response regulator PSPTO_0303 187 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 28871731 Pathogen shcS1 type III chaperone ShcS1 PSPTO_4599 1 None None None 28872208 Common - hypothetical protein PSPTO_5095 28 COG4648 COG4648, Predicted membrane protein Function unknown 28867380 Common - homoserine/homoserine lactone efflux protein PSPTO_0140 104 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28869857 Common - hypothetical protein PSPTO_2669 48 COG5470 COG5470, Uncharacterized conserved protein Function unknown 28869976 Common - hypothetical protein PSPTO_2790 8 None None None 28872557 Common - hypothetical protein PSPTO_5451 18 COG5339 COG5339, Uncharacterized protein conserved in bacteria Function unknown 28868463 Common - lipoprotein, putative PSPTO_1252 21 COG4380 COG4380, Uncharacterized protein conserved in bacteria Function unknown 28868518 Common - AcrB/AcrD/AcrF family protein PSPTO_1308 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28868903 Common - hypothetical protein PSPTO_1697 1 None None None 28868062 Common - hypothetical protein PSPTO_0836 173 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 28872091 Common - outer membrane efflux protein TolC, putative PSPTO_4977 137 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28871502 Common - iron-regulated protein A, putative PSPTO_4366 34 COG3487 IrpA, Uncharacterized iron-regulated protein Inorganic ion transport and metabolism 28867472 Common - prevent-host-death family protein PSPTO_0240 16 None None None 28871898 Common gal D-galactose 1-dehydrogenase PSPTO_4782 114 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 28869062 Common - transcriptional regulator, AraC family PSPTO_1857 117 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28867820 Common trpG anthranilate synthase component II PSPTO_0592 235 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 28869046 Common - threonine aldolase, low-specificity PSPTO_1841 97 COG2008 GLY1, Threonine aldolase Amino acid transport and metabolism 28871188 Pathogen - hypothetical protein PSPTO_4045 1 None None None 28872132 Common - ISPsy9, transposase OrfB PSPTO_5018 147 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872191 Common - malonate utilization transcriptional regulator PSPTO_5078 175 COG0583 LysR, Transcriptional regulator Transcription 28868344 Common uraA uracil transporter PSPTO_1129 131 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 28868022 Common - tRNA 2-selenouridine synthase PSPTO_0794 65 COG2603 COG2603, Predicted ATPase General function prediction only 28867443 Common iucD L-lysine 6-monooxygenase PSPTO_0211 57 COG3486 IucD, Lysine/ornithine N-monooxygenase Secondary metabolites biosynthesis, transport, and catabolism 28870140 Common - hypothetical protein PSPTO_2962 27 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28872569 Common pntB NAD(P) transhydrogenase, beta subunit PSPTO_5464 123 COG1282 PntB, NAD/NADP transhydrogenase beta subunit Energy production and conversion 28869260 Common - hypothetical protein PSPTO_2056 62 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 28867729 Common - hypothetical protein PSPTO_0499 1 None None None 28869352 Common - pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component PSPTO_2149 223 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28871060 Common - hypothetical protein PSPTO_3908 6 None None None 28867434 Common - hypothetical protein PSPTO_0200 55 COG0439 AccC, Biotin carboxylase Lipid metabolism 28872627 Common - hypothetical protein PSPTO_5522 10 None None None 28869133 Common - ISPsy6, transposase PSPTO_1929 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871053 Common - hypothetical protein PSPTO_3901 37 COG3555 COG3555, Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases Posttranslational modification, protein turnover, chaperones 28871931 Common - hypothetical protein PSPTO_4816 1 COG3036 COG3036, Uncharacterized protein conserved in bacteria Function unknown 28867735 Common - acyl-CoA dehydrogenase family protein PSPTO_0506 146 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28871374 Common - TctC protein, putative PSPTO_4232 69 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 28872560 Common - transcriptional regulator, GntR family PSPTO_5454 123 COG1802 GntR, Transcriptional regulators Transcription 28868094 Common - nikkomycin biosynthesis domain protein PSPTO_0874 27 COG0439 AccC, Biotin carboxylase Lipid metabolism 28872042 Common - hypothetical protein PSPTO_4928 73 COG1032 COG1032, Fe-S oxidoreductase Energy production and conversion 28869267 Common - amidotransferase PSPTO_2063 142 COG0518 GuaA, GMP synthase - Glutamine amidotransferase domain Nucleotide transport and metabolism 28867928 Common xseB exodeoxyribonuclease VII small subunit PSPTO_0700 134 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 162533075 Common fliE flagellar hook-basal body protein FliE PSPTO_1957 86 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 28870998 Common lpxK tetraacyldisaccharide 4'-kinase PSPTO_3845 122 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 28871745 Common - C4-dicarboxylate transporter/malic acid transport protein PSPTO_4613 27 COG1275 TehA, Tellurite resistance protein and related permeases Inorganic ion transport and metabolism 28871328 Pathogen - hypothetical protein PSPTO_4186 1 None None None 28868339 Pathogen - hypothetical protein PSPTO_1124 1 None None None 28871253 Common livG leucine/isoleucine/valine transporter ATP-binding subunit PSPTO_4111 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28871657 Common - transcriptional regulator, AsnC family PSPTO_4523 149 COG1522 Lrp, Transcriptional regulators Transcription 28869608 Common ureE urease accessory protein UreE PSPTO_2413 19 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 28871452 Common - transcriptional regulator, putative PSPTO_4315 4 None None None 28869671 Common topB DNA topoisomerase III PSPTO_2478 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 28870714 Common hppD 4-hydroxyphenylpyruvate dioxygenase PSPTO_3553 78 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 28867891 Common ugpA glycerol-3-phosphate ABC transporter, permease protein PSPTO_0663 139 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 28867387 Common - hypothetical protein PSPTO_0147 2 None None None 28870715 Common maiA maleylacetoacetate isomerase PSPTO_3554 89 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 162533087 Pathogen - hypothetical protein PSPTO_5631 1 None None None 28867524 Pathogen - hypothetical protein PSPTO_0293 1 None None None 28869076 Pathogen - hypothetical protein PSPTO_1872 1 None None None 28872581 Common ubiA 4-hydroxybenzoate octaprenyltransferase PSPTO_5476 165 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 28871875 Common - hypothetical protein PSPTO_4759 30 COG0622 COG0622, Predicted phosphoesterase General function prediction only 28871477 Common - insecticidal toxin protein, putative PSPTO_4340 65 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28867789 Pathogen - hypothetical protein PSPTO_0561 1 None None None 28870330 Common - mutlidrug resistance protein, putative PSPTO_3159 32 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869782 Common - AcrB/AcrD/AcrF family protein PSPTO_2592 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28869362 Common - macrolide ABC efflux protein PSPTO_2159 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 28869967 Common - hypothetical protein PSPTO_2781 61 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 28867838 Common birA biotin--protein ligase PSPTO_0610 230 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 28869339 Common daT diaminobutyrate--2-oxoglutarate aminotransferase PSPTO_2136 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 28867294 Common - hypothetical protein PSPTO_0053 7 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 28869265 Common - transglutaminase-like domain protein PSPTO_2061 98 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 28869875 Common - hypothetical protein PSPTO_2687 34 COG3812 COG3812, Uncharacterized protein conserved in bacteria Function unknown 28870470 Common - phospholipase/carboxylesterase family protein PSPTO_3306 109 COG0400 COG0400, Predicted esterase General function prediction only 28867979 Common - hypothetical protein PSPTO_0751 1 None None None 28870775 Common - transcriptional regulator, MarR family PSPTO_3617 72 COG1846 MarR, Transcriptional regulators Transcription 28869576 Common infC translation initiation factor IF-3 PSPTO_2379 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 28869680 Common - hypothetical protein PSPTO_2487 90 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 28871235 Common - leucine rich repeat domain protein PSPTO_4093 14 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 28869664 Common - hypothetical protein PSPTO_2471 12 None None None 28868519 Common - HlyD family secretion protein PSPTO_1309 164 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28869594 Common rbsA-2 ribose ABC transporter, ATP-binding protein PSPTO_2398 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 28868350 Common - homocysteine S-methyltransferase family protein PSPTO_1135 82 COG2040 MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Amino acid transport and metabolism 28869586 Pathogen - hypothetical protein PSPTO_2389 2 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 28870593 Common - DNA-binding protein, putative PSPTO_3429 41 COG3311 AlpA, Predicted transcriptional regulator Transcription 28868273 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_1056 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868956 Common rpsA 30S ribosomal protein S1 PSPTO_1750 219 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 28868085 Common - transposase/IS protein PSPTO_0864 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28868249 Common wssG cell morphology protein PSPTO_1032 4 None None None 28869533 Common - exopolysaccharide production protein ExoZ, putative PSPTO_2335 46 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 28868580 Pathogen hopAA1-1 type III effector HopAA1-1 PSPTO_1372 2 None None None 28870793 Common - hypothetical protein PSPTO_3636 9 None None None 28869329 Common - tRNA-dihydrouridine synthase A PSPTO_2126 200 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 28868551 Common - hypothetical protein PSPTO_1343 55 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28872109 Common - ISPsy5, Orf1 PSPTO_4995 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869358 Common - aminotransferase, class V PSPTO_2155 188 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 28871216 Common fmdA formamidase PSPTO_4073 63 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 28869369 Common gltX glutamyl-tRNA synthetase PSPTO_2166 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 28872683 Common - ISPssy, transposase PSPTO_5582 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868807 Pathogen - hypothetical protein PSPTO_1601 1 None None None 28869014 Common - YciI-like protein PSPTO_1808 70 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 28867432 Common - ISPsy5, transposase PSPTO_0196 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869393 Common - hypothetical protein PSPTO_2191 1 None None None 28870322 Common cobN cobaltochelatase PSPTO_3149 89 COG1429 CobN, Cobalamin biosynthesis protein CobN and related Mg-chelatases Coenzyme metabolism 28871729 Pathogen hopS1 type III effector HopS1 PSPTO_4597 1 None None None 28872621 Common uvrD DNA-dependent helicase II PSPTO_5516 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 28867808 Common - tail tape meausure protein PSPTO_0580 29 COG5412 COG5412, Phage-related protein Function unknown 28869611 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_2416 140 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 28871463 Common - hypothetical protein PSPTO_4326 22 None None None 28871136 Common - hypothetical protein PSPTO_3991 67 COG2898 COG2898, Uncharacterized conserved protein Function unknown 28867673 Common betA choline dehydrogenase PSPTO_0443 94 COG2303 BetA, Choline dehydrogenase and related flavoproteins Amino acid transport and metabolism 28868012 Common - TonB-dependent siderophore receptor, putative PSPTO_0784 129 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 28868146 Common pilB type IV pilus biogenesis protein PilB PSPTO_0926 216 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 28868153 Common - hypothetical protein PSPTO_0933 17 COG0439 AccC, Biotin carboxylase Lipid metabolism 28869438 Common - hypothetical protein PSPTO_2236 2 None None None 28869981 Common dnaE2 error-prone DNA polymerase PSPTO_2795 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 28871896 Common - hypothetical protein PSPTO_4780 4 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 28872385 Common - histidine ABC transporter, ATP-binding protein, putative PSPTO_5273 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 28871603 Common cafA ribonuclease G PSPTO_4468 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 28868242 Common - transglycosylase, putative PSPTO_1025 93 COG2821 MltA, Membrane-bound lytic murein transglycosylase Cell envelope biogenesis, outer membrane 28871784 Common - iron-sulfur cluster-binding protein PSPTO_4652 122 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 28867779 Common ksgA dimethyladenosine transferase PSPTO_0551 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 28870096 Common - hypothetical protein PSPTO_2917 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 28871707 Common opuCA glycine betaine/choline transporter ATP-binding protein PSPTO_4575 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 28871955 Common - mutT/nudix family protein PSPTO_4840 26 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 28870733 Common - putative acetyltransferase PSPTO_3573 43 COG0456 RimI, Acetyltransferases General function prediction only 28872419 Common - putrescine ABC transporter, periplasmic putrescine-binding protein PSPTO_5307 132 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 28869918 Common - periplasmic sugar-binding domain protein PSPTO_2731 35 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28869514 Common dacB D-alanyl-D-alanine carboxypeptidase PSPTO_2314 103 COG2027 DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Cell envelope biogenesis, outer membrane 28870571 Common - hypothetical protein PSPTO_3407 20 None None None 28871822 Common - ISPsy5, transposase PSPTO_4693 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869303 Common - helicase/SNF2 family domain protein PSPTO_2099 140 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 28872074 Common parC DNA topoisomerase IV subunit A PSPTO_4960 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 28869765 Common - peptide ABC transporter, permease protein PSPTO_2574 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869074 Common - sensory box histidine kinase/response regulator PSPTO_1870 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871207 Common - transcriptional regulator, TetR family PSPTO_4064 35 COG1309 AcrR, Transcriptional regulator Transcription 28872679 Common - hypothetical protein PSPTO_5578 6 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28868455 Common - hypothetical protein PSPTO_1244 87 COG3022 COG3022, Uncharacterized protein conserved in bacteria Function unknown 28869863 Common - hypothetical protein PSPTO_2675 23 None None None 28870117 Common - hypothetical protein PSPTO_2938 24 COG0583 LysR, Transcriptional regulator Transcription 28871917 Common - hypothetical protein PSPTO_4802 57 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 28872101 Common - hypothetical protein PSPTO_4987 4 None None None 28871941 Common - hypothetical protein PSPTO_4826 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 28868589 Pathogen hrpA1 type III helper protein HrpA1 PSPTO_1381 1 None None None 28868701 Common - CheW domain protein PSPTO_1494 37 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28872225 Common - major facilitator superfamily protein PSPTO_5112 84 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28867505 Common - transcriptional regulator, AsnC family PSPTO_0273 149 COG1522 Lrp, Transcriptional regulators Transcription 28868831 Pathogen - hypothetical protein PSPTO_1625 1 None None None 28871465 Common - ISPs1, transposase OrfB PSPTO_4328 67 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870154 Common - DNA topoisomerase, type I, putative PSPTO_2976 45 COG3569 COG3569, Topoisomerase IB DNA replication, recombination, and repair 28872701 Common atpH F0F1 ATP synthase subunit delta PSPTO_5602 185 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 28869537 Common pcaG protocatechuate 3,4-dioxygenase, alpha subunit PSPTO_2339 38 COG3485 PcaH, Protocatechuate 3,4-dioxygenase beta subunit Secondary metabolites biosynthesis, transport, and catabolism 28870856 Common - cation transporter, putative PSPTO_3701 48 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 28870110 Common - hypothetical protein PSPTO_2931 15 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 28870869 Common - hydroxyacylglutathione hydrolase, putative PSPTO_3714 194 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 28867529 Common - resolvase, putative PSPTO_0298 102 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 28870865 Common - acetyltransferase, GNAT family PSPTO_3710 10 COG0456 RimI, Acetyltransferases General function prediction only 28869445 Common kdpB potassium-transporting ATPase, B subunit PSPTO_2243 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 28869427 Common - autotransporter, putative PSPTO_2225 45 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28870000 Common - hypothetical protein PSPTO_2815 17 COG4950 COG4950, Uncharacterized protein conserved in bacteria Function unknown 28867710 Common glcB-1 malate synthase G PSPTO_0480 65 COG2225 AceB, Malate synthase Energy production and conversion 28868560 Common - transcriptional regulator, GntR family PSPTO_1352 128 COG1802 GntR, Transcriptional regulators Transcription 28868069 Common - hypothetical protein PSPTO_0848 22 None None None 28870069 Pathogen - hypothetical protein PSPTO_2890 1 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 28868753 Common lpxB lipid-A-disaccharide synthase PSPTO_1547 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 28869911 Common - hypothetical protein PSPTO_2724 60 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 28868569 Common - amidase PSPTO_1361 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28871905 Common - hypothetical protein PSPTO_4789 4 None None None 28871700 Common - ISPsy5, transposase PSPTO_4567 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869034 Common - hypothetical protein PSPTO_1829 25 COG3608 COG3608, Predicted deacylase General function prediction only 28870214 Common - hypothetical protein PSPTO_3038 1 None None None 28868986 Common - methionine sulfoxide reductase B PSPTO_1780 194 COG0229 COG0229, Conserved domain frequently associated with peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 28869003 Common - sulfonate ABC transporter, ATP-binding protein, putative PSPTO_1797 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 28868917 Common cobD cobalamin biosynthesis protein PSPTO_1711 152 COG1270 CbiB, Cobalamin biosynthesis protein CobD/CbiB Coenzyme metabolism 28868963 Common - competence protein, putative PSPTO_1757 82 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 28872140 Pathogen - hypothetical protein PSPTO_5026 1 None None None 28869687 Common - transcriptional regulator, LysR family PSPTO_2494 157 COG0583 LysR, Transcriptional regulator Transcription 28867337 Common - hypothetical protein PSPTO_0097 1 COG5457 COG5457, Uncharacterized conserved small protein Function unknown 28867936 Common - HAD-superfamily hydrolase PSPTO_0708 184 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 28870066 Common - ISPssy, transposase PSPTO_2887 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28870959 Common - hydrolase, carbon-nitrogen family PSPTO_3804 29 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28869824 Common - cation ABC transporter, periplasmic cation-binding protein PSPTO_2635 176 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 28868313 Common - ISPsy5, transposase PSPTO_1098 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871142 Common - ISPsy5, Orf1 PSPTO_3997 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872390 Common - formimidoylglutamase, putative PSPTO_5278 58 COG3741 HutG, N-formylglutamate amidohydrolase Amino acid transport and metabolism 28870874 Common - ABC transporter, permease protein PSPTO_3719 221 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 28870921 Common sbcC exonuclease SbcC PSPTO_3766 96 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 28871719 Common - hypothetical protein PSPTO_4587 21 None None None 28869640 Common - hypothetical protein PSPTO_2445 7 None None None 28868036 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSPTO_0808 134 COG1047 SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 Posttranslational modification, protein turnover, chaperones 28868499 Common glk glucokinase PSPTO_1289 90 COG0837 Glk, Glucokinase Carbohydrate transport and metabolism 28872699 Common atpG F0F1 ATP synthase subunit gamma PSPTO_5600 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 28872433 Common tauC taurine ABC transporter, permease protein PSPTO_5321 194 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 28871344 Common - major facilitator family transporter PSPTO_4202 106 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 28869568 Common rbsK ribokinase PSPTO_2371 141 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 28869241 Common - Smr domain protein PSPTO_2037 93 COG2840 COG2840, Uncharacterized protein conserved in bacteria Function unknown 28868413 Common - hypothetical protein PSPTO_1200 19 COG3223 COG3223, Predicted membrane protein Function unknown 28871323 Common - mutT/nudix family protein PSPTO_4181 14 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 28869573 Common - cold shock domain family protein PSPTO_2376 180 COG1278 CspC, Cold shock proteins Transcription 28870846 Common - ea59 protein PSPTO_3691 15 COG3593 COG3593, Predicted ATP-dependent endonuclease of the OLD family DNA replication, recombination, and repair 28871910 Common - AMP nucleosidase PSPTO_4795 54 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 28867459 Common cyaY frataxin-like protein PSPTO_0227 44 COG1965 CyaY, Protein implicated in iron transport, frataxin homolog Inorganic ion transport and metabolism 28867500 Common - TonB system transport protein, putative PSPTO_0268 86 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28867395 Common - hypothetical protein PSPTO_0155 42 COG3360 COG3360, Uncharacterized conserved protein Function unknown 28868721 Common - hypothetical protein PSPTO_1515 52 None None None 28870611 Common - capsular polysaccharide biosynthesis protein PSPTO_3450 95 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 28869031 Common - arginine/ornithine ABC transporter, periplasmic arginine/ornithine-binding protein PSPTO_1826 172 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28867552 Common - transcriptional regulator, AsnC family PSPTO_0321 159 COG1522 Lrp, Transcriptional regulators Transcription 28867444 Common lysR DNA-binding transcriptional regulator LysR PSPTO_0212 175 COG0583 LysR, Transcriptional regulator Transcription 28870870 Common mltD membrane-bound lytic murein transglycosylase D PSPTO_3715 152 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 28869979 Common - hypothetical protein PSPTO_2793 30 COG4544 COG4544, Uncharacterized conserved protein Function unknown 28870736 Common tvrR TetR-like virulence regulator PSPTO_3576 78 COG1309 AcrR, Transcriptional regulator Transcription 28868328 Pathogen - hypothetical protein PSPTO_1113 1 None None None 28869960 Common - hypothetical protein PSPTO_2774 1 None None None 28869188 Common motC flagellar motor protein PSPTO_1984 123 COG1291 MotA, Flagellar motor component Cell motility and secretion 28867318 Common - hypothetical protein PSPTO_0078 30 COG3296 COG3296, Uncharacterized protein conserved in bacteria Function unknown 28872471 Common - amino acid ABC transporter, permease protein PSPTO_5360 173 COG4160 ArtM, ABC-type arginine/histidine transport system, permease component Amino acid transport and metabolism 28868728 Common - rRNA large subunit methyltransferase A, putative PSPTO_1522 58 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28871413 Common - transcriptional regulator, LysR family PSPTO_4276 168 COG0583 LysR, Transcriptional regulator Transcription 28869987 Common - prolidase, putative PSPTO_2801 99 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 28870997 Common - hypothetical protein PSPTO_3844 103 COG2835 COG2835, Uncharacterized conserved protein Function unknown 28869484 Common - hypothetical protein PSPTO_2284 19 None None None 28869868 Common gabD-3 succinate-semialdehyde dehydrogenase PSPTO_2680 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28870766 Pathogen - hypothetical protein PSPTO_3606 1 None None None 28871689 Common - hypothetical protein PSPTO_4555 29 COG3471 COG3471, Predicted periplasmic/secreted protein Function unknown 28870479 Common gspG general secretion pathway protein G PSPTO_3315 80 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 28867705 Common - hypothetical protein PSPTO_0475 1 None None None 28870827 Common - hypothetical protein PSPTO_3672 61 COG2354 COG2354, Uncharacterized protein conserved in bacteria Function unknown 28868992 Common - hypothetical protein PSPTO_1786 148 COG1741 COG1741, Pirin-related protein General function prediction only 28868507 Pathogen - hypothetical protein PSPTO_1297 1 None None None 28868821 Common - hypothetical protein PSPTO_1615 4 None None None 28872003 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_4888 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 28868944 Common - hypothetical protein PSPTO_1738 6 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 28870432 Common pstC phosphate ABC transporter, permease protein PSPTO_3268 227 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 28870378 Common - hypothetical protein PSPTO_3211 5 COG4304 COG4304, Uncharacterized protein conserved in bacteria Function unknown 28870695 Common - glycosyl hydrolase, family 5 PslG PSPTO_3534 10 COG3664 XynB, Beta-xylosidase Carbohydrate transport and metabolism 28868494 Common - TonB-dependent outer membrane heme receptor PSPTO_1284 130 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28871889 Common - ATP-dependent helicase, N-terminal domain protein PSPTO_4773 104 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 28872278 Common - hypothetical protein PSPTO_5166 25 COG5373 COG5373, Predicted membrane protein Function unknown 28871922 Common - metal ion transporter, putative PSPTO_4807 217 COG4535 CorC, Putative Mg2+ and Co2+ transporter CorC Inorganic ion transport and metabolism 28870547 Common - hypothetical protein PSPTO_3383 3 COG3212 COG3212, Predicted membrane protein Function unknown 28872426 Common ssuB aliphatic sulfonates transport ATP-binding subunit PSPTO_5314 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 28870124 Common - transcriptional regulator, MarR family PSPTO_2945 79 COG1846 MarR, Transcriptional regulators Transcription 28867590 Common thiI thiamine biosynthesis protein ThiI PSPTO_0360 94 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 28870825 Common - hypothetical protein PSPTO_3670 36 COG3748 COG3748, Predicted membrane protein Function unknown 28868939 Common bolA bolA protein PSPTO_1733 91 COG0271 BolA, Stress-induced morphogen (activity unknown) Signal transduction mechanisms 28869797 Common - TonB-dependent siderophore receptor, putative PSPTO_2607 104 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 28870788 Common ccmE cytochrome c-type biogenesis protein CcmE PSPTO_3631 94 COG2332 CcmE, Cytochrome c-type biogenesis protein CcmE Posttranslational modification, protein turnover, chaperones 28868666 Common purL phosphoribosylformylglycinamidine synthase PSPTO_1459 232 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 28871670 Common - peptide ABC transporter, ATP-binding protein PSPTO_4536 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869940 Common - HlyD family secretion protein PSPTO_2753 168 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28870893 Common - ABC transporter, permease protein PSPTO_3738 145 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 28871390 Common - DNA-binding protein PSPTO_4250 14 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 28870603 Common - low molecular weight phosphotyrosine protein phosphatase family protein PSPTO_3442 103 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 28867865 Common rplX 50S ribosomal protein L24 PSPTO_0637 212 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 28868406 Common - hypothetical protein PSPTO_1193 8 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 28868634 Common hscA chaperone protein HscA PSPTO_1427 234 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 28872067 Common motA-2 flagellar motor protein MotA PSPTO_4953 119 COG1291 MotA, Flagellar motor component Cell motility and secretion 28869810 Common - CBS domain protein PSPTO_2620 136 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 28872662 Common cysC adenylylsulfate kinase PSPTO_5557 144 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 28869565 Common rbsA-1 ribose ABC transporter, ATP-binding protein PSPTO_2368 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 28871523 Common - hypothetical protein PSPTO_4387 1 None None None 28871929 Common holA DNA polymerase III subunit delta PSPTO_4814 99 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 28868451 Common algK alginate biosynthesis protein AlgK PSPTO_1240 15 COG0790 COG0790, FOG: TPR repeat, SEL1 subfamily General function prediction only 28868622 Common secD preprotein translocase subunit SecD PSPTO_1415 202 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 28870700 Common - membrane protein, MviN family PSPTO_3539 41 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 28872251 Common argS arginyl-tRNA synthetase PSPTO_5138 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28869916 Common - hypothetical protein PSPTO_2729 53 COG3749 COG3749, Uncharacterized protein conserved in bacteria Function unknown 28870007 Common - hypothetical protein PSPTO_2822 25 COG3687 COG3687, Predicted metal-dependent hydrolase General function prediction only 28869843 Common - oxidoreductase, molybdopterin-binding subunit, putative PSPTO_2655 80 COG1319 CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs Energy production and conversion 28871441 Common - AcrB/AcrD/AcrF family protein PSPTO_4304 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28870672 Common - cell division inhibitor, putative PSPTO_3511 12 COG5404 SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation Cell division and chromosome partitioning 28867912 Common - hypothetical protein PSPTO_0684 2 None None None 28868268 Common dctP TRAP dicarboxylate transporter, DctP subunit PSPTO_1051 116 COG1638 DctP, TRAP-type C4-dicarboxylate transport system, periplasmic component Carbohydrate transport and metabolism 28869636 Common - methyl-accepting chemotaxis protein PSPTO_2441 168 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28867769 Common - hypothetical protein PSPTO_0541 170 COG0344 COG0344, Predicted membrane protein Function unknown 28871855 Common hrpB ATP-dependent helicase HrpB PSPTO_4735 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 28868780 Common - mechanosensitive ion channel family protein PSPTO_1574 59 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28868544 Common - transcriptional regulator, ArsR family PSPTO_1336 33 COG0640 ArsR, Predicted transcriptional regulators Transcription 28872511 Common - HAD-superfamily hydrolase PSPTO_5403 33 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 28870466 Common - AcrB/AcrD/AcrF family protein PSPTO_3302 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28868481 Common holC DNA polymerase III subunit chi PSPTO_1270 61 COG2927 HolC, DNA polymerase III, chi subunit DNA replication, recombination, and repair 28868997 Common - ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family PSPTO_1791 99 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28869711 Common - bacterial extracellular solute-binding domain protein PSPTO_2518 66 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 28869065 Common - hypothetical protein PSPTO_1860 24 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 28871155 Pathogen - hypothetical protein PSPTO_4012 1 None None None 28870540 Common nuoM NADH dehydrogenase subunit M PSPTO_3376 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 28871038 Common - EAL domain/GGDEF domain protein PSPTO_3886 169 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 28869652 Common - hypothetical protein PSPTO_2457 1 None None None 28872494 Common - hypothetical protein PSPTO_5386 1 None None None 28871748 Common eno-2 enolase PSPTO_4616 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 28870415 Common - dipeptide ABC transporter, permease protein DppC, putative PSPTO_3250 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869166 Common fliJ flagellar biosynthesis chaperone PSPTO_1962 40 COG2882 FliJ, Flagellar biosynthesis chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 28872352 Common - CDP-6-deoxy-delta-3,4-glucoseen reductase PSPTO_5240 93 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 28868213 Common - hypothetical protein PSPTO_0993 1 None None None 28867696 Common - methyl-accepting chemotaxis protein PSPTO_0466 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870246 Common - ABC transporter, ATP-binding/permease protein PSPTO_3071 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28868712 Common - ompA family protein PSPTO_1506 172 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28869848 Common - aldehyde dehydrogenase family protein PSPTO_2660 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28872147 Common pilH type IV pilus response regulator PilH PSPTO_5033 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870315 Common - nicotinamide mononucleotide