Bacillus cereus ATCC 10987, complete genome NC_003909 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 42781342 Common - SCO1/SenC family lipoprotein BCE_2278 79 COG1999 COG1999, Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems General function prediction only 42781309 Common - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, degenerate BCE_2244 212 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 42779580 Pathogen - hypothetical protein BCE_0500 1 None None None 42783266 Pathogen - hypothetical protein BCE_4220 1 None None None 42783875 Common - hypothetical protein BCE_4829 2 None None None 42779195 Common rpsS 30S ribosomal protein S19 BCE_0114 240 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 42784499 Common - stage II sporulation protein R, putative BCE_5454 15 None None None 42781534 Common - hypothetical protein BCE_2472 12 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 42779589 Pathogen - hypothetical protein BCE_0509 1 None None None 42780019 Common - ABC transporter, ATP-binding/permease protein BCE_0943 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42780337 Pathogen - hypothetical protein BCE_1263 1 None None None 42782650 Common - hypothetical protein BCE_3600 121 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42781537 Common - ABC transporter, ATP-binding/permease protein BCE_2475 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42784383 Common cydA cytochrome d ubiquinol oxidase, subunit I BCE_5338 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 42781370 Common - glycosyl transferase, group 2 family protein BCE_2306 43 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42780630 Common - hypothetical protein BCE_1556 5 COG2306 COG2306, Uncharacterized conserved protein Function unknown 42782919 Common codY transcriptional repressor CodY BCE_3869 20 COG4465 CodY, Pleiotropic transcriptional repressor Transcription 42781830 Common - hypothetical protein BCE_2773 4 None None None 42781130 Common - lipoprotein, putative BCE_2062 2 None None None 42784270 Common - iron compound ABC transporter, permease protein BCE_5224 135 COG4605 CeuC, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 42780444 Pathogen - hypothetical protein BCE_1370 1 None None None 42782711 Common ureE urease accessory protein UreE BCE_3661 41 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 42783697 Common - enoyl-CoA hydratase BCE_4651 179 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 42784135 Common - hypothetical protein BCE_5089 14 COG1267 PgpA, Phosphatidylglycerophosphatase A and related proteins Lipid metabolism 42780066 Common - transcriptional activator, AraC family BCE_0990 135 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 42780423 Common - hypothetical protein BCE_1349 38 COG2382 Fes, Enterochelin esterase and related enzymes Inorganic ion transport and metabolism 42783595 Common valS valyl-tRNA synthetase BCE_4549 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42780547 Common - ABC transporter, ATP-binding protein BCE_1473 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42780179 Pathogen - hypothetical protein BCE_1103 1 None None None 42781150 Pathogen - hypothetical protein BCE_2084 1 None None None 42783205 Common - hypothetical protein BCE_4159 2 None None None 42781156 Pathogen - hypothetical protein BCE_2090 1 None None None 42784138 Common - hypothetical protein BCE_5092 24 None None None 42784337 Common cccB cytochrome c-551 BCE_5291 4 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 42780987 Common fsR fosmidomycin resistance protein BCE_1918 129 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42779650 Common - cell division inhibitor-like protein BCE_0570 116 COG1090 COG1090, Predicted nucleoside-diphosphate sugar epimerase General function prediction only 42780427 Common - sodium/proline symporter family protein BCE_1353 190 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 42779369 Common groES co-chaperonin GroES BCE_0288 216 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 42780212 Pathogen - hypothetical protein BCE_1137 1 None None None 42780516 Common - transcriptional regulator, DeoR family BCE_1442 115 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 42783362 Common - comG operon protein 6, putative BCE_4316 2 COG4940 ComGF, Competence protein ComGF Intracellular trafficking and secretion 42781044 Common dra deoxyribose-phosphate aldolase BCE_1975 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 161511016 Common maP methionine aminopeptidase BCE_5486 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 42784491 Common - hypothetical protein BCE_5446 54 COG2259 COG2259, Predicted membrane protein Function unknown 42781680 Common - ABC transporter, ATP-binding protein BCE_2621 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42784547 Common - transcriptional regulator, MerR family BCE_5502 144 COG0789 SoxR, Predicted transcriptional regulators Transcription 42781687 Common ddl D-alanine--D-alanine ligase BCE_2628 230 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 42782746 Pathogen - hypothetical protein BCE_3696 1 None None None 42779828 Common uppP undecaprenyl pyrophosphate phosphatase BCE_0750 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 42784441 Common galU UTP-glucose-1-phosphate uridylyltransferase BCE_5396 234 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 42780725 Common qcrC menaquinol-cytochrome c reductase, cytochrome b/c subunit BCE_1651 27 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 42779843 Common - hypothetical protein BCE_0765 2 None None None 42783270 Common - amino acid ABC transporter, permease protein BCE_4224 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42782982 Common pyrB aspartate carbamoyltransferase catalytic subunit BCE_3934 240 COG0540 PyrB, Aspartate carbamoyltransferase, catalytic chain Nucleotide transport and metabolism 42780833 Common fliD flagellar capping protein BCE_1760 79 COG1345 FliD, Flagellar capping protein Cell motility and secretion 42784062 Common menF menaquinone-specific isochorismate synthase BCE_5016 223 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42779759 Common sspH acid-soluble spore protein H BCE_0681 3 None None None 42781124 Common - transcription antiterminator, LytR family BCE_2056 63 COG1316 LytR, Transcriptional regulator Transcription 42780107 Common - hypothetical protein BCE_1031 99 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42784212 Pathogen - hypothetical protein BCE_5166 1 None None None 42783199 Common corA magnesium and cobalt transport protein CorA BCE_4153 180 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 42779276 Common - ABC transporter, permease protein BCE_0195 100 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 42782288 Pathogen - hypothetical protein BCE_3233 2 None None None 42782063 Pathogen - hypothetical protein BCE_3007 1 None None None 42782324 Common - permease, putative BCE_3270 146 None None None 42782828 Common - phosphoglycerate mutase family protein, putative BCE_3778 31 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42781594 Common - penicillin-binding protein BCE_2533 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42782987 Common - hypothetical protein BCE_3939 1 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 42781302 Common - hypothetical protein BCE_2237 11 COG3815 COG3815, Predicted membrane protein Function unknown 42783757 Common - hypothetical protein BCE_4711 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 42779291 Common - lipoprotein, putative BCE_0210 1 None None None 42782261 Common - acetyltransferase, GNAT family BCE_3206 1 None None None 42784225 Pathogen - hypothetical protein BCE_5179 1 None None None 42784025 Pathogen - hypothetical protein BCE_4979 1 None None None 42780859 Common fliP flagellar biosynthesis protein FliP BCE_1786 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 42783001 Pathogen - hypothetical protein BCE_3953 1 None None None 42779110 Common holB DNA polymerase III subunit delta' BCE_0029 226 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 42783316 Common efp elongation factor P BCE_4270 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 42781386 Common - aldehyde dehydrogenase family protein BCE_2323 226 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42783458 Common - conserved hypothetical protein TIGR00488 BCE_4412 43 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 42780717 Common aroF chorismate synthase BCE_1643 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 42780499 Common - maoC family protein BCE_1425 102 COG2030 MaoC, Acyl dehydratase Lipid metabolism 42783907 Common moaD molybdopterin converting factor, subunit 1 BCE_4861 22 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 42779504 Pathogen - hypothetical protein BCE_0423 1 None None None 42780207 Common - RNA polymerase factor sigma C BCE_1131 157 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42782008 Pathogen - hypothetical protein BCE_2952 1 None None None 42784410 Common - hypothetical protein BCE_5365 13 COG5652 COG5652, Predicted integral membrane protein Function unknown 42779956 Common - hypothetical protein BCE_0880 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 42783633 Common gerM germination protein gerM BCE_4587 12 COG5401 COG5401, Spore germination protein General function prediction only 42779476 Common - hypothetical protein BCE_0395 8 None None None 42781463 Common dhbE 2,3-dihydroxybenzoate-AMP ligase BCE_2400 222 COG1021 EntE, Peptide arylation enzymes Secondary metabolites biosynthesis, transport, and catabolism 42782647 Pathogen - hypothetical protein BCE_3597 1 None None None 42783479 Pathogen - phosphoglycerate mutase family, putative BCE_4433 1 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42782763 Common - glycosyl hydrolase, family 25, putative BCE_3713 50 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 42782978 Common pyrK dihydroorotate dehydrogenase electron transfer subunit BCE_3930 88 COG0543 UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases Coenzyme metabolism / Energy production and conversion 42783946 Common - phospholipase, putative BCE_4900 120 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 42784281 Common - hypothetical protein BCE_5235 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 42784015 Common - DNA-binding response regulator BCE_4969 219 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42780457 Pathogen - hypothetical protein BCE_1383 1 None None None 42782031 Common - acetyltransferase, GNAT family BCE_2975 52 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783570 Common - hypothetical protein BCE_4524 79 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 42784665 Common rplI 50S ribosomal protein L9 BCE_5620 197 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 42782827 Pathogen - hypothetical protein BCE_3777 1 None None None 42782967 Common - fibronectin/fibrinogen-binding protein, putative BCE_3919 82 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 42782479 Common - hypothetical protein BCE_3426 24 None None None 42781656 Pathogen - lipoprotein, putative BCE_2595 1 None None None 42780788 Common rnhA ribonuclease H BCE_1714 35 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 42781116 Common - hypothetical protein BCE_2048 2 None None None 42781940 Common - ankyrin BCE_2884 90 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 42784252 Common - oxidoreductase, aldo/keto reductase family BCE_5206 154 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 42781546 Common - hypothetical protein BCE_2484 3 COG5164 SPT5, Transcription elongation factor Transcription 42782751 Common - hypothetical protein BCE_3701 5 None None None 42779985 Common - amino acid permease family protein BCE_0909 192 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42782842 Pathogen - hypothetical protein BCE_3792 1 None None None 42783688 Common - 4-hydroxybenzoyl-CoA thioesterase, putative BCE_4642 58 COG0824 FcbC, Predicted thioesterase General function prediction only 42779865 Common - transporter, AcrB/AcrD/AcrF family BCE_0788 177 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 42782568 Common - trancscriptional regulator MtrR, putative BCE_3517 20 COG1309 AcrR, Transcriptional regulator Transcription 42783239 Common nhaC Na+/H+ antiporter NhaC BCE_4193 64 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 42780875 Common - sortase family protein BCE_1804 21 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 42780942 Common ykwA malate oxidoreductase BCE_1873 140 COG0281 SfcA, Malic enzyme Energy production and conversion 42782089 Common - transcriptional regulator, IclR family BCE_3033 119 COG1414 IclR, Transcriptional regulator Transcription 42779575 Common - ABC transporter, ATP-binding protein BCE_0495 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42782444 Common - ATP synthase protein I, putative BCE_3391 2 None None None 