transporter PnuC, putative PSPTO_3142 55 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 28872495 Common - stability cassette protein, putative PSPTO_5387 25 COG2026 RelE, Cytotoxic translational repressor of toxin-antitoxin stability system Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning 28867587 Common aroH chorismate mutase PSPTO_0357 15 COG1605 PheA, Chorismate mutase Amino acid transport and metabolism 28868276 Common - methyl-accepting chemotaxis protein PSPTO_1059 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28868390 Common cysZ putative sulfate transport protein CysZ PSPTO_1177 43 COG2981 CysZ, Uncharacterized protein involved in cysteine biosynthesis Amino acid transport and metabolism 28868772 Pathogen - hypothetical protein PSPTO_1566 1 None None None 28869945 Pathogen - hypothetical protein PSPTO_2759 1 None None None 28868678 Common - hypothetical protein PSPTO_1471 78 COG4137 COG4137, ABC-type uncharacterized transport system, permease component General function prediction only 28867994 Common - short chain dehydrogenase PSPTO_0766 205 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28869270 Common - hypothetical protein PSPTO_2066 1 None None None 28869724 Pathogen - hypothetical protein PSPTO_2531 1 None None None 28872361 Common ppx exopolyphosphatase PSPTO_5249 179 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 28870946 Common - rhomboid family protein PSPTO_3791 34 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 28871283 Common - helicase domain protein PSPTO_4141 131 COG1201 Lhr, Lhr-like helicases General function prediction only 28871847 Common - hypothetical protein PSPTO_4723 47 COG5470 COG5470, Uncharacterized conserved protein Function unknown 28869773 Common - glutamine amidotransferase, class-II protein PSPTO_2583 236 COG0067 GltB, Glutamate synthase domain 1 Amino acid transport and metabolism 28870904 Common - multiple antibiotic resistance protein MarR, putative PSPTO_3749 155 COG1846 MarR, Transcriptional regulators Transcription 28868303 Common - hypothetical protein PSPTO_1088 50 COG4804 COG4804, Uncharacterized conserved protein Function unknown 28871171 Pathogen - hypothetical protein PSPTO_4028 1 None None None 28870429 Common - transcriptional regulator, LysR family PSPTO_3265 98 COG0583 LysR, Transcriptional regulator Transcription 28867884 Common ssB single-strand DNA-binding protein PSPTO_0656 212 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 28870353 Common - hypothetical protein PSPTO_3183 145 COG1741 COG1741, Pirin-related protein General function prediction only 28869316 Common - hypothetical protein PSPTO_2113 1 None None None 28870679 Pathogen - hypothetical protein PSPTO_3518 1 None None None 28867367 Common algR alginate biosynthesis regulatory protein AlgR PSPTO_0127 222 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 28870147 Common - hypothetical protein PSPTO_2969 51 COG1309 AcrR, Transcriptional regulator Transcription 28870102 Common - nitrogen assimilation transcriptional regulator PSPTO_2923 184 COG0583 LysR, Transcriptional regulator Transcription 28869715 Common - ABC transporter, permease protein PSPTO_2522 227 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 28869341 Common - ABC transporter, periplasmic substrate-binding protein, putative PSPTO_2138 6 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 28869113 Common - decarboxylase family protein PSPTO_1909 44 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 28868371 Common - isochorismatase family protein PSPTO_1156 102 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 158146058 Common - hypothetical protein PSPTO_4574 8 None None None 28870703 Common - hypothetical protein PSPTO_3542 2 None None None 28872357 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_5245 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28870024 Common - ISPsy5, transposase PSPTO_2840 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867355 Common - multidrug efflux protein NorA PSPTO_0115 177 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 28870842 Common - L-sorbosone dehydrogenase PSPTO_3687 62 COG2133 COG2133, Glucose/sorbosone dehydrogenases Carbohydrate transport and metabolism 28872454 Common mutY A/G-specific adenine glycosylase PSPTO_5342 222 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 28869703 Common poxB pyruvate dehydrogenase PSPTO_2510 220 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 28868613 Pathogen hrpK1 type III helper protein HrpK1 PSPTO_1405 2 None None None 28872521 Pathogen - EF hand domain protein PSPTO_5413 5 None None None 28871581 Common - hypothetical protein PSPTO_4446 151 COG0767 Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component Secondary metabolites biosynthesis, transport, and catabolism 28869117 Pathogen - hypothetical protein PSPTO_1913 1 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28871496 Common - dehydrogenase, putative PSPTO_4360 106 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28871866 Common - hypothetical protein PSPTO_4750 2 None None None 28867463 Common - hypothetical protein PSPTO_0231 8 COG4742 COG4742, Predicted transcriptional regulator Transcription 28869292 Common - hypothetical protein PSPTO_2088 4 None None None 28867926 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase PSPTO_0698 224 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 28870420 Common - iron ABC transporter, periplasmic iron-binding protein, putative PSPTO_3256 85 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 28870035 Common - hypothetical protein PSPTO_2852 1 None None None 28869406 Common - ISPsy6, transposase PSPTO_2204 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869142 Pathogen - hypothetical protein PSPTO_1938 1 None None None 28868288 Pathogen - hypothetical protein PSPTO_1073 1 COG5305 COG5305, Predicted membrane protein Function unknown 28872579 Common rubA rubredoxin PSPTO_5474 107 COG1773 COG1773, Rubredoxin Energy production and conversion 28870012 Common - hypothetical protein PSPTO_2827 23 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 28867612 Common ligB NAD-dependent DNA ligase LigB PSPTO_0382 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 28869282 Common - hypothetical protein PSPTO_2078 2 None None None 28868057 Common - hypothetical protein PSPTO_0831 28 None None None 28867256 Pathogen - hypothetical protein PSPTO_0014 1 None None None 28869381 Common eda-2 2-dehydro-3-deoxy-6-phosphogalactonate aldolase PSPTO_2178 126 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 28870657 Common iolI iolI protein PSPTO_3496 15 COG4130 COG4130, Predicted sugar epimerase Carbohydrate transport and metabolism 28867494 Common - hypothetical protein PSPTO_0262 20 COG1943 COG1943, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871302 Common bfr bacterioferritin PSPTO_4160 102 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 28868359 Common - lipoprotein, putative PSPTO_1144 127 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 28872577 Common - DNA-binding protein HU family PSPTO_5472 209 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 28872306 Common - hypothetical protein PSPTO_5194 13 None None None 28872655 Common - ABC transporter, ATP-binding protein PSPTO_5550 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 28867863 Common rpsQ 30S ribosomal protein S17 PSPTO_0635 237 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 28867299 Common - transposase PSPTO_0058 55 None None None 28868916 Common - nitroreductase family protein PSPTO_1710 77 COG0778 NfnB, Nitroreductase Energy production and conversion 28871300 Common rnt ribonuclease T PSPTO_4158 71 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 28867715 Common - transcriptional repressor, LacI family PSPTO_0485 128 COG1609 PurR, Transcriptional regulators Transcription 28869557 Pathogen - hypothetical protein PSPTO_2360 1 None None None 28867724 Common bioB biotin synthetase PSPTO_0494 178 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 28867986 Common - oxidoreductase, 2OG-Fe(II) oxygenase family PSPTO_0758 55 COG3491 PcbC, Isopenicillin N synthase and related dioxygenases General function prediction only 28867846 Common rplL 50S ribosomal protein L7/L12 PSPTO_0618 212 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 28869124 Common - aminotransferase, DegT/DnrJ/EryC1/StrS family PSPTO_1920 193 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 28869618 Common - ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family PSPTO_2423 64 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28868165 Common terE tellurium resistance protein TerE PSPTO_0945 29 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 28872187 Common - amine oxidase, flavin-containing PSPTO_5074 39 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 28871486 Common - YceI-like family protein PSPTO_4350 11 COG2353 COG2353, Uncharacterized conserved protein Function unknown 28870327 Common - indolepyruvate ferredoxin oxidoreductase PSPTO_3155 94 COG4231 COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Energy production and conversion 28869176 Common fliP flagellar biosynthesis protein FliP PSPTO_1972 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 28868702 Common - chemotaxis protein methyltransferase CheR, putative PSPTO_1495 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 28871833 Pathogen - coronatine biosynthesis protein, putative PSPTO_4708 2 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28871986 Pathogen - hypothetical protein PSPTO_4871 1 None None None 28871724 Pathogen hopO1-3 type III effector HopO1-3 PSPTO_4592 1 None None None 28872638 Common - SPFH domain / Band 7 family protein PSPTO_5533 109 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 28871008 Common - ABC transporter, ATP-binding protein PSPTO_3855 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 28867606 Common - cation efflux family protein PSPTO_0376 142 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28867390 Common - lipoprotein, putative PSPTO_0150 1 None None None 28872461 Common - prevent-host-death family protein PSPTO_5349 16 COG4118 Phd, Antitoxin of toxin-antitoxin stability system Cell division and chromosome partitioning 28871662 Common - transcriptional regulator, AraC family PSPTO_4528 36 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28869087 Common - transcriptional regulator, LysR family PSPTO_1883 149 COG0583 LysR, Transcriptional regulator Transcription 28871178 Pathogen - hypothetical protein PSPTO_4035 1 None None None 28870174 Common - ribose ABC transporter, periplasmic ribose-binding protein, putative PSPTO_2996 76 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28869518 Pathogen - hypothetical protein PSPTO_2318 1 None None None 28870610 Common - capsular polysaccharide biosynthesis protein PSPTO_3449 182 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 28872135 Common - hypothetical protein PSPTO_5021 2 None None None 28869146 Common flgI flagellar basal body P-ring protein PSPTO_1942 105 COG1706 FlgI, Flagellar basal-body P-ring protein Cell motility and secretion 28870407 Common - TonB-dependent receptor, putative PSPTO_3242 53 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28867691 Common glyA-1 serine hydroxymethyltransferase PSPTO_0461 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 28872174 Common hopAN1 type III effector HopAN1 PSPTO_5061 57 COG3395 COG3395, Uncharacterized protein conserved in bacteria Function unknown 28869528 Common - response regulator PSPTO_2330 19 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28869086 Common - peptidase, M20/M25/M40 family PSPTO_1882 170 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 28870977 Common - hypothetical protein PSPTO_3823 50 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28869722 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSPTO_2529 156 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 28870982 Common - hypothetical protein PSPTO_3828 185 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 28868283 Common - hypothetical protein PSPTO_1068 4 None None None 28870300 Common malQ 4-alpha-glucanotransferase PSPTO_3127 119 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 28870209 Common - twitching motility protein PSPTO_3033 213 COG5008 PilU, Tfp pilus assembly protein, ATPase PilU Cell motility and secretion / Intracellular trafficking and secretion 28867910 Common - ABC transporter, ATP-binding protein PSPTO_0682 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 28867790 Common - polyamine ABC transporter, ATP-binding protein PSPTO_0562 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28868767 Common truD tRNA pseudouridine synthase D PSPTO_1561 86 COG0585 COG0585, Uncharacterized conserved protein Function unknown 28868984 Common htpX heat shock protein HtpX PSPTO_1778 192 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 28872586 Common - hypothetical protein PSPTO_5481 1 None None None 28870051 Pathogen - hypothetical protein PSPTO_2869 1 None None None 28871422 Common adhB alcohol dehydrogenase II PSPTO_4285 174 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 28867797 Common - autotransporting lipase, GDSL family PSPTO_0569 39 COG3240 COG3240, Phospholipase/lecithinase/hemolysin Lipid metabolism / General function prediction only 28869258 Common - hypothetical protein PSPTO_2054 1 None None None 28871837 Common cmaT coronamic acid synthetase, thioesterase component PSPTO_4712 49 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28869307 Common - hypothetical protein PSPTO_2103 101 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28868416 Common - RNA polymerase sigma-70 family protein PSPTO_1203 82 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28867254 Common - hypothetical protein PSPTO_0012 3 None None None 28868602 Common hrcS type III secretion protein HrcS PSPTO_1394 82 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 28870840 Common - methyl-accepting chemotaxis protein PSPTO_3685 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870279 Common gloA lactoylglutathione lyase PSPTO_3106 120 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 28868641 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase PSPTO_1434 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 28868863 Pathogen - hypothetical protein PSPTO_1657 2 None None None 28870897 Common cysS cysteinyl-tRNA synthetase PSPTO_3742 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28869433 Common - YD repeat protein PSPTO_2231 59 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870137 Common - hypothetical protein PSPTO_2959 17 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 28869925 Common - carboxyl transferase domain protein PSPTO_2738 145 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 28869893 Common - mannitol ABC transporter, permease protein PSPTO_2706 165 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 28872165 Common - putative deoxyribonucleotide triphosphate pyrophosphatase PSPTO_5051 236 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 28868627 Common - RNA methyltransferase, TrmH family, group 1 PSPTO_1420 157 COG0565 LasT, rRNA methylase Translation, ribosomal structure and biogenesis 28867782 Common - organic solvent tolerance protein, putative PSPTO_0554 121 COG1452 Imp, Organic solvent tolerance protein OstA Cell envelope biogenesis, outer membrane 28871639 Common dnaK molecular chaperone DnaK PSPTO_4505 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 28868841 Common - hypothetical protein PSPTO_1635 27 COG1598 COG1598, Uncharacterized conserved protein Function unknown 28869908 Common - hypothetical protein PSPTO_2721 103 COG0730 COG0730, Predicted permeases General function prediction only 28868532 Common dsbB disulfide bond formation protein B PSPTO_1324 29 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 28869460 Common - hypothetical protein PSPTO_2260 26 COG3535 COG3535, Uncharacterized conserved protein Function unknown 28867262 Pathogen - hypothetical protein PSPTO_0020 1 None None None 28869766 Common - peptide ABC transporter, permease protein PSPTO_2575 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28868689 Common - sensory box histidine kinase/response regulator PSPTO_1482 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28871258 Common pdxH pyridoxamine 5'-phosphate oxidase PSPTO_4116 132 COG0259 PdxH, Pyridoxamine-phosphate oxidase Coenzyme metabolism 28870168 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_2990 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28872614 Common - ISPsy8, transposase OrfB PSPTO_5509 148 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867770 Common folB-1 dihydroneopterin aldolase PSPTO_0542 95 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 28872114 Common waaP lipopolysaccharide core biosynthesis protein WaaP PSPTO_5000 10 None None None 28867425 Common glyS glycyl-tRNA synthetase subunit beta PSPTO_0185 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 28872082 Common - hypothetical protein PSPTO_4968 2 None None None 28872515 Common - oxidoreductase, molybdopterin-binding PSPTO_5407 172 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 28868878 Common - DNA-binding response regulator PSPTO_1672 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870839 Pathogen - hypothetical protein PSPTO_3684 1 None None None 28869695 Pathogen - hypothetical protein PSPTO_2502 1 None None None 28870347 Common - thermolysin metallopeptidase, putative PSPTO_3176 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 28867359 Common - peptidase, M16 family PSPTO_0119 144 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 28867516 Common - hypothetical protein PSPTO_0284 38 None None None 28870340 Pathogen - hypothetical protein PSPTO_3169 1 None None None 28870967 Common - cvpA family protein PSPTO_3812 86 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 28870276 Common - transcriptional regulator, putative PSPTO_3103 4 None None None 28867350 Common - metallo-beta-lactamase superfamily protein PSPTO_0110 187 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 28867373 Pathogen - hypothetical protein PSPTO_0133 1 None None None 28871072 Common - D-isomer specific 2-hydroxyacid dehydrogenase family protein PSPTO_3920 211 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 28868114 Common - lipoprotein, putative PSPTO_0894 2 None None None 28872492 Common - hypothetical protein PSPTO_5384 3 None None None 28871938 Common mltB membrane-bound lytic murein transglycosylase B PSPTO_4823 102 COG2951 MltB, Membrane-bound lytic murein transglycosylase B Cell envelope biogenesis, outer membrane 28868119 Common - hypothetical protein PSPTO_0899 5 None None None 28867659 Common ftsX putative protein insertion permease FtsX PSPTO_0429 105 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 28869546 Common aroE shikimate 5-dehydrogenase PSPTO_2348 209 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 28867528 Pathogen - hypothetical protein PSPTO_0297 1 None None None 28868163 Common terC tellurium resistance protein TerC PSPTO_0943 96 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 28869044 Common ribH riboflavin synthase subunit beta PSPTO_1839 150 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 28867466 Common rimK ribosomal protein S6 modification protein PSPTO_0234 148 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 28871976 Common accC-2 acetyl-CoA carboxylase biotin carboxylase subunit PSPTO_4861 231 COG0439 AccC, Biotin carboxylase Lipid metabolism 28867610 Common - hypothetical protein PSPTO_0380 27 COG3686 COG3686, Predicted membrane protein Function unknown 28870365 Common - transcriptional regulator, LysR family PSPTO_3196 163 COG0583 LysR, Transcriptional regulator Transcription 28871262 Common dinG ATP-dependent DNA helicase DinG PSPTO_4120 133 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 28870028 Common - hypothetical protein PSPTO_2844 1 None None None 28871493 Common - major facilitator family transporter PSPTO_4357 200 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872256 Common phaB poly(3-hydroxyalkanoate) depolymerase PSPTO_5144 126 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28868760 Common eno phosphopyruvate hydratase PSPTO_1554 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 28869424 Common - sensor histidine kinase PSPTO_2222 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28872127 Common - hypothetical protein PSPTO_5013 42 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 28870575 Common - hypothetical protein PSPTO_3411 7 None None None 28872424 Common - hypothetical protein PSPTO_5312 15 None None None 28871550 Common - cell division protein FtsL, putative PSPTO_4415 38 COG3116 FtsL, Cell division protein Cell division and chromosome partitioning 28870538 Common nouK NADH dehydrogenase subunit K PSPTO_3374 165 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 28870443 Common - methyl-accepting chemotaxis protein PSPTO_3279 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28867918 Common ribD riboflavin biosynthesis protein RibD PSPTO_0690 230 COG0117 RibD, Pyrimidine deaminase Coenzyme metabolism 28868302 Common - type I restriction-modification system, S subunit PSPTO_1087 65 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 28872196 Common mdcE malonate decarboxylase, gamma subunit PSPTO_5083 27 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 28869882 Common - hypothetical protein PSPTO_2694 123 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28871829 Pathogen hopAQ1 type III effector HopAQ1 PSPTO_4703 1 None None None 28871997 Common - hypothetical protein PSPTO_4882 8 None None None 28870495 Common - protease inhibitor Inh PSPTO_3331 4 None None None 28871230 Common - hypothetical protein PSPTO_4087 1 None None None 28869901 Common - protein-glutamate methylesterase, putative PSPTO_2714 151 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 28867592 Common - transcriptional regulator, DeoR family PSPTO_0362 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 28871361 Common lepB signal peptidase I PSPTO_4219 207 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 28872121 Common dbpA ATP-dependent RNA helicase DbpA PSPTO_5007 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 28872025 Common ureG-2 urease accessory protein UreG PSPTO_4911 124 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 28872030 Common - high affinity branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_4916 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28870631 Common - hypothetical protein PSPTO_3470 119 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 28867898 Common - ISPsy5, transposase PSPTO_0670 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869934 Common xthA exonuclease III PSPTO_2747 196 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 28868432 Common - hypothetical protein PSPTO_1219 13 None None None 28867650 Common - rhodanese-like domain protein PSPTO_0420 141 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 28870374 Common - dehydrogenase, isocitrate/isopropylmalate family PSPTO_3205 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 28869978 Common lexA-1 LexA repressor PSPTO_2792 174 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28869215 Common - autotransporter, putative PSPTO_2011 36 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28868722 Common - hypothetical protein PSPTO_1516 1 None None None 28872213 Common - 4-hydroxybenzoyl-CoA thioesterase domain protein PSPTO_5100 53 COG0824 FcbC, Predicted thioesterase General function prediction only 28867688 Common soxA-1 sarcosine oxidase, alpha subunit PSPTO_0458 180 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 28867815 Common - site-specific recombinase, phage integrase family PSPTO_0587 4 None None None 28871157 Common - transposase/IS protein PSPTO_4014 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869550 Common moeA molybdopterin biosynthesis protein MoeA PSPTO_2353 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 28872158 Common - NLP/P60 family protein PSPTO_5044 145 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 28872600 Common - hypothetical protein PSPTO_5495 1 None None None 28868893 Common arsC arsenate reductase PSPTO_1687 112 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 28867698 Common - hypothetical protein PSPTO_0468 3 None None None 28870180 Common xylA xylose isomerase PSPTO_3002 68 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 28869490 Common - hypothetical protein PSPTO_2290 55 COG2828 COG2828, Uncharacterized protein conserved in bacteria Function unknown 28872038 Common - transglutaminase-like domain protein PSPTO_4924 105 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 28869185 Common cheZ chemotaxis protein CheZ PSPTO_1981 45 COG3143 CheZ, Chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869891 Common uxuB D-mannonate oxidoreductase PSPTO_2703 91 COG0246 MtlD, Mannitol-1-phosphate/altronate dehydrogenases Carbohydrate transport and metabolism 28870454 Common - outer membrane porin, OprD family PSPTO_3290 11 None None None 162533078 Common hrcC outer-membrane type III secretion protein HrcC PSPTO_1389 111 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 28872317 Pathogen - hypothetical protein PSPTO_5205 1 None None None 28870468 Common - major facilitator family transporter PSPTO_3304 66 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870531 Common nuoCD bifunctional NADH:ubiquinone oxidoreductase subunit C/D PSPTO_3367 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 28867283 Pathogen - hypothetical protein PSPTO_0041 1 None None None 28870382 Common - ISPsy5, transposase PSPTO_3216 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867599 Common - outer membrane porin, OprD family PSPTO_0369 11 None None None 28871354 Common - methyltransferase, putative PSPTO_4212 48 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28868225 Pathogen - hypothetical protein PSPTO_1006 1 None None None 28871125 Common - hypothetical protein PSPTO_3980 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 28867634 Common - hypothetical protein PSPTO_0404 85 COG2961 ComJ, Protein involved in catabolism of external DNA General function prediction only 28868854 Common aer-1 aerotaxis receptor PSPTO_1648 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869011 Common - hypothetical protein PSPTO_1805 1 COG3678 CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism 28867267 Common - hydrolase, haloacid dehalogenase-like family PSPTO_0025 19 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 28871183 Pathogen - hypothetical protein PSPTO_4040 1 None None None 28871296 Common - hypothetical protein PSPTO_4154 1 None None None 28871946 Common - PAP2 superfamily protein/DedA family protein PSPTO_4831 151 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 28868008 Common - ISPssy, transposase PSPTO_0780 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869410 Common htpG heat shock protein 90 PSPTO_2208 150 COG0326 HtpG, Molecular chaperone, HSP90 family Posttranslational modification, protein turnover, chaperones 28871665 Common - methyl-accepting chemotaxis protein, putative PSPTO_4531 111 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869232 Common pyrF orotidine 5'-phosphate decarboxylase PSPTO_2028 153 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 28868447 Common algL poly(beta-D-mannuronate) lyase PSPTO_1236 4 None None None 28870817 Common - xanthine dehydrogenase accessory factor XdhC, putative PSPTO_3662 87 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 28872269 Common tatC sec-independent protein translocase TatC PSPTO_5157 205 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 28871528 Common - nucleotide-binding protein PSPTO_4393 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 28870942 Common - hypothetical protein PSPTO_3787 15 COG3789 COG3789, Uncharacterized protein conserved in bacteria Function unknown 28867326 Common radC DNA repair protein RadC PSPTO_0086 179 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 28867662 Common - hypothetical protein PSPTO_0432 71 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 28870424 Common - acetyltransferase, GNAT family PSPTO_3260 12 COG0456 RimI, Acetyltransferases General function prediction only 28868787 Common - hypothetical protein PSPTO_1581 18 COG4925 COG4925, Uncharacterized conserved protein Function unknown 28872564 Common - hypothetical protein PSPTO_5458 9 None None None 28869036 Common argR transcriptional regulator ArgR PSPTO_1831 147 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28870240 Common - hypothetical protein PSPTO_3065 82 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28868577 Pathogen shcN type III chaperone protein ShcN PSPTO_1369 1 None None None 28872607 Common - hypothetical protein PSPTO_5502 55 COG3781 COG3781, Predicted membrane protein Function unknown 28870880 Common clpX ATP-dependent protease ATP-binding subunit PSPTO_3725 224 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 28872167 Common - hypothetical protein PSPTO_5053 7 None None None 28872562 Common - hypothetical protein PSPTO_5456 4 None None None 28868516 Common - heavy metal sensor histidine kinase PSPTO_1306 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869501 Common nasA nitrate reductase PSPTO_2301 195 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 28868691 Common - DNA-binding response regulator, LuxR family PSPTO_1484 172 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28867474 Pathogen - hypothetical protein PSPTO_0242 1 None None None 28868126 Pathogen hopAI1 type III effector HopAI1 PSPTO_0906 4 None None None 28871853 Pathogen - hypothetical protein PSPTO_4733 1 None None None 28871966 Common - bacterial type II/III secretion system protein PSPTO_4851 138 COG4964 CpaC, Flp pilus assembly protein, secretin CpaC Intracellular trafficking and secretion 28872245 Common pilM type IV pilus biogenesis protein PilM PSPTO_5132 83 COG4972 PilM, Tfp pilus assembly protein, ATPase PilM Cell motility and secretion / Intracellular trafficking and secretion 28870486 Common - transcriptional regulator, LysR family PSPTO_3322 193 COG0583 LysR, Transcriptional regulator Transcription 28872555 Common - hypothetical protein PSPTO_5449 3 None None None 28870192 Common - hypothetical protein PSPTO_3016 20 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 28867536 Common - fatty acid desaturase PSPTO_0305 65 COG1398 OLE1, Fatty-acid desaturase Lipid metabolism 28871332 Pathogen - hypothetical protein PSPTO_4190 2 None None None 28869831 Common - sensor histidine kinase PSPTO_2642 207 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28868888 Common dctA-1 C4-dicarboxylate transporter DctA PSPTO_1682 161 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 28869743 Common - hypothetical protein PSPTO_2552 47 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 28868910 Common - NAD-dependent deacetylase PSPTO_1704 151 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 28871548 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase PSPTO_4413 210 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 28872485 Common - hypothetical protein PSPTO_5377 23 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 28868524 Common - ISPssy, transposase PSPTO_1315 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867311 Common - lipoprotein, putative PSPTO_0071 1 None None None 28868388 Common - hypothetical protein PSPTO_1175 5 None None None 28868347 Common - hypothetical protein PSPTO_1132 1 None None None 28871140 Common - abortive infection protein, internal deletion PSPTO_3995 17 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 28872206 Common - acyl carrier protein, putative PSPTO_5093 47 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28871372 Common - sensor histidine kinase TctE PSPTO_4230 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870326 Common cobM precorrin-4 C11-methyltransferase PSPTO_3154 202 COG2875 CobM, Precorrin-4 methylase Coenzyme metabolism 28868461 Common - CsgG family protein PSPTO_1250 32 COG1462 CsgG, Uncharacterized protein involved in formation of curli polymers Cell envelope biogenesis, outer membrane 28870797 Common - hypothetical protein PSPTO_3640 54 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 28870419 Common - transcriptional regulator, GntR family PSPTO_3254 138 COG2186 FadR, Transcriptional regulators Transcription 28867389 Common - hypothetical protein PSPTO_0149 22 None None None 162533085 Common truB tRNA pseudouridine synthase B PSPTO_4488 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 28869269 Common - enoyl-CoA hydratase PSPTO_2065 104 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 28868064 Common - major facilitator family transporter PSPTO_0838 108 COG0738 FucP, Fucose permease Carbohydrate transport and metabolism 28868427 Common - membrane protein PSPTO_1214 36 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 28872595 Common - aldose 1-epimerase family protein PSPTO_5490 53 COG0676 COG0676, Uncharacterized enzymes related to aldose 1-epimerase Carbohydrate transport and metabolism 28869131 Common - chemotaxis protein CheV, putative PSPTO_1927 186 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28868647 Common - putative aminotransferase PSPTO_1440 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28870016 Common syfC syringolide efflux protein SyfC PSPTO_2831 159 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28871712 Common - hypothetical protein PSPTO_4580 1 None None None 28872544 Common - Rhs element Vgr protein PSPTO_5436 60 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28869949 Common - autotransporter, putative PSPTO_2763 44 COG3468 AidA, Type V secretory pathway, adhesin AidA Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28871096 Common - site-specific recombinase, phage integrase family PSPTO_3949 143 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28870332 Common - protein kinase, putative PSPTO_3161 40 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 28869060 Common - TonB-dependent receptor, putative PSPTO_1855 105 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28872097 Common - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase PSPTO_4983 190 COG2870 RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase Cell envelope biogenesis, outer membrane 28869193 Common - hypothetical protein PSPTO_1989 9 None None None 28872348 Pathogen - hypothetical protein PSPTO_5236 1 None None None 28872264 Common ubiB ubiquinone biosynthesis protein UbiB PSPTO_5152 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 28867727 Common bioC biotin synthesis protein BioC PSPTO_0497 166 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28871279 Common - amino acid ABC transporter, permease protein PSPTO_4137 172 COG4215 ArtQ, ABC-type arginine transport system, permease component Amino acid transport and metabolism 28872088 Common - lipoprotein, putative PSPTO_4974 10 None None None 28871315 Common - amino acid ABC transporter, permease protein PSPTO_4173 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28872291 Common - D-cysteine desulfhydrase PSPTO_5179 71 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 28867522 Common - transposase/IS protein PSPTO_0291 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28868981 Common - ATP-dependent RNA helicase, DEAD box family PSPTO_1775 232 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 28868950 Common mtnA methylthioribose-1-phosphate isomerase PSPTO_1744 130 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 28871066 Common copA copper resistance protein A PSPTO_3914 124 COG2132 SufI, Putative multicopper oxidases Secondary metabolites biosynthesis, transport, and catabolism 28868653 Common xseA exodeoxyribonuclease VII large subunit PSPTO_1446 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 28871251 Common - high-affinity branched-chain amino acid ABC transporter, permease protein PSPTO_4109 150 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 28868905 Common purN phosphoribosylglycinamide formyltransferase PSPTO_1699 219 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 28869505 Common lsc-2 levansucrase PSPTO_2305 16 None None None 28867555 Common argA N-acetylglutamate synthase PSPTO_0324 185 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 28871454 Common - hypothetical protein PSPTO_4317 43 COG1714 COG1714, Predicted membrane protein/domain Function unknown 28867382 Pathogen - hypothetical protein PSPTO_0142 1 None None None 28869274 Common - cytochrome c2 PSPTO_2070 56 COG3474 COG3474, Cytochrome c2 Energy production and conversion 28869354 Common - TonB-dependent siderophore receptor, putative PSPTO_2151 92 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28872373 Common metI-2 D-methionine ABC transporter, permease protein PSPTO_5261 100 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 28872395 Common lgt prolipoprotein diacylglyceryl transferase PSPTO_5283 209 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 28867739 Common pqqD pyrroloquinoline quinone biosynthesis protein PqqD PSPTO_0510 14 None None None 28867904 Common - mechanosensitive ion channel family protein PSPTO_0676 118 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28871269 Common - hypothetical protein PSPTO_4127 87 COG3012 COG3012, Uncharacterized protein conserved in bacteria Function unknown 28871475 Common - hypothetical protein PSPTO_4338 65 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 28871326 Pathogen - hypothetical protein PSPTO_4184 1 None None None 28869552 Common - glutathione-regulated potassium-efflux system protein PSPTO_2355 186 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 28867548 Common gcvH glycine cleavage system protein H PSPTO_0317 185 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 28869677 Common - TonB-dependent siderophore receptor, putative PSPTO_2484 97 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 28870588 Pathogen - hypothetical protein PSPTO_3424 1 None None None 28870917 Common - von Willebrand factor type A domain protein PSPTO_3762 78 COG1240 ChlD, Mg-chelatase subunit ChlD Coenzyme metabolism 28867663 Common thiS sulfur carrier protein ThiS PSPTO_0433 71 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 28871627 Common secG preprotein translocase subunit SecG PSPTO_4493 11 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 28867622 Pathogen - hypothetical protein PSPTO_0392 1 None None None 28869467 Common - ABC transporter, ATP-binding protein PSPTO_2267 249 COG4181 COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component Secondary metabolites biosynthesis, transport, and catabolism 28867627 Common - iron-sulfur cluster-binding protein PSPTO_0397 84 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 28868177 Common phbA-1 acetyl-CoA acetyltransferase PSPTO_0957 169 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 28872286 Common nhaA-2 sodium-proton antiporter NhaA PSPTO_5174 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 28868237 Common - ISPsy5, Orf1 PSPTO_1019 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870465 Common - efflux transporter, RND family, MFP subunit PSPTO_3301 162 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28868737 Common - hypothetical protein PSPTO_1531 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28867732 Pathogen hopF2 type III effector HopF2 PSPTO_0502 2 None None None 28871026 Common minD septum site-determining protein MinD PSPTO_3873 137 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 28871717 Common - ATP-dependent protease, putative PSPTO_4585 104 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 28871722 Pathogen hopT2 type III effector HopT2 PSPTO_4590 1 None None None 28870591 Common - C-5 cytosine-specific DNA methylase family protein PSPTO_3427 28 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 28871804 Pathogen - hypothetical protein PSPTO_4672 1 None None None 28867648 Common - coniferyl aldehyde dehydrogenase PSPTO_0418 218 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28868334 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_1119 233 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 28868231 Common - TonB system transport protein PSPTO_1012 42 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28870993 Common - HAD-superfamily hydrolase PSPTO_3839 194 COG0546 Gph, Predicted phosphatases General function prediction only 28869337 Common - pyoverdine synthetase, thioesterase component PSPTO_2134 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28867316 Common - hypothetical protein PSPTO_0076 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 28869621 Common - ISPssy, transposase PSPTO_2426 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867945 Common - DNA-binding protein PSPTO_0717 24 None None None 28870503 Common - hypothetical protein PSPTO_3339 19 COG2923 DsrF, Uncharacterized protein involved in the oxidation of intracellular sulfur Inorganic ion transport and metabolism 28867297 Common - transposase/IS protein PSPTO_0056 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28867990 Common fecC iron-dicitrate transporter permease subunit PSPTO_0762 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 28869660 Common - major facilitator family transporter PSPTO_2467 41 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869026 Common phhB pterin-4-alpha-carbinolamine dehydratase PSPTO_1821 47 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 28869753 Common phnJ phosphonate metabolism protein PhnJ PSPTO_2562 45 COG3627 PhnJ, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 28871864 Common - hypothetical protein PSPTO_4747 2 None None None 28872017 Pathogen - hypothetical protein PSPTO_4902 1 None None None 28868969 Common - hypothetical protein PSPTO_1763 1 None None None 28868444 Common algF alginate biosynthesis protein AlgF PSPTO_1233 4 None None None 28872058 Common mutL DNA mismatch repair protein PSPTO_4944 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 28867304 Common - hypothetical protein PSPTO_0064 57 COG1639 COG1639, Predicted signal transduction protein Signal transduction mechanisms 28870683 Common - soluble lytic murein transglycosylase, putative PSPTO_3522 166 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 28868683 Common rplS 50S ribosomal protein L19 PSPTO_1476 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 28872209 Common - AMP-binding enzyme family protein PSPTO_5096 61 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 28871437 Common - drug resistance transporter, EmrB/QacA family PSPTO_4300 233 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870129 Common - sigma-54 dependent transcriptional regulator PSPTO_2951 170 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 28870545 Common - DNA-binding response regulator PSPTO_3381 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870568 Common - hypothetical protein PSPTO_3404 5 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 28869153 Common - flagellin PSPTO_1949 122 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 28867537 Common - sensory box/GGDEF domain/EAL domain protein PSPTO_0306 191 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28867530 Common - monooxygenase PSPTO_0299 54 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 28870109 Common - hypothetical protein PSPTO_2930 39 COG1359 COG1359, Uncharacterized conserved protein Function unknown 28871914 Common thiE thiamine-phosphate pyrophosphorylase PSPTO_4799 206 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 28872643 Common - dual specificity phosphatase, catalytic domain protein PSPTO_5538 23 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 28871229 Pathogen - hypothetical protein PSPTO_4086 1 None None None 28867391 Common - hypothetical protein PSPTO_0151 5 None None None 28868054 Common - competence lipoprotein ComL, putative PSPTO_0826 123 COG4105 ComL, DNA uptake lipoprotein General function prediction only 28868485 Common - cold shock domain family protein PSPTO_1274 176 COG1278 CspC, Cold shock proteins Transcription 28868881 Common - siderophore biosynthesis protein, putative PSPTO_1675 38 COG2977 EntD, Phosphopantetheinyl transferase component of siderophore synthetase Secondary metabolites biosynthesis, transport, and catabolism 28872072 Common - HAMP domain protein PSPTO_4958 1 COG3726 AhpA, Uncharacterized membrane protein affecting hemolysin expression General function prediction only 28870226 Common - 2,4'-dihydroxyacetophenone dioxygenase PSPTO_3051 16 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 28872010 Common ureC urease subunit alpha PSPTO_4895 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 28868504 Common - glucose ABC transporter, permease protein, putative PSPTO_1294 149 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 28867702 Common - response regulator PSPTO_0472 218 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28867722 Common - molybdate transport regulator ModE, putative PSPTO_0492 70 COG2005 ModE, N-terminal domain of molybdenum-binding protein General function prediction only 28869405 Common sucD succinyl-CoA synthetase subunit alpha PSPTO_2203 217 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 28868230 Common - acetyltransferase, GNAT family PSPTO_1011 119 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 28871806 Pathogen - hypothetical protein PSPTO_4674 1 None None None 28872660 Pathogen - hypothetical protein PSPTO_5555 1 None None None 28872508 Common - hypothetical protein PSPTO_5400 35 None None None 28868592 Common hrcJ type III secretion protein HrcJ PSPTO_1384 80 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 28871271 Common - hypothetical protein PSPTO_4129 7 None None None 28869884 Common - mutT/nudix family protein PSPTO_2696 103 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 28868092 Common - macrolide efflux protein, putative PSPTO_0871 118 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28871816 Common cfa6 coronafacic acid polyketide synthase I PSPTO_4686 222 COG3321 COG3321, Polyketide synthase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28868559 Pathogen - hypothetical protein PSPTO_1351 1 None None None 28868132 Common - methyl-accepting chemotaxis protein PSPTO_0912 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871055 Common - hypothetical protein PSPTO_3903 8 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 28871408 Common - ISPsy4, transposase PSPTO_4269 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869082 Common - ISPsy11, transposase OrfB PSPTO_1878 137 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868369 Common - hydrolase, alpha/beta fold family PSPTO_1154 57 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28869600 Common - transcriptional regulator, ArsR family PSPTO_2404 35 COG0640 ArsR, Predicted transcriptional regulators Transcription 28870643 Common - Rhs element Vgr protein PSPTO_3482 56 COG3501 VgrG, Uncharacterized protein conserved in bacteria Function unknown 28871381 Common - ABC transporter, permease protein PSPTO_4239 112 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 28871401 Common - isomerase, putative PSPTO_4261 78 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28868785 Common - major facilitator family transporter PSPTO_1579 88 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872653 Common - DNA-binding response regulator, LuxR family PSPTO_5548 215 COG4566 TtrR, Response regulator Signal transduction mechanisms 28870692 Common - lipoprotein PslD PSPTO_3531 13 COG1596 Wza, Periplasmic protein involved in polysaccharide export Cell envelope biogenesis, outer membrane 28867468 Common - EAL domain protein PSPTO_0236 163 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 28872405 Common - oxidoreductase, FAD-binding PSPTO_5293 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 28869957 Common - acetyltransferase, GNAT family PSPTO_2771 18 COG0456 RimI, Acetyltransferases General function prediction only 28868798 Common - hypothetical protein PSPTO_1592 1 None None None 28869991 Common - oxidoreductase, FAD-binding, putative PSPTO_2805 200 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 28872050 Common - methyl-accepting chemotaxis protein PSPTO_4936 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870889 Common - ISPsy6, transposase PSPTO_3734 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868029 Common creA creA protein PSPTO_0801 57 COG3045 CreA, Uncharacterized protein conserved in bacteria Function unknown 28871733 Common greB-2 transcription elongation factor GreB PSPTO_4601 140 COG0782 GreA, Transcription elongation factor Transcription 28871793 Common - acetyltransferase, GNAT family PSPTO_4661 108 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 28870923 Common - hypothetical protein PSPTO_3768 57 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 28870100 Common accC-1 acetyl-CoA carboxylase biotin carboxylase subunit PSPTO_2921 230 COG0439 AccC, Biotin carboxylase Lipid metabolism 28867906 Common - NAD-dependent epimerase/dehydratase family protein PSPTO_0678 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28870329 Common - hypothetical protein PSPTO_3157 7 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 28870222 Common - myo-inositol 2-dehydrogenase, putative PSPTO_3047 131 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 28868776 Pathogen - hypothetical protein PSPTO_1570 2 None None None 28867517 Common - hypothetical protein PSPTO_0285 3 None None None 28872435 Common - RNA methyltransferase, TrmH family, group 2 PSPTO_5323 159 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 28872227 Common - hypothetical protein PSPTO_5114 9 None None None 28869635 Common - acyl-CoA dehydrogenase family protein PSPTO_2440 104 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28871491 Common - hypothetical protein PSPTO_4355 33 COG3124 COG3124, Uncharacterized protein conserved in bacteria Function unknown 28868469 Common - amino acid ABC transporter, ATP-binding protein PSPTO_1258 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28869229 Common - hypothetical protein PSPTO_2025 2 None None None 28868919 Common cobQ cobyric acid synthase PSPTO_1713 155 COG1492 CobQ, Cobyric acid synthase Coenzyme metabolism 28868043 Common - type IV pilus-associated protein, putative PSPTO_0815 32 COG3419 PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 Cell motility and secretion / Intracellular trafficking and secretion 28868373 Common - transcriptional regulator, TetR family PSPTO_1158 89 COG1309 AcrR, Transcriptional regulator Transcription 28869820 Common - hypothetical protein PSPTO_2631 12 COG5553 COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily General function prediction only 28870952 Common - hypothetical protein PSPTO_3797 19 COG3782 COG3782, Uncharacterized protein conserved in bacteria Function unknown 28868311 Common - transposase/IS protein PSPTO_1096 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869870 Pathogen - hypothetical protein PSPTO_2682 1 None None None 28872236 Common gltB glutamate synthase subunit alpha PSPTO_5123 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 28870968 Common - hypothetical protein PSPTO_3813 9 COG3147 DedD, Uncharacterized protein conserved in bacteria Function unknown 28871159 Pathogen - hypothetical protein PSPTO_4016 1 None None None 28868741 Common tsf elongation factor Ts PSPTO_1535 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 28868833 Common - short chain dehydrogenase PSPTO_1627 237 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 28869429 Common - fimbrial protein, putative PSPTO_2227 14 COG3539 FimA, P pilus assembly protein, pilin FimA Cell motility and secretion / Intracellular trafficking and secretion 28870195 Common - oxidoreductase, Gfo/Idh/MocA family PSPTO_3019 160 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 28871112 Common - ISPsy5, Orf1 PSPTO_3966 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872467 Common gabP gamma-aminobutyrate permease PSPTO_5356 175 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 28870961 Common ilvA-1 threonine dehydratase PSPTO_3806 220 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 28868195 Common - pentapeptide repeat domain protein PSPTO_0975 7 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 28869662 Common - hypothetical protein PSPTO_2469 9 None None None 28870288 Common - hypothetical protein PSPTO_3115 1 None None None 28871751 Common - voltage-gated chloride channel family protein PSPTO_4619 163 COG0038 EriC, Chloride channel protein EriC Inorganic ion transport and metabolism 28870067 Pathogen - hypothetical protein PSPTO_2888 1 COG1733 COG1733, Predicted transcriptional regulators Transcription 28871395 Common - carboxymuconolactone decarboxylase family protein PSPTO_4255 73 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 28872392 Common cadR transcriptional regulator CadR PSPTO_5280 148 COG0789 SoxR, Predicted transcriptional regulators Transcription 28871970 Common - hypothetical protein PSPTO_4855 70 COG2064 TadC, Flp pilus assembly protein TadC Cell motility and secretion / Intracellular trafficking and secretion 28869079 Common fdH glutathione-dependent formaldehyde dehydrogenase PSPTO_1875 204 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 28868144 Common pilD type IV pilus prepilin peptidase PilD PSPTO_0924 133 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 28868995 Common - dimethylsulfoxide reductase PSPTO_1789 168 COG0243 BisC, Anaerobic dehydrogenases, typically selenocysteine-containing Energy production and conversion 28869447 Common kdpD sensor protein KdpD PSPTO_2245 217 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 28870064 Common - methyl-accepting chemotaxis protein PSPTO_2883 123 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871498 Common - transporter, LysE family PSPTO_4362 78 COG1279 COG1279, Lysine efflux permease General function prediction only 28870073 Common - lectin repeat domain protein PSPTO_2894 6 None None None 28869201 Common - hypothetical protein PSPTO_1997 20 COG3198 COG3198, Uncharacterized protein conserved in bacteria Function unknown 28871342 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_4200 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28870436 Common - hypothetical protein PSPTO_3272 12 None None None 28871041 Common - hypothetical protein PSPTO_3889 21 COG3339 COG3339, Uncharacterized conserved protein Function unknown 28869243 Common - isochorismatase family protein PSPTO_2039 95 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28871888 Common - hypothetical protein PSPTO_4772 17 None None None 28871532 Common - hypothetical protein PSPTO_4397 172 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 28869519 Common - resolvase, putative PSPTO_2319 122 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 28869198 Common - hypothetical protein PSPTO_1994 51 COG2836 COG2836, Uncharacterized conserved protein Function unknown 28867428 Common - nitrilase, putative PSPTO_0189 44 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28868256 Common - response regulator PSPTO_1039 211 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 28871679 Pathogen - hypothetical protein PSPTO_4545 1 None None None 28871968 Common - type II/IV secretion system protein, putative PSPTO_4853 227 COG4962 CpaF, Flp pilus assembly protein, ATPase CpaF Intracellular trafficking and secretion 28867792 Common - polyamine ABC transporter, permease protein PSPTO_0564 155 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 28871321 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase PSPTO_4179 142 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 28868033 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase PSPTO_0805 211 COG0196 RibF, FAD synthase Coenzyme metabolism 28867827 Common - hypothetical protein PSPTO_0599 47 COG2941 CAT5, Ubiquinone biosynthesis protein COQ7 Coenzyme metabolism 28867751 Common - hypothetical protein PSPTO_0522 46 COG3550 HipA, Uncharacterized protein related to capsule biosynthesis enzymes General function prediction only 28868751 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase PSPTO_1545 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 28869811 Common polB DNA polymerase II PSPTO_2621 64 COG0417 PolB, DNA polymerase elongation subunit (family B) DNA replication, recombination, and repair 28868442 Common - insecticidal toxin protein, putative PSPTO_1231 64 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28869016 Common - PHP domain protein PSPTO_1810 128 COG0613 COG0613, Predicted metal-dependent phosphoesterases (PHP family) General function prediction only 28871419 Pathogen - hypothetical protein PSPTO_4282 1 None None None 28871165 Common - hypothetical protein PSPTO_4022 31 COG4807 COG4807, Uncharacterized protein conserved in bacteria Function unknown 28869222 Common - cell developmental protein SirA PSPTO_2018 89 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 28870872 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_3717 162 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 28869535 Common pcaQ pca operon transcriptional activator PcaQ PSPTO_2337 130 COG0583 LysR, Transcriptional regulator Transcription 28868010 Common mmsA-2 methylmalonate-semialdehyde dehydrogenase PSPTO_0782 219 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28870122 Common vdh vanillin dehydrogenase PSPTO_2943 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28870895 Common - ABC transporter, ATP-binding protein PSPTO_3740 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 28867278 Common - ISPsy5, Orf1 PSPTO_0036 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867939 Pathogen - hypothetical protein PSPTO_0711 1 None None None 28868367 Common - HDIG domain protein PSPTO_1152 124 COG2206 COG2206, HD-GYP domain Signal transduction mechanisms 28868557 Common - hypothetical protein PSPTO_1349 97 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 28869738 Common - hypothetical protein PSPTO_2547 42 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 28867772 Common cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase PSPTO_0544 191 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 28871694 Common - outer membrane porin, OprD family PSPTO_4560 10 None None None 28868015 Common ggt gamma-glutamyltranspeptidase PSPTO_0787 148 COG0405 Ggt, Gamma-glutamyltransferase Amino acid transport and metabolism 28869471 Pathogen - hypothetical protein PSPTO_2271 1 None None None 28868594 Pathogen hrpE type III secretion protein HrpE PSPTO_1386 2 None None None 28872337 Common - hypothetical protein PSPTO_5225 10 None None None 28870777 Common - hypothetical protein PSPTO_3619 11 None None None 28868954 Common - prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase family protein PSPTO_1748 165 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 28869579 Common pheS phenylalanyl-tRNA synthetase subunit alpha PSPTO_2382 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 28871048 Pathogen - hypothetical protein PSPTO_3896 1 None None None 28870564 Common - baseplate assembly protein J PSPTO_3400 35 COG3948 COG3948, Phage-related baseplate assembly protein General function prediction only 28871862 Common - ATP-dependent helicase HrpB, putative PSPTO_4745 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 28872350 Common glpT sn-glycerol-3-phosphate transporter PSPTO_5238 70 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28869578 Common rplT 50S ribosomal protein L20 PSPTO_2381 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 28871878 Common - von Willebrand factor type A domain protein PSPTO_4762 28 COG4245 TerY, Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain General function prediction only 28871150 Common - hypothetical protein PSPTO_4007 12 COG4385 gpI, Bacteriophage P2-related tail formation protein General function prediction only 28869397 Common sdhC succinate dehydrogenase, cytochrome b556 subunit PSPTO_2195 89 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 28869372 Common - dihydrouridine synthase family protein PSPTO_2169 209 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 28867285 Pathogen hopK1 type III effector HopK1 PSPTO_0044 3 None None None 28871790 Common - hypothetical protein PSPTO_4658 11 None None None 28869395 Common - hypothetical protein PSPTO_2193 15 None None None 28871386 Common - amidase PSPTO_4244 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28870190 Common - ISPsy4, transposase PSPTO_3013 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869164 Common fliH flagellar assembly protein H PSPTO_1960 66 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 28868865 Common - ISPsy4, transposase PSPTO_1659 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871539 Common ftsA cell division protein FtsA PSPTO_4404 193 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 28869178 Common fliR flagellar biosynthesis protein FliR PSPTO_1974 128 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 28871786 Common trmA tRNA (uracil-5-)-methyltransferase PSPTO_4654 186 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 28872107 Common - hypothetical protein PSPTO_4993 1 None None None 28869531 Common - hypothetical protein PSPTO_2333 2 COG5393 COG5393, Predicted membrane protein Function unknown 28868014 Common - DNA-binding response regulator PSPTO_0786 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28870294 Common zwf-2 glucose-6-phosphate 1-dehydrogenase PSPTO_3121 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 28868476 Common ndpA nucleoid-associated protein NdpA PSPTO_1265 31 COG3081 COG3081, Nucleoid-associated protein General function prediction only 28868805 Common - acetyltransferase, GNAT family PSPTO_1599 3 None None None 28871778 Common - hypothetical protein PSPTO_4646 4 None None None 28872633 Common - N-acetylmuramoyl-L-alanine amidase, family 3 PSPTO_5528 178 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 28868429 Common - transcriptional regulator, LysR family PSPTO_1216 104 COG0583 LysR, Transcriptional regulator Transcription 28870472 Pathogen - general secretion pathway protein N, putative PSPTO_3308 1 None None None 28870802 Common dnaZX DNA polymerase III subunits gamma and tau PSPTO_3646 248 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 28867806 Common - hypothetical protein PSPTO_0578 9 None None None 28872681 Common - sodium:bile acid symporter family protein PSPTO_5580 36 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 28868582 Pathogen shcM type III chaperone ShcM PSPTO_1374 1 None None None 28868912 Common - lipoprotein, putative PSPTO_1706 140 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 28871339 Common - hypothetical protein PSPTO_4197 18 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 28869320 Common - response regulator PSPTO_2117 226 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 28869129 Common - negative regulator of flagellin synthesis FlgM, putative PSPTO_1925 12 COG2747 FlgM, Negative regulator of flagellin synthesis (anti-sigma28 factor) Transcription / Cell motility and secretion / Intracellular trafficking and secretion 28869592 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_2396 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868028 Common proB gamma-glutamyl kinase PSPTO_0800 190 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 28868502 Common - glucose ABC transporter, periplasmic glucose-binding protein, putative PSPTO_1292 64 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28870368 Common - bacterial luciferase family protein PSPTO_3199 79 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28870324 Common - hypothetical protein PSPTO_3151 10 None None None 28868437 Common - hypothetical protein PSPTO_1224 1 None None None 28867405 Common - sulfatase family protein PSPTO_0165 94 COG3119 AslA, Arylsulfatase A and related enzymes Inorganic ion transport and metabolism 28867302 Common - citrate transporter PSPTO_0062 76 COG2851 CitM, H+/citrate symporter Energy production and conversion 28870439 Common - transcriptional regulator, LysR family PSPTO_3275 191 COG0583 LysR, Transcriptional regulator Transcription 28867675 Common - regulatory protein, putative PSPTO_0445 45 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 28868386 Common - oxidoreductase, FAD/FMN-binding PSPTO_1173 177 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28871218 Common - branched-chain amino acid ABC transporter, ATP-binding protein PSPTO_4075 249 COG4674 COG4674, Uncharacterized ABC-type transport system, ATPase component General function prediction only 28869367 Common uvrB excinuclease ABC subunit B PSPTO_2164 230 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 28871659 Pathogen - hypothetical protein PSPTO_4525 1 None None None 28867954 Common eutC ethanolamine ammonia-lyase small subunit PSPTO_0726 54 COG4302 EutC, Ethanolamine ammonia-lyase, small subunit Amino acid transport and metabolism 28867484 Common - peptide ABC transporter, ATP-binding protein PSPTO_0252 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 28872417 Common - ISPsy5, Orf1 PSPTO_5305 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868151 Pathogen - hypothetical protein PSPTO_0931 1 None None None 28869115 Common - response regulator/TPR domain protein PSPTO_1911 80 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28871727 Pathogen - hypothetical protein PSPTO_4595 1 None None None 28872572 Common - hypothetical protein PSPTO_5467 3 None None None 28867855 Common rplD 50S ribosomal protein L4 PSPTO_0627 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 28871017 Common psyI autoinducer synthesis protein PsyI PSPTO_3864 25 COG3916 LasI, N-acyl-L-homoserine lactone synthetase Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 28867762 Common - ISPssy, transposase PSPTO_0534 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869859 Common - transcriptional regulator, GntR family PSPTO_2671 138 COG1802 GntR, Transcriptional regulators Transcription 28871601 Common - hydrolase, carbon-nitrogen family PSPTO_4466 197 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28867377 Common - hypothetical protein PSPTO_0137 14 COG5589 COG5589, Uncharacterized conserved protein Function unknown 28868182 Common folK-2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase PSPTO_0962 176 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 28870752 Common - ATPase, putative PSPTO_3592 98 COG1485 COG1485, Predicted ATPase General function prediction only 28872677 Common - ISPsy4, transposase PSPTO_5575 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871200 Common - site-specific recombinase, phage integrase family PSPTO_4057 63 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28869204 Common - prevent-host-death family protein PSPTO_2000 18 None None None 28869613 Common - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_2418 138 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28871820 Common cfa9 CFA synthetase, thioesterase component PSPTO_4690 50 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28867566 Common - sensory box histidine kinase PSPTO_0335 220 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 28870573 Common clpP-1 ATP-dependent Clp protease, proteolytic subunit ClpP PSPTO_3409 38 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 28868206 Common - putative sulfite oxidase subunit YedZ PSPTO_0986 73 COG2717 COG2717, Predicted membrane protein Function unknown 28868816 Common - TonB-dependent siderophore receptor, putative PSPTO_1610 92 COG4773 FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid Inorganic ion transport and metabolism 28868352 Pathogen - hypothetical protein PSPTO_1137 1 None None None 28867553 Common - adenylate cyclase PSPTO_0322 47 COG3025 COG3025, Uncharacterized conserved protein Function unknown 28869706 Pathogen - hypothetical protein PSPTO_2513 1 None None None 28870511 Common - recombination factor protein RarA PSPTO_3347 234 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 28867850 Common rpsG 30S ribosomal protein S7 PSPTO_0622 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 28868710 Common - lipoprotein, putative PSPTO_1504 94 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 28867321 Common - hypothetical protein PSPTO_0081 7 None None None 28867747 Common - tryptophan 2-monooxygenase, putative PSPTO_0518 18 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 28871104 Common - hypothetical protein PSPTO_3957 99 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 28867357 Common - methyl-accepting chemotaxis protein PSPTO_0117 169 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28872040 Common - transglutaminase-like superfamily domain protein PSPTO_4926 87 COG4196 COG4196, Uncharacterized protein conserved in bacteria Function unknown 28869111 Common pobA 4-hydroxybenzoate 3-monooxygenase