42780122 Common pssA CDP-diacylglycerol--serine O-phosphatidyltransferase BCE_1046 155 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 42780781 Common - 5'-3' exonuclease family protein BCE_1707 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 42781375 Common - permease, putative BCE_2311 34 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 42783438 Common - conserved hypothetical protein TIGR00046 BCE_4392 199 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 42780043 Common - hypothetical protein BCE_0967 2 None None None 42783073 Common - hypothetical protein BCE_4026 160 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 42779116 Common abrB transition state transcriptional regulatory protein AbrB BCE_0035 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 42779348 Common - ATP-dependent RNA helicase, DEAD/DEAH box family BCE_0267 243 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 42781213 Pathogen - hypothetical protein BCE_2147 1 None None None 42784259 Common - SET domain protein BCE_5213 8 COG2940 COG2940, Proteins containing SET domain General function prediction only 42779094 Common serS seryl-tRNA synthetase BCE_0013 245 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 42782238 Common - TspO/MBR family protein BCE_3183 60 COG3476 COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) Signal transduction mechanisms 42779599 Common - cation-transporting ATPase, E1-E2 family BCE_0519 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 42784672 Common - hypothetical protein BCE_5627 27 COG4481 COG4481, Uncharacterized protein conserved in bacteria Function unknown 42782971 Pathogen - hypothetical protein BCE_3923 1 None None None 42783069 Pathogen - hypothetical protein BCE_4022 1 None None None 42783911 Common moaC molybdenum cofactor biosynthesis protein C BCE_4865 195 COG0315 MoaC, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 42779105 Pathogen - hypothetical protein BCE_0024 1 None None None 42780654 Pathogen - hypothetical protein BCE_1581 1 None None None 42782963 Common - hypothetical protein BCE_3915 33 COG2052 COG2052, Uncharacterized protein conserved in bacteria Function unknown 42783042 Common pyc pyruvate carboxylase BCE_3994 240 COG1038 PycA, Pyruvate carboxylase Energy production and conversion 161511022 Common - DNA polymerase IV BCE_4214 185 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 42782301 Common - permease, putative BCE_3246 163 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42784543 Common - agmatinase, putative BCE_5498 161 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 42780619 Common sat sulfate adenylyltransferase BCE_1545 64 COG2046 MET3, ATP sulfurylase (sulfate adenylyltransferase) Inorganic ion transport and metabolism 42781103 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_2034 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42779246 Pathogen - hypothetical protein BCE_0165 1 None None None 42783104 Common - hypothetical protein BCE_4057 3 None None None 42780589 Pathogen - hypothetical protein BCE_1515 1 None None None 42782017 Common - sulfonate ABC transporter, ATP-binding protein, putative BCE_2961 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 42780075 Common - hypothetical protein BCE_0999 7 None None None 42780154 Pathogen - lipoprotein, putative BCE_1078 1 None None None 42780667 Common - superoxide dismutase BCE_1593 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 42782892 Common - hypothetical protein BCE_3842 15 COG1873 COG1873, Uncharacterized conserved protein Function unknown 42783232 Common - bioH protein, putative BCE_4186 65 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783585 Common spoIVFA stage IV sporulation protein FA BCE_4539 69 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 42782775 Common - hypothetical protein BCE_3725 11 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 42783890 Common - pullulanase, putative BCE_4844 153 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 42779360 Common - conserved hypothetical protein TIGR00150 BCE_0279 209 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 42780506 Common - sodium transporter family protein BCE_1432 110 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42783071 Common - hydrolase, haloacid dehalogenase-like family BCE_4024 127 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42779538 Common - hypothetical protein BCE_0458 2 COG5310 COG5310, Homospermidine synthase Secondary metabolites biosynthesis, transport, and catabolism 42782610 Common - conserved repeat domain protein BCE_3560 62 None None None 42783518 Pathogen - hypothetical protein BCE_4472 2 None None None 42781584 Pathogen - hypothetical protein BCE_2522 1 None None None 42781033 Common - 2-dehydropantoate 2-reductase BCE_1964 98 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 42782334 Common - MccC family protein BCE_3281 77 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 42783430 Common - HDIG domain protein BCE_4384 56 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 42780227 Common ecsA ABC transporter, ATP-binding protein EcsA BCE_1152 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42779829 Common - methyl-accepting chemotaxis protein BCE_0751 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42784179 Common - PAP2 family protein BCE_5133 20 None None None 42781426 Pathogen - hypothetical protein BCE_2363 1 None None None 42782379 Common - LPXTG-motif cell wall anchor domain protein BCE_3326 8 None None None 42780646 Common - transcriptional regulator, putative BCE_1572 57 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 42780674 Common resC resC protein BCE_1600 92 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 42780713 Common - heptaprenyl diphosphate synthase component I, putative BCE_1639 4 None None None 42784487 Common - conserved hypothetical protein TIGR01440 BCE_5442 16 COG4475 COG4475, Uncharacterized protein conserved in bacteria Function unknown 42782093 Common - proteinase BCE_3037 18 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 42782170 Common - NAD-dependent deacetylase BCE_3115 151 COG0846 SIR2, NAD-dependent protein deacetylases, SIR2 family Transcription 42781820 Pathogen - hypothetical protein BCE_2763 1 None None None 42784659 Common yycG sensory box histidine kinase YycG BCE_5614 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42780555 Common - hypothetical protein BCE_1481 4 None None None 42784476 Common atpG F0F1 ATP synthase subunit gamma BCE_5431 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 42780198 Pathogen - hypothetical protein BCE_1122 1 None None None 42782974 Common - hypothetical protein BCE_3926 2 None None None 42784206 Common - hypothetical protein BCE_5160 13 None None None 42782126 Pathogen - hypothetical protein BCE_3070 1 None None None 42784498 Common - hypothetical protein BCE_5453 1 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 42781635 Common - hypothetical protein BCE_2574 6 None None None 42781241 Common - hypothetical protein BCE_2175 6 None None None 42784191 Pathogen - hypothetical protein BCE_5145 1 None None None 42780851 Common - hypothetical protein BCE_1778 2 None None None 42779514 Common - mandelate racemase/muconate lactonizing enzyme family protein BCE_0433 155 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 42784152 Pathogen - hypothetical protein BCE_5106 1 None None None 42784417 Common - ABC transporter, permease protein BCE_5372 184 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42783629 Pathogen - hypothetical protein BCE_4583 1 None None None 42781445 Common mmsA methylmalonic acid semialdehyde dehydrogenase BCE_2382 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42782298 Common - hypothetical protein BCE_3243 4 None None None 42780290 Common - RNA polymerase sigma factor BCE_1215 127 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42780473 Common potB spermidine/putrescine ABC transporter, permease protein BCE_1399 217 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 42782871 Common - zinc protease, insulinase family BCE_3821 190 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 42781078 Common - cobalamin synthesis protein/P47K family protein BCE_2009 128 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 42783407 Common - cation ABC transporter, ATP-binding protein, putative BCE_4361 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 42782027 Pathogen - lipoprotein, putative BCE_2971 1 None None None 42780562 Common - hypothetical protein BCE_1488 4 None None None 42782905 Common - hypothetical protein BCE_3855 156 COG0779 COG0779, Uncharacterized protein conserved in bacteria Function unknown 42784438 Common - UDP-galactose phosphate transferase BCE_5393 181 COG2148 WcaJ, Sugar transferases involved in lipopolysaccharide synthesis Cell envelope biogenesis, outer membrane 42780183 Pathogen - hypothetical protein BCE_1106 1 None None None 42780230 Pathogen - hypothetical protein BCE_1155 1 None None None 42784131 Common - hypothetical protein BCE_5085 5 COG4837 COG4837, Uncharacterized protein conserved in bacteria Function unknown 42780306 Pathogen - hypothetical protein BCE_1231 1 None None None 42782523 Pathogen - hypothetical protein BCE_3472 1 None None None 42779163 Common radA DNA repair protein RadA BCE_0082 216 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 42780790 Common - hypothetical protein BCE_1716 18 COG4708 COG4708, Predicted membrane protein Function unknown 42783379 Common - bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein BCE_4333 178 COG0646 MetH, Methionine synthase I (cobalamin-dependent), methyltransferase domain Amino acid transport and metabolism 42782286 Common - hypothetical protein BCE_3231 77 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 42779512 Common - hypothetical protein BCE_0431 146 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 42783618 Pathogen - hypothetical protein BCE_4572 1 None None None 42779765 Common - hypothetical protein BCE_0687 59 COG4976 COG4976, Predicted methyltransferase (contains TPR repeat) General function prediction only 42779387 Common - glycosyl transferase, group 1 family protein BCE_0306 5 None None None 42784305 Common - hypothetical protein BCE_5259 140 COG1660 COG1660, Predicted P-loop-containing kinase General function prediction only 42779601 Common - low molecular weight phosphotyrosine protein phosphatase family protein BCE_0521 137 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 42779437 Common gabD succinate-semialdehyde dehydrogenase (NADP+) BCE_0356 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42779649 Common - chlorohydrolase family protein BCE_0569 43 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 42780033 Common alsD alpha-acetolactate decarboxylase BCE_0957 40 COG3527 AlsD, Alpha-acetolactate decarboxylase Secondary metabolites biosynthesis, transport, and catabolism 42783408 Common - hypothetical protein BCE_4362 50 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42784298 Common - hypothetical protein BCE_5252 5 None None None 42781972 Common - drug resistance transporter, EmrB/QacA family BCE_2916 230 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782216 Common - isochorismatase family protein BCE_3161 78 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42782781 Common glnA glutamine synthetase, type I BCE_3731 228 COG0174 GlnA, Glutamine synthetase Amino acid transport and metabolism 42779934 Common - stage V sporulation protein R, truncation BCE_0858 40 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 42780351 Common - cell wall-associated protein BCE_1277 3 None None None 42780816 Pathogen - hypothetical protein BCE_1743 1 None None None 42783654 Common - DNA recombinase, putative BCE_4608 76 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42780955 Common - hypothetical protein BCE_1886 7 None None None 42784167 Pathogen - hypothetical protein BCE_5121 1 None None None 42782617 Common panF sodium/panthothenate symporter BCE_3567 184 COG4145 PanF, Na+/panthothenate symporter Coenzyme metabolism 42783210 Pathogen - hypothetical protein BCE_4164 1 None None None 42781695 Common - IS231-related transposase BCE_2636 5 None None None 42780114 Common - hypothetical protein BCE_1038 13 COG4188 COG4188, Predicted dienelactone hydrolase General function prediction only 42779699 Common - sensor histidine kinase BCE_0620 129 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 42781846 Common - mutT/nudix family protein BCE_2789 41 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42779913 Pathogen - hypothetical protein BCE_0837 1 None None None 42781979 Common - hypothetical protein BCE_2923 2 COG5141 COG5141, PHD zinc finger-containing protein General function prediction only 42783999 Pathogen - hypothetical protein BCE_4953 1 None None None 42782361 Common - transcriptional regulator, MarR family BCE_3308 19 COG1846 MarR, Transcriptional regulators Transcription 42781270 Common - hypothetical protein BCE_2205 174 COG0714 COG0714, MoxR-like ATPases General function prediction only 42779739 Pathogen - hypothetical protein BCE_0661 1 None None None 42782438 Common - hypothetical protein BCE_3385 84 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42782732 Common - hypothetical protein BCE_3682 104 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42783020 Common - PDZ domain protein BCE_3972 151 COG3480 SdrC, Predicted secreted protein containing a PDZ domain Signal transduction mechanisms 42783712 Common - heme-degrading monooxygenase IsdG BCE_4666 15 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 42782514 Common - cyclic nucleotide-binding domain protein BCE_3461 19 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 42783897 Common - drug resistance transporter, EmrB/QacA family BCE_4851 232 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783329 Pathogen - hypothetical protein BCE_4283 1 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 42783550 Common - hypothetical protein BCE_4504 39 None None None 42784374 Common - hypothetical protein BCE_5329 14 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42782213 Common - bromoperoxidase BCE_3158 155 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42784662 Common purA adenylosuccinate synthetase BCE_5617 235 COG0104 PurA, Adenylosuccinate synthase Nucleotide transport and metabolism 42781358 Common - penicillin-binding protein, putative BCE_2294 150 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42782308 Common - Transcriptional regulator, putative BCE_3253 25 COG1309 AcrR, Transcriptional regulator Transcription 42784370 Common celB PTS system, cellobiose-specific IIC component BCE_5325 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 42779946 Common - rhodanese domain protein BCE_0870 134 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 42779406 Common purM phosphoribosylaminoimidazole synthetase BCE_0325 232 COG0150 PurM, Phosphoribosylaminoimidazole (AIR) synthetase Nucleotide transport and metabolism 42780907 Common - hypothetical protein BCE_1837 77 COG0701 COG0701, Predicted permeases General function prediction only 42781071 Common - 2-hydroxychromene-2-carboxylate isomerase family protein BCE_2002 66 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 42779998 Common - oxidoreductase, short-chain dehydrogenase/reductase family BCE_0922 224 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42779749 Pathogen - hypothetical protein BCE_0671 1 None None None 42781961 Common lrp transcriptional regulator, Lrp/AsnC family BCE_2905 153 COG1522 Lrp, Transcriptional regulators Transcription 42781492 Pathogen - lipoprotein, putative BCE_2430 1 None None None 42784552 Common - 4-oxalocrotonate tautomerase BCE_5507 35 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 42779623 Common truA tRNA pseudouridine synthase A BCE_0543 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 42779708 Common - glycerol-3-phosphate ABC transporter, ATP-binding protein, putative BCE_0629 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 42781515 Common - hypothetical protein BCE_2453 2 None None None 42779963 Common - hypothetical protein BCE_0887 25 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 42781644 Pathogen - hypothetical protein BCE_2583 1 None None None 42781668 Common - hypothetical protein BCE_2608 23 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 42784425 Common galE UDP-glucose 4-epimerase BCE_5380 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 42784444 Common - chain length determinant protein BCE_5399 60 COG3944 COG3944, Capsular polysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 42783770 Common citC isocitrate dehydrogenase BCE_4724 222 COG0538 Icd, Isocitrate dehydrogenases Energy production and conversion 42783814 Pathogen - hypothetical protein BCE_4768 1 None None None 42779178 Common rplK 50S ribosomal protein L11 BCE_0097 248 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 42782142 Pathogen - hypothetical protein BCE_3086 1 None None None 42782484 Common - phenazine biosynthesis protein, PhzF family BCE_3431 123 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 42784161 Common - hypothetical protein BCE_5115 3 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 42781094 Pathogen - hypothetical protein BCE_2025 2 None None None 42783032 Common - hypothetical protein BCE_3984 56 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 42780961 Common - transporter, putative BCE_1892 160 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782075 Common - aldolase BCE_3019 69 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 42783217 Common - hydrolase, alpha/beta fold family, putative BCE_4171 21 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42779301 Common - glucose uptake protein BCE_0220 11 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 42782114 Pathogen - hypothetical protein BCE_3058 1 None None None 42783679 Common - aquaporin Z BCE_4633 121 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 42781316 Common - alcohol dehydrogenase, iron-containing BCE_2252 173 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 161511032 Common spoVG regulatory protein SpoVG BCE_0046 24 COG2088 SpoVG, Uncharacterized protein, involved in the regulation of septum location Cell envelope biogenesis, outer membrane 42779354 Common - hypothetical protein BCE_0273 13 COG0864 NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain Transcription 42784264 Pathogen - hypothetical protein BCE_5218 1 None None None 42780538 Common - hypothetical protein BCE_1464 9 None None None 42780511 Common - ABC transporter, ATP-binding protein BCE_1437 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 42784484 Pathogen - hypothetical protein BCE_5439 1 None None None 42784024 Pathogen - hypothetical protein BCE_4978 1 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 42784463 Common nuoK NADH dehydrogenase subunit K BCE_5418 104 COG0713 NuoK, NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) Energy production and conversion 42780594 Common leuA 2-isopropylmalate synthase BCE_1520 218 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 42781161 Common - hypothetical protein BCE_2095 3 COG0400 COG0400, Predicted esterase General function prediction only 42784032 Common - transcriptional regulator, AraC family BCE_4986 109 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 42784219 Common - DNA-binding response regulator BCE_5173 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42784092 Common sodC superoxide dismutase, Cu-Zn BCE_5046 87 COG2032 SodC, Cu/Zn superoxide dismutase Inorganic ion transport and metabolism 42781984 Pathogen - hypothetical protein BCE_2928 1 None None None 42780806 Common - MATE efflux family protein, putative BCE_1732 114 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 42782637 Common - hypothetical protein BCE_3587 6 COG2427 COG2427, Uncharacterized conserved protein Function unknown 42783450 Common holA DNA polymerase III subunit delta BCE_4404 121 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 42779128 Common gcaD UDP-N-acetylglucosamine pyrophosphorylase BCE_0047 238 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 42780296 Pathogen - hypothetical protein BCE_1221 1 None None None 42783101 Common comJ competence protein j BCE_4054 1 None None None 42779304 Common - molybdopterin biosynthesis protein, putative BCE_0223 71 COG1910 COG1910, Periplasmic molybdate-binding protein/domain Inorganic ion transport and metabolism 42780887 Common - hypothetical protein BCE_1816 1 None None None 42783634 Pathogen - hypothetical protein BCE_4588 1 None None None 42783989 Common - hypothetical protein BCE_4943 3 None None None 42782374 Pathogen - hypothetical protein BCE_3321 1 None None None 42782899 Common rbfA ribosome-binding factor A BCE_3849 199 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 42779791 Common - HIT family protein BCE_0713 26 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 42781247 Common - hypothetical protein BCE_2181 18 COG3874 COG3874, Uncharacterized conserved protein Function unknown 42782884 Pathogen - hypothetical protein BCE_3834 1 None None None 42784241 Common - hypothetical protein BCE_5195 7 COG1694 MazG, Predicted pyrophosphatase General function prediction only 42780465 Pathogen - conserved hypothetical protein, degenerate BCE_1391 1 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 42780616 Common lysA diaminopimelate decarboxylase BCE_1542 218 COG0019 LysA, Diaminopimelate decarboxylase Amino acid transport and metabolism 42780897 Common - hypothetical protein BCE_1827 2 None None None 42782452 Pathogen - hypothetical protein BCE_3399 1 None None None 42779544 Common - benzoate transport protein, putative BCE_0464 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782104 Common - hypothetical protein BCE_3048 3 None None None 42781959 Common - transposase, IS605 OrfB family BCE_2903 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42781246 Common - acetyltransferase, GNAT family protein BCE_2180 11 COG3393 COG3393, Predicted acetyltransferase General function prediction only 42783739 Common - CAAX amino terminal protease family protein BCE_4693 51 None None None 42782669 Common - serine protease BCE_3619 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 42779091 Common dacA D-alanyl-D-alanine carboxypeptidase BCE_0010 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42779317 Pathogen - hypothetical protein BCE_0236 1 None None None 42779573 Common - ABC transporter, ATP-binding protein BCE_0493 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 42783642 Common - hypothetical protein BCE_4596 24 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 42780939 Common - cardiolipin synthetase domain protein BCE_1869 152 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 42781931 Common dltD dltD protein BCE_2875 14 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 42783010 Common - penicillin-binding protein BCE_3962 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42781163 Pathogen - hypothetical protein BCE_2097 1 None None None 42780260 Common - hypothetical protein BCE_1185 113 COG2378 COG2378, Predicted transcriptional regulator Transcription 42780523 Common - sensor histidine kinase KinD BCE_1449 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42781923 Common - hypothetical protein BCE_2866 20 None None None 42779421 Common - isochorismatase family protein BCE_0340 108 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42781909 Common - hypothetical protein BCE_2852 1 None None None 42779723 Common - transporter, EamA family BCE_0645 128 COG2962 RarD, Predicted permeases General function prediction only 42782912 Common dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase BCE_3862 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 42784354 Pathogen - hypothetical protein BCE_5309 1 None None None 42779453 Common - hypothetical protein BCE_0372 3 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42779640 Common - UDP-glucose/GDP-mannose dehydrogenase family BCE_0560 207 COG0677 WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase Cell envelope biogenesis, outer membrane 42780739 Common pcnB tRNA CCA-pyrophosphorylase BCE_1665 211 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 42782846 Common - hypothetical protein BCE_3796 35 COG2509 COG2509, Uncharacterized FAD-dependent dehydrogenases General function prediction only 42781369 Common - hypothetical protein BCE_2305 1 None None None 42784679 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA BCE_5634 194 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 42780773 Common - hypothetical protein BCE_1699 43 COG2311 COG2311, Predicted membrane protein Function unknown 42782739 Common - hypothetical protein BCE_3689 9 None None None 42781651 Common - hypothetical protein BCE_2590 2 None None None 42783305 Common - stage III sporulation protein AH BCE_4259 4 None None None 42780883 Common - ABC transporter, substrate-binding protein, putative BCE_1812 146 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 42783320 Common - hypothetical protein BCE_4274 31 COG3872 COG3872, Predicted metal-dependent enzyme General function prediction only 42781955 Pathogen - hypothetical protein BCE_2899 1 None None None 42783506 Common - penicillin-binding protein BCE_4460 173 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42780830 Pathogen - hypothetical protein BCE_1757 1 None None None 42781222 Common - acetaldehyde dehydrogenase BCE_2156 37 COG4569 MhpF, Acetaldehyde dehydrogenase (acetylating) Secondary metabolites biosynthesis, transport, and catabolism 42783085 Pathogen - hypothetical protein BCE_4038 1 None None None 42780282 Pathogen - hypothetical protein BCE_1207 1 None None None 42783391 Common - 5-formyltetrahydrofolate cyclo-ligase family protein BCE_4345 58 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 42780708 Common - hypothetical protein BCE_1634 2 None None None 42781856 Pathogen - lipoprotein, putative BCE_2799 1 None None None 42783246 Common argD acetylornithine aminotransferase BCE_4200 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 42783286 Common - hypothetical protein BCE_4240 3 None None None 42779788 Common - amino acid ABC transporter, permease protein BCE_0710 177 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42784347 Common - hypothetical protein BCE_5302 148 COG1733 COG1733, Predicted transcriptional regulators Transcription 42784609 Common - ABC transporter, ATP-binding protein BCE_5564 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42779968 Common - peptide ABC transporter, permease protein BCE_0892 76 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42780361 Common clpB ATP-dependent Clp protease, ATP-binding subunit ClpB BCE_1287 218 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 42780866 Common - hypothetical protein BCE_1794 42 COG1378 COG1378, Predicted transcriptional regulators Transcription 42783994 Common - carbonic anhydrase, prokaryotic type, putative BCE_4948 32 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 42782703 Pathogen - hypothetical protein BCE_3653 1 None None None 42781938 Pathogen divIC cell division protein DivIC BCE_2882 1 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 42782244 Common - hypothetical protein BCE_3189 14 COG0288 CynT, Carbonic anhydrase Inorganic ion transport and metabolism 42783881 Common - hypothetical protein BCE_4835 8 COG4848 COG4848, Uncharacterized protein conserved in bacteria Function unknown 42780127 Common - hypothetical protein BCE_1051 18 None None None 42781290 Common - ABC transporter, ATP-binding protein BCE_2225 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42782011 Common - hypothetical protein BCE_2955 210 COG0628 PerM, Predicted permease General function prediction only 42783665 Pathogen - hypothetical protein BCE_4619 1 None None None 42780539 Common - acetyltransferase, GNAT family BCE_1465 22 COG0456 RimI, Acetyltransferases General function prediction only 42782858 Common - 2-oxoglutarate ferredoxin oxidoreductase subunit beta BCE_3808 110 COG1013 PorB, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit Energy production and conversion 42783730 Pathogen - hypothetical protein BCE_4684 1 None None None 42784646 Common - Rep-related protein BCE_5601 8 None None None 42782462 Common - putative translaldolase BCE_3409 159 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 42779377 Pathogen - hypothetical protein BCE_0296 1 None None None 42779631 Pathogen - hypothetical protein BCE_0551 1 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 42782113 Common argD acetylornithine aminotransferase BCE_3057 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 42779396 Common - hypothetical protein BCE_0315 2 None None None 42781282 Pathogen - hypothetical protein BCE_2217 1 None None None 42783166 Common - hydrolase, haloacid dehalogenase-like family BCE_4119 104 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42781393 Common - CoA-transferase, beta subunit BCE_2330 98 COG2057 AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Lipid metabolism 42782128 Pathogen - hypothetical protein BCE_3072 1 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 42783593 Pathogen - stage II sporulation protein B, putative BCE_4547 1 None None None 42782003 Common - hypothetical protein BCE_2947 2 None None None 42783674 Common - cytosine deaminase BCE_4628 66 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 42780142 Pathogen - hypothetical protein BCE_1066 1 None None None 42781796 Pathogen - hypothetical protein BCE_2739 1 None None None 42781415 Pathogen - hypothetical protein BCE_2352 1 None None None 42780914 Pathogen - hypothetical protein BCE_1844 1 None None None 42782051 Common tyrA prephenate dehydrogenase BCE_2995 157 COG0287 TyrA, Prephenate dehydrogenase Amino acid transport and metabolism 42780136 Common - spermine/spermidine acetyltransferase, putative BCE_1060 16 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783005 Common spoVE stage V sporulation protein E BCE_3957 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 42780390 Common - hypothetical protein BCE_1316 14 COG2761 FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 42782955 Common - protein phosphatase 2C, family protein BCE_3905 137 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 42782922 Common hslV ATP-dependent protease peptidase subunit BCE_3872 149 COG5405 HslV, ATP-dependent protease HslVU (ClpYQ), peptidase subunit Posttranslational modification, protein turnover, chaperones 42783238 Pathogen - hypothetical protein BCE_4192 1 None None None 42780902 Common - cation efflux family protein BCE_1832 192 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 42782136 Common - hypothetical protein BCE_3080 3 None None None 42781287 Common spoVS stage V sporulation protein S BCE_2222 24 COG2359 SpoVS, Uncharacterized protein conserved in bacteria Function unknown 42780258 Common - conserved hypothetical integral membrane protein, putative BCE_1183 2 None None None 42779718 Common - response regulator BCE_0640 224 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 42781225 Common - 4-oxalocrotonate tautomerase BCE_2159 7 COG1942 COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog General function prediction only 42779269 Pathogen - hypothetical protein BCE_0188 1 None None None 42784093 Common - hypothetical protein BCE_5047 2 None None None 42783421 Pathogen - hypothetical protein BCE_4375 1 None None None 42780934 Common - sensor histidine kinase, putative BCE_1864 127 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 42780252 Common - transcriptional regulator, TetR family BCE_1177 114 COG1309 AcrR, Transcriptional regulator Transcription 42779678 Common - hypothetical protein BCE_0598 92 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 42782318 Common - hypothetical protein BCE_3264 28 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 42781868 Common - cpsH domain protein BCE_2811 3 None None None 42783812 Common - hypothetical protein BCE_4766 2 None None None 42782600 Common - hypothetical protein BCE_3550 1 None None None 42783771 Common citZ methylcitrate synthase BCE_4725 194 COG0372 GltA, Citrate synthase Energy production and conversion 42780970 Common - sugar ABC transporter, permease protein BCE_1901 154 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 42783033 Pathogen - hypothetical protein BCE_3985 1 None None None 42784364 Common celC PTS system, cellobiose-specific IIA component BCE_5319 31 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 42781744 Common - hypothetical protein BCE_2686 9 None None None 42783951 Common - bacterial transferase family protein BCE_4905 184 COG0663 PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily General function prediction only 42782103 Common - glyoxalase family protein BCE_3047 17 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42783976 Common - hypothetical protein BCE_4930 38 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 42779856 Common gerLA spore germination protein GerLA BCE_0778 15 None None None 42779162 Common - negative regulator of genetic competence ClpC/MecB BCE_0081 233 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 42782595 Common - Bacterial extracellular solute-binding proteins, family 3 superfamily BCE_3545 158 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 42780805 Common - transcriptional regulator, MerR family BCE_1731 49 COG4978 COG4978, Transcriptional regulator, effector-binding domain/component Transcription / Signal transduction mechanisms 42781642 Common - transcriptional regulator, putative BCE_2581 11 COG4978 COG4978, Transcriptional regulator, effector-binding domain/component Transcription / Signal transduction mechanisms 42781819 Common - neutral protease BCE_2762 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 42781279 Common xylE D-xylose transporter XylE BCE_2214 126 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42781545 Pathogen - hypothetical protein BCE_2483 1 None None None 42782928 Common sucC succinyl-CoA synthetase subunit beta BCE_3878 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 42784180 Common - hypothetical protein BCE_5134 16 COG3641 PfoR, Predicted membrane protein, putative toxin regulator General function prediction only 42781257 Pathogen - hypothetical protein BCE_2191 1 None None None 42782205 Pathogen - hypothetical protein BCE_3150 1 None None None 42779688 Pathogen - hypothetical protein BCE_0608 1 None None None 42783788 Common - hypothetical protein BCE_4742 26 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 42782708 Common ureD urease accessory protein UreD BCE_3658 71 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 42779562 Common - PTS system, IIBC component BCE_0482 49 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 42780493 Common comC late competence protein comC BCE_1419 124 COG1989 PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 42783356 Pathogen - hypothetical protein BCE_4310 1 None None None 42784574 Common - ABC transporter, ATP-binding protein BCE_5529 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42781210 Common - hypothetical protein BCE_2144 44 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42783086 Common - EAL-domain protein BCE_4039 110 COG2200 Rtn, FOG: EAL domain Signal transduction mechanisms 42783740 Common - CAAX amino terminal protease family protein BCE_4694 30 None None None 42784680 Common trmE tRNA modification GTPase TrmE BCE_5635 229 COG0486 ThdF, Predicted GTPase General function prediction only 42780728 Common - hypothetical protein BCE_1654 13 COG4478 COG4478, Predicted membrane protein Function unknown 42781653 Common - transcriptional regulator, AraC family BCE_2592 38 COG2207 AraC, AraC-type DNA-binding domain-containing proteins Transcription 42783706 Common - bacitracin ABC transporter, ATP-binding protein BCE_4660 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42781402 Pathogen - hypothetical protein BCE_2339 1 None None None 42779486 Common - hypothetical protein BCE_0405 5 None None None 42781816 Common - bacitracin transport permease protein bcrc BCE_2759 44 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 42782299 Common - hypothetical protein BCE_3244 2 None None None 42783930 Common - sodium/hydrogen exchanger family protein BCE_4884 155 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42782454 Common - Integral membrane protein domain protein BCE_3401 93 COG2962 RarD, Predicted permeases General function prediction only 42783171 Common scpB segregation and condensation protein B BCE_4124 156 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 42782337 Common - D-3-phosphoglycerate dehydrogenase, putative BCE_3284 230 COG0111 SerA, Phosphoglycerate dehydrogenase and related dehydrogenases Amino acid transport and metabolism 42782495 Common - glycosyl transferase, group 2 family protein BCE_3442 107 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42782422 Common - hypothetical protein BCE_3369 10 None None None 42784249 Pathogen - hypothetical protein BCE_5203 7 None None None 42779898 Common - hypothetical protein BCE_0821 3 None None None 42779415 Common pcrA ATP-dependent DNA helicase PcrA BCE_0334 231 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 42781708 Common - hypothetical protein BCE_2649 7 None None None 42783529 Common - prespore-specific transcriptional regulator rsfA, putative BCE_4483 3 None None None 42781238 Common - serine/threonine phosphatase, putative BCE_2172 28 None None None 42782551 Pathogen - hypothetical protein BCE_3500 1 None None None 42780898 Common asnO asparagine synthetase, glutamine-hydrolyzing BCE_1828 170 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 42782228 Common - conserved hypothetical protein TIGR01655 subfamily BCE_3173 3 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42779858 Common gerLC spore germination protein GerLC BCE_0780 15 None None None 42782292 Pathogen - putative cytoplasmic protein BCE_3237 1 None None None 42783528 Common - recombination factor protein RarA BCE_4482 243 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 42783253 Common proC pyrroline-5-carboxylate reductase BCE_4207 216 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 42782502 Common - hypothetical protein BCE_3449 53 COG1695 COG1695, Predicted transcriptional regulators Transcription 42782629 Common moaD molybdopterin converting factor, subunit 1 BCE_3579 29 COG1977 MoaD, Molybdopterin converting factor, small subunit Coenzyme metabolism 42782689 Common sspP acid-soluble spore protein P BCE_3639 2 None None None 42779438 Common - multidrug resistance protein, Smr family BCE_0357 146 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 42784048 Common - pyridoxal phosphate-dependent enzyme, putative BCE_5002 60 COG1921 SelA, Selenocysteine synthase [seryl-tRNASer selenium transferase] Amino acid transport and metabolism 42783415 Common - conserved hypothetical protein TIGR00486 BCE_4369 104 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 42784523 Common uvsE putative UV damage endonuclease BCE_5478 24 COG4294 Uve, UV damage repair endonuclease DNA replication, recombination, and repair 42782059 Common - hypothetical protein BCE_3003 1 None None None 42782959 Common def peptide deformylase BCE_3910 213 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 42779499 Common - hypothetical protein BCE_0418 8 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42782879 Pathogen - hypothetical protein BCE_3829 1 None None None 42779771 Common - norQ protein, putative BCE_0693 151 COG0714 COG0714, MoxR-like ATPases General function prediction only 42779997 Common - acetyltransferase BCE_0921 61 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 42784477 Common atpA F0F1 ATP synthase subunit alpha BCE_5432 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 42783390 Common - hypothetical protein BCE_4344 8 COG4483 COG4483, Uncharacterized protein conserved in bacteria Function unknown 42780563 Pathogen - hypothetical protein BCE_1489 1 None None None 42781613 Common - enoyl-CoA hydratase BCE_2552 177 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 42782682 Common - ahpC/TSA family protein BCE_3632 187 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 42780844 Common - hypothetical protein BCE_1771 2 COG3144 FliK, Flagellar hook-length control protein Cell motility and secretion 42784392 Pathogen - hypothetical protein BCE_5347 1 None None None 42782693 Common - alanyl-tRNA synthetase family protein BCE_3643 242 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42783295 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase BCE_4249 228 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 42782559 Common - hypothetical protein BCE_3508 3 None None None 42782616 Common - inosine-uridine preferring nucleoside hydrolase family protein BCE_3566 85 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 42781829 Pathogen - hypothetical protein BCE_2772 1 None None None 42783220 Common - acetyltransferase, GNAT family BCE_4174 7 COG0456 RimI, Acetyltransferases General function prediction only 42781557 Common - PTS system, cellobiose-specific IIB component, putative BCE_2495 28 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 42783289 Common spo0A stage 0 sporulation protein A BCE_4243 222 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 42784570 Common - hydrolase, haloacid dehalogenase-like family BCE_5525 139 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42779257 Common - Tn7-like transposition protein C BCE_0176 19 None None None 42779139 Common divIC cell division protein DivIC BCE_0058 5 COG2919 COG2919, Septum formation initiator Cell division and chromosome partitioning 42784074 Common glgB glycogen branching enzyme BCE_5028 150 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 42781769 Common bltD spermine/spermidine acetyltransferase BCE_2712 19 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782570 Pathogen - hypothetical protein BCE_3519 1 None None None 42781135 Pathogen - hypothetical protein BCE_2069 1 None None None 42781504 Common - membrane protein, MmpL family BCE_2442 48 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 42782289 Pathogen - lipoprotein, putative BCE_3234 1 None None None 42781063 Common brnQ branched-chain amino acid transport system II carrier protein BCE_1994 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42781219 Common - endoribonuclease L-PSP, putative BCE_2153 103 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 42781523 Common - hypothetical protein BCE_2461 2 None None None 42781960 Common - transporter, putative BCE_2904 193 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42783384 Common - isochorismatase family protein BCE_4338 62 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42779462 Pathogen - hypothetical protein BCE_0381 1 None None None 42783462 Common - GTPase family protein BCE_4416 41 COG1161 COG1161, Predicted GTPases General function prediction only 42781643 Common - permease, putative BCE_2582 165 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782876 Common - lipoprotein, Bmp family BCE_3826 105 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 42784620 Pathogen - hypothetical protein BCE_5575 1 None None None 42779947 Common - hypothetical protein BCE_0871 40 COG2210 COG2210, Uncharacterized conserved protein Function unknown 42784555 Common - iron compound ABC transporter, ATP-binding protein BCE_5510 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 42783910 Common moeA molybdopterin biosynthesis protein MoeA BCE_4864 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 42780378 Common - oligopeptide ABC transporter, ATP-binding protein BCE_1304 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 42780128 Common - dihydroxyacetone kinase family protein BCE_1052 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 42783660 Pathogen - hypothetical protein BCE_4614 1 None None None 42779145 Common - pantothenate kinase BCE_0064 136 COG1521 COG1521, Putative transcriptional regulator, homolog of Bvg accessory factor Transcription 42781514 Common - acetyltransferase, GNAT family BCE_2452 143 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42781804 Common - hydrolase, haloacid dehalogenase-like family BCE_2747 124 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 42781681 Common - permease, putative domain protein BCE_2622 17 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 42779202 Common rplX 50S ribosomal protein L24 BCE_0121 215 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 42779259 Common - Tn7-like transposition protein D BCE_0178 16 None None None 42782188 Common - acetyltransferase, GNAT family BCE_3133 17 COG0456 RimI, Acetyltransferases General function prediction only 42783480 Pathogen - hypothetical protein BCE_4434 1 None None None 42781137 Pathogen - hypothetical protein BCE_2071 1 None None None 42783861 Pathogen - 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase BCE_4815 1 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 42779715 Common - hypothetical protein BCE_0636 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 42782443 Common - hypothetical protein BCE_3390 23 COG4843 COG4843, Uncharacterized protein conserved in bacteria Function unknown 42779233 Pathogen - hypothetical protein BCE_0152 1 None None None 42779973 Common cotJA cotJA protein BCE_0897 2 None None None 42779986 Common - germination protein gerN BCE_0910 197 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42782727 Common hutG formimidoylglutamase BCE_3677 160 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 42780613 Pathogen - hypothetical protein BCE_1539 1 None None None 42784087 Common - transcriptional regulator, AsnC family BCE_5041 27 COG1522 Lrp, Transcriptional regulators Transcription 42780270 Common - S-layer protein, putative BCE_1195 19 COG5386 COG5386, Cell surface protein Cell envelope biogenesis, outer membrane 42781113 Common - O-methyltransferase, putative BCE_2045 104 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 42784569 Common - xanthine/uracil permease family protein BCE_5524 76 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 42784634 Pathogen - hypothetical protein BCE_5589 1 None None None 42779164 Common - DNA-binding protein, putative BCE_0083 30 COG1623 COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) General function prediction only 42780977 Common - glucokinase, putative BCE_1908 137 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 42781333 Common acpD azoreductase BCE_2269 98 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 42782264 Common - glyoxalase family protein BCE_3209 27 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42781364 Common - transcriptional regulator, AsnC family BCE_2300 146 COG1522 Lrp, Transcriptional regulators Transcription 42781993 Pathogen - lipoprotein, putative BCE_2937 1 None None None 42783756 Common dnaB DNA replication protein DnaB BCE_4710 16 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 42784188 Common - acyl-CoA dehydrogenase BCE_5142 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 42780165 Common - methyltransferase, CheR family BCE_1089 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 42782622 Common - squalene-hopene cyclase BCE_3572 40 COG1657 SqhC, Squalene cyclase Lipid metabolism 42780281 Common - cell wall-associated protein, putative BCE_1206 71 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 42781149 Common - hypothetical protein BCE_2083 1 None None None 42784324 Common - DNA-binding protein BCE_5278 70 COG1476 COG1476, Predicted transcriptional regulators Transcription 42783123 Common - acetyl-CoA acetyltransferase BCE_4076 168 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 42784111 Common - pyridine nucleotide-disulphide oxidoreductase BCE_5065 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 42779960 Common celB PTS system, cellobiose-specific IIC component BCE_0884 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 42779484 Common - phage head-tail adaptor, putative BCE_0403 5 COG5614 COG5614, Bacteriophage head-tail adaptor General function prediction only 42781867 Common - mutT/nudix family protein BCE_2810 15 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42784664 Common - replicative DNA helicase BCE_5619 192 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 42780763 Common - hypothetical protein BCE_1689 21 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 42779976 Common - hypothetical protein BCE_0900 63 COG1273 COG1273, Uncharacterized conserved protein Function unknown 42779133 Common spoVT stage V sporulation protein T BCE_0052 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 42781425 Common gerPF spore germination protein GerPF BCE_2362 2 None None None 42784454 Common - ABC transporter, ATP-binding protein BCE_5409 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42784639 Common guaC guanosine 5'-monophosphate oxidoreductase BCE_5594 233 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 42780622 Pathogen - hypothetical protein BCE_1548 1 None None None 42781173 Common ogt methylated-DNA--protein-cysteine S-methyltransferase BCE_2107 218 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 42780836 Common flgB flagellar basal body rod protein FlgB BCE_1763 53 COG1815 FlgB, Flagellar basal body protein Cell motility and secretion 42784198 Common - hypothetical protein BCE_5152 24 COG1378 COG1378, Predicted transcriptional regulators Transcription 42784562 Common - putative heme peroxidase BCE_5517 36 COG3253 COG3253, Uncharacterized conserved protein Function unknown 42779876 Common tenI transcriptional regulator TenI BCE_0799 184 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 42783780 Common - malate dehydrogenase, putative BCE_4734 201 COG0281 SfcA, Malic enzyme Energy production and conversion 42783900 Pathogen - hypothetical protein BCE_4854 1 None None None 42780051 Common - alginate O-acetyltransferase, putative BCE_0975 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 42780994 Common - hypothetical protein BCE_1925 7 None None None 42781458 Pathogen - hypothetical protein BCE_2395 1 None None None 42781025 Common - DNA-binding response regulator BCE_1956 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42783139 Common - AzlC family protein BCE_4092 110 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 42784147 Common - hypothetical protein BCE_5101 2 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 42779217 Common rpsK 30S ribosomal protein S11 BCE_0136 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 42780600 Common hisD histidinol dehydrogenase BCE_1526 214 COG0141 HisD, Histidinol dehydrogenase Amino acid transport and metabolism 42779442 Pathogen - hypothetical protein BCE_0361 1 None None None 42781783 Common - endoribonuclease L-PSP, putative BCE_2726 165 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 42783190 Common spoIIAA anti-sigma F factor antagonist BCE_4144 64 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 42780767 Common - thermostable carboxypeptidase 1 BCE_1693 82 COG2317 COG2317, Zn-dependent carboxypeptidase Amino acid transport and metabolism 42784519 Common - 3-hydroxybutyryl-CoA dehydrogenase BCE_5474 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 42784409 Common - helicase, putative BCE_5364 144 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 42781967 Common - acetyltransferase, GNAT family BCE_2911 4 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 42780215 Pathogen - hypothetical protein BCE_1140 1 None None None 42780350 Pathogen - hypothetical protein BCE_1276 1 None None None 42784129 Common - CAAX amino terminal protease family protein BCE_5083 22 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 