PSPTO_1907 51 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 28870731 Pathogen - hypothetical protein PSPTO_3571 1 None None None 28867810 Common - hypothetical protein PSPTO_0582 2 None None None 28867897 Common - ISPsy5, Orf1 PSPTO_0669 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871010 Common fadE acyl-CoA dehydrogenase PSPTO_3857 156 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28867740 Common pqqC pyrroloquinoline quinone biosynthesis protein PqqC PSPTO_0511 39 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 28867887 Common - inositol monophosphatase family protein PSPTO_0659 185 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 28872049 Common vacB ribonuclease R PSPTO_4935 197 COG0557 VacB, Exoribonuclease R Transcription 28867924 Common ribA GTP cyclohydrolase II PSPTO_0696 195 COG0807 RibA, GTP cyclohydrolase II Coenzyme metabolism 28870749 Common - transporter, putative PSPTO_3589 60 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28871309 Common glpF glycerol uptake facilitator protein PSPTO_4167 134 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 28869416 Common - hypothetical protein PSPTO_2214 4 None None None 28872452 Common - MFS permease-like protein PSPTO_5340 76 None None None 28868978 Common - phospho-2-dehydro-3-deoxyheptonate aldolase, class II PSPTO_1772 73 COG3200 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 28869555 Common - hypothetical protein PSPTO_2358 48 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 28871608 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C PSPTO_4473 145 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 28867588 Common - ISPsy6, transposase PSPTO_0358 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867410 Common hemF coproporphyrinogen III oxidase PSPTO_0170 112 COG0408 HemF, Coproporphyrinogen III oxidase Coenzyme metabolism 28870145 Common - hypothetical protein PSPTO_2967 12 COG5642 COG5642, Uncharacterized conserved protein Function unknown 28871225 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_4082 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28871514 Pathogen - hypothetical protein PSPTO_4378 1 None None None 28869107 Pathogen - hypothetical protein PSPTO_1903 1 None None None 28872355 Common trx-2 thioredoxin PSPTO_5243 232 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 28868895 Common - lipoprotein, putative PSPTO_1689 20 COG3187 HslJ, Heat shock protein Posttranslational modification, protein turnover, chaperones 28870936 Common - hypothetical protein PSPTO_3781 1 COG5463 COG5463, Predicted integral membrane protein Function unknown 28869794 Common - ABC transporter, ATP-binding/permease protein PSPTO_2604 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28869343 Common - cation ABC transporter, ATP-binding protein PSPTO_2140 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 28871233 Common - ABC transporter, ATP-binding/permease protein PSPTO_4091 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28868299 Common - integrase/recombinase XerD, putative PSPTO_1084 184 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28870686 Common - hypothetical protein PSPTO_3525 1 None None None 28867822 Common trpC indole-3-glycerol-phosphate synthase PSPTO_0594 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 28870701 Common - transcriptional regulator, LysR family PSPTO_3540 177 COG0583 LysR, Transcriptional regulator Transcription 28872270 Common - hypothetical protein PSPTO_5158 34 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 28871953 Pathogen - hypothetical protein PSPTO_4838 1 None None None 28867454 Common xerC site-specific tyrosine recombinase XerC PSPTO_0222 230 COG4973 XerC, Site-specific recombinase XerC DNA replication, recombination, and repair 28867880 Common rplQ 50S ribosomal protein L17 PSPTO_0652 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 28868828 Common - glycine betaine-binding protein, putative PSPTO_1622 68 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 28868453 Common - alginate biosynthesis protein Alg8 PSPTO_1242 6 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28867492 Common - hypothetical protein PSPTO_0260 7 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 28869279 Common - hypothetical protein PSPTO_2075 10 None None None 28871977 Common prmA ribosomal protein L11 methyltransferase PSPTO_4862 174 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 28871835 Common - coronamic acid synthetase, chlorinating enzyme component, putative PSPTO_4710 15 COG5285 COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin Secondary metabolites biosynthesis, transport, and catabolism 28869788 Common irp4 yersiniabactin synthetase, thioesterase component PSPTO_2598 49 COG3208 GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 28869701 Common - hypothetical protein PSPTO_2508 127 COG1733 COG1733, Predicted transcriptional regulators Transcription 28867397 Common trpI trpBA operon transcriptional activator PSPTO_0157 157 COG0583 LysR, Transcriptional regulator Transcription 28869122 Common - glycosyl transferase, group 2 family protein PSPTO_1918 126 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 28871006 Common - hypothetical protein PSPTO_3853 2 None None None 28872387 Common hutH histidine ammonia-lyase PSPTO_5275 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 28868719 Common - hypothetical protein PSPTO_1513 37 COG3921 COG3921, Uncharacterized protein conserved in bacteria Function unknown 28870553 Common - lysozyme, putative PSPTO_3389 34 COG3179 COG3179, Predicted chitinase General function prediction only 28867457 Common lsyA-2 diaminopimelate decarboxylase PSPTO_0225 217 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 28867984 Common - transcriptional regulator, putative PSPTO_0756 34 COG0640 ArsR, Predicted transcriptional regulators Transcription 28867746 Common - hydrolase, carbon-nitrogen family PSPTO_0517 205 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28871567 Common cysN/C bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein PSPTO_4432 249 COG2895 CysN, GTPases - Sulfate adenylate transferase subunit 1 Inorganic ion transport and metabolism 28869685 Common - oxidoreductase, short-chain dehydrogenase/reductase family PSPTO_2492 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28871081 Pathogen - hypothetical protein PSPTO_3931 1 None None None 28868271 Common - outer membrane porin, OprD family PSPTO_1054 7 None None None 28868055 Common - hypothetical protein PSPTO_0828 157 COG1496 COG1496, Uncharacterized conserved protein Function unknown 28868294 Common rfbA glucose-1-phosphate thymidylyltransferase PSPTO_1079 233 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 28869058 Pathogen - hypothetical protein PSPTO_1853 1 None None None 28871173 Common - hypothetical protein PSPTO_4030 1 None None None 28868886 Common phoQ sensor protein PhoQ PSPTO_1680 212 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869705 Pathogen - hypothetical protein PSPTO_2512 1 None None None 28870493 Common tliE ABC transporter, periplasmic substrate-binding protein PSPTO_3329 116 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 28870624 Common pssA phosphatidylserine synthase PSPTO_3463 34 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 28872368 Common - sulfate transporter family protein PSPTO_5256 154 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 28871119 Common tolR-2 tolR protein PSPTO_3974 130 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28871611 Common - rplA family protein PSPTO_4476 137 COG0797 RlpA, Lipoproteins Cell envelope biogenesis, outer membrane 28872534 Common - hypothetical protein PSPTO_5426 45 COG3520 COG3520, Uncharacterized protein conserved in bacteria Function unknown 28871410 Common - hypothetical protein PSPTO_4272 5 None None None 28870014 Common syfA non-ribosomal peptide synthetase SyfA PSPTO_2829 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28867860 Common rpsC 30S ribosomal protein S3 PSPTO_0632 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 28870098 Common - urea amidolyase-related protein PSPTO_2919 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 28870376 Common - ISPssy, transposase PSPTO_3208 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28870742 Common katB catalase PSPTO_3582 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 28868975 Common - hypothetical protein PSPTO_1769 7 COG0730 COG0730, Predicted permeases General function prediction only 28871420 Common pnlA pectin lyase PSPTO_4283 4 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 28867292 Common - hypothetical protein PSPTO_0051 3 COG2948 VirB10, Type IV secretory pathway, VirB10 components Intracellular trafficking and secretion 28869347 Common - hypothetical protein PSPTO_2144 4 None None None 28869386 Common - transcriptional regulator, AraC family PSPTO_2183 73 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28868774 Pathogen hopAF1 type III effector HopAF1 PSPTO_1568 2 None None None 28872330 Common - hypothetical protein PSPTO_5218 55 COG3545 COG3545, Predicted esterase of the alpha/beta hydrolase fold General function prediction only 28870823 Common - allantoicase PSPTO_3668 15 COG4266 Alc, Allantoicase Nucleotide transport and metabolism 28872149 Common gshB glutathione synthetase PSPTO_5035 121 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 28871526 Common - ISPsy5, Orf1 PSPTO_4390 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868411 Pathogen - hypothetical protein PSPTO_1198 1 None None None 28872694 Common glmS D-fructose-6-phosphate amidotransferase PSPTO_5595 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 28867877 Common rpsK 30S ribosomal protein S11 PSPTO_0649 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 28870905 Common - hypothetical protein PSPTO_3750 40 COG4445 MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 28872401 Common rpiA ribose-5-phosphate isomerase A PSPTO_5289 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 28871247 Common - major facilitator family transporter PSPTO_4105 97 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28868946 Common - short chain dehydrogenase PSPTO_1740 223 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28872272 Common - methyl-accepting chemotaxis protein PSPTO_5160 143 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870989 Common rpmF 50S ribosomal protein L32 PSPTO_3835 96 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 28870021 Common - ISPssy, transposase PSPTO_2836 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28871445 Common catJ 3-oxoadipate:succinyl-CoA transferase, subunit B PSPTO_4308 102 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 28869094 Common gabT-3 4-aminobutyrate aminotransferase PSPTO_1890 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 28870430 Common pstB-1 phosphate ABC transporter, ATP-binding protein PSPTO_3266 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 28868612 Common hrpL RNA polymerase sigma factor HrpL PSPTO_1404 156 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28870601 Common - polysaccharide biosynthesis protein, putative PSPTO_3440 39 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 28868139 Common - MOSC domain protein PSPTO_0919 28 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 28869272 Common - hypothetical protein PSPTO_2068 16 None None None 28868990 Common - GAF domain protein PSPTO_1784 83 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 28869440 Pathogen - lipoprotein, putative PSPTO_2238 1 None None None 28869486 Common - transcriptional regulator, GntR family PSPTO_2286 136 COG1802 GntR, Transcriptional regulators Transcription 28870764 Common - heavy metal sensor histidine kinase PSPTO_3604 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869431 Common papD chaperone protein PapD PSPTO_2229 24 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 28869942 Common - outer membrane efflux protein PSPTO_2756 121 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28871260 Pathogen - hypothetical protein PSPTO_4118 1 None None None 28872528 Common - hypothetical protein PSPTO_5420 49 COG3522 COG3522, Uncharacterized protein conserved in bacteria Function unknown 28869005 Common - Ser/Thr protein phosphatase family protein PSPTO_1799 67 COG2908 COG2908, Uncharacterized protein conserved in bacteria Function unknown 28872005 Common ureD-2 urease accessory protein UreD PSPTO_4890 84 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 28868928 Pathogen - hypothetical protein PSPTO_1722 1 None None None 28871506 Common - hypothetical protein PSPTO_4370 1 None None None 28871631 Common ftsH cell division protein FtsH PSPTO_4497 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 28869852 Common - spermidine/putrescine ABC transporter, ATP-binding protein PSPTO_2664 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28871484 Pathogen - hypothetical protein PSPTO_4348 1 None None None 28870313 Common - hypothetical protein PSPTO_3140 51 COG3326 COG3326, Predicted membrane protein Function unknown 28868620 Common tgt queuine tRNA-ribosyltransferase PSPTO_1413 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 28869063 Common - hypothetical protein PSPTO_1858 45 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 28871429 Common - sigma-54 dependent transcriptional regulator/response regulator PSPTO_4292 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28870053 Common - hypothetical protein PSPTO_2871 14 COG4457 SrfB, Uncharacterized protein conserved in bacteria, putative virulence factor Function unknown 28870533 Common nuoF NADH dehydrogenase I subunit F PSPTO_3369 169 COG1894 NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit Energy production and conversion 28869947 Common - alpha-amylase family protein PSPTO_2761 169 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 28869936 Common - hypothetical protein PSPTO_2749 127 COG0729 COG0729, Outer membrane protein Cell envelope biogenesis, outer membrane 28867464 Common - hypothetical protein PSPTO_0232 5 None None None 28868483 Common - hypothetical protein PSPTO_1272 114 COG0795 COG0795, Predicted permeases General function prediction only 28869914 Pathogen - hypothetical protein PSPTO_2727 1 None None None 28868932 Pathogen - hypothetical protein PSPTO_1726 1 None None None 28871443 Common pcaT dicarboxylic acid transport protein PSPTO_4306 119 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870522 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase PSPTO_3358 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 28869654 Common - ISPsy5, transposase PSPTO_2460 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872142 Common - hypothetical protein PSPTO_5028 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 28870674 Common - hypothetical protein PSPTO_3513 1 None None None 28869713 Common - pyridine nucleotide-disulphide oxidoreductase family protein PSPTO_2520 71 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 28872253 Common hslV ATP-dependent protease peptidase subunit PSPTO_5140 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 28872570 Common - acetyl-CoA hydrolase/transferase family protein PSPTO_5465 96 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 28872060 Common - hypothetical protein PSPTO_4946 208 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 28870355 Common - sodium:solute symporter family protein PSPTO_3186 146 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 28868803 Common - ribonuclease BN, putative PSPTO_1597 120 COG1295 Rbn, Predicted membrane protein Function unknown 28870262 Pathogen hopAB2 type III effector HopAB2 PSPTO_3087 1 None None None 28868457 Common - PhoH-like protein PSPTO_1246 199 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 28867767 Common rpsU 30S ribosomal protein S21 PSPTO_0539 105 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 28870235 Common - glycine betaine/L-proline ABC transporter, ATP-binding protein PSPTO_3060 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 28871219 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_4076 147 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 28867280 Common - hypothetical protein PSPTO_0038 34 COG1479 COG1479, Uncharacterized conserved protein Function unknown 28867996 Common - ABC transporter, permease protein, putative PSPTO_0768 74 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 28871996 Common - hypothetical protein PSPTO_4881 79 COG2847 COG2847, Uncharacterized protein conserved in bacteria Function unknown 28870266 Common - nickel ABC transporter, ATP-binding protein, putative PSPTO_3091 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 28870280 Common ahpF alkyl hydroperoxide reductase, subunit F PSPTO_3107 246 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 28869584 Common - ISPsy4, transposase PSPTO_2387 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872069 Common psd bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase PSPTO_4955 181 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 28872220 Common - 3-oxoacyl-(acyl carrier protein) synthase I PSPTO_5107 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28868074 Common - dnaK suppressor protein, putative PSPTO_0853 111 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 28870249 Common - transcriptional regulator, AraC family PSPTO_3074 120 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28870618 Common - short-chain fatty acid transporter PSPTO_3457 39 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 28872203 Common - ParA family protein PSPTO_5090 210 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28868638 Common - radical SAM enzyme, Cfr family PSPTO_1431 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 28867641 Common - hypothetical protein PSPTO_0411 7 None None None 28871407 Common - transcriptional regulator, TetR family PSPTO_4267 52 COG1309 AcrR, Transcriptional regulator Transcription 28868657 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein PSPTO_1450 239 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 28870784 Common - lipoprotein, putative PSPTO_3626 1 None None None 28867584 Pathogen - hypothetical protein PSPTO_0354 1 None None None 28869174 Common fliN flagellar motor switch protein PSPTO_1970 122 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 28868813 Common - hypothetical protein PSPTO_1607 1 None None None 28868922 Common - alpha-ribazole-5'-phosphate phosphatase, putative PSPTO_1716 119 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 28867799 Common - repressor protein c2 PSPTO_0571 33 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28869481 Common - hydrolase, haloacid dehalogenase-like family PSPTO_2281 18 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 28869675 Common exbB-3 TonB system transport protein ExbB PSPTO_2482 143 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28871604 Common maf Maf-like protein PSPTO_4469 193 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 28869465 Common greB transcription elongation factor GreB PSPTO_2265 198 COG0782 GreA, Transcription elongation factor Transcription 28871893 Common - glutathione S-transferase family protein PSPTO_4777 96 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28871715 Common - hypothetical protein PSPTO_4583 55 COG2862 COG2862, Predicted membrane protein Function unknown 28872194 Common - acyl-carrier-protein S-malonyltransferase PSPTO_5081 208 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 28870665 Common - endonuclease/exonuclease/phosphatase family protein PSPTO_3504 64 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 28869998 Common - peptide ABC transporter, ATP-binding protein PSPTO_2812 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 28870792 Common ccmA heme exporter protein CcmA PSPTO_3635 249 COG4133 CcmA, ABC-type transport system involved in cytochrome c biogenesis, ATPase component Posttranslational modification, protein turnover, chaperones 28871874 Pathogen - hypothetical protein PSPTO_4758 1 None None None 28868686 Common dsbC thiol:disulfide interchange protein DsbC PSPTO_1479 70 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 28867549 Common - hypothetical protein PSPTO_0318 3 None None None 28869488 Common prpC methylcitrate synthase PSPTO_2288 194 COG0372 GltA, Citrate synthase Energy production and conversion 28872552 Pathogen - hypothetical protein PSPTO_5446 1 None None None 28870645 Common - lipoprotein, putative PSPTO_3484 1 None None None 28872587 Common - response regulator PSPTO_5482 220 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28867558 Common - S1 RNA binding domain protein PSPTO_0327 183 COG2183 Tex, Transcriptional accessory protein Transcription 28869475 Common aroF-1 phospho-2-dehydro-3-heoxyheptonate aldolase PSPTO_2275 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 28869508 Pathogen - hypothetical protein PSPTO_2308 1 None None None 28869290 Common - hypothetical protein PSPTO_2086 5 None None None 28869264 Common - hypothetical protein PSPTO_2060 82 COG2307 COG2307, Uncharacterized protein conserved in bacteria Function unknown 162533083 Common rluA ribosomal large subunit pseudouridine synthase A PSPTO_3875 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 28870949 Pathogen - hypothetical protein PSPTO_3794 1 None None None 28871667 Common nhaA-1 sodium-proton antiporter NhaA PSPTO_4533 106 COG3004 NhaA, Na+/H+ antiporter Inorganic ion transport and metabolism 28870660 Common - iolE protein PSPTO_3499 65 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 28868572 Common - hypothetical protein PSPTO_1364 14 COG5485 COG5485, Predicted ester cyclase General function prediction only 28868491 Common - hypothetical protein PSPTO_1281 1 None None None 28867969 Common - hypothetical protein PSPTO_0741 40 COG1694 MazG, Predicted pyrophosphatase General function prediction only 28868467 Common - amino acid ABC transporter, permease protein PSPTO_1256 168 COG4597 BatB, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28867532 Common gabT-2 4-aminobutyrate aminotransferase PSPTO_0301 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 28867539 Common sbp sulfate-binding protein PSPTO_0308 92 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 28867348 Common - hypothetical protein PSPTO_0108 18 COG0730 COG0730, Predicted permeases General function prediction only 28868870 Common - hypothetical protein PSPTO_1664 25 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 28870543 Common - methyl-accepting chemotaxis protein PSPTO_3379 154 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870925 Common - hypothetical protein PSPTO_3770 14 COG3802 GguC, Uncharacterized protein conserved in bacteria Function unknown 28867631 Common - iron-sulfur cluster-binding protein, Rieske family PSPTO_0401 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 28870228 Common - hypothetical protein PSPTO_3053 6 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 28871281 Common - hypothetical protein PSPTO_4139 23 COG3608 COG3608, Predicted deacylase General function prediction only 28871392 Common - ISPsy5, Orf1 PSPTO_4252 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 162533088 Pathogen - hypothetical protein PSPTO_5459 2 None None None 28868503 Common - glucose ABC transporter, permease protein, putative PSPTO_1293 140 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 28870912 Common - hypothetical protein PSPTO_3757 77 COG2902 COG2902, NAD-specific glutamate dehydrogenase Amino acid transport and metabolism 28869792 Common - yersiniabactin non-ribosomal peptide synthetase PSPTO_2602 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28870502 Common - hypothetical protein PSPTO_3338 43 COG1553 DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction Inorganic ion transport and metabolism 28868652 Common - peptidase, M23/M37 family PSPTO_1445 192 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 28871735 Common - site-specific recombinase, phage integrase family PSPTO_4603 18 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28868937 Common fumC-1 fumarate hydratase PSPTO_1731 217 COG0114 FumC, Fumarase Energy production and conversion 28869761 Common - peptidase, M20/M25/M40 family PSPTO_2570 131 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28872265 Common hisI phosphoribosyl-AMP cyclohydrolase PSPTO_5153 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 28868232 Common - tonB domain protein PSPTO_1013 3 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28868348 Common - amino acid ABC transporter, permease protein PSPTO_1133 171 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28869803 Common - hypothetical protein PSPTO_2613 4 None None None 28867383 Common - hypothetical protein PSPTO_0143 23 COG3529 COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain General function prediction only 28871594 Common sodA superoxide dismutase, Mn PSPTO_4459 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 28868484 Common - hypothetical protein PSPTO_1273 96 COG0795 COG0795, Predicted permeases General function prediction only 28870335 Common phbA-2 acetyl-CoA acetyltransferase PSPTO_3164 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 28872056 Common hfq RNA-binding protein Hfq PSPTO_4942 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 28872469 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_5358 174 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28868783 Common - hypothetical protein PSPTO_1577 4 None None None 28870661 Common - iolC protein PSPTO_3500 169 COG3892 COG3892, Uncharacterized protein conserved in bacteria Function unknown 28872443 Pathogen - hypothetical protein PSPTO_5331 4 None None None 28872514 Common fdhD formate dehydrogenase accessory protein FdhD PSPTO_5406 135 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 28868523 Common - pili assembly chaperone PSPTO_1313 25 COG3121 FimC, P pilus assembly protein, chaperone PapD Cell motility and secretion / Intracellular trafficking and secretion 28872559 Common - oxidoreductase, aldo/keto reductase family PSPTO_5453 204 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28868239 Pathogen hopAM1-1 type III effector HopAM1-1 PSPTO_1022 1 None None None 28870182 Common xylG D-xylose ABC transporter, ATP-binding protein PSPTO_3004 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 28872545 Common - hypothetical protein PSPTO_5437 4 None None None 28872501 Common - hypothetical protein PSPTO_5393 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 28871265 Common - purine nucleoside permease, putative PSPTO_4123 11 COG5042 NUP, Purine nucleoside permease Nucleotide transport and metabolism 28872012 Common cbpA curved-DNA-binding protein PSPTO_4897 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 28871197 Pathogen - hypothetical protein PSPTO_4054 1 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 28869587 Common - hypothetical protein PSPTO_2390 6 None None None 28869886 Pathogen - hypothetical protein PSPTO_2698 1 None None None 28869615 Common - transcription antitermination protein, putative PSPTO_2420 41 COG3707 AmiR, Response regulator with putative antiterminator output domain Signal transduction mechanisms 28870537 Common nuoJ NADH dehydrogenase subunit J PSPTO_3373 73 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 28868534 Common cyoB cytochrome o ubiquinol oxidase, subunit I PSPTO_1326 165 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 28869197 Common hemN coproporphyrinogen III oxidase PSPTO_1993 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 28872230 Common - N-acyl-D-amino acid deacylase family protein PSPTO_5117 65 COG3653 COG3653, N-acyl-D-aspartate/D-glutamate deacylase Secondary metabolites biosynthesis, transport, and catabolism 28870728 Pathogen - hypothetical protein PSPTO_3568 1 None None None 28868084 Common - hypothetical protein PSPTO_0863 20 None None None 28870743 Common - ankyrin domain protein PSPTO_3583 91 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 28869605 Common ureG-1 urease accessory protein UreG PSPTO_2409 157 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 28868385 Common - glutathione peroxidase family protein PSPTO_1172 115 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 28872169 Common - hypothetical protein PSPTO_5055 6 COG4782 COG4782, Uncharacterized protein conserved in bacteria Function unknown 28872550 Common - ISPsy5, Orf1 PSPTO_5444 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871277 Common - ATP-dependent DNA ligase PSPTO_4135 96 COG1793 CDC9, ATP-dependent DNA ligase DNA replication, recombination, and repair 28867460 Common - hypothetical protein PSPTO_0228 17 COG3313 COG3313, Predicted Fe-S protein General function prediction only 28871168 Common - transcriptional regulator, LysR family PSPTO_4025 186 COG0583 LysR, Transcriptional regulator Transcription 28868906 Common purM phosphoribosylaminoimidazole synthetase PSPTO_1700 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 28870994 Common - ribonuclease, Rne/Rng family protein PSPTO_3841 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 28872623 Common - hypothetical protein PSPTO_5518 6 None None None 28871471 Common - hypothetical protein PSPTO_4334 111 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 28867471 Common pckA phosphoenolpyruvate carboxykinase PSPTO_0239 98 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 28871432 Common - DnaJ domain protein PSPTO_4295 12 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 28871557 Common - lipoprotein, putative PSPTO_4422 69 COG2823 OsmY, Predicted periplasmic or secreted lipoprotein General function prediction only 28872597 Common - hypothetical protein PSPTO_5492 58 COG2261 COG2261, Predicted membrane protein Function unknown 28867476 Common - hypothetical protein PSPTO_0244 9 COG3450 COG3450, Predicted enzyme of the cupin superfamily General function prediction only 28870492 Common tliF ABC transporter, permease protein PSPTO_3328 129 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28870385 Common - hypothetical protein PSPTO_3219 1 None None None 28870127 Common - 3-alpha-hydroxysteroid dehydrogenase PSPTO_2949 215 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868738 Common glnD PII uridylyl-transferase PSPTO_1532 124 COG2844 GlnD, UTP:GlnB (protein PII) uridylyltransferase Posttranslational modification, protein turnover, chaperones 28868907 Common - hypothetical protein PSPTO_1701 21 COG3249 COG3249, Uncharacterized protein conserved in bacteria Function unknown 28871924 Common - hypothetical protein PSPTO_4809 51 COG1434 COG1434, Uncharacterized conserved protein Function unknown 28872170 Common ilvD dihydroxy-acid dehydratase PSPTO_5057 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 28867296 Common - ISPsy4, transposase PSPTO_0055 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871473 Common - lipoprotein, putative PSPTO_4336 1 None None None 28869645 Common soxA-2 sarcosine oxidase, alpha subunit PSPTO_2450 182 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 28872483 Common - hypothetical protein PSPTO_5375 29 COG3636 COG3636, Predicted transcriptional regulator Transcription 28871654 Common - methyltransferase domain protein PSPTO_4520 54 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 28868157 Common - hypothetical protein PSPTO_0937 24 None None None 28869877 Common - transcriptional regulator, LysR family PSPTO_2689 169 COG0583 LysR, Transcriptional regulator Transcription 28871378 Common ung uracil-DNA glycosylase PSPTO_4236 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 28870939 Common - potassium channel protein, putative PSPTO_3784 58 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 28871871 Common - hypothetical protein PSPTO_4755 4 None None None 28869627 Common - ISPssy, transposase PSPTO_2432 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872346 Pathogen - hypothetical protein PSPTO_5234 1 None None None 28872590 Common - phosphate ABC transporter, permease protein, putative PSPTO_5485 220 COG4985 COG4985, ABC-type phosphate transport system, auxiliary component Inorganic ion transport and metabolism 28868292 Common rfbC-1 dTDP-4-dehydrorhamnose 3,5-epimerase PSPTO_1077 167 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 28869745 Common - hypothetical protein PSPTO_2554 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 28871147 Common - hypothetical protein PSPTO_4004 6 None None None 28871456 Common - hypothetical protein PSPTO_4319 4 None None None 28872086 Common - hypothetical protein PSPTO_4972 27 COG3151 COG3151, Uncharacterized protein conserved in bacteria Function unknown 28871741 Pathogen - hypothetical protein PSPTO_4609 1 None None None 28870639 Common - hypothetical protein PSPTO_3478 23 None None None 28871190 Pathogen - hypothetical protein PSPTO_4047 1 None None None 28869370 Common - ISPsy7, transposase PSPTO_2167 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872223 Common - 3-oxoacyl-(acyl carrier protein) synthase II PSPTO_5110 209 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28870025 Common - ISPsy14, transposase PSPTO_2841 68 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869155 Common fliD flagellar hook-associated protein FliD PSPTO_1951 77 COG1345 FliD, Flagellar capping protein Cell motility and secretion 28871935 Common - hypothetical protein PSPTO_4820 17 COG2921 COG2921, Uncharacterized conserved protein Function unknown 28871575 Pathogen - hypothetical protein PSPTO_4440 1 None None None 28872047 Common rpsF 30S ribosomal protein S6 PSPTO_4933 195 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 28868098 Common - hypothetical protein PSPTO_0878 5 None None None 28872078 Common - hypothetical protein PSPTO_4964 47 COG3150 COG3150, Predicted esterase General function prediction only 28871628 Common tpiA triosephosphate isomerase PSPTO_4494 218 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 28870274 Common - outer membrane efflux protein PSPTO_3101 115 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28872159 Common - twitching motility protein PSPTO_5045 217 COG2805 PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT Cell motility and secretion / Intracellular trafficking and secretion 28869378 Common leuB 3-isopropylmalate dehydrogenase PSPTO_2175 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 28870947 Common - serine/threonine protein phosphatase PSPTO_3792 35 None None None 28872366 Common - radical SAM domain protein PSPTO_5254 106 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 28871199 Pathogen - hypothetical protein PSPTO_4056 1 None None None 28871848 Common - IS52, transposase PSPTO_4725 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869837 Common - hypothetical protein PSPTO_2648 1 None None None 28871088 Pathogen - hypothetical protein PSPTO_3938 1 None None None 28867542 Common cysA sulfate ABC transporter, ATP-binding protein CysA PSPTO_0311 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 28868224 Common gmd GDP-mannose 4,6-dehydratase PSPTO_1005 218 COG1089 Gmd, GDP-D-mannose dehydratase Cell envelope biogenesis, outer membrane 28870711 Common fahA fumarylacetoacetase PSPTO_3550 51 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 28869351 Common - pyoverdine sidechain peptide synthetase II, D-Asp-L-Thr component PSPTO_2148 221 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28868671 Common - mutT/nudix family protein PSPTO_1464 131 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 28867493 Common - transcriptional regulator, AsnC family PSPTO_0261 145 COG1522 Lrp, Transcriptional regulators Transcription 28869041 Common astB succinylarginine dihydrolase PSPTO_1836 34 COG3724 AstB, Succinylarginine dihydrolase Amino acid transport and metabolism 28870416 Common - dipeptide ABC transporter, ATP-binding protein PSPTO_3251 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869304 Common - hypothetical protein PSPTO_2100 2 None None None 28869840 Common - response regulator PSPTO_2651 16 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28869932 Common - acyl-CoA dehydrogenase family protein PSPTO_2745 147 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28872691 Common - ISPsy5, Orf1 PSPTO_5590 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869928 Common - transposase/IS protein PSPTO_2741 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28870254 Common - hypothetical protein PSPTO_3079 77 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28870613 Common - transporter, LysE family PSPTO_3452 110 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28870499 Common - ABC transporter, periplasmic substrate-binding protein, putative PSPTO_3335 34 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 28872152 Common - Holliday junction resolvase-like protein PSPTO_5038 179 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 28867487 Common - oxidoreductase, FAD-binding PSPTO_0255 97 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28867330 Common rpmG 50S ribosomal protein L33 PSPTO_0090 136 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 28868318 Common - 50S ribosomal protein L25/general stress protein Ctc PSPTO_1103 184 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 28870578 Pathogen - hypothetical protein PSPTO_3414 1 None None None 28868740 Common rpsB 30S ribosomal protein S2 PSPTO_1534 229 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 28868844 Common - ABC transporter, ATP-binding protein PSPTO_1638 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 28872237 Pathogen - hypothetical protein PSPTO_5124 1 None None None 28868631 Common iscU scaffold protein PSPTO_1424 148 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 28872388 Common - proline-specific permease proY PSPTO_5276 164 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 28871439 Common - transcriptional regulator, TetR family PSPTO_4302 115 COG1309 AcrR, Transcriptional regulator Transcription 28872064 Common orn oligoribonuclease PSPTO_4950 88 COG1949 Orn, Oligoribonuclease (3'->5' exoribonuclease) RNA processing and modification 28869248 Common - transporter, putative PSPTO_2044 80 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28867933 Common - O-antigen ABC transporter, ATP-binding protein PSPTO_0705 249 COG1134 TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 28867252 Common - ISPsy3, transposase PSPTO_0009 31 None None None 28870637 Common - putative monovalent cation/H+ antiporter subunit G PSPTO_3476 40 COG1320 MnhG, Multisubunit Na+/H+ antiporter, MnhG subunit Inorganic ion transport and metabolism 28867339 Common - hypothetical protein PSPTO_0099 9 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 28871228 Pathogen - hypothetical protein PSPTO_4085 1 None None None 28870088 Common - transcriptional regulator, LysR family PSPTO_2909 190 COG0583 LysR, Transcriptional regulator Transcription 28871841 Pathogen - hypothetical protein PSPTO_4717 1 None None None 28867823 Common - hypothetical protein PSPTO_0595 17 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 28867268 Pathogen - hypothetical protein PSPTO_0026 1 None None None 28870652 Pathogen - hypothetical protein PSPTO_3491 1 None None None 28867896 Common - hypothetical protein PSPTO_0668 3 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 28872375 Common katE hydroperoxidase II PSPTO_5263 125 COG0753 KatE, Catalase Inorganic ion transport and metabolism 28870263 Common - nickel ABC transporter, periplasmic nickel-binding protein, putative PSPTO_3088 184 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28868107 Common - sugar ABC transporter, permease protein PSPTO_0887 194 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 28867583 Common ntrB nitrogen regulation protein NtrB PSPTO_0353 220 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 28868732 Common sufE sufE protein PSPTO_1526 98 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 28867665 Common trmB tRNA (guanine-N(7))-methyltransferase PSPTO_0435 176 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 28872184 Common - hypothetical protein PSPTO_5071 117 COG2353 COG2353, Uncharacterized conserved protein Function unknown 28868605 Pathogen hrcQa type III secretion protein HrcQa PSPTO_1397 2 None None None 28867575 Common polI DNA polymerase I PSPTO_0344 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 28868025 Common rplU 50S ribosomal protein L21 PSPTO_0797 162 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 28867250 Common - hypothetical protein PSPTO_0007 4 None None None 28868459 Common moaD molybdenum cofactor biosynthesis protein D PSPTO_1248 62 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 28871541 Common ddl D-alanine--D-alanine ligase PSPTO_4406 215 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 28871983 Common - sensor histidine kinase/response regulator RetS PSPTO_4868 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869325 Pathogen - hypothetical protein PSPTO_2122 1 None None None 28872257 Common phaC poly(3-hydroxyalkanoate) polymerase PSPTO_5145 74 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 28869750 Common phnG phosphonate metabolism protein PhnG PSPTO_2559 31 COG3624 PhnG, Uncharacterized enzyme of phosphonate metabolism Inorganic ion transport and metabolism 28871481 Common - hypothetical protein PSPTO_4345 2 COG3157 Hcp, Hemolysin-coregulated protein (uncharacterized) Function unknown 28871099 Common - lipoprotein, putative PSPTO_3952 30 COG3317 NlpB, Uncharacterized lipoprotein Cell envelope biogenesis, outer membrane 28867328 Pathogen - hypothetical protein PSPTO_0088 1 None None None 28871995 Common - cobalt-precorrin-6x reductase PSPTO_4880 76 COG2099 CobK, Precorrin-6x reductase Coenzyme metabolism 28870481 Common gspE general secretion pathway protein E PSPTO_3317 213 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 28869962 Common - amino acid ABC transporter, permease protein PSPTO_2776 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28870815 Common - xanthine dehydrogenase, N-terminal subunit PSPTO_3660 122 COG4630 XdhA, Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A Nucleotide transport and metabolism 28867402 Common - 3-oxoadipate enol-lactone hydrolase family protein PSPTO_0162 113 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28867639 Common - TldD/PmbA family protein PSPTO_0409 166 COG0312 TldD, Predicted Zn-dependent proteases and their inactivated homologs General function prediction only 28872459 Pathogen - hypothetical protein PSPTO_5347 1 None None None 28869683 Common - ABC transporter, ATP-binding/permease protein PSPTO_2490 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28867940 Pathogen - hypothetical protein PSPTO_0712 1 None None None 28868514 Common - hypothetical protein PSPTO_1304 20 None None None 28869894 Common - mannitol ABC transporter, periplasmic mannitol-binding protein PSPTO_2707 103 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28871529 Common panE-2 2-dehydropantoate 2-reductase PSPTO_4394 99 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 28868430 Common - outer membrane efflux protein PSPTO_1217 107 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28870150 Common - oxidoreductase, 2-nitropropane dioxygenase family PSPTO_2972 139 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 28871674 Common - proline iminopeptidase, putative PSPTO_4540 70 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28872304 Common - efflux transporter, RND family, MFP subunit PSPTO_5192 156 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28871978 Common - hypothetical protein PSPTO_4863 20 None None None 28871366 Common algU RNA polymerase sigma factor AlgU PSPTO_4224 174 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 28871494 Common - oxidoreductase, FAD/FMN-binding PSPTO_4358 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28871768 Common - cobalamin synthesis protein/P47K family protein PSPTO_4636 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 28867985 Common add adenosine deaminase PSPTO_0757 100 COG1816 Add, Adenosine deaminase Nucleotide transport and metabolism 28868100 Common - hypothetical protein PSPTO_0880 21 None None None 28871336 Common - hypothetical protein PSPTO_4194 17 None None None 28868257 Common - sensory box protein PSPTO_1040 20 None None None 28870457 Pathogen hopAH2-2 type III effector HopAH2-2 PSPTO_3293 1 None None None 28870803 Common - hypothetical protein PSPTO_3647 6 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28867446 Common - virulence-associated protein, putative PSPTO_0214 82 COG3093 VapI, Plasmid maintenance system antidote protein General function prediction only 28871814 Pathogen cfa4 coronafacic acid synthetase component PSPTO_4684 2 None None None 28872326 Common - ISPsy5, Orf1 PSPTO_5214 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867773 Common - hypothetical protein PSPTO_0545 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 28869312 Common lolC lipoprotein releasing system transmembrane protein LolC PSPTO_2109 156 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 28872407 Common - hypothetical protein PSPTO_5295 18 None None None 28870309 Common acpD azoreductase PSPTO_3136 98 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 28870251 Common - transcriptional regulator, TetR family PSPTO_3076 105 COG1309 AcrR, Transcriptional regulator Transcription 28872672 Common - hypothetical protein PSPTO_5567 27 COG4705 COG4705, Uncharacterized membrane-anchored protein conserved in bacteria Function unknown 28867872 Common rpmD 50S ribosomal protein L30 PSPTO_0644 92 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 28871954 Common - hypothetical protein PSPTO_4839 22 COG5345 COG5345, Uncharacterized protein conserved in bacteria Function unknown 28869022 Common - aromatic amino acid permease PSPTO_1817 167 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 28868542 Common - methyl-accepting chemotaxis protein PSPTO_1334 135 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871123 Common ruvA Holliday junction DNA helicase motor protein PSPTO_3978 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 28869234 Common - muramoyltetrapeptide carboxypeptidase, putative PSPTO_2030 84 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 28870157 Common - hypothetical protein PSPTO_2979 2 COG3607 COG3607, Predicted lactoylglutathione lyase General function prediction only 28869210 Pathogen - hypothetical protein PSPTO_2006 1 None None None 28871911 Common - sensor histidine kinase PSPTO_4796 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870405 Common tolQ-1 tolQ protein PSPTO_3240 149 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28869969 Common - UvrD/REP helicase family protein PSPTO_2783 183 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 28867948 Common - hypothetical protein PSPTO_0720 43 COG2944 COG2944, Predicted transcriptional regulator Transcription 28868032 Common - membrane protein, MviN family PSPTO_0804 197 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 28871256 Common - hypothetical protein PSPTO_4114 81 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 28867651 Common - hydrolase, alpha/beta fold family PSPTO_0421 71 COG0429 COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold General function prediction only 28868185 Common - sensor histidine kinase PSPTO_0965 224 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 28870513 Common ftsK cell division protein FtsK PSPTO_3349 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 28867361 Common - hypothetical protein PSPTO_0121 39 COG2715 SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. General function prediction only 28868113 Common - outer membrane protein P1, putative PSPTO_0893 80 COG2067 FadL, Long-chain fatty acid transport protein Lipid metabolism 28867510 Common - hypothetical protein PSPTO_0278 48 COG3152 COG3152, Predicted membrane protein Function unknown 28870969 Common folC folylpolyglutamate synthase/dihydrofolate synthase PSPTO_3814 216 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 28871270 Common - TonB-dependent siderophore receptor PSPTO_4128 102 COG4774 Fiu, Outer membrane receptor for monomeric catechols Inorganic ion transport and metabolism 28869972 Common - ABC transporter, ATP-binding protein PSPTO_2786 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 28867519 Pathogen - excisionase, putative PSPTO_0288 1 None None None 28871058 Common - hypothetical protein PSPTO_3906 59 COG3825 COG3825, Uncharacterized protein conserved in bacteria Function unknown 28867323 Common algC phosphomannomutase AlgC PSPTO_0083 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 28871028 Common - putative aminopeptidase 2 PSPTO_3876 44 COG1362 LAP4, Aspartyl aminopeptidase Amino acid transport and metabolism 28867960 Common - hypothetical protein PSPTO_0732 52 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28871512 Common groEL chaperonin GroEL PSPTO_4376 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 28872177 Common - hydroxypyruvate isomerase, putative PSPTO_5064 81 COG3622 Hfi, Hydroxypyruvate isomerase Carbohydrate transport and metabolism 28868128 Common cheB-1 chemotaxis-specific methylesterase PSPTO_0908 204 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 28870372 Pathogen - hypothetical protein PSPTO_3203 2 None None None 28870317 Common - sigma-54 dependent transcriptional regulator PSPTO_3144 172 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28872081 Pathogen - hypothetical protein PSPTO_4967 2 None None None 28869417 Common sixA phosphohistidine phosphatase SixA PSPTO_2215 67 COG2062 SixA, Phosphohistidine phosphatase SixA Signal transduction mechanisms 28869694 Pathogen - hypothetical protein PSPTO_2501 1 None None None 28870587 Common - hypothetical protein PSPTO_3423 1 COG3645 COG3645, Uncharacterized phage-encoded protein Function unknown 28869089 Common - efflux protein, LysE family PSPTO_1885 115 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28869104 Pathogen - hypothetical protein PSPTO_1900 1 None None None 28870484 Common - hypothetical protein PSPTO_3320 16 None None None 28871590 Common ptsN PTS IIA-like nitrogen-regulatory protein PtsN PSPTO_4455 136 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 28872397 Common - dinucleoside polyphosphate hydrolase PSPTO_5285 112 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 28872019 Common - ISPsy11, transposase OrfA PSPTO_4905 9 None None None 28868894 Common - thioredoxin, putative PSPTO_1688 141 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 28867352 Common xpt xanthine phosphoribosyltransferase PSPTO_0112 112 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 28867843 Common rplK 50S ribosomal protein L11 PSPTO_0615 247 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 28870630 Common - DNA-binding protein PSPTO_3469 85 COG1476 COG1476, Predicted transcriptional regulators Transcription 28867257 Pathogen - hypothetical protein PSPTO_0015 1 None None None 28871645 Common - ISPsy11, transposase OrfB PSPTO_4511 137 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872599 Common purE phosphoribosylaminoimidazole carboxylase catalytic subunit PSPTO_5494 231 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 28867247 Common gyrB DNA gyrase subunit B PSPTO_0004 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 28870953 Common arsB arsenical pump membrane protein PSPTO_3798 112 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 28868750 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase PSPTO_1544 157 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 28871241 Pathogen - hypothetical protein PSPTO_4099 1 None None None 28872331 Common - MFS transporter, phthalate permease family PSPTO_5219 158 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28870081 Common - glutamine amidotransferase, putative PSPTO_2902 112 COG2071 COG2071, Predicted glutamine amidotransferases General function prediction only 28868842 Common - hypothetical protein PSPTO_1636 50 COG5621 COG5621, Predicted secreted hydrolase General function prediction only 28868392 Common hopJ1 type III effector HopJ1 PSPTO_1179 15 None None None 28868192 Common - iron-sulfur cluster-binding protein, Rieske family PSPTO_0972 39 COG2146 {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases Inorganic ion transport and metabolism / General function prediction only 28867879 Common rpoA DNA-directed RNA polymerase subunit alpha PSPTO_0651 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 28872323 Common - hypothetical protein PSPTO_5211 17 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 28869827 Common abP L-arabinose ABC transporter, periplasmic L-arabinose-binding protein PSPTO_2638 30 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28871839 Common cmaU cmaU protein PSPTO_4714 7 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28869950 Common - hypothetical protein PSPTO_2764 56 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28870837 Common - hypothetical protein PSPTO_3682 27 COG3268 COG3268, Uncharacterized conserved protein Function unknown 28870175 Common - methyl-accepting chemotaxis protein PSPTO_2997 142 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871383 Common - hypothetical protein PSPTO_4241 47 COG3665 COG3665, Uncharacterized conserved protein Function unknown 28871430 Common - sensory box histidine kinase/response regulator PSPTO_4293 218 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28868009 Common - transcriptional regulator, LysR family PSPTO_0781 153 COG0583 LysR, Transcriptional regulator Transcription 28869741 Pathogen - hypothetical protein PSPTO_2550 1 None None None 28872160 Common - hypothetical protein PSPTO_5046 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 28870962 Common - lipoprotein, putative PSPTO_3807 13 COG5373 COG5373, Predicted membrane protein Function unknown 28869926 Common - acyl-CoA dehydrogenase, putative PSPTO_2739 171 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28870187 Common - amino acid ABC transporter, ATP-binding protein PSPTO_3009 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28868143 Common coaE dephospho-CoA kinase PSPTO_0923 205 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 28872023 Common ureE urease accessory protein UreE PSPTO_4909 61 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 28871901 Pathogen - hypothetical protein PSPTO_4785 1 None None None 28872612 Common - acetyltransferase, GNAT family PSPTO_5507 79 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 28869906 Common - enoyl-CoA hydratase PSPTO_2719 180 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 28867420 Common trkA potassium transporter peripheral membrane component PSPTO_0180 140 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 28871633 Common - hypothetical protein PSPTO_4499 90 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 28868625 Common - ISPsy6, transposase PSPTO_1418 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868674 Common - hypothetical protein PSPTO_1467 9 None None None 28868618 Common - hypothetical protein PSPTO_1411 2 None None None 28870971 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase PSPTO_3816 191 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 28867526 Pathogen - hypothetical protein PSPTO_0295 1 None None None 28871761 Pathogen - hypothetical protein PSPTO_4629 1 None None None 28870449 Common gudD glucarate dehydratase PSPTO_3285 56 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 28870230 Pathogen - hypothetical protein PSPTO_3055 1 None None None 28871317 Common - sensor histidine kinase PSPTO_4175 189 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28867784 Common - nucleotidyltransferase family protein PSPTO_0556 175 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 28869980 Common - hypothetical protein PSPTO_2794 72 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 28870562 Common - tail fiber protein H, putative PSPTO_3398 28 COG5301 COG5301, Phage-related tail fibre protein General function prediction only 28868936 Common - NAD(P)H dehydrogenase, quinone family PSPTO_1730 72 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 28869216 Pathogen - hypothetical protein PSPTO_2012 1 None None None 28872669 Common - ISPssy, transposase PSPTO_5564 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28868948 Common ubiG 3-demethylubiquinone-9 3-methyltransferase PSPTO_1742 185 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 28867417 Common def peptide deformylase PSPTO_0177 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 28867613 Common metK S-adenosylmethionine synthetase PSPTO_0383 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 28869162 Common fliF flagellar MS-ring protein PSPTO_1958 127 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 28870530 Common nuoB NADH dehydrogenase subunit B PSPTO_3366 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 28872293 Common - cystine ABC tranporter, permease protein, putative PSPTO_5181 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28867271 Common - transposition helper protein PSPTO_0029 13 None None None 28871925 Common - hypothetical protein PSPTO_4810 1 None None None 28871685 Common - ABC transporter, ATP-binding protein PSPTO_4551 221 COG4178 COG4178, ABC-type uncharacterized transport system, permease and ATPase components General function prediction only 28869708 Common - lipoprotein, putative PSPTO_2515 36 None None None 28870357 Common - choline/ethanolamine kinase PSPTO_3188 16 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 28868179 Common pgi glucose-6-phosphate isomerase PSPTO_0959 180 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 28871776 Common - transcriptional regulator, LuxR family PSPTO_4644 74 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28871427 Common bglX beta-glucosidase PSPTO_4290 131 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 28870676 Common - hypothetical protein PSPTO_3515 36 COG4728 COG4728, Uncharacterized protein conserved in bacteria Function unknown 28872214 Common - hypothetical protein PSPTO_5101 26 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 28871067 Common - copper resistance protein B PSPTO_3915 43 COG3667 PcoB, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 28867709 Common - hypothetical protein PSPTO_0479 19 COG4104 COG4104, Uncharacterized conserved protein Function unknown 28867749 Common - hypothetical protein PSPTO_0520 18 COG1289 COG1289, Predicted membrane protein Function unknown 28868170 Common ampD N-acetyl-anhydromuranmyl-L-alanine amidase PSPTO_0950 108 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 28868187 Common - glutamyl-Q tRNA(Asp) synthetase PSPTO_0967 248 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 28868826 Common - hypothetical protein PSPTO_1620 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 28870699 Common - bacterial transferase, hexapeptide repeat protein PSPTO_3538 98 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 28870286 Common galU UTP-glucose-1-phosphate uridylyltransferase PSPTO_3113 231 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 28872255 Common - hypothetical protein PSPTO_5142 49 COG3536 COG3536, Uncharacterized protein conserved in bacteria Function unknown 28868046 Common - transcriptional regulator, MarR family PSPTO_0818 117 COG1846 MarR, Transcriptional regulators Transcription 28871883 Common - pentapeptide repeat protein PSPTO_4767 3 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 28867981 Common - drug resistance transporter, Bcr/CflA family protein PSPTO_0753 218 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869403 Common lpdA dihydrolipoamide dehydrogenase PSPTO_2201 245 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 28868490 Common - transcriptional regulator TyrR, putative PSPTO_1280 171 COG3283 TyrR, Transcriptional regulator of aromatic amino acids metabolism Transcription / Amino acid transport and metabolism 28868658 Common - hypothetical protein PSPTO_1451 38 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 28870319 Common - ISPsy7, transposase PSPTO_3146 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868161 Common terA tellurium resistance protein TerA PSPTO_0941 25 COG4110 COG4110, Uncharacterized protein involved in stress response General function prediction only 28868495 Common - regulatory protein, putative PSPTO_1285 46 COG3712 FecR, Fe2+-dicitrate sensor, membrane component Inorganic ion transport and metabolism / Signal transduction mechanisms 28871640 Common grpE heat shock protein GrpE PSPTO_4506 229 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 28870410 Common - DNA-binding response regulator PSPTO_3245 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28869390 Common - lipoprotein, putative PSPTO_2188 4 None None None 28872603 Common - transcriptional regulator, LysR family PSPTO_5498 173 COG0583 LysR, Transcriptional regulator Transcription 28870521 Common - mutT/nudix family protein PSPTO_3357 52 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 28872334 Common ubiH 2-octaprenyl-6-methoxyphenyl hydroxylase PSPTO_5222 121 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 28870311 Common - 3-oxoadipate enol-lactone hydrolase PSPTO_3138 167 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28869007 Common trkH potassium uptake protein TrkH PSPTO_1801 150 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 28870261 Common - transcriptional regulator, putative PSPTO_3086 111 COG1396 HipB, Predicted transcriptional regulators Transcription 28871001 Common - DNA internalization-related competence protein ComEC/Rec2 PSPTO_3848 155 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 28868007 Common - hypothetical protein PSPTO_0779 4 None None None 28867451 Common - hypothetical protein PSPTO_0219 126 COG0432 COG0432, Uncharacterized conserved protein Function unknown 28867413 Common qor quinone oxidoreductase PSPTO_0173 182 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28872144 Common - sensor histidine kinase/response regulator PSPTO_5030 225 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 28867452 Common - hypothetical protein PSPTO_0220 3 None None None 28868355 Common - hypothetical protein PSPTO_1140 17 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 28868801 Pathogen - hypothetical protein PSPTO_1595 1 None None None 28869864 Common fdhA-2 glutathione-independent formaldehyde dehydrogenase PSPTO_2676 208 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 28867831 Common - hypothetical protein PSPTO_0603 97 COG1981 COG1981, Predicted membrane protein Function unknown 28871446 Common catI 3-oxoadipate:succinyl-CoA transferase, subunit A PSPTO_4309 47 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 28868968 Common - hypothetical protein PSPTO_1762 14 None None None 28872645 Common - acyltransferase, putative PSPTO_5540 83 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28869728 Common - hypothetical protein PSPTO_2535 5 None None None 28869564 Common rbsB-1 ribose ABC transporter, periplasmic ribose-binding protein PSPTO_2367 117 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28870058 Common - ABC transporter, permease protein, putative PSPTO_2876 8 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 28870237 Common - iron-sulfur cluster-binding protein, rieske family PSPTO_3062 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 28867620 Common fba fructose-1,6-bisphosphate aldolase PSPTO_0390 164 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 28869106 Common bphP bacteriophytochrome histidine kinase PSPTO_1902 223 COG4251 COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) Signal transduction mechanisms 28867480 Common - oxidoreductase, FAD-binding PSPTO_0248 104 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28871492 Common - transcriptional regulator, ArsR family PSPTO_4356 54 COG0640 ArsR, Predicted transcriptional regulators Transcription 28870381 Common - ISPsy5, Orf1 PSPTO_3215 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870238 Common - dihydrodipicolinate synthase, putative PSPTO_3063 234 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 28867993 Common atzB hydroxydechloroatrazine ethylaminohydrolase PSPTO_0765 172 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 28868072 Common - hypothetical protein PSPTO_0851 15 COG3477 COG3477, Predicted periplasmic/secreted protein Function unknown 28869599 Common - glycerol kinase, putative PSPTO_2403 178 COG0554 GlpK, Glycerol kinase Energy production and conversion 28868209 Common - hypothetical protein PSPTO_0989 6 None None None 28868688 Common thrC threonine synthase PSPTO_1481 136 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 28871903 Common - sensor histidine kinase PSPTO_4787 187 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28868993 Common - transcriptional regulator, LysR family PSPTO_1787 177 COG0583 LysR, Transcriptional regulator Transcription 28870908 Common - methyl-accepting chemotaxis protein PSPTO_3753 135 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870203 Common aroF-2 phospho-2-dehydro-3-deoxyheptonate aldolase PSPTO_3027 107 COG0722 AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 28870475 Common - general secretion pathway protein K, putative PSPTO_3311 10 COG3156 PulK, Type II secretory pathway, component PulK Intracellular trafficking and secretion 28868426 Common - transcriptional regulator, AraC family PSPTO_1213 150 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 28870684 Common - MOSC domain protein PSPTO_3523 72 COG3217 COG3217, Uncharacterized Fe-S protein General function prediction only 28871101 Common - hypothetical protein PSPTO_3954 25 COG2716 GcvR, Glycine cleavage system regulatory protein Amino acid transport and metabolism 28870207 Common - peptide ABC transporter, permease protein PSPTO_3031 220 COG4239 COG4239, ABC-type uncharacterized transport system, permease component General function prediction only 28867786 Common - hypothetical protein PSPTO_0558 4 None None None 28867974 Common - hypothetical protein PSPTO_0746 1 None None None 28868263 Common - virulence-associated protein, putative PSPTO_1046 26 COG4456 VagC, Virulence-associated protein and related proteins Function unknown 28872006 Common ureA urease subunit gamma PSPTO_4891 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 28868000 Common - xanthine/uracil permease family protein PSPTO_0772 129 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 28868202 Common ilvH acetolactate synthase 3 regulatory subunit PSPTO_0982 192 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 28870654 Common - iolH protein PSPTO_3493 22 COG1082 IolE, Sugar phosphate isomerases/epimerases Carbohydrate transport and metabolism 28872356 Common - transcriptional regulator, GntR family PSPTO_5244 86 COG2186 FadR, Transcriptional regulators Transcription 28867491 Common gabT-1 4-aminobutyrate aminotransferase PSPTO_0259 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 28872450 Common hisB imidazoleglycerol-phosphate dehydratase PSPTO_5338 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 28867245 Common dnaN DNA polymerase III subunit beta PSPTO_0002 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 28869845 Common - xanthine dehydrogenase accessory factor XdhC, putative PSPTO_2657 112 COG1975 XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Posttranslational modification, protein turnover, chaperones 28871307 Common - ABC transporter, ATP-binding protein PSPTO_4165 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28872247 Common - malic enzyme family protein PSPTO_5134 202 COG0281 SfcA, Malic enzyme Energy production and conversion 28871012 Common - hypothetical protein PSPTO_3859 147 COG1741 COG1741, Pirin-related protein General function prediction only 28868852 Common - LysM domain protein PSPTO_1646 32 COG3170 FimV, Tfp pilus assembly protein FimV Cell motility and secretion / Intracellular trafficking and secretion 28871851 Common - ISPsy4, transposase PSPTO_4730 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872062 Common - iron-sulfur cluster-binding protein PSPTO_4948 136 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 28870425 Pathogen - hypothetical protein PSPTO_3261 1 None None None 28870707 Pathogen - hypothetical protein PSPTO_3546 1 None None None 28870761 Common - hypothetical protein PSPTO_3601 40 COG4117 COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Energy production and conversion 28869348 Common - iron-regulated membrane protein, putative PSPTO_2145 60 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 28870607 Common - glycosyl transferase, group 1 family protein PSPTO_3446 191 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28868099 Common - hypothetical protein PSPTO_0879 36 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 28869109 Pathogen - hypothetical protein PSPTO_1905 1 None None None 28869580 Common pheT phenylalanyl-tRNA synthetase subunit beta PSPTO_2383 246 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 28872536 Common - ISPssy, transposase PSPTO_5428 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28867496 Common - peptide ABC transporter, ATP-binding protein PSPTO_0264 249 COG4172 COG4172, ABC-type uncharacterized transport system, duplicated ATPase component General function prediction only 28871780 Common cioA cyanide-insensitive terminal oxidase CioA PSPTO_4648 165 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 28867581 Common - oxidoreductase, aldo/keto reductase family PSPTO_0351 193 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 28867742 Common pqqA coenzyme PQQ synthesis protein PqqA PSPTO_0513 1 None None None 28867489 Common gabD-1 succinate-semialdehyde dehydrogenase PSPTO_0257 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28871613 Common pcaC-2 4-carboxymuconolactone decarboxylase PSPTO_4478 89 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 28870306 Common - methyltransferase, putative PSPTO_3133 24 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 28870034 Common - SCO1/SenC family protein PSPTO_2851 100 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 28872273 Common mdoH glucosyltransferase MdoH PSPTO_5161 53 COG2943 MdoH, Membrane glycosyltransferase Cell envelope biogenesis, outer membrane 28867720 Common - Ser/Thr protein phosphatase family protein PSPTO_0490 121 COG1409 Icc, Predicted phosphohydrolases General function prediction only 28869495 Common cmaX cmaX protein PSPTO_2295 56 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 28870821 Common - polysaccharide deacetylase family protein PSPTO_3666 90 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 28872659 Common - methyl-accepting chemotaxis protein PSPTO_5554 141 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870339 Pathogen - hypothetical protein PSPTO_3168 1 None None None 28869145 Common flgH flagellar basal body L-ring protein PSPTO_1941 101 COG2063 FlgH, Flagellar basal body L-ring protein Cell motility and secretion 28867719 Common - ABC transporter, ATP-binding protein PSPTO_0489 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28867889 Common ugpC glycerol-3-phosphate ABC transporter, ATP-binding protein PSPTO_0661 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 28869289 Pathogen - hypothetical protein PSPTO_2085 2 None None None 28872490 Common - acyl carrier protein phosphodiesterase, putative PSPTO_5382 86 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 28868284 Common - hypothetical protein PSPTO_1069 16 COG2246 COG2246, Predicted membrane protein Function unknown 28869273 Pathogen - hypothetical protein PSPTO_2069 1 None None None 28869387 Common etfB-2 electron transfer flavoprotein, beta subunit PSPTO_2185 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 28869755 Common - phosphonate ABC transporter, ATP-binding protein PSPTO_2564 249 COG4778 PhnL, ABC-type phosphonate transport system, ATPase component Inorganic ion transport and metabolism 28868706 Common - response regulator/GGDEF domain protein PSPTO_1499 215 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 28870071 Pathogen - hypothetical protein PSPTO_2892 1 None None None 28871175 Common recX recombination regulator RecX PSPTO_4032 84 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 28867922 Common nusB transcription antitermination protein NusB PSPTO_0694 188 COG0781 NusB, Transcription termination factor Transcription 28870801 Common - hypothetical protein PSPTO_3645 170 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 28868705 Common - chemotaxis-specific methylesterase PSPTO_1498 195 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 28869777 Pathogen - hypothetical protein PSPTO_2587 1 None None None 28869441 Common - YD repeat protein PSPTO_2239 51 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 28869540 Common pcaC-1 4-carboxymuconolactone decarboxylase PSPTO_2342 91 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 28868537 Common cyoE protoheme IX farnesyltransferase PSPTO_1329 167 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 28871536 Common - hypothetical protein PSPTO_4401 13 COG4701 COG4701, Uncharacterized protein conserved in bacteria Function unknown 28870120 Common fcs feruloyl-CoA synthase PSPTO_2941 191 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 28871380 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_4238 64 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28872422 Common - glutamine synthetase PSPTO_5310 225 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 28867753 Common - peptidase, M20/M25/M40 family PSPTO_0524 60 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28869056 Common - hypothetical protein PSPTO_1851 14 None None None 28869657 Common - Mn2+/Fe2+ transporter, NRAMP family PSPTO_2464 45 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 28871398 Common - glutathione-regulated potassium-efflux system ancillary protein KefF PSPTO_4258 71 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 28871891 Common - transcriptional regulator, GntR family/aminotransferase, class I PSPTO_4775 190 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 28870185 Common - amine oxidase, flavin-containing PSPTO_3007 43 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 28869110 Common - major facilitator family transporter PSPTO_1906 112 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28870039 Common - site-specific recombinase, phage integrase family PSPTO_2857 25 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28871861 Common - site-specific recombinase, phage integrase family PSPTO_4744 5 None None None 28872448 Common - hypothetical protein PSPTO_5336 12 COG5460 COG5460, Uncharacterized conserved protein Function unknown 28867594 Common - sugar ABC transporter, periplasmic sugar-binding protein, putative PSPTO_0364 101 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28869342 Common - cation ABC transporter, permease protein PSPTO_2139 195 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 28872240 Common aroK shikimate kinase PSPTO_5127 201 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 28868079 Common - hypothetical protein PSPTO_0858 1 None None None 28868398 Common - hypothetical protein PSPTO_1185 1 None None None 28869262 Pathogen - hypothetical protein PSPTO_2058 1 None None None 28871084 Common - tail fiber assembly domain protein PSPTO_3934 8 None None None 28867916 Common - lipoprotein, putative PSPTO_0688 1 COG3126 COG3126, Uncharacterized protein conserved in bacteria Function unknown 28870828 Pathogen - hypothetical protein PSPTO_3673 1 None None None 28869437 Common - hypothetical protein PSPTO_2235 1 None None None 28868500 Common - DNA-binding response regulator PSPTO_1290 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28868215 Common - methyl-accepting chemotaxis protein PSPTO_0995 141 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869195 Common anr transcriptional activator Anr PSPTO_1991 163 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 28871537 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PSPTO_4402 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 28870143 Common - hypothetical protein PSPTO_2965 6 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 28871572 Common hisC histidinol-phosphate aminotransferase PSPTO_4437 230 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 28871063 Common - protease II PSPTO_3911 101 COG1770 PtrB, Protease II Amino acid transport and metabolism 28867689 Common soxD-1 sarcosine oxidase, delta subunit PSPTO_0459 34 COG4311 SoxD, Sarcosine oxidase delta subunit Amino acid transport and metabolism 28871139 Common - hypothetical protein PSPTO_3994 20 COG0753 KatE, Catalase Inorganic ion transport and metabolism 28871341 Common - hypothetical protein PSPTO_4199 5 None None None 28868962 Common wbpM nucleotide sugar epimerase/dehydratase WbpM PSPTO_1756 145 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 28870629 Common - hypothetical protein PSPTO_3468 31 COG4529 COG4529, Uncharacterized protein conserved in bacteria Function unknown 28867501 Common - biopolymer transport protein ExbD, putative PSPTO_0269 77 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 28870400 Common - sulfate permease family protein PSPTO_3234 162 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 28870091 Common - glutamine ABC transporter, periplasmic amino acid-binding protein PSPTO_2912 176 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28871540 Common - cell division protein FtsQ, putative PSPTO_4405 73 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 28868584 Pathogen shcE type III chaperone ShcE PSPTO_1376 2 None None None 28868555 Common - gluconate transporter family protein PSPTO_1347 76 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 28868420 Common - iron(III) dicitrate transport protein fecA PSPTO_1207 102 COG4772 FecA, Outer membrane receptor for Fe3+-dicitrate Inorganic ion transport and metabolism 28870015 Common syfB non-ribosomal peptide synthetase SyfB PSPTO_2830 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28870920 Common sbcD exonuclease SbcD PSPTO_3765 100 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 28868596 Pathogen hrpG type III secretion protein HrpG PSPTO_1388 1 None None None 28870040 Common - hypothetical protein PSPTO_2858 5 None None None 28868252 Common - colicin/pyosin nuclease family protein PSPTO_1035 9 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 28868474 Common - hypothetical protein PSPTO_1263 11 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28869365 Pathogen - hypothetical protein PSPTO_2162 1 None None None 28869524 Common - ISPssy, transposase PSPTO_2324 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28870789 Common ccmD heme exporter protein CcmD PSPTO_3632 2 COG3114 CcmD, Heme exporter protein D Intracellular trafficking and secretion 28871275 Common - penicillin amidase family protein PSPTO_4133 74 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 28872453 Common - hypothetical protein PSPTO_5341 43 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 28871705 Pathogen - hypothetical protein PSPTO_4573 1 None None None 28870622 Common glpQ glycerophosphoryl diester phosphodiesterase PSPTO_3461 143 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 28869964 Common - amino acid ABC transporter, ATP-binding protein PSPTO_2778 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28872706 Common - ParB family protein PSPTO_5607 186 COG1475 Spo0J, Predicted transcriptional regulators Transcription 28870851 Common - sensory box histidine kinase/response regulator PSPTO_3696 216 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28867677 Common - hypothetical protein PSPTO_0447 1 None None None 28868376 Pathogen - hypothetical protein PSPTO_1161 1 None None None 28870640 Common - hypothetical protein PSPTO_3479 18 COG3673 COG3673, Uncharacterized conserved protein Function unknown 28872574 Common - hypothetical protein PSPTO_5469 10 None None None 28870061 Common - lipoprotein, putative PSPTO_2879 3 COG3206 GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis Cell envelope biogenesis, outer membrane 28868368 Common - NAD(P)H-flavin oxidoreductase PSPTO_1153 107 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 28867857 Common rplB 50S ribosomal protein L2 PSPTO_0629 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 28868016 Common - phosphonate ABC transporter, permease protein, putative PSPTO_0788 90 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 28867817 Pathogen hopC1 type III effector HopC1 PSPTO_0589 2 None None None 28871203 Common - ISPsy6, transposase PSPTO_4060 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28870855 Common - oxidoreductase, aldo/keto reductase family PSPTO_3700 192 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 28868445 Common algJ alginate biosynthesis protein AlgJ PSPTO_1234 9 None None None 28870006 Pathogen - hypothetical protein PSPTO_2821 2 None None None 28868923 Common cobS cobalamin synthase PSPTO_1717 55 COG0368 CobS, Cobalamin-5-phosphate synthase Coenzyme metabolism 28870779 Common - outer membrane efflux protein PSPTO_3621 117 COG1538 TolC, Outer membrane protein Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 28867300 Common - hypothetical protein PSPTO_0059 13 None None None 28867956 Common - aldehyde dehydrogenase family protein PSPTO_0728 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28871691 Common - peptide ABC transporter, periplasmic peptide-binding protein PSPTO_4557 207 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28872472 Common - hypothetical protein PSPTO_5361 14 None None None 28868078 Common - hypothetical protein PSPTO_0857 29 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 28868693 Common - hypothetical protein PSPTO_1486 6 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28870396 Common - hemolysin activator protein, HlyB family PSPTO_3230 64 COG2831 FhaC, Hemolysin activation/secretion protein Intracellular trafficking and secretion 28869157 Common - hypothetical protein PSPTO_1953 1 None None None 28870576 Common - terminase, large subunit PSPTO_3412 38 COG5525 COG5525, Bacteriophage tail assembly protein General function prediction only 28868716 Common - hypothetical protein PSPTO_1510 178 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 28870881 Common clpP ATP-dependent Clp protease proteolytic subunit PSPTO_3726 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 28867332 Common - aldehyde dehydrogenase family protein PSPTO_0092 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28869218 Common aer-2 aerotaxis receptor PSPTO_2014 161 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28872714 Common rpmH 50S ribosomal protein L34 PSPTO_5615 196 None None None 28867731 Common hopU1 type III effector HopU1 PSPTO_0501 2 None None None 28867760 Common - type IV secretion system protein, putative PSPTO_0531 24 None None None 28870191 Common - transposase/IS protein PSPTO_3014 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28867363 Common - ISPsy8, transposase OrfA PSPTO_0123 20 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867908 Common - lipoprotein, putative PSPTO_0680 21 COG3495 COG3495, Uncharacterized protein conserved in bacteria Function unknown 28868757 Common - cell cycle protein mesJ, putative PSPTO_1551 220 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 28868761 Common - hypothetical protein PSPTO_1555 61 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 28869543 Common - transporter, putative PSPTO_2345 187 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 28867298 Common - transposition helper protein PSPTO_0057 33 COG1100 COG1100, GTPase SAR1 and related small G proteins General function prediction only 28872221 Common - hypothetical protein PSPTO_5108 27 COG4706 COG4706, Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase Lipid metabolism 28867440 Pathogen - hypothetical protein PSPTO_0208 1 None None None 28868586 Common - membrane-bound lytic murein transglycosylase D, putative PSPTO_1378 138 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 28870509 Common serS seryl-tRNA synthetase PSPTO_3345 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 28871036 Common - oxidoreductase, zinc-binding PSPTO_3884 177 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 28872415 Common potG putrescine ABC transporter, ATP-binding protein PSPTO_5303 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28867851 Common fusA elongation factor G PSPTO_0623 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 28870771 Common - ISPsy5, Orf1 PSPTO_3612 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868208 Common - hypothetical protein PSPTO_0988 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 28868361 Common rsmC ribosomal RNA small subunit methyltransferase C PSPTO_1146 106 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 28868289 Common - glycosyl transferase, group 2 family protein PSPTO_1074 178 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 28868248 Pathogen wssF cell morphology protein PSPTO_1031 2 None None None 28871389 Common phaG-2 3-hydroxyacyl-CoA-acyl carrier protein transferase PSPTO_4248 13 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28867375 Common - peptidyl-prolyl cis-trans isomerase, FKBP-type PSPTO_0135 130 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 28868697 Common - sensory box histidine kinase/response regulator PSPTO_1490 217 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28871753 Common - transporter, putative PSPTO_4621 24 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 28872541 Common - hypothetical protein PSPTO_5433 48 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 28870107 Common - DnaJ domain protein PSPTO_2928 10 None None None 28867426 Common - D,D-heptose 1,7-bisphosphate phosphatase PSPTO_0186 128 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 28869169 Common - Hpt domain protein PSPTO_1965 27 COG2198 ArcB, FOG: HPt domain Signal transduction mechanisms 28867604 Common - hypothetical protein PSPTO_0374 1 None None None 28868565 Common amiF formamidase PSPTO_1357 146 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28870114 Common - hypothetical protein PSPTO_2935 90 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 28872105 Common - glycosyl transferase, group 1 family protein PSPTO_4991 219 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28871799 Common - hypothetical protein PSPTO_4667 8 COG3416 COG3416, Uncharacterized protein conserved in bacteria Function unknown 28870861 Common acdA acyl-CoA dehydrogenase PSPTO_3706 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28870599 Common iscS-3 cysteine desulfurase PSPTO_3438 238 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 28867812 Common - transcriptional regulator, Sir2 family PSPTO_0584 152 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 28870878 Common hupB DNA-binding protein HU-beta PSPTO_3723 174 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 28868778 Pathogen - hypothetical protein PSPTO_1572 1 None None None 28871843 Pathogen - hypothetical protein PSPTO_4719 1 None None None 28868053 Common - hypothetical protein PSPTO_0825 4 None None None 28870980 Common holB DNA polymerase III subunit delta' PSPTO_3826 215 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 28871951 Common - DNA binding response regulator, LuxR family PSPTO_4836 218 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28871106 Common nadA quinolinate synthetase PSPTO_3959 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 28871606 Common mreC rod shape-determining protein MreC PSPTO_4471 148 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 28870349 Common - PqiB family protein PSPTO_3179 64 COG3008 PqiB, Paraquat-inducible protein B General function prediction only 28871451 Common purU formyltetrahydrofolate deformylase PSPTO_4314 221 COG0788 PurU, Formyltetrahydrofolate hydrolase Nucleotide transport and metabolism 28871933 Common lipA lipoyl synthase PSPTO_4818 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 28867714 Common - predicted kinase PSPTO_0484 50 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 28869456 Common - hydrolase, TatD family PSPTO_2255 230 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 28869206 Common ccoQ cytochrome c oxidase, cbb3-type, CcoQ subunit PSPTO_2002 11 COG4736 CcoQ, Cbb3-type cytochrome oxidase, subunit 3 Posttranslational modification, protein turnover, chaperones 28870043 Common - 4Fe-4S binding domain protein PSPTO_2861 121 COG2080 CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs Energy production and conversion 28867756 Common - hypothetical protein PSPTO_0527 3 None None None 28872112 Common - lipopolysaccharide biosynthesis protein, putative PSPTO_4998 8 None None None 28872431 Common tauA taurine ABC transporter, periplasmic taurine-binding protein PSPTO_5319 85 COG4521 TauA, ABC-type taurine transport system, periplasmic component Inorganic ion transport and metabolism 28867436 Common - hypothetical protein PSPTO_0202 28 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 28872119 Common aceE pyruvate dehydrogenase subunit E1 PSPTO_5005 141 COG2609 AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component Energy production and conversion 28868940 Common - hypothetical protein PSPTO_1734 111 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 28869985 Common - hypothetical protein PSPTO_2799 14 None None None 28867775 Common - hypothetical protein PSPTO_0547 69 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 28870342 Common - transcriptional regulator, TetR family PSPTO_3171 88 COG1309 AcrR, Transcriptional regulator Transcription 28868400 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_1187 236 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28867971 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSPTO_0743 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28870754 Common ampC beta-lactamase PSPTO_3594 111 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 28871132 Common oprD porin D PSPTO_3987 6 None None None 28871019 Pathogen - hypothetical protein PSPTO_3866 1 None None None 28869768 Common - transcriptional regulator, LysR family PSPTO_2577 189 COG0583 LysR, Transcriptional regulator Transcription 28867288 Common - UvrD/REP helicase family protein PSPTO_0047 206 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 28869821 Common - rhodanese domain protein/cystathionine beta-lyase PSPTO_2632 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 28871792 Common tesB acyl-CoA thioesterase II PSPTO_4660 77 COG1946 TesB, Acyl-CoA thioesterase Lipid metabolism 28868640 Common - hypothetical protein PSPTO_1433 88 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 28868210 Common - hypothetical protein PSPTO_0990 5 None None None 28868540 Common ilvE branched-chain amino acid aminotransferase PSPTO_1332 200 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 28872635 Common cls cardiolipin synthetase PSPTO_5530 153 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 28870136 Common rhtC threonine efflux protein PSPTO_2958 88 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28868838 Common - acetyltransferase, GNAT family PSPTO_1632 65 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 28870551 Common - hypothetical protein PSPTO_3387 8 COG4453 COG4453, Uncharacterized protein conserved in bacteria Function unknown 28869633 Common - amine oxidase, flavin-containing PSPTO_2438 28 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 28872436 Common secB preprotein translocase subunit SecB PSPTO_5324 107 COG1952 SecB, Preprotein translocase subunit SecB Intracellular trafficking and secretion 28871152 Pathogen cro regulatory protein Cro PSPTO_4009 3 None None None 28871886 Common - hypothetical protein PSPTO_4770 4 None None None 28868307 Common mobB-1 mobilization protein MobB PSPTO_1092 8 None None None 28869813 Common - phenazine biosynthesis protein, PhzF family PSPTO_2623 118 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 28870597 Common - lipoprotein, putative PSPTO_3436 2 None None None 28869090 Common sdaA L-serine dehydratase 1 PSPTO_1886 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 28871458 Common - hypothetical protein PSPTO_4321 8 None None None 28871552 Common - hypothetical protein PSPTO_4417 137 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 28871417 Common - nickel/cobalt efflux protein RcnA PSPTO_4280 27 COG2215 COG2215, ABC-type uncharacterized transport system, permease component General function prediction only 28868199 Common - hypothetical protein PSPTO_0979 33 COG3098 COG3098, Uncharacterized protein conserved in bacteria Function unknown 28871962 Common - penicillin-binding protein 1C PSPTO_4847 200 COG4953 PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC Cell envelope biogenesis, outer membrane 28869335 Common - hypothetical protein PSPTO_2132 17 COG4875 COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold Function unknown 28867563 Pathogen - hypothetical protein PSPTO_0332 1 None None None 28869281 Common - hypothetical protein PSPTO_2077 1 None None None 28871348 Common - protozoan/cyanobacterial globin family protein PSPTO_4206 25 COG2346 COG2346, Truncated hemoglobins General function prediction only 28872381 Common - transporter, BCCT family PSPTO_5269 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 28872231 Common hemE uroporphyrinogen decarboxylase PSPTO_5118 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 28869570 Common - inosine/uridine-preferring nucleoside hydrolase PSPTO_2373 88 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 28869589 Common - ISPsy5, Orf1 PSPTO_2392 49 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871530 Common - sensory box histidine kinase PSPTO_4395 217 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 28871209 Common - hypothetical protein PSPTO_4066 9 COG2350 COG2350, Uncharacterized protein conserved in bacteria Function unknown 28869023 Common - hypothetical protein PSPTO_1818 110 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 28869854 Common - spermidine/putrescine ABC transporter, permease protein, putative PSPTO_2666 206 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 28869399 Common sdhA succinate dehydrogenase flavoprotein subunit PSPTO_2197 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 28871569 Common - hypothetical protein PSPTO_4434 125 COG0327 COG0327, Uncharacterized conserved protein Function unknown 28872489 Common - biotin carboxylase/biotin carboxyl carrier protein PSPTO_5381 231 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 28870125 Common - outer membrane porin, OprD family PSPTO_2946 9 None None None 28869277 Pathogen - hypothetical protein PSPTO_2073 1 None None None 28867551 Common - hypothetical protein PSPTO_0320 1 None None None 28868520 Common - ISPssy, transposase PSPTO_1310 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872241 Common pilQ type IV pilus biogenesis protein PilQ PSPTO_5128 143 COG4796 HofQ, Type II secretory pathway, component HofQ Intracellular trafficking and secretion 28869200 Common - copper-translocating P-type ATPase PSPTO_1996 231 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 28869353 Common - pyoverdine sidechain peptide synthetase IV, D-Asp-L-Ser component PSPTO_2150 219 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 158146060 Common - insertion sequence PSPTO_5629 77 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871621 Common pnp polynucleotide phosphorylase/polyadenylase PSPTO_4486 237 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 28869521 Common - ISPsy4, transposase PSPTO_2321 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871221 Common - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_4078 135 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 28868234 Common - integrase/recombinase XerC, putative PSPTO_1015 195 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28868794 Common - hypothetical protein PSPTO_1588 1 None None None 28867973 Pathogen - hypothetical protein PSPTO_0745 1 None None None 28868067 Common - ISPssy, transposase PSPTO_0844 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869835 Common - transcriptional regulator, TetR family PSPTO_2646 35 COG1309 AcrR, Transcriptional regulator Transcription 28870799 Common - acetyltransferase, GNAT family PSPTO_3643 22 COG3153 COG3153, Predicted acetyltransferase General function prediction only 28871559 Common sspA stringent starvation protein A PSPTO_4424 84 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28869673 Common - methyl-accepting chemotaxis protein PSPTO_2480 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870726 Common csrA-3 carbon storage regulator PSPTO_3566 82 COG1551 CsrA, Carbon storage regulator (could also regulate swarming and quorum sensing) Signal transduction mechanisms 28870507 Common - glutathione S-transferase domain protein PSPTO_3343 79 COG0435 ECM4, Predicted glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28870019 Common - beta-lactamase PSPTO_2834 88 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 28872093 Common - multidrug resistance protein PSPTO_4979 116 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 28868096 Pathogen hopD1 type III effector HopD1 PSPTO_0876 4 None None None 28871478 Common - insecticidal toxin protein, putative PSPTO_4342 11 None None None 28872647 Common mdoD glucan biosynthesis protein D PSPTO_5542 50 COG3131 MdoG, Periplasmic glucans biosynthesis protein Inorganic ion transport and metabolism 28871434 Common - hypothetical protein PSPTO_4297 2 None None None 28870932 Common - hypothetical protein PSPTO_3777 70 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 28869647 Common soxB-2 sarcosine oxidase, beta subunit PSPTO_2452 149 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28869299 Pathogen - hypothetical protein PSPTO_2095 1 None None None 28867725 Common bioF 8-amino-7-oxononanoate synthase PSPTO_0495 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 28869617 Common - hypothetical protein PSPTO_2422 145 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 28869400 Common sdhB succinate dehydrogenase iron-sulfur subunit PSPTO_2198 206 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 28872321 Pathogen - hypothetical protein PSPTO_5209 1 None None None 28869318 Common - vacJ lipoprotein, putative PSPTO_2115 94 COG2853 VacJ, Surface lipoprotein Cell envelope biogenesis, outer membrane 28869697 Common - efflux protein, LysE family PSPTO_2504 62 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28868512 Common eda-1 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase PSPTO_1302 125 COG0800 Eda, 2-keto-3-deoxy-6-phosphogluconate aldolase Carbohydrate transport and metabolism 28872480 Common - ISPsy5, Orf1 PSPTO_5371 49 None None None 28870529 Common nuoA NADH dehydrogenase subunit A PSPTO_3365 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 28871376 Common - membrane protein TctA, putative PSPTO_4234 75 COG3333 COG3333, Uncharacterized protein conserved in bacteria Function unknown 28870585 Common - repressor protein c2 PSPTO_3421 36 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28868900 Common relA GTP pyrophosphokinase PSPTO_1694 205 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 28870078 Common - hypothetical protein PSPTO_2899 43 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 28871809 Pathogen - hypothetical protein PSPTO_4677 1 None None None 28868884 Pathogen - hypothetical protein PSPTO_1678 1 None None None 28869415 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase PSPTO_2213 213 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 28871796 Common - ATP-dependent RNA helicase rhlE, putative PSPTO_4664 236 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 28872657 Pathogen - hypothetical protein PSPTO_5552 1 None None None 28868222 Common - acetyltransferase, GNAT family PSPTO_1003 30 COG3153 COG3153, Predicted acetyltransferase General function prediction only 28871868 Common - hypothetical protein PSPTO_4752 2 None None None 28868342 Common - hypothetical protein PSPTO_1127 106 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 28868930 Common - hypothetical protein PSPTO_1724 141 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 28867315 Common gmk guanylate kinase PSPTO_0075 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 28867368 Common hemC porphobilinogen deaminase PSPTO_0128 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 28872295 Common - hypothetical protein PSPTO_5183 1 None None None 28867693 Common - glycine/betaine/L-proline ABC transporter, permease protein PSPTO_0463 210 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 28869029 Common - hypothetical protein PSPTO_1824 1 None None None 28869376 Common leuC isopropylmalate isomerase large subunit PSPTO_2173 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 28871652 Common - non-ribosomal peptide synthetase, initiating component PSPTO_4518 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 28871830 Common corR DNA-binding response regulator CorR PSPTO_4704 154 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28871584 Common - phosphatase, YrbI family PSPTO_4449 104 COG1778 COG1778, Low specificity phosphatase (HAD superfamily) General function prediction only 28868909 Common - DNA replication initiation factor PSPTO_1703 206 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 28872189 Common - hypothetical protein PSPTO_5076 201 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 28867893 Common - ROK family protein PSPTO_0665 132 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 28872567 Common - acyl-CoA dehydrogenase, putative PSPTO_5461 161 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28867737 Common - hypothetical protein PSPTO_0508 108 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 28868383 Common - hypothetical protein PSPTO_1170 14 None None None 28869607 Common ureF-1 urease accessory protein UreF PSPTO_2412 21 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 28871051 Common - acyltransferase family protein PSPTO_3899 161 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28867561 Common - hypothetical protein PSPTO_0330 6 None None None 28870698 Common - hypothetical protein PSPTO_3537 5 None None None 28871161 Common - hypothetical protein PSPTO_4018 25 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 28870282 Common - cointegrate resolution protein S PSPTO_3109 50 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28867544 Common - cyclic nucleotide-binding protein PSPTO_0313 19 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 28871031 Common - hypothetical protein PSPTO_3879 16 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 28872403 Common - hypothetical protein PSPTO_5291 11 COG3204 COG3204, Uncharacterized protein conserved in bacteria Function unknown 28871819 Common cfa8 crotonyl-CoA reductase PSPTO_4689 172 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 28868372 Common - bacterial luciferase family protein PSPTO_1157 81 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28871145 Pathogen avrPto1 type III effector protein AvrPto1 PSPTO_4001 1 None None None 28870794 Common - FlhB domain protein PSPTO_3637 101 COG2257 COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB Function unknown 28870450 Common - hypothetical protein PSPTO_3286 40 COG4291 COG4291, Predicted membrane protein Function unknown 28868896 Common - hypothetical protein PSPTO_1690 1 None None None 28870717 Common glcE glycolate oxidase FAD binding subunit PSPTO_3556 143 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 28872098 Common msbA lipid A ABC transporter, ATP-binding/permease protein PSPTO_4984 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28870307 Common - glycosyl transferase, group 2 family protein PSPTO_3134 37 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28872364 Common - DedA family protein PSPTO_5252 74 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 28872219 Common - lipoprotein, putative PSPTO_5106 3 None None None 28871726 Common hopO1-2 type III effector HopO1-2 PSPTO_4594 2 None None None 28870808 Common - ISPsy5, Orf1 PSPTO_3652 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868341 Common - amine oxidase, flavin-containing PSPTO_1126 41 COG3380 COG3380, Predicted NAD/FAD-dependent oxidoreductase General function prediction only 28870710 Common aefR transcriptional regulator AefR PSPTO_3549 95 COG1309 AcrR, Transcriptional regulator Transcription 28870845 Common - hypothetical protein PSPTO_3690 11 None None None 28868811 Common - sensory box histidine kinase PSPTO_1605 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28868836 Common - hypothetical protein PSPTO_1630 23 COG3089 COG3089, Uncharacterized protein conserved in bacteria Function unknown 28871800 Common - hypothetical protein PSPTO_4668 16 None None None 28872547 Common - ISPssy, transposase PSPTO_5440 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28869037 Common argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein PSPTO_1832 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 28872504 Common rfbB-2 dTDP-glucose 4,6-dehydratase PSPTO_5396 231 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 28872267 Common tatA twin argininte translocase protein A PSPTO_5155 9 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 28871992 Common - cobalamin biosynthesis protein CobG, putative PSPTO_4877 60 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 28868316 Common ychF translation-associated GTPase PSPTO_1101 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 28872408 Common - oxidoreductase, 2OG-Fe(II) oxygenase family PSPTO_5296 30 COG3751 EGL-9, Predicted proline hydroxylase Posttranslational modification, protein turnover, chaperones 28869228 Common - hypothetical protein PSPTO_2024 7 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869483 Common - hypothetical protein PSPTO_2283 20 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 28870919 Common - hypothetical protein PSPTO_3764 35 None None None 28868529 Pathogen - hypothetical protein PSPTO_1321 1 None None None 28870086 Common - GGDEF domain/EAL domain protein PSPTO_2907 178 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28867717 Common - ABC transporter, permease protein PSPTO_0487 209 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 28870688 Common - lipid kinase PSPTO_3527 94 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 28867626 Common - NADH:flavin oxidoreductase/NADH oxidase family protein PSPTO_0396 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 28870663 Common - hypothetical protein PSPTO_3502 56 COG0392 COG0392, Predicted integral membrane protein Function unknown 28870914 Common - moxR protein, putative PSPTO_3759 180 COG0714 COG0714, MoxR-like ATPases General function prediction only 28870667 Common - 5'-methylthioadenosine phosphorylase PSPTO_3506 141 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 28868472 Common - hypothetical protein PSPTO_1261 10 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 28871243 Common hopAK1 type III effector HopAK1 PSPTO_4101 8 COG3866 PelB, Pectate lyase Carbohydrate transport and metabolism 28872302 Common - hypothetical protein PSPTO_5190 90 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 28870647 Pathogen - hypothetical protein PSPTO_3486 1 None None None 28871565 Common - hypothetical protein PSPTO_4430 76 COG2945 COG2945, Predicted hydrolase of the alpha/beta superfamily General function prediction only 28867478 Pathogen - hypothetical protein PSPTO_0246 1 None None None 28870616 Common - 3-oxoacid CoA-transferase, subunit A family PSPTO_3455 96 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 28871596 Common fumC fumarate hydratase PSPTO_4461 215 COG0114 FumC, Fumarase Energy production and conversion 28872290 Common - serine O-acetyltransferase, putative PSPTO_5178 190 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 28871402 Common - transcriptional regulator, TetR family PSPTO_4262 44 COG1309 AcrR, Transcriptional regulator Transcription 28869798 Common - Sco1/SenC family protein PSPTO_2608 101 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 28868493 Common - heme oxygenase, putative PSPTO_1283 11 COG3230 HemO, Heme oxygenase Inorganic ion transport and metabolism 28872014 Common - hypothetical protein PSPTO_4899 17 COG0628 PerM, Predicted permease General function prediction only 28870379 Common - ISPsy5, Orf1 PSPTO_3212 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871368 Common - hypothetical protein PSPTO_4226 1 None None None 28868137 Common ndH NADH dehydrogenase PSPTO_0917 177 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 28868615 Pathogen - hypothetical protein PSPTO_1408 1 None None None 28872110 Common - hypothetical protein PSPTO_4996 3 None None None 28872182 Common metF 5,10-methylenetetrahydrofolate reductase PSPTO_5069 146 COG0685 MetF, 5,10-methylenetetrahydrofolate reductase Amino acid transport and metabolism 28872589 Common pstB-2 phosphate ABC transporter, ATP-binding protein PSPTO_5484 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 162533081 Common rluD ribosomal large subunit pseudouridine synthase D PSPTO_0827 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 28868609 Pathogen hrpQ type III secretion protein HrpQ PSPTO_1401 3 None None None 28869549 Common moaB molybdenum cofactor biosynthesis protein B PSPTO_2352 187 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 28868872 Common - transcriptional regulator, Crp/Fnr family PSPTO_1666 140 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 28871592 Common ptsH phosphocarrier protein HPr PSPTO_4457 143 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 28869681 Common - glutaminase PSPTO_2488 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 28868988 Common - sensor histidine kinase/response regulator PSPTO_1782 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870500 Common - citrate transporter PSPTO_3336 167 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28871045 Common - glyoxalase, putative PSPTO_3893 42 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 28871394 Common gor-2 glutathione reductase PSPTO_4254 243 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 28869150 Common - glycosyl transferase, group 2 family protein PSPTO_1946 135 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 28869996 Common - peptide ABC transporter, permease protein PSPTO_2810 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28868942 Common - ABC transporter, ATP-binding/permease protein PSPTO_1736 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28871355 Common - methyltransferase, putative PSPTO_4213 58 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 28872054 Common hflK hflK protein PSPTO_4940 217 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 28868130 Common cheR-1 chemotaxis protein methyltransferase CheR PSPTO_0910 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 28868650 Common bcpA carboxyphosphonoenolpyruvate phosphonomutase PSPTO_1443 113 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 28869464 Common - hypothetical protein PSPTO_2264 1 None None None 28869805 Common - GAF domain protein PSPTO_2615 13 COG2203 FhlA, FOG: GAF domain Signal transduction mechanisms 28870132 Common - ThiJ/PfpI family protein PSPTO_2954 113 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28871522 Common - hypothetical protein PSPTO_4386 1 None None None 28869593 Common - short chain dehydrogenase PSPTO_2397 237 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28870909 Common - hypothetical protein PSPTO_3754 2 None None None 28871267 Common - hypothetical protein PSPTO_4125 1 COG3776 COG3776, Predicted membrane protein Function unknown 28871405 Common metC-2 cystathionine beta-lyase PSPTO_4265 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 28868646 Common - ISPsy6, transposase PSPTO_1439 52 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871812 Common cfa2 coronafacic acid synthetase, dehydratase component PSPTO_4682 170 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 28869921 Common - acetyltransferase family protein PSPTO_2734 49 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 28872610 Common - transcriptional regulator, putative PSPTO_5505 60 COG2808 PaiB, Transcriptional regulator Transcription 28868321 Common lolB outer membrane lipoprotein LolB PSPTO_1106 54 COG3017 LolB, Outer membrane lipoprotein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 28868110 Common scrY sucrose porin precursor PSPTO_0890 22 COG4580 LamB, Maltoporin (phage lambda and maltose receptor) Carbohydrate transport and metabolism 28870525 Common - hypothetical protein PSPTO_3361 59 COG2850 COG2850, Uncharacterized conserved protein Function unknown 28872210 Common - glycosyl transferase, group 2 family protein PSPTO_5097 100 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28870344 Common - hypothetical protein PSPTO_3173 1 None None None 28867343 Common dadX alanine racemase PSPTO_0103 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 28872630 Common - hypothetical protein PSPTO_5525 16 None None None 28869225 Common - ABC transporter, ATP-binding/permease protein PSPTO_2021 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 28869175 Common fliO flagellar protein FliO PSPTO_1971 15 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 28869630 Common - oxidoreductase, FAD-binding, putative PSPTO_2435 69 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 28872432 Common tauB taurine transporter ATP-binding subunit PSPTO_5320 249 COG4525 TauB, ABC-type taurine transport system, ATPase component Inorganic ion transport and metabolism 28868089 Pathogen - hypothetical protein PSPTO_0868 1 None None None 28869904 Common - sensory box histidine kinase/response regulator PSPTO_2717 217 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28868082 Common - hypothetical protein PSPTO_0861 21 None None None 28869651 Pathogen - hypothetical protein PSPTO_2456 1 None None None 28870535 Common nuoH NADH dehydrogenase subunit H PSPTO_3371 187 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 28867396 Common - hypothetical protein PSPTO_0156 10 COG4575 ElaB, Uncharacterized conserved protein Function unknown 28872512 Common - hypothetical protein PSPTO_5404 46 COG1652 XkdP, Uncharacterized protein containing LysM domain Function unknown 28867794 Common rpe ribulose-phosphate 3-epimerase PSPTO_0566 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 28869726 Common - acetyltransferase, GNAT family PSPTO_2533 30 COG0456 RimI, Acetyltransferases General function prediction only 28872309 Common - ABC transporter, ATP-binding protein PSPTO_5197 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 28868566 Common - ABC transporter, permease protein PSPTO_1358 98 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 28869667 Common - DNA/RNA non-specific endonuclease PSPTO_2474 36 COG1864 NUC1, DNA/RNA endonuclease G, NUC1 Nucleotide transport and metabolism 28870996 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase PSPTO_3843 145 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 28872316 Common - EF hand domain protein PSPTO_5204 28 COG3179 COG3179, Predicted chitinase General function prediction only 28870940 Common - rhomboid family protein PSPTO_3785 31 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 28872037 Common azu azurin PSPTO_4923 18 COG3241 COG3241, Azurin Energy production and conversion 28867512 Common - methionine aminopeptidase, putative PSPTO_0280 169 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 28868763 Common - transcriptional regulator, LysR family PSPTO_1557 173 COG0583 LysR, Transcriptional regulator Transcription 28872685 Common - hypothetical protein PSPTO_5584 62 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 28870328 Common - transcriptional regulator, AsnC family PSPTO_3156 155 COG1522 Lrp, Transcriptional regulators Transcription 28871186 Common - hypothetical protein PSPTO_4043 3 None None None 28871737 Common - hypothetical protein PSPTO_4605 15 COG4688 COG4688, Uncharacterized protein conserved in bacteria Function unknown 28870403 Common - tonB protein, putative PSPTO_3238 9 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 28867684 Common - hypothetical protein PSPTO_0454 17 None None None 28871324 Common ddl D-alanyl-alanine synthetase A PSPTO_4182 212 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 28868115 Pathogen - hypothetical protein PSPTO_0895 1 None None None 28868267 Common - TRAP dicarboxylate transporter, DctQ subunit, putative PSPTO_1050 62 COG3090 DctM, TRAP-type C4-dicarboxylate transport system, small permease component Carbohydrate transport and metabolism 28868362 Common - transporter, LysE family PSPTO_1147 115 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 28869879 Common - membrane protein, TerC family PSPTO_2691 118 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 28870170 Common - acyl-CoA dehydrogenase family protein PSPTO_2992 98 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28868874 Pathogen - hypothetical protein PSPTO_1668 1 None None None 28867841 Common secE preprotein translocase subunit SecE PSPTO_0613 28 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 28871468 Pathogen hopE1 type III effector HopE1 PSPTO_4331 1 None None None 28870177 Pathogen - hypothetical protein PSPTO_2999 1 None None None 28870835 Common - methyl-accepting chemotaxis protein PSPTO_3680 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870370 Pathogen - hypothetical protein PSPTO_3201 2 None None None 28869643 Common - methyl-accepting chemotaxis protein PSPTO_2448 148 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28869457 Common - transglycosylase, SLT family PSPTO_2256 84 COG4623 COG4623, Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein Cell envelope biogenesis, outer membrane 28870414 Common - dipeptide ABC transporter, permease protein DppB, putative PSPTO_3249 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28871661 Common - hypothetical protein PSPTO_4527 28 COG4313 COG4313, Protein involved in meta-pathway of phenol degradation Energy production and conversion 28868623 Common secF preprotein translocase subunit SecF PSPTO_1416 212 COG0341 SecF, Preprotein translocase subunit SecF Intracellular trafficking and secretion 28867934 Common - lipopolysaccharide biosynthesis protein, putative PSPTO_0706 33 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 28872162 Common - YGGT family protein PSPTO_5048 84 COG0762 COG0762, Predicted integral membrane protein Function unknown 28868561 Common - hypothetical protein PSPTO_1353 23 None None None 28869952 Common - ABC transporter, ATP-binding protein PSPTO_2766 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 28867668 Common - hypothetical protein PSPTO_0438 9 None None None 28868676 Common - major facilitator family transporter PSPTO_1469 122 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28871756 Common - methyl-accepting chemotaxis protein PSPTO_4624 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870738 Common - hypothetical protein PSPTO_3578 6 None None None 28872399 Common - hypothetical protein PSPTO_5287 1 COG5528 COG5528, Predicted integral membrane protein Function unknown 28868401 Common - ISPssy, transposase PSPTO_1188 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872126 Common - hypothetical protein PSPTO_5012 9 COG4519 COG4519, Uncharacterized protein conserved in bacteria Function unknown 28869692 Common mntH manganese transport protein MntH PSPTO_2499 97 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 28869989 Common - transcriptional regulator, LysR family PSPTO_2803 173 COG0583 LysR, Transcriptional regulator Transcription 28870945 Common - hypothetical protein PSPTO_3790 27 COG3139 COG3139, Uncharacterized protein conserved in bacteria Function unknown 28871846 Common hopAO1 type III effector HopAO1 PSPTO_4722 7 COG2453 CDC14, Predicted protein-tyrosine phosphatase Signal transduction mechanisms 28870973 Common asd-2 aspartate-semialdehyde dehydrogenase PSPTO_3819 168 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 28870929 Common - hypothetical protein PSPTO_3774 16 COG4104 COG4104, Uncharacterized conserved protein Function unknown 28871510 Common colR DNA-binding response regulator ColR PSPTO_4374 220 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28868024 Common ispB octylprenyl diphosphate synthase PSPTO_0796 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 28867354 Common - GGDEF domain/EAL domain protein PSPTO_0114 177 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 28867422 Common - lipid A biosynthesis lauroyl acyltransferase PSPTO_0182 116 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 28870360 Common - transcriptional regulator, DeoR family PSPTO_3191 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 28872134 Common - acyl-CoA dehydrogenase family protein PSPTO_5020 147 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28868381 Common - acyltransferase family protein PSPTO_1168 35 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28869048 Common - aspartate kinase PSPTO_1843 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 28870023 Common - ISPsy5, Orf1 PSPTO_2839 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868965 Common - hypothetical protein PSPTO_1759 157 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 28872625 Common - cytosolic long-chain acyl-CoA thioester hydrolase family protein PSPTO_5520 136 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 28869974 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_2788 96 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28871097 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase PSPTO_3950 215 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 28869212 Common - ISPssy, transposase PSPTO_2008 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28872526 Common - hypothetical protein PSPTO_5418 47 COG3523 IcmF, Uncharacterized protein conserved in bacteria Function unknown 28872619 Pathogen - hypothetical protein PSPTO_5514 1 None None None 28870189 Common - TonB-dependent sideophore receptor, putative PSPTO_3011 98 COG4771 FepA, Outer membrane receptor for ferrienterochelin and colicins Inorganic ion transport and metabolism 28869791 Common - hypothetical protein PSPTO_2601 35 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28869078 Common hyuE hydantoin racemase PSPTO_1874 44 COG4126 COG4126, Hydantoin racemase Amino acid transport and metabolism 28870892 Common - ABC transporter, permease protein PSPTO_3737 161 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 28871635 Common carB carbamoyl phosphate synthase large subunit PSPTO_4501 236 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 28867462 Common cyaA adenylate cyclase PSPTO_0230 25 COG3072 CyaA, Adenylate cyclase Nucleotide transport and metabolism 28869138 Common flgC flagellar basal body rod protein FlgC PSPTO_1934 124 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 28872667 Common - iron compound ABC transporter, iron compound-binding protein PSPTO_5562 95 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 28871310 Common glpK glycerol kinase PSPTO_4168 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 28869816 Common - amino acid ABC transporter, periplasmic amino acid-binding protein PSPTO_2627 126 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869784 Common nfxB transcriptional regulatory protein NfxB PSPTO_2594 7 None None None 162533077 Common hrcR type III secretion system protein PSPTO_1395 128 COG4790 EscR, Type III secretory pathway, component EscR Intracellular trafficking and secretion 28870218 Common - 5'-nucleotidase, putative PSPTO_3043 31 None None None 28867766 Common dnaG DNA primase PSPTO_0538 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 28869128 Common - hypothetical protein PSPTO_1924 1 COG3418 COG3418, Flagellar biosynthesis/type III secretory pathway chaperone Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 28869625 Common - pyridoxal-phosphate dependent enzyme family protein PSPTO_2430 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 28867266 Pathogen - hypothetical protein PSPTO_0024 1 None None None 28868868 Pathogen - hypothetical protein PSPTO_1662 1 None None None 28871075 Common - hypothetical protein PSPTO_3923 64 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 28870253 Common - hypothetical protein PSPTO_3078 8 None None None 28870635 Common - putative monovalent cation/H+ antiporter subunit E PSPTO_3474 46 COG1863 MnhE, Multisubunit Na+/H+ antiporter, MnhE subunit Inorganic ion transport and metabolism 28871597 Common - hypothetical protein PSPTO_4462 3 None None None 28869071 Common - transcriptional regulator, TetR family PSPTO_1866 55 COG1309 AcrR, Transcriptional regulator Transcription 28869512 Common - CHASE domain/PAS domain protein PSPTO_2312 33 COG3614 COG3614, Predicted periplasmic ligand-binding sensor domain Signal transduction mechanisms 28871069 Common - hypothetical protein PSPTO_3917 1 None None None 28870298 Common glgA glycogen synthase PSPTO_3125 165 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 28871237 Common hrpA ATP-dependent helicase HrpA PSPTO_4095 131 COG1643 HrpA, HrpA-like helicases DNA replication, recombination, and repair 28871379 Pathogen - lipoprotein, putative PSPTO_4237 1 None None None 28871944 Common proA gamma-glutamyl phosphate reductase PSPTO_4829 188 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 28867654 Common - methyltransferase, putative PSPTO_0424 209 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 28868846 Common - hypothetical protein PSPTO_1640 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 28868335 Common - hypothetical protein PSPTO_1120 28 None None None 28867951 Common - hypothetical protein PSPTO_0723 57 COG3228 COG3228, Uncharacterized protein conserved in bacteria Function unknown 28871668 Common - peptide ABC transporter, periplasmic peptide-binding protein, putative PSPTO_4534 208 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28869420 Common - hydrolase, alpha/beta fold family PSPTO_2218 156 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28870515 Common - arginyl-tRNA-protein transferase PSPTO_3351 85 COG2935 COG2935, Putative arginyl-tRNA:protein arginylyltransferase Posttranslational modification, protein turnover, chaperones 28869251 Common - HAD-superfamily hydrolase PSPTO_2047 32 COG4229 COG4229, Predicted enolase-phosphatase Energy production and conversion 28872154 Common pyrB aspartate carbamoyltransferase catalytic subunit PSPTO_5040 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 28869473 Pathogen - hypothetical protein PSPTO_2273 1 None None None 28867894 Pathogen - hypothetical protein PSPTO_0666 1 None None None 28872217 Common - hypothetical protein PSPTO_5104 49 COG0644 FixC, Dehydrogenases (flavoproteins) Energy production and conversion 28867637 Common - drug resistance transporter, EmrB/QacA family PSPTO_0407 196 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28868243 Common wssA cell morphology protein PSPTO_1026 98 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28868539 Common - acetyltransferase, CysE/LacA/LpxA/NodL family PSPTO_1331 167 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 28868394 Common folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase PSPTO_1181 56 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 28869149 Common flgL flagellar hook-associated protein FlgL PSPTO_1945 100 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 28871949 Common - hypothetical protein PSPTO_4834 2 COG4961 TadG, Flp pilus assembly protein TadG Intracellular trafficking and secretion 28867586 Common - hypothetical protein PSPTO_0356 4 None None None 28869719 Common - methyl-accepting chemotaxis protein PSPTO_2526 145 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28870556 Common - hypothetical protein PSPTO_3392 25 COG3499 COG3499, Phage protein U General function prediction only 28867409 Common aroE shikimate 5-dehydrogenase PSPTO_0169 181 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 28871205 Common - mandelate racemase/muconate lactonizing enzyme family protein PSPTO_4062 103 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 28869302 Common - isochorismatase family protein PSPTO_2098 93 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28869734 Common - hypothetical protein PSPTO_2543 50 COG3516 COG3516, Uncharacterized protein conserved in bacteria Function unknown 28872605 Common - sodium/alanine transporter PSPTO_5500 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 28867281 Common - ISPsy5, transposase PSPTO_0039 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28867269 Pathogen - hypothetical protein PSPTO_0027 2 None None None 28871518 Common - MGMT family protein PSPTO_4382 77 COG3695 COG3695, Predicted methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 28869266 Common - hypothetical protein PSPTO_2062 3 None None None 28867370 Common - uroporphyrin-III C-methyltransferase, putative PSPTO_0130 34 COG2959 HemX, Uncharacterized enzyme of heme biosynthesis Coenzyme metabolism 28870849 Common - glycosyl hydrolase, family 3 PSPTO_3694 90 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 28868229 Common phoD alkaline phosphatase D PSPTO_1010 59 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 28869236 Common - glutathione S-transferase family protein PSPTO_2032 101 COG0625 Gst, Glutathione S-transferase Posttranslational modification, protein turnover, chaperones 28869190 Common - ParA family protein PSPTO_1986 198 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28869181 Common flhF flagellar biosynthesis regulator FlhF PSPTO_1977 247 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 28871993 Common cobL precorrin-6Y C5,15-methyltransferase (decarboxylating) PSPTO_4878 103 COG2242 CobL, Precorrin-6B methylase 2 Coenzyme metabolism 28869497 Common - hypothetical protein PSPTO_2297 6 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28869030 Common acsA acetyl-CoA synthetase PSPTO_1825 214 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 28870304 Common - hypothetical protein PSPTO_3131 21 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28868435 Common - hypothetical protein PSPTO_1222 42 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 28869896 Common - precorrin 6A synthase PSPTO_2709 37 COG2243 CobF, Precorrin-2 methylase Coenzyme metabolism 28868419 Common - TonB-dependent siderophore receptor, putative PSPTO_1206 119 COG1629 CirA, Outer membrane receptor proteins, mostly Fe transport Inorganic ion transport and metabolism 28869938 Common - transcriptional regulator, LysR family PSPTO_2751 155 COG0583 LysR, Transcriptional regulator Transcription 28870490 Common - group II intron, maturase PSPTO_3326 90 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 28868734 Common - tetrahydrodipicolinate succinylase, putative PSPTO_1528 42 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 28871543 Common murG N-acetylglucosaminyl transferase PSPTO_4408 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 28870755 Common ada Ada regulatory protein PSPTO_3595 213 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 28869930 Common - transcriptional regulator, MerR family PSPTO_2743 96 COG0789 SoxR, Predicted transcriptional regulators Transcription 28869748 Common phnE phosphonates ABC transporter, permease protein PSPTO_2557 91 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 28871895 Common - hypothetical protein PSPTO_4779 30 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 28868858 Common - hypothetical protein PSPTO_1652 21 COG3617 COG3617, Prophage antirepressor Transcription 28871291 Common nth endonuclease III PSPTO_4149 239 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 28868228 Common - isochorismatase family protein PSPTO_1009 80 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28868306 Common - hypothetical protein PSPTO_1091 5 None None None 28869450 Common - moxR protein, putative PSPTO_2248 171 COG0714 COG0714, MoxR-like ATPases General function prediction only 158146059 Common - binary cytotoxin component PSPTO_5625 3 None None None 28867577 Common thrB homoserine kinase PSPTO_0346 64 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 28867942 Common - autotransporter, putative PSPTO_0714 78 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 28872693 Common - hypothetical protein PSPTO_5592 10 None None None 28870291 Common alkB DNA alkylation damage repair protein AlkB PSPTO_3118 58 COG3145 AlkB, Alkylated DNA repair protein DNA replication, recombination, and repair 28870813 Common - chromosome segregation SMC protein, putative PSPTO_3658 177 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 28872689 Common - dolichyl-phosphate-mannose-protein mannosyltransferase family protein PSPTO_5588 58 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 28867507 Common - DNA-binding protein PSPTO_0275 22 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 28872576 Common - hypothetical protein PSPTO_5471 2 None None None 28871195 Pathogen - hypothetical protein PSPTO_4052 1 None None None 28868105 Common - sucrose-6-phosphate hydrolase PSPTO_0885 53 COG1621 SacC, Beta-fructosidases (levanase/invertase) Carbohydrate transport and metabolism 28869172 Common fliL flagellar basal body-associated protein FliL PSPTO_1968 21 COG1580 FliL, Flagellar basal body-associated protein Cell motility and secretion 28868850 Common recQ ATP-dependent DNA helicase RecQ PSPTO_1644 221 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 28867962 Common - MaoC-like domain protein PSPTO_0734 83 COG2030 MaoC, Acyl dehydratase Lipid metabolism 28867325 Common coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase PSPTO_0085 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 90818607 Pathogen - PSPTO5622 PSPTO_5622 1 None None None 28870583 Common - C4-type zinc finger protein, DksA/TraR family PSPTO_3419 5 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 28868424 Common - hypothetical protein PSPTO_1211 46 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 28868004 Common recC exodeoxyribonuclease V, gamma subunit PSPTO_0776 66 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 28871134 Common - lipoprotein, putative PSPTO_3989 1 None None None 28868155 Common - hypothetical protein PSPTO_0935 24 None None None 28872282 Common blc lipoprotein Blc PSPTO_5170 74 COG3040 Blc, Bacterial lipocalin Cell envelope biogenesis, outer membrane 28872457 Pathogen - hypothetical protein PSPTO_5345 1 None None None 28870883 Pathogen - hypothetical protein PSPTO_3728 1 None None None 28867700 Common - exonuclease, putative PSPTO_0470 96 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 28871702 Pathogen - binary cytotoxin component PSPTO_4570 1 None None None 28870010 Common - iron-sulfur cluster-binding protein, Rieske family PSPTO_2825 82 COG4638 HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit Inorganic ion transport and metabolism / General function prediction only 28872215 Common - hypothetical protein PSPTO_5102 36 COG4258 COG4258, Predicted exporter General function prediction only 28867442 Common - hypothetical protein PSPTO_0210 126 None None None 28871121 Common - hypothetical protein PSPTO_3976 144 COG0824 FcbC, Predicted thioesterase General function prediction only 28868570 Common - hypothetical protein PSPTO_1362 22 COG4776 Rnb, Exoribonuclease II Transcription 28872497 Common - acetyltransferase, GNAT family PSPTO_5389 14 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 28870757 Common - hypothetical protein PSPTO_3597 27 COG2822 COG2822, Predicted periplasmic lipoprotein involved in iron transport Inorganic ion transport and metabolism 28872478 Common - ISPsy5, transposase PSPTO_5368 66 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872359 Common - amino acid ABC transporter, permease protein PSPTO_5247 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28868781 Pathogen - hypothetical protein PSPTO_1575 1 COG1359 COG1359, Uncharacterized conserved protein Function unknown 28870482 Common - beta-glucosidase PSPTO_3318 95 COG1472 BglX, Beta-glucosidase-related glycosidases Carbohydrate transport and metabolism 28868051 Common pilR type 4 fimbriae expression regulatory protein pilR PSPTO_0823 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868261 Pathogen - hypothetical protein PSPTO_1044 1 None None None 28870656 Common - iolD protein PSPTO_3495 220 COG3962 COG3962, Acetolactate synthase Amino acid transport and metabolism 28867989 Common fecD iron(III) dicitrate transport system, permease protein FecD PSPTO_0761 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 28870670 Pathogen - hypothetical protein PSPTO_3509 1 None None None 28867861 Common rplP 50S ribosomal protein L16 PSPTO_0633 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 28869559 Common map-2 methionine aminopeptidase, type I PSPTO_2362 244 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 28872538 Common - hypothetical protein PSPTO_5430 34 COG4104 COG4104, Uncharacterized conserved protein Function unknown 28867788 Common - DNA-binding response regulator, LuxR family PSPTO_0560 215 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28869147 Common flgJ peptidoglycan hydrolase PSPTO_1943 72 COG1705 FlgJ, Muramidase (flagellum-specific) Cell motility and secretion / Intracellular trafficking and secretion 28871927 Common leuS leucyl-tRNA synthetase PSPTO_4812 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 28867920 Common ribBA-1 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein PSPTO_0692 221 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 28870705 Common - hypothetical protein PSPTO_3544 17 None None None 28871143 Common - ISPsy5, Orf1 PSPTO_3998 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869045 Pathogen - hypothetical protein PSPTO_1840 1 None None None 28872001 Common - branched-chain amino acid ABC transporter, permease protein PSPTO_4886 91 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 28869119 Common - bacterial transferase, hexapeptide repeat protein PSPTO_1915 71 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 28872524 Common - serine/threonine protein kinase, putative PSPTO_5416 140 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 28869561 Common endA endonuclease I PSPTO_2364 30 COG2356 EndA, Endonuclease I DNA replication, recombination, and repair 28872146 Common pilI type IV pilus protein PilI PSPTO_5032 72 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 28869779 Pathogen - hypothetical protein PSPTO_2589 1 None None None 28872307 Common - ABC transporter, periplasmic substrate-binding protein PSPTO_5195 22 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28867758 Pathogen - hypothetical protein PSPTO_0529 1 None None None 28871615 Common - Tat (twin-arginine translocation) pathway signal sequence domain protein PSPTO_4480 57 COG3540 PhoD, Phosphodiesterase/alkaline phosphatase D Inorganic ion transport and metabolism 28868708 Common - transcriptional regulator, TetR family PSPTO_1502 7 COG3226 COG3226, Uncharacterized protein conserved in bacteria Function unknown 28870351 Common - transcriptional regulator, putative PSPTO_3181 9 COG1396 HipB, Predicted transcriptional regulators Transcription 28872284 Common hutC histidine utilization repressor PSPTO_5172 125 COG2188 PhnF, Transcriptional regulators Transcription 28870628 Common - sigma-54 dependent transcriptional regulator, putative PSPTO_3467 168 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28868951 Common gyrA DNA gyrase subunit A PSPTO_1745 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 28868974 Common - transcriptional regulator, MarR family PSPTO_1768 119 COG1846 MarR, Transcriptional regulators Transcription 28869275 Common - hypothetical protein PSPTO_2071 2 None None None 28869389 Common - hypothetical protein PSPTO_2187 10 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28869344 Common - cation ABC transporter, periplasmic cation-binding protein PSPTO_2141 175 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 28867682 Common - acyltransferase family protein PSPTO_0452 30 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 28868038 Common - type IV pilus biogenesis protein PSPTO_0810 2 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 28868002 Common - beta alanine--pyruvate transaminase PSPTO_0774 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 28869092 Common - hypothetical protein PSPTO_1888 22 None None None 28869526 Common - extracellular solute-binding protein/sensory box protein PSPTO_2326 140 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 28867883 Common - major facilitator family transporter PSPTO_0655 220 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28868298 Common - peptidase, S24 family PSPTO_1083 29 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 28869830 Pathogen - lipoprotein, putative PSPTO_2641 1 None None None 28871086 Common - tail fiber domain protein PSPTO_3936 4 None None None 28867393 Common - bacterial luciferase family protein PSPTO_0153 110 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28867953 Common - acetyltransferase, GNAT family PSPTO_0725 30 COG0456 RimI, Acetyltransferases General function prediction only 28870032 Common - cytochrome c family protein PSPTO_2849 40 COG3245 CycB, Cytochrome c5 Energy production and conversion 28869478 Common - universal stress protein family PSPTO_2278 42 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 28869659 Common - hydrolase, carbon-nitrogen family PSPTO_2466 75 COG0388 COG0388, Predicted amidohydrolase General function prediction only 28869054 Pathogen - hypothetical protein PSPTO_1849 1 None None None 28871305 Common - hypothetical protein PSPTO_4163 1 None None None 28868914 Common cobO cob(I)yrinic acid a,c-diamide adenosyltransferase PSPTO_1708 142 COG2109 BtuR, ATP:corrinoid adenosyltransferase Coenzyme metabolism 28867914 Common trx-1 thioredoxin PSPTO_0686 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 28868549 Pathogen - hypothetical protein PSPTO_1341 1 None None None 28868204 Common pssA-1 CDP-diacylglycerol--serine O-phosphatidyltransferase PSPTO_0984 133 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 28871108 Pathogen - hypothetical protein PSPTO_3961 1 None None None 28868882 Common - hypothetical protein PSPTO_1676 19 None None None 28870746 Common - transcriptional regulator, LysR family PSPTO_3586 141 COG0583 LysR, Transcriptional regulator Transcription 28870858 Common - HlyD family secretion protein PSPTO_3703 157 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 28871534 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein PSPTO_4399 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 28871288 Common - ParA family protein PSPTO_4146 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28871488 Common - hydrolase, putative PSPTO_4352 82 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 28867578 Common - transcriptional regulator, LacI family PSPTO_0347 127 COG1609 PurR, Transcriptional regulators Transcription 28869435 Common - hypothetical protein PSPTO_2233 2 None None None 28870244 Common - transcriptional regulator, TetR family PSPTO_3069 81 COG1309 AcrR, Transcriptional regulator Transcription 28870359 Common - allantoate amidohydrolase PSPTO_3190 84 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28867415 Common - DNA processing protein DprA, putative PSPTO_0175 209 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 28869669 Common - hypothetical protein PSPTO_2476 1 None None None 28872336 Common - hypothetical protein PSPTO_5224 42 COG3079 COG3079, Uncharacterized protein conserved in bacteria Function unknown 28867814 Common - site-specific recombinase, phage integrase family PSPTO_0586 198 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 28870477 Common - general secretion pathway protein I, putative PSPTO_3313 4 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 28872300 Common metN-1 D-methionine ABC transporter, ATP-binding protein PSPTO_5188 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 28869954 Pathogen - hypothetical protein PSPTO_2768 1 None None None 28871858 Common - hypothetical protein PSPTO_4741 1 None None None 28868480 Common - hypothetical protein PSPTO_1269 1 None None None 28871787 Pathogen - hypothetical protein PSPTO_4655 1 None None None 28870201 Common - DNA-binding protein, putative PSPTO_3025 10 COG1395 COG1395, Predicted transcriptional regulator Transcription 28867644 Common mutM formamidopyrimidine-DNA glycosylase PSPTO_0414 181 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 28871425 Common - hypothetical protein PSPTO_4288 37 COG3762 COG3762, Predicted membrane protein Function unknown 28868135 Common cheY-1 chemotaxis protein CheY PSPTO_0915 206 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28871642 Common fur ferric uptake regulation protein PSPTO_4508 189 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 28870768 Common - ISPsy4, transposase PSPTO_3608 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28869297 Common - lysozyme, putative PSPTO_2093 37 COG3179 COG3179, Predicted chitinase General function prediction only 28869284 Common - hypothetical protein PSPTO_2080 8 None None None 28870447 Common - transcriptional regulator, GntR family PSPTO_3283 147 COG2186 FadR, Transcriptional regulators Transcription 28869787 Common irp5 yersiniabactin synthetase, salycilate ligase component PSPTO_2597 221 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 28869333 Common - DNA-binding response regulator, LuxR family PSPTO_2130 209 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 28868189 Common dksA dnaK suppressor protein PSPTO_0969 142 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 28871744 Common - transcriptional regulator, LysR family PSPTO_4612 193 COG0583 LysR, Transcriptional regulator Transcription 28872360 Common - amino acid ABC transporter, ATP-binding protein PSPTO_5248 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 28867273 Common - Ser/Thr protein phosphatase family protein PSPTO_0031 36 None None None 28871881 Common - ISPsy5, Orf1 PSPTO_4765 50 COG3436 COG3436, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868934 Common - hypothetical protein PSPTO_1728 39 COG3148 COG3148, Uncharacterized conserved protein Function unknown 28869017 Common - Sua5/YciO/YrdC/YwlC family protein PSPTO_1811 218 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 28869009 Common - sensor histidine kinase PSPTO_1803 185 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28869602 Common - hypothetical protein PSPTO_2406 36 COG1959 COG1959, Predicted transcriptional regulator Transcription 28869152 Common - 3-oxoacyl-(acyl-carrier-protein) synthase III, putative PSPTO_1948 199 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 28867901 Common exbB-2 TonB system transport protein ExbB PSPTO_0673 145 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28870119 Common - thiolase family protein PSPTO_2940 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 28867707 Common - hypothetical protein PSPTO_0477 1 None None None 28869010 Pathogen - hypothetical protein PSPTO_1804 1 None None None 28871003 Common - hypothetical protein PSPTO_3850 10 None None None 28868497 Common gap-1 glyceraldehyde-3-phosphate dehydrogenase PSPTO_1287 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 28870786 Common dsbE thiol:disulfide interchange protein DsbE PSPTO_3629 141 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 28869140 Common flgE flagellar hook protein FlgE PSPTO_1936 127 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 28867533 Pathogen - hypothetical protein PSPTO_0302 1 None None None 28871964 Pathogen - hypothetical protein PSPTO_4849 1 COG3847 Flp, Flp pilus assembly protein, pilin Flp Intracellular trafficking and secretion 28868357 Common - hypothetical protein PSPTO_1142 3 None None None 28870634 Common - putative monovalent cation/H+ antiporter subunit D PSPTO_3473 124 COG0651 HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit Energy production and conversion / Inorganic ion transport and metabolism 28872632 Common - hypothetical protein PSPTO_5527 3 None None None 28870678 Common fadB multifunctional fatty acid oxidation complex subunit alpha PSPTO_3517 169 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 28869160 Common fleR sigma-54 dependent transcriptional regulator/response regulator FleR PSPTO_1956 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 28870163 Common - acyl-CoA dehydrogenase family protein PSPTO_2985 139 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 28870558 Common - hypothetical protein PSPTO_3394 7 None None None 28868656 Common guaB inositol-5-monophosphate dehydrogenase PSPTO_1449 240 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 28871079 Pathogen - cold shock domain family protein PSPTO_3929 1 COG1278 CspC, Cold shock proteins Transcription 28870205 Common - peptide ABC transporter, periplasmic peptide-binding protein PSPTO_3029 145 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 28871103 Common - membrane protein, PerM family PSPTO_3956 86 COG0628 PerM, Predicted permease General function prediction only 28868661 Common - hypothetical protein PSPTO_1454 101 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 28868822 Common - GGDEF domain protein PSPTO_1616 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 28872592 Common - phosphate ABC transporter, periplasmic phosphate-binding protein, putative PSPTO_5487 122 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 28868991 Common - hypothetical protein PSPTO_1785 3 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 28869423 Common - lipoprotein, putative PSPTO_2221 99 COG0628 PerM, Predicted permease General function prediction only 28870750 Common - HAD-superfamily hydrolase PSPTO_3590 198 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 28870017 Common syfD syringolide efflux protein SyfD PSPTO_2832 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 28870682 Common - ABC transporter, ATP-binding protein PSPTO_3521 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 28871448 Pathogen - hypothetical protein PSPTO_4311 1 None None None 28871177 Common - cinA domain protein PSPTO_4034 187 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 28868509 Common hexR DNA-binding transcriptional regulator HexR PSPTO_1299 91 COG1737 RpiR, Transcriptional regulators Transcription 28872276 Common pip proline iminopeptidase PSPTO_5164 126 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28870009 Common - auxin-responsive GH3-related protein PSPTO_2824 12 None None None 28870284 Common - sensory box histidine kinase PSPTO_3111 218 COG4191 COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system Signal transduction mechanisms 28870902 Common - drug resistance transporter, EmrB/QacA family PSPTO_3747 200 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28867431 Common - ISPsy4, transposase PSPTO_0194 78 COG4584 COG4584, Transposase and inactivated derivatives DNA replication, recombination, and repair 28871981 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PSPTO_4866 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 28869818 Common - amino acid ABC transporter, permease protein PSPTO_2629 169 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28869287 Pathogen - hypothetical protein PSPTO_2083 1 None None None 28867482 Common - peptide ABC transporter, permease protein PSPTO_0250 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869999 Common - peptide ABC transporter, periplasmic peptide-binding protein PSPTO_2814 201 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 28871561 Common rplM 50S ribosomal protein L13 PSPTO_4426 227 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 28868824 Common - transcriptional regulator, LysR family PSPTO_1618 124 COG0583 LysR, Transcriptional regulator Transcription 28868211 Common - hypothetical protein PSPTO_0991 1 None None None 28867309 Common exbB-1 TonB system transport protein ExbB PSPTO_0069 126 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 28872354 Common rho transcription termination factor Rho PSPTO_5242 209 COG1158 Rho, Transcription termination factor Transcription 28872462 Common - lipoprotein, putative PSPTO_5351 1 None None None 28869100 Common - cytochrome b561 family protein PSPTO_1896 46 COG3658 COG3658, Cytochrome b Energy production and conversion 28872670 Pathogen - hypothetical protein PSPTO_5565 1 None None None 28871672 Common - peptide ABC transporter, permease protein PSPTO_4538 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 28868971 Common efp elongation factor P PSPTO_1765 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 28869756 Common - phosphonate metabolism protein PhnM PSPTO_2565 52 COG3454 COG3454, Metal-dependent hydrolase involved in phosphonate metabolism Inorganic ion transport and metabolism 28870002 Common - hypothetical protein PSPTO_2817 34 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 28870689 Common - IS52, transposase PSPTO_3528 37 COG3039 COG3039, Transposase and inactivated derivatives, IS5 family DNA replication, recombination, and repair 28871687 Common - DNA-binding response regulator PSPTO_4553 205 COG4567 COG4567, Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain Signal transduction mechanisms / Transcription 28867712 Common - hypothetical protein PSPTO_0482 13 None None None 28869717 Common - ABC transporter, ATP-binding protein PSPTO_2524 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28870256 Common - transcriptional regulator, LysR family PSPTO_3081 150 COG0583 LysR, Transcriptional regulator Transcription 28869566 Common rbsC-1 ribose ABC transporter, permease protein PSPTO_2369 137 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 28870273 Common mexF multidrug efflux RND transporter MexF PSPTO_3100 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28869051 Common mgtE magnesium transporter PSPTO_1846 177 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 28869826 Common - senescence marker protein-30 family protein PSPTO_2637 77 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 28867835 Common - peptidase, M23/M37 family PSPTO_0607 188 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 28872441 Common - carboxyl-terminal protease family protein PSPTO_5329 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 28869020 Common - hypothetical protein PSPTO_1814 4 COG3313 COG3313, Predicted Fe-S protein General function prediction only 28871116 Common pal peptidoglycan-associated lipoprotein PSPTO_3971 158 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 28869598 Common - transketolase, C-terminal subunit PSPTO_2402 226 COG3958 COG3958, Transketolase, C-terminal subunit Carbohydrate transport and metabolism 28868197 Common - penicillin-binding protein PSPTO_0977 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 28870105 Common - multidrug transporter, putative PSPTO_2926 222 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872008 Common ttr tabtoxin resistance protein PSPTO_4893 30 COG0456 RimI, Acetyltransferases General function prediction only 28869808 Common argD-2 acetylornithine aminotransferase PSPTO_2618 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 28870955 Common - ISPsy7, transposase PSPTO_3800 101 COG3547 COG3547, Transposase and inactivated derivatives DNA replication, recombination, and repair 28872028 Common - oxidoreductase, short chain dehydrogenase/reductase family PSPTO_4914 236 COG4221 COG4221, Short-chain alcohol dehydrogenase of unknown specificity General function prediction only 28870152 Common modB molybdate ABC transporter, permease protein PSPTO_2974 217 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 28872076 Common - hypothetical protein PSPTO_4962 1 None None None 28871907 Common - hypothetical protein PSPTO_4791 10 COG3264 COG3264, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28870045 Common - aldehyde oxidase and xanthine dehydrogenase family protein PSPTO_2863 106 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 28871414 Common - esterase/lipase/thioesterase family protein PSPTO_4277 109 COG0657 Aes, Esterase/lipase Lipid metabolism 28871211 Common - transcriptional regulator, AraC family PSPTO_4068 74 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 28867438 Pathogen - hypothetical protein PSPTO_0205 1 None None None 28867976 Common - hypothetical protein PSPTO_0748 66 COG1718 RIO1, Serine/threonine protein kinase involved in cell cycle control Signal transduction mechanisms / Cell division and chromosome partitioning 28871773 Common mscL large-conductance mechanosensitive channel PSPTO_4641 134 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 28867601 Common iaaL indoleacetate-lysine ligase PSPTO_0371 8 COG1541 PaaK, Coenzyme F390 synthetase Coenzyme metabolism 28868141 Pathogen - hypothetical protein PSPTO_0921 1 None None None 28871586 Common - ostA family protein PSPTO_4451 61 COG1934 COG1934, Uncharacterized protein conserved in bacteria Function unknown 28872117 Common rfaF ADP-heptose--LPS heptosyltransferase II PSPTO_5003 110 COG0859 RfaF, ADP-heptose:LPS heptosyltransferase Cell envelope biogenesis, outer membrane 28868714 Common ppc phosphoenolpyruvate carboxylase PSPTO_1508 116 COG2352 Ppc, Phosphoenolpyruvate carboxylase Energy production and conversion 28868020 Pathogen - hypothetical protein PSPTO_0792 1 None None None 28869384 Common - transcriptional regulator, IclR family PSPTO_2181 117 COG1414 IclR, Transcriptional regulator Transcription 28871958 Common - esterase/lipase/thioesterase family protein PSPTO_4843 133 COG0657 Aes, Esterase/lipase Lipid metabolism 28868300 Common - hypothetical protein PSPTO_1085 7 None None None 28870042 Common - helicase domain protein PSPTO_2860 39 COG1201 Lhr, Lhr-like helicases General function prediction only 28870867 Common rnhA ribonuclease H PSPTO_3712 179 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 28868168 Common nadC nicotinate-nucleotide pyrophosphorylase PSPTO_0948 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 28870950 Pathogen - hypothetical protein PSPTO_3795 1 None None None 28868891 Common - hypothetical protein PSPTO_1685 82 COG2818 Tag, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 28869516 Common - sensor histidine kinase/response regulator PSPTO_2316 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28870595 Common - transposase/IS protein PSPTO_3432 99 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 28869866 Common hopP1 type III helper protein HopP1 PSPTO_2678 29 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 28872438 Common - rhodanese-like domain protein PSPTO_5326 99 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 28870890 Common - ABC transporter, periplasmic substrate-binding protein, putative PSPTO_3735 40 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28867619 Common - lipoprotein, putative PSPTO_0389 1 None None None 28870723 Common gntR gluconate utilization system GNT-I transcriptional repressor PSPTO_3563 126 COG1609 PurR, Transcriptional regulators Transcription 28868259 Common - transcriptional activator ChrR PSPTO_1042 29 COG3806 ChrR, Transcriptional activator Transcription 28868649 Pathogen - hypothetical protein PSPTO_1442 1 None None None 28870159 Common - isochorismatase family protein PSPTO_2981 131 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 28871346 Common - hypothetical protein PSPTO_4204 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 28870172 Common - ribose ABC transporter, permease protein, putative PSPTO_2994 85 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 28871254 Common - high-affinity amino acid ABC transporter, ATP-binding protein PSPTO_4112 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 28869357 Common - hypothetical protein PSPTO_2154 94 COG1262 COG1262, Uncharacterized conserved protein Function unknown 28869098 Common - DNA-binding response regulator PSPTO_1894 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 28868396 Common - short chain dehydrogenase PSPTO_1183 211 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28870986 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase PSPTO_3832 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 28868282 Common - glycosyl transferase, group 2 family protein PSPTO_1067 97 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 28868755 Common dnaE DNA polymerase III subunit alpha PSPTO_1549 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 28870212 Common - hypothetical protein PSPTO_3036 100 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 28870112 Common - transcriptional regulator, TetR family PSPTO_2933 51 COG1309 AcrR, Transcriptional regulator Transcription 28868726 Common plsB glycerol-3-phosphate acyltransferase PSPTO_1520 48 COG2937 PlsB, Glycerol-3-phosphate O-acyltransferase Lipid metabolism 28872428 Common - sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative PSPTO_5316 110 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 28870217 Pathogen - hypothetical protein PSPTO_3041 1 COG4993 Gcd, Glucose dehydrogenase Carbohydrate transport and metabolism 28868830 Common actP acetate permease PSPTO_1624 175 COG4147 DhlC, Predicted symporter General function prediction only 28870134 Common estB esterase PSPTO_2956 84 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 28867419 Common sun sun protein PSPTO_0179 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 28869571 Common - hypothetical protein PSPTO_2374 1 None None None 28871710 Common - glycine betaine/choline ABC transporter permease protein PSPTO_4578 139 COG1174 OpuBB, ABC-type proline/glycine betaine transport systems, permease component Amino acid transport and metabolism 28870876 Common fabI enoyl-(acyl-carrier-protein) reductase PSPTO_3721 235 COG0623 FabI, Enoyl- acyl-carrier-protein 28869902 Common - sensor histidine kinase/response regulator PSPTO_2715 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28868378 Common - hypothetical protein PSPTO_1165 1 None None None 28871092 Pathogen - hypothetical protein PSPTO_3945 1 None None None 28871920 Common - PhoH-like protein PSPTO_4805 198 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 28872413 Common potI putrescine ABC transporter, permease protein PSPTO_5301 206 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 28869851 Common - transcriptional regulator, LysR family PSPTO_2663 175 COG0583 LysR, Transcriptional regulator Transcription 28868061 Common - ribD C-terminal domain protein PSPTO_0835 173 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 28870398 Common - hypothetical protein PSPTO_3232 34 COG3565 COG3565, Predicted dioxygenase of extradiol dioxygenase family General function prediction only 28870560 Common - major tail sheath protein PSPTO_3396 50 COG3497 COG3497, Phage tail sheath protein FI General function prediction only 28871570 Common - trypsin domain protein PSPTO_4435 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 28870527 Common - type II and III secretion system family protein PSPTO_3363 9 None None None 28867341 Common dadA D-amino acid dehydrogenase small subunit PSPTO_0101 141 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 28868460 Common moaE molybdenum cofactor biosynthesis protein E PSPTO_1249 159 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 28872482 Common - hypothetical protein PSPTO_5374 41 COG3657 COG3657, Uncharacterized protein conserved in bacteria Function unknown 28867803 Common - hypothetical protein PSPTO_0575 6 None None None 28867449 Common glnK nitrogen regulatory protein P-II PSPTO_0217 187 COG0347 GlnK, Nitrogen regulatory protein PII Amino acid transport and metabolism 28869207 Common ccoO cytochrome c oxidase, cbb3-type, subunit II PSPTO_2003 82 COG2993 CcoO, Cbb3-type cytochrome oxidase, cytochrome c subunit Energy production and conversion 28867819 Common - impB/mucB/samB family protein PSPTO_0591 143 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 28871573 Common hisD histidinol dehydrogenase PSPTO_4438 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 28868217 Common - acyltransferase family protein PSPTO_0997 104 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 28871969 Common - hypothetical protein PSPTO_4854 77 COG4965 TadB, Flp pilus assembly protein TadB Intracellular trafficking and secretion 28870193 Common - transcriptional regulator, LacI family PSPTO_3017 51 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 28867596 Common - Na+/H+ antiporter NhaP PSPTO_0366 164 COG0025 NhaP, NhaP-type Na+/H+ and K+/H+ antiporters Inorganic ion transport and metabolism 28869327 Common - hypothetical protein PSPTO_2124 1 None None None 28869762 Common - hypothetical protein PSPTO_2571 97 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 28869001 Common - alkanesulfonate monooxygenase, putative PSPTO_1795 77 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 28868050 Common - transcriptional regulator, TetR family PSPTO_0822 63 COG1309 AcrR, Transcriptional regulator Transcription 28868664 Common - cytidine/deoxycytidylate deaminase family protein PSPTO_1457 217 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 28868808 Common cdd cytosine deaminase PSPTO_1602 206 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 28868925 Common - glutathione peroxidase family protein PSPTO_1719 114 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 28868018 Common - phosphonate ABC transporter, ATP-binding protein, putative PSPTO_0790 248 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 28872420 Common - putative aminotransferase PSPTO_5308 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 28870435 Pathogen - hypothetical protein PSPTO_3271 1 None None None 28869699 Common - lipoprotein, putative PSPTO_2506 1 COG5455 COG5455, Predicted integral membrane protein Function unknown 28870899 Common ppiB peptidyl-prolyl cis-trans isomerase B PSPTO_3744 199 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 28868148 Common - hypothetical protein PSPTO_0928 89 COG1733 COG1733, Predicted transcriptional regulators Transcription 28869966 Common - transcriptional regulator, IclR family PSPTO_2780 89 COG1414 IclR, Transcriptional regulator Transcription 28872021 Common - hypothetical protein PSPTO_4907 46 COG2982 AsmA, Uncharacterized protein involved in outer membrane biogenesis Cell envelope biogenesis, outer membrane 28868958 Pathogen - hypothetical protein PSPTO_1752 1 None None None 28868598 Pathogen hrpT type III secretion protein HrpT PSPTO_1390 1 None None None 28870093 Common - glutamine ABC transporter, permease protein PSPTO_2914 172 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 28868450 Common algE alginate biosynthesis protein AlgE PSPTO_1239 3 None None None 28871703 Common - binary cytotoxin component PSPTO_4571 3 None None None 28868433 Common - fusaric acid resistance protein, putative PSPTO_1220 93 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 28868049 Common - efflux transporter, RND family, MFP subunit PSPTO_0821 90 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28868254 Common - hypothetical protein PSPTO_1037 34 COG5654 COG5654, Uncharacterized conserved protein Function unknown 28868019 Common - phosphonate ABC transporter, periplasmic phosphonate-binding protein, putative PSPTO_0791 99 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 28871709 Common - glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein PSPTO_4577 90 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 28868048 Common - AcrB/AcrD/AcrF family protein PSPTO_0820 176 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 28868039 Common - pillin, putative PSPTO_0811 41 COG4970 FimT, Tfp pilus assembly protein FimT Cell motility and secretion / Intracellular trafficking and secretion 28871698 Common - dipeptide ABC transporter, ATP-binding protein PSPTO_4564 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 28869363 Common - efflux transporter, RND family, MFP subunit PSPTO_2160 170 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 28870927 Common - dihydroxy-acid dehydratase PSPTO_3772 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 28870004 Common - hypothetical protein PSPTO_2819 7 None None None 28872071 Common - ACT domain protein/phosphoserine phosphatase SerB PSPTO_4957 161 COG0560 SerB, Phosphoserine phosphatase Amino acid transport and metabolism 28868323 Common hemA glutamyl-tRNA reductase PSPTO_1108 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 28868695 Common recJ single-stranded-DNA-specific exonuclease RecJ PSPTO_1488 193 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 28870423 Common - peptidase, U32 family PSPTO_3259 140 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 28867334 Common - hypothetical protein PSPTO_0094 59 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 28872640 Common - SPFH domain / Band 7 family protein PSPTO_5535 34 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 28868076 Common - ParA family protein PSPTO_0855 181 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 28869861 Common - aldehyde dehydrogenase family protein PSPTO_2673 222 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 28871782 Common - aldehyde oxidase and xanthine dehydrogenase family protein PSPTO_4650 116 COG1529 CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs Energy production and conversion 28872708 Common gidB glucose-inhibited division protein B PSPTO_5609 203 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 28867929 Common metC-1 cystathionine beta-lyase PSPTO_0701 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 28869159 Common fleS sensor histidine kinase FleS PSPTO_1955 185 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 28868590 Pathogen hrpZ1 type III helper protein HrpZ1 PSPTO_1382 1 COG4907 COG4907, Predicted membrane protein Function unknown 28867833 Common - HesB/YadR/YfhF family protein PSPTO_0605 166 COG0316 IscA, Uncharacterized conserved protein Function unknown 28870184 Common - deaminase AmnE, putative PSPTO_3006 14 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 28870853 Common - transcriptional regulator, TetR family PSPTO_3698 121 COG1309 AcrR, Transcriptional regulator Transcription 28868746 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase PSPTO_1540 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 28869771 Common - hypothetical protein PSPTO_2580 25 COG3503 COG3503, Predicted membrane protein Function unknown 28871824 Common - ISPsy13, transposase OrfA PSPTO_4695 28 None None None 28872103 Common - hypothetical protein PSPTO_4989 3 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 28871148 Pathogen - hypothetical protein PSPTO_4005 1 None None None 28870773 Common - site-specific recombinase, phage integrase family PSPTO_3615 7 None None None 28870056 Common - ppkA-related protein PSPTO_2874 9 None None None 28868246 Common wssD endo-1,4-D-glucanase PSPTO_1029 35 COG3405 CelA, Endoglucanase Y Carbohydrate transport and metabolism 28868553 Common gnl gluconolactonase PSPTO_1345 71 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 28871034 Common - polyamine ABC transporter, ATP-binding protein, putative PSPTO_3882 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 28867679 Common - ISPsy8, transposase OrfA PSPTO_0449 20 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868278 Common - methyl-accepting chemotaxis protein PSPTO_1061 146 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 28871461 Pathogen - hypothetical protein PSPTO_4324 1 None None None 28869913 Common - hypothetical protein PSPTO_2726 27 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 28871826 Common - ISPs1, transposase OrfB PSPTO_4697 36 COG3293 COG3293, Transposase and inactivated derivatives DNA replication, recombination, and repair 28868699 Common - leucine-rich repeat domain protein PSPTO_1492 7 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 28869688 Common - hydrolase, alpha/beta fold family PSPTO_2495 125 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 28868190 Common - hypothetical protein PSPTO_0970 236 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 28871798 Common - hypothetical protein PSPTO_4666 56 COG1432 COG1432, Uncharacterized conserved protein Function unknown 28868088 Common - hypothetical protein PSPTO_0867 19 None None None