42779617 Common - hypothetical protein BCE_0537 9 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 42780288 Common - HD domain protein BCE_1213 66 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 42781578 Common - hypothetical protein BCE_2516 35 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42783657 Common - hypothetical protein BCE_4611 2 None None None 42783844 Common - RNA polymerase sigma-70 factor, ECF subfamily BCE_4798 145 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42783542 Common secDF bifunctional preprotein translocase subunit SecD/SecF BCE_4496 220 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 42784559 Common - hypothetical protein BCE_5514 3 None None None 42779509 Pathogen - hypothetical protein BCE_0428 1 COG1637 COG1637, Predicted nuclease of the RecB family DNA replication, recombination, and repair 42780949 Common asnA asparagine synthetase AsnA BCE_1880 31 COG2502 AsnA, Asparagine synthetase A Amino acid transport and metabolism 42779151 Common folP dihydropteroate synthase BCE_0070 218 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 42784295 Common spoVAC stage V sporulation protein AC BCE_5249 15 None None None 42784588 Common - GGDEF domain protein BCE_5543 177 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 42784652 Common - modification methylase, putative BCE_5607 30 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 42780242 Common hemE uroporphyrinogen decarboxylase BCE_1167 181 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 42782487 Common - acetyltransferase, GNAT family BCE_3434 74 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42779929 Common spoVR stage V sporulation protein R BCE_0853 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 42781451 Common - hypothetical protein BCE_2388 3 None None None 42779746 Common - hypothetical protein BCE_0668 33 COG0398 COG0398, Uncharacterized conserved protein Function unknown 42782764 Common - ABC transporter, ATP-binding/permease protein BCE_3714 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42784286 Common tpiA triosephosphate isomerase BCE_5240 218 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 42781603 Pathogen - hypothetical protein BCE_2542 1 None None None 42779877 Common goxB glycine oxidase BCE_0800 165 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 42782437 Common - conserved hypothetical protein TIGR00104 BCE_3384 96 COG1720 COG1720, Uncharacterized conserved protein Function unknown 42784353 Common ugd UDP-glucose 6-dehydrogenase BCE_5308 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 42781297 Common - hypothetical protein BCE_2232 3 COG3011 COG3011, Uncharacterized protein conserved in bacteria Function unknown 42779221 Common - ABC transporter, ATP-binding protein BCE_0140 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 42782200 Common adhB alcohol dehydrogenase, zinc-containing BCE_3145 205 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 42782258 Common - thiJ/pfpI family protein BCE_3203 119 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 42780322 Common gerPE spore germination protein GerPE BCE_1248 2 None None None 42783536 Common dtD D-tyrosyl-tRNA deacylase BCE_4490 139 COG1490 Dtd, D-Tyr-tRNAtyr deacylase Translation, ribosomal structure and biogenesis 42781240 Common - acetyltransferase, GNAT family BCE_2174 69 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42781430 Pathogen - hypothetical protein BCE_2367 1 None None None 42783115 Common - hypothetical protein BCE_4068 180 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42783579 Common - sporulation initiation phosphotransferase, putative BCE_4533 3 None None None 42783942 Common - transcriptional regulators, AcrR family BCE_4896 19 COG1309 AcrR, Transcriptional regulator Transcription 42782001 Common - transcriptional regulator, GntR family BCE_2945 48 COG1725 COG1725, Predicted transcriptional regulators Transcription 42779475 Common - hypothetical protein BCE_0394 13 None None None 42782545 Common - hypothetical protein BCE_3494 1 None None None 42781006 Common ilvD dihydroxy-acid dehydratase BCE_1937 210 COG0129 IlvD, Dihydroxyacid dehydratase/phosphogluconate dehydratase Amino acid transport and metabolism / Carbohydrate transport and metabolism 42779371 Common - chaperonin family protein BCE_0290 231 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 42783363 Pathogen - hypothetical protein BCE_4317 1 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 42784233 Common - sodium/hydrogen exchanger family protein BCE_5187 188 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42780435 Common trpB tryptophan synthase subunit beta BCE_1361 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 42779123 Common sspF small, acid-soluble spore protein BCE_0042 10 None None None 42784240 Common - decarboxylase family protein BCE_5194 117 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 42783118 Pathogen - lipoprotein, putative BCE_4071 1 None None None 42782271 Common - hypothetical protein BCE_3216 27 COG3339 COG3339, Uncharacterized conserved protein Function unknown 42780570 Common - aminoglycoside phophotransferase family protein BCE_1496 15 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42782550 Common - MutS family protein, putative BCE_3499 206 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 42783794 Common pepQ proline dipeptidase BCE_4748 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 42780827 Common cheR chemotaxis protein methyltransferase CheR BCE_1754 151 COG1352 CheR, Methylase of chemotaxis methyl-accepting proteins Cell motility and secretion / Signal transduction mechanisms 42781303 Pathogen - hypothetical protein BCE_2238 1 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 42783725 Common - hypothetical protein BCE_4679 93 COG1796 POL4, DNA polymerase IV (family X) DNA replication, recombination, and repair 42779273 Common - hypothetical protein BCE_0192 13 None None None 42782544 Common - hypothetical protein BCE_3493 1 None None None 42781193 Common - hypothetical protein BCE_2127 10 COG2839 COG2839, Uncharacterized protein conserved in bacteria Function unknown 42782745 Common ccdA cytochrome c-type biogenesis protein CcdA BCE_3695 73 COG0785 CcdA, Cytochrome c biogenesis protein Posttranslational modification, protein turnover, chaperones 42780026 Common - hypothetical protein BCE_0950 6 None None None 42779224 Common rplM 50S ribosomal protein L13 BCE_0143 232 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 42782803 Common chi36 extracellular exochitinase Chi36 BCE_3753 24 COG3469 COG3469, Chitinase Carbohydrate transport and metabolism 42781355 Common - mechanosensitive ion channel family protein BCE_2291 102 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 42784220 Common - sensor histidine kinase BCE_5174 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42781838 Common sleB spore cortex-lytic enzyme prepeptide BCE_2781 56 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 42779505 Pathogen - hypothetical protein BCE_0424 2 None None None 42780001 Common - sugE protein, putative BCE_0925 107 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 42783093 Common - lipoprotein, putative BCE_4046 40 None None None 42784485 Common upp uracil phosphoribosyltransferase BCE_5440 165 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 42782838 Common - hypothetical protein BCE_3788 52 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 42780718 Common aroB 3-dehydroquinate synthase BCE_1644 209 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 42784465 Common nuoI NADH dehydrogenase subunit I BCE_5420 192 COG1143 NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) Energy production and conversion 42781528 Common - hypothetical protein BCE_2466 11 COG4927 COG4927, Predicted choloylglycine hydrolase General function prediction only 42783908 Common moaE molybdopterin converting factor, subunit 2 BCE_4862 161 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 42780344 Common - alpha-amylase family protein BCE_1270 146 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 42783103 Pathogen - hypothetical protein BCE_4056 1 None None None 42784416 Common - hypothetical protein BCE_5371 2 None None None 42782567 Common - hypothetical protein BCE_3516 61 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 42782092 Common - fatty acid desaturase BCE_3036 37 COG3239 DesA, Fatty acid desaturase Lipid metabolism 42783689 Common sdhB succinate dehydrogenase iron-sulfur subunit BCE_4643 207 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 42780893 Common - phosphoglycerate mutase family protein BCE_1822 20 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42781551 Pathogen - hypothetical protein BCE_2489 1 None None None 42782968 Common - lipoprotein, putative BCE_3920 5 COG3755 COG3755, Uncharacterized protein conserved in bacteria Function unknown 42782824 Common alkA DNA-3-methyladenine glycosidase BCE_3774 121 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 42781474 Common - sodium/alanine symporter family protein BCE_2411 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 42780787 Common - transporter, EamA family BCE_1713 149 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 42783602 Common - hemX protein BCE_4556 29 COG0755 CcmC, ABC-type transport system involved in cytochrome c biogenesis, permease component Posttranslational modification, protein turnover, chaperones 42780042 Common - collagen adhesin domain protein BCE_0966 11 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 42783813 Pathogen - hypothetical protein BCE_4767 1 None None None 42782342 Common - erythromycin esterase, putative BCE_3289 33 COG2312 COG2312, Erythromycin esterase homolog General function prediction only 42782881 Common - hypothetical protein BCE_3831 13 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 42783053 Common - inositol monophosphatase family protein BCE_4005 202 COG0483 SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family Carbohydrate transport and metabolism 42779658 Common - yfhS protein BCE_0578 3 None None None 42782801 Common gabP GABA permease BCE_3751 165 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 161511021 Common recO DNA repair protein RecO BCE_4378 73 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 42779529 Pathogen - hypothetical protein BCE_0448 1 None None None 42780595 Common leuB 3-isopropylmalate dehydrogenase BCE_1521 222 COG0473 LeuB, Isocitrate/isopropylmalate dehydrogenase Amino acid transport and metabolism 42783864 Common - hypothetical protein BCE_4818 6 COG4768 COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain General function prediction only 42780941 Common aspA aspartate ammonia-lyase BCE_1872 239 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 42783429 Common - hypothetical protein BCE_4383 147 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 42780988 Common cysK cysteine synthase A BCE_1919 225 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 42779093 Common - glutamine amidotransferase, SNO family BCE_0012 85 COG0311 PDX2, Predicted glutamine amidotransferase involved in pyridoxine biosynthesis Coenzyme metabolism 42782752 Common - als operon regulatory protein AlsR, putative BCE_3702 193 COG0583 LysR, Transcriptional regulator Transcription 42779447 Pathogen - hypothetical protein BCE_0366 1 None None None 42779866 Pathogen - hypothetical protein BCE_0789 1 None None None 42782973 Common - hypothetical protein BCE_3925 14 COG1593 DctQ, TRAP-type C4-dicarboxylate transport system, large permease component Carbohydrate transport and metabolism 42779697 Common - SPFH domain/band 7 family protein BCE_0618 42 COG2268 COG2268, Uncharacterized protein conserved in bacteria Function unknown 42783225 Common ribD riboflavin biosynthesis protein RibD BCE_4179 233 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 42779539 Pathogen - hypothetical protein BCE_0459 1 None None None 42781212 Common - SPFH domain/Band 7 family protein BCE_2146 222 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 42780615 Pathogen - hypothetical protein BCE_1541 1 None None None 42782360 Common - hydrolase, alpha/beta fold family BCE_3307 195 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42784251 Common - hypothetical protein BCE_5205 3 None None None 42782099 Common - histidine kinase domain protein BCE_3043 13 COG2972 COG2972, Predicted signal transduction protein with a C-terminal ATPase domain Signal transduction mechanisms 42783074 Common - potassium uptake protein, TrkA family BCE_4027 155 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 42781147 Common - multidrug resistance protein, putative BCE_2081 117 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780104 Common - replicative DNA helicase BCE_1028 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 42780116 Pathogen - conserved hypothetical protein subfamily, putative BCE_1040 1 None None None 42780507 Pathogen - hypothetical protein BCE_1433 1 None None None 42780789 Common - lacX protein, putative BCE_1715 43 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 42784663 Common - replicative DNA helicase BCE_5618 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 42780121 Common - transcriptional regulator, MarR family BCE_1045 15 COG1846 MarR, Transcriptional regulators Transcription 42780714 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase BCE_1640 225 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42782964 Common - hypothetical protein BCE_3916 137 COG1561 COG1561, Uncharacterized stress-induced protein Function unknown 42783939 Common - hypothetical protein BCE_4893 29 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 42781427 Pathogen - hypothetical protein BCE_2364 1 None None None 42783457 Common - iojap-related protein BCE_4411 193 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 42780076 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_1000 201 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 42779831 Common - DNA-binding protein BCE_0753 66 COG1476 COG1476, Predicted transcriptional regulators Transcription 42783534 Pathogen - hypothetical protein BCE_4488 1 None None None 42783041 Common ctaA cytochrome aa3 controlling protein BCE_3993 59 COG1612 CtaA, Uncharacterized protein required for cytochrome oxidase assembly Posttranslational modification, protein turnover, chaperones 42783628 Pathogen - hypothetical protein BCE_4582 1 None None None 42782186 Common - hypothetical protein BCE_3131 22 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 42783778 Common accD acetyl-CoA carboxylase subunit beta BCE_4732 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 42780967 Common - fis-type helix-turn-helix domain protein BCE_1898 29 COG2508 COG2508, Regulator of polyketide synthase expression Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism 42784192 Common - hypothetical protein BCE_5146 2 None None None 42783040 Common - protoheme IX farnesyltransferase BCE_3992 173 COG0109 CyoE, Polyprenyltransferase (cytochrome oxidase assembly factor) Posttranslational modification, protein turnover, chaperones 42783769 Common mdh malate dehydrogenase BCE_4723 175 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 42780153 Pathogen - hypothetical protein BCE_1077 1 None None None 42784005 Common - hypothetical protein BCE_4959 2 None None None 42782991 Common - ylmG protein BCE_3943 91 COG0762 COG0762, Predicted integral membrane protein Function unknown 42783680 Common - rrf2 family protein BCE_4634 64 COG1959 COG1959, Predicted transcriptional regulator Transcription 42781901 Common - hypothetical protein BCE_2844 5 None None None 42782674 Common - hypothetical protein BCE_3624 170 COG0344 COG0344, Predicted membrane protein Function unknown 42783586 Common minD septum site-determining protein MinD BCE_4540 197 COG2894 MinD, Septum formation inhibitor-activating ATPase Cell division and chromosome partitioning 42784666 Common - DHH subfamily 1 protein BCE_5621 88 COG3887 COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain Signal transduction mechanisms 42783125 Pathogen - hypothetical protein BCE_4078 1 None None None 42783791 Pathogen - hypothetical protein BCE_4745 1 None None None 42784132 Common - nifU domain protein BCE_5086 108 COG0694 COG0694, Thioredoxin-like proteins and domains Posttranslational modification, protein turnover, chaperones 42781498 Pathogen - hypothetical protein BCE_2436 1 None None None 42783072 Common - hypothetical protein BCE_4025 11 COG5503 COG5503, Uncharacterized conserved small protein Function unknown 42784178 Pathogen - lipoprotein, putative BCE_5132 1 None None None 42781378 Common - glycine betaine/L-proline ABC transporter, permease protein, putative BCE_2314 151 COG1732 OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) Cell envelope biogenesis, outer membrane 42783019 Common - hypothetical protein BCE_3971 24 COG1323 COG1323, Predicted nucleotidyltransferase General function prediction only 42780586 Pathogen - hypothetical protein BCE_1512 1 None None None 42781493 Pathogen - lipoprotein, putative BCE_2431 1 None None None 42782088 Common rocB RocB protein BCE_3032 36 COG4187 RocB, Arginine degradation protein (predicted deacylase) Amino acid transport and metabolism 42780980 Common - drug resistance transporter, EmrB/QacA family BCE_1911 221 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781341 Common - hypothetical protein BCE_2277 128 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 42783535 Common - hypothetical protein BCE_4489 42 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42780023 Common - amino acid ABC transporter, ATP-binding protein BCE_0947 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 42783876 Common murC UDP-N-acetylmuramate--L-alanine ligase BCE_4830 211 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 42783967 Common - hypothetical protein BCE_4921 3 COG4918 COG4918, Uncharacterized protein conserved in bacteria Function unknown 42779664 Common - lipoprotein, putative BCE_0584 24 COG4129 COG4129, Predicted membrane protein Function unknown 42781123 Common - lipoprotein, putative BCE_2055 11 None None None 42782977 Common pyrD dihydroorotate dehydrogenase 1B BCE_3929 240 COG0167 PyrD, Dihydroorotate dehydrogenase Nucleotide transport and metabolism 42779588 Common - type I phosphodiesterase/nucleotide pyrophosphatase family protein BCE_0508 41 COG1524 COG1524, Uncharacterized proteins of the AP superfamily General function prediction only 42780135 Common - CAAX amino terminal protease family protein BCE_1059 24 None None None 42782930 Common rbgA ribosomal biogenesis GTPase BCE_3880 143 COG1161 COG1161, Predicted GTPases General function prediction only 42783696 Common etfB electron transfer flavoprotein, beta subunit BCE_4650 153 COG2086 FixA, Electron transfer flavoprotein, beta subunit Energy production and conversion 42782485 Pathogen - acetyltransferase, GNAT family BCE_3432 1 None None None 42783206 Common - transcriptional regulator, Fur family BCE_4160 202 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 42779565 Common topB DNA topoisomerase III BCE_0485 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 42780631 Common - Na+/H+ antiporter family protein BCE_1557 73 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 42781462 Common dhbC isochorismate synthase DhbC BCE_2399 221 COG1169 MenF, Isochorismate synthase Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42783299 Common xseA exodeoxyribonuclease VII large subunit BCE_4253 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 42783315 Pathogen - hypothetical protein BCE_4269 1 None None None 42780677 Common - ATP:cob(I)alamin adenosyltransferase, putative BCE_1603 131 COG2096 COG2096, Uncharacterized conserved protein Function unknown 42780860 Common fliQ flagellar biosynthesis protein FliQ BCE_1787 10 COG1987 FliQ, Flagellar biosynthesis pathway, component FliQ Cell motility and secretion / Intracellular trafficking and secretion 42781535 Common - hypothetical protein BCE_2473 25 COG3506 COG3506, Uncharacterized conserved protein Function unknown 42780213 Common - hypothetical protein BCE_1138 20 COG0433 COG0433, Predicted ATPase General function prediction only 42781563 Common - acetyltransferase, GNAT family BCE_2501 138 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 42781363 Common - DJ-1/PfpI family BCE_2299 136 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 42779581 Pathogen - hypothetical protein BCE_0501 1 None None None 42779194 Common rplB 50S ribosomal protein L2 BCE_0113 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 42782712 Common ureC urease subunit alpha BCE_3662 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 42783376 Pathogen - hypothetical protein BCE_4330 1 None None None 42784546 Common - multidrug resistance protein, putative BCE_5501 148 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780910 Common nhaC Na+/H+ antiporter NhaC BCE_1840 67 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 42780517 Pathogen - hypothetical protein BCE_1443 1 None None None 42779487 Common - phage major tail protein, phi13 family subfamily BCE_0406 8 None None None 42782389 Common - IS240 transposase BCE_3336 45 COG3316 COG3316, Transposase and inactivated derivatives DNA replication, recombination, and repair 42783596 Common - hypothetical protein BCE_4550 4 None None None 42782906 Common - DNA polymerase III, alpha subunit, Gram-positive type BCE_3856 153 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 42779286 Common - oligopeptide ABC transporter, permease protein BCE_0205 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42779593 Common - tellurium resistance protein, putative BCE_0513 29 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 42780428 Pathogen - hypothetical protein BCE_1354 1 None None None 42781155 Pathogen - hypothetical protein BCE_2089 1 None None None 42781891 Common - acetyltransferase, GNAT family BCE_2834 30 COG0456 RimI, Acetyltransferases General function prediction only 42782076 Pathogen - acetyltransferase, GNAT family BCE_3020 3 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782222 Pathogen - hypothetical protein BCE_3167 1 None None None 42781881 Common - chitin binding protein, putative BCE_2824 65 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 42782030 Common - hypothetical protein BCE_2974 2 None None None 42781831 Pathogen - hypothetical protein BCE_2774 1 None None None 42784016 Common - LPXTG-site transpeptidase family protein BCE_4970 27 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 42780698 Pathogen - hypothetical protein BCE_1624 1 None None None 42780458 Common - hypothetical protein BCE_1384 1 None None None 42781095 Common - glycosyl transferase, group 2 family protein BCE_2026 174 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42780256 Pathogen - hypothetical protein BCE_1181 1 None None None 42782064 Pathogen - hypothetical protein BCE_3008 1 None None None 42779292 Common - transcriptional regulator, AraC family BCE_0211 28 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 42779270 Pathogen - hypothetical protein BCE_0189 1 None None None 42782866 Common pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BCE_3816 205 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 42779409 Common purD phosphoribosylamine--glycine ligase BCE_0328 235 COG0151 PurD, Phosphoribosylamine-glycine ligase Nucleotide transport and metabolism 42779417 Common - lipoprotein, putative BCE_0336 9 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 42782829 Common - hydrolase, alpha/beta fold family BCE_3779 65 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42784162 Common - hypothetical protein BCE_5116 187 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 42784644 Pathogen - hypothetical protein BCE_5599 1 None None None 42781070 Common - rrf2 family protein BCE_2001 59 COG1959 COG1959, Predicted transcriptional regulator Transcription 42782262 Common - arsenate reductase ArsC BCE_3207 144 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 42780424 Common - hypothetical protein BCE_1350 136 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42779520 Common ahpF alkyl hydroperoxide reductase, F subunit BCE_0439 246 COG3634 AhpF, Alkyl hydroperoxide reductase, large subunit Posttranslational modification, protein turnover, chaperones 42780342 Common - Helix-turn-helix domain protein BCE_1268 7 COG3339 COG3339, Uncharacterized conserved protein Function unknown 42781315 Common - hypothetical protein BCE_2251 38 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 42781688 Common tenA transcriptional activator TenA BCE_2629 78 COG0819 TenA, Putative transcription activator Transcription 42780141 Pathogen - hypothetical protein BCE_1065 1 None None None 42784542 Common - membrane protein PfoR BCE_5497 10 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 42781753 Common - IS231-related transposase BCE_2695 15 COG5421 COG5421, Transposase DNA replication, recombination, and repair 42784440 Common - caspsular polysaccharide biosynthesis protein BCE_5395 197 COG1086 COG1086, Predicted nucleoside-diphosphate sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42781849 Pathogen - hypothetical protein BCE_2792 1 None None None 42779618 Common - hypothetical protein BCE_0538 1 None None None 42779624 Pathogen - hypothetical protein BCE_0544 1 None None None 42780864 Common flgG flagellar basal body rod protein FlgG BCE_1792 125 COG4786 FlgG, Flagellar basal body rod protein Cell motility and secretion 42780669 Common spmA spore maturation protein A BCE_1595 39 COG2715 SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. General function prediction only 42780922 Common - thioredoxin family protein BCE_1852 191 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 42779170 Common cysS cysteinyl-tRNA synthetase BCE_0089 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42784242 Common - ferritin BCE_5196 84 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 42779556 Pathogen - hypothetical protein BCE_0476 1 None None None 42781998 Common - ccdc protein BCE_2942 6 COG4846 CcdC, Membrane protein involved in cytochrome C biogenesis Posttranslational modification, protein turnover, chaperones 42784031 Common - ABC transporter, ATP-binding protein BCE_4985 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42780908 Common - hypothetical protein BCE_1838 17 COG3689 COG3689, Predicted membrane protein Function unknown 42783738 Common - HD domain protein BCE_4692 3 None None None 42781928 Common - dedA family protein BCE_2872 167 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 42783733 Common pheS phenylalanyl-tRNA synthetase subunit alpha BCE_4687 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 42782704 Common - acetyltransferase, GNAT family protein BCE_3654 8 None None None 42783354 Pathogen - hypothetical protein BCE_4308 1 None None None 42784023 Pathogen - hypothetical protein BCE_4977 1 None None None 42780388 Common pepF oligoendopeptidase F BCE_1314 88 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42781158 Common dpS general stress protein BCE_2092 144 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 42781183 Common - dedA family protein BCE_2117 157 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 42781547 Pathogen - hypothetical protein BCE_2485 1 None None None 42782039 Common - hypothetical protein BCE_2983 39 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 42782584 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha BCE_3533 214 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 42780297 Pathogen - hypothetical protein BCE_1222 1 None None None 42781676 Common - DNA-binding response regulator BCE_2617 214 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42783189 Common spoIIAB anti-sigma F factor BCE_4143 29 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 42782016 Common - sulfonate ABC transporter, sulfonate-binding protein, putative BCE_2960 124 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 42780774 Pathogen - hypothetical protein BCE_1700 1 None None None 42779792 Common - RNA polymerase sigma factor BCE_0714 96 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42784263 Common ccrB camphor resistance protein CrcB BCE_5217 176 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 42782375 Common - hypothetical protein BCE_3322 16 COG4720 COG4720, Predicted membrane protein Function unknown 42779129 Common prs ribose-phosphate pyrophosphokinase BCE_0048 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 42781223 Common - 4-hydroxy-2-ketovalerate aldolase BCE_2157 206 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 42779325 Pathogen - hypothetical protein BCE_0244 1 None None None 161511031 Common - geranylgeranylglyceryl phosphate synthase-like protein BCE_0333 35 COG1646 COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold General function prediction only 42782457 Common - pentapeptide repeats domain protein BCE_3404 11 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 42784616 Common - antiholin-like protein LrgB BCE_5571 83 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 42780724 Common qcrB cytochrome b6 BCE_1650 149 COG1290 QcrB, Cytochrome b subunit of the bc complex Energy production and conversion 42782250 Common - Bacterial regulatory proteins, tetR family domain protein, putative BCE_3195 19 COG1309 AcrR, Transcriptional regulator Transcription 42782796 Common - transcriptional regulator, DeoR family BCE_3746 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 42779311 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative BCE_0230 144 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 42779659 Pathogen - small acid-soluble spore protein, gamma-type BCE_0579 1 None None None 42784114 Common - hypothetical protein BCE_5068 2 COG1522 Lrp, Transcriptional regulators Transcription 42783455 Common - late competence protein ComER BCE_4409 112 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 42783879 Common - hypothetical protein BCE_4833 3 None None None 42781249 Pathogen - hypothetical protein BCE_2183 1 None None None 42781794 Pathogen - hypothetical protein BCE_2737 1 None None None 42781045 Common - nucleoside transporter NupC BCE_1976 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42781053 Common - DNA topoisomerase III BCE_1984 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 42783671 Pathogen - hypothetical protein BCE_4625 1 None None None 42784431 Common - polysaccharide transport protein, putative BCE_5386 12 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42782135 Pathogen - hypothetical protein BCE_3079 1 None None None 42784136 Common - acetyltransferase, GNAT family BCE_5090 6 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783097 Pathogen - hypothetical protein BCE_4050 1 None None None 42782524 Common - hypothetical protein BCE_3473 2 None None None 42783497 Pathogen - hypothetical protein BCE_4451 1 None None None 42781413 Common - phage protein, putative BCE_2350 2 COG3728 XtmA, Phage terminase, small subunit DNA replication, recombination, and repair 42782847 Common - sulfatase BCE_3797 67 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 42782137 Common - mutT/nudix family protein BCE_3081 22 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42784464 Common nuoJ NADH dehydrogenase subunit J BCE_5419 155 COG0839 NuoJ, NADH:ubiquinone oxidoreductase subunit 6 (chain J) Energy production and conversion 42783503 Common - hypothetical protein BCE_4457 37 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42783645 Common - DNA recombinase, putative BCE_4599 86 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42780685 Common - CAAX amino terminal protease family protein BCE_1611 17 None None None 42781034 Pathogen - hypothetical protein BCE_1965 1 None None None 42780697 Common cmk cytidylate kinase BCE_1623 206 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 42781956 Common - glycosyl transferase, WecB/TagA/CpsF family BCE_2900 108 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 42781505 Pathogen - hypothetical protein BCE_2443 1 None None None 42781583 Pathogen - hypothetical protein BCE_2521 1 None None None 42782378 Common - lipoprotein, putative BCE_3325 2 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 42780311 Common - competence transcription factor, putative BCE_1236 5 COG4903 ComK, Genetic competence transcription factor Transcription 42784346 Common - endopeptidase lytE, putative BCE_5301 141 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 42779821 Common - hypothetical protein BCE_0743 5 None None None 42781164 Common - amine oxidase, flavin-containing BCE_2098 64 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 42781446 Common - homoserine/threonine efflux protein, putative BCE_2383 121 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 42780962 Pathogen - hypothetical protein BCE_1893 1 None None None 42783993 Common - hypothetical protein BCE_4947 186 COG0759 COG0759, Uncharacterized conserved protein Function unknown 42780412 Common rfbD dTDP-4-dehydrorhamnose reductase BCE_1338 192 COG1091 RfbD, dTDP-4-dehydrorhamnose reductase Cell envelope biogenesis, outer membrane 42780884 Common - ABC transporter, permease protein, putative BCE_1813 185 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 42781162 Common - bacterial luciferase family protein BCE_2096 111 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 42781924 Common - lipoprotein, putative BCE_2868 3 None None None 42782701 Common - ABC transporter ATP-binding protein BCE_3651 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42781779 Common - hydrolase, alpha/beta fold family BCE_2722 2 None None None 42779787 Common - amino acid ABC transporter, permease protein BCE_0709 181 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42781087 Common - carboxymuconolactone decarboxylase family protein BCE_2018 74 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 42781671 Common - regucalcin family protein BCE_2611 70 COG3386 COG3386, Gluconolactonase Carbohydrate transport and metabolism 42781169 Common - adhesion lipoprotein BCE_2103 181 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 42782187 Common - aminoglycoside phosphotransferase family protein BCE_3132 3 None None None 42782636 Common - hypothetical protein BCE_3586 6 COG5609 COG5609, Uncharacterized conserved protein Function unknown 42784439 Common - aminotransferase family protein BCE_5394 193 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 42780666 Common - hypothetical protein BCE_1592 1 COG2068 COG2068, Uncharacterized MobA-related protein General function prediction only 42780888 Common - short chain dehydrogenase BCE_1817 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42781096 Common - degT/dnrJ/eryC1/strS family protein BCE_2027 185 COG0399 WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Cell envelope biogenesis, outer membrane 42781937 Pathogen - hypothetical protein BCE_2881 1 None None None 42780522 Pathogen - stage 0 sporulation regulatory protein, degenerate BCE_1448 1 None None None 42780182 Pathogen - hypothetical protein BCE_1107 1 None None None 42783011 Common ftsL cell division protein FtsL BCE_3963 7 COG4839 FtsL, Protein required for the initiation of cell division Cell division and chromosome partitioning 42779203 Common rplE 50S ribosomal protein L5 BCE_0122 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 42782394 Pathogen - hypothetical protein BCE_3341 1 None None None 42780283 Pathogen - hypothetical protein BCE_1208 1 None None None 42779511 Common - hypothetical protein BCE_0430 31 COG4807 COG4807, Uncharacterized protein conserved in bacteria Function unknown 42780647 Pathogen - hypothetical protein BCE_1573 1 None None None 42780224 Common hpr protease production regulatory protein Hpr BCE_1149 4 COG1846 MarR, Transcriptional regulators Transcription 42780291 Common - transcriptional regulator, AraC family BCE_1216 151 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 42782870 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_3820 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42784551 Common - hypothetical protein BCE_5506 108 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 42782310 Pathogen - hypothetical protein BCE_3255 1 None None None 42779949 Pathogen - hypothetical protein BCE_0873 1 None None None 42780115 Pathogen - hypothetical protein BCE_1039 1 None None None 42783960 Common metK S-adenosylmethionine synthetase BCE_4914 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 42784376 Common cna putative peptidoglycan bound protein (LPXTG motif) BCE_5331 12 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 42779382 Common - hypothetical protein BCE_0301 12 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42782780 Common - hypothetical protein BCE_3730 71 COG1695 COG1695, Predicted transcriptional regulators Transcription 42779282 Common - hypothetical protein BCE_0201 7 None None None 42784475 Common atpD F0F1 ATP synthase subunit beta BCE_5430 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 42781265 Common - hypothetical protein BCE_2199 2 None None None 42779469 Common - hypothetical protein BCE_0388 4 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42780536 Pathogen - hypothetical protein BCE_1462 1 None None None 42779780 Common gerKB spore germination protein GerKB BCE_0702 13 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 42779648 Common - hypothetical protein BCE_0568 3 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42781013 Common - oxidoreductase BCE_1944 86 COG3384 COG3384, Uncharacterized conserved protein Function unknown 42783417 Common cccA cytochrome c-550 BCE_4371 3 COG2010 CccA, Cytochrome c, mono- and diheme variants Energy production and conversion 42784371 Common celA PTS system, cellobiose-specific IIB component BCE_5326 32 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 42780958 Common - N-acetylmuramoyl-L-alanine amidase, family 3 BCE_1889 177 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42784299 Common - hypothetical protein BCE_5253 66 COG2323 COG2323, Predicted membrane protein Function unknown 42779461 Pathogen - hypothetical protein BCE_0380 1 None None None 42781056 Common - ABC transporter, ATP-binding protein BCE_1987 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42782168 Common - penicillin-binding protein Pbp2b BCE_3113 195 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42784678 Common gidB glucose-inhibited division protein B BCE_5633 195 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 42781271 Common - respiratory nitrate reductase, alpha subunit, degernerate BCE_2206 67 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 42783980 Common - hypothetical protein BCE_4934 2 None None None 42783490 Common - maoC family protein BCE_4444 5 COG2030 MaoC, Acyl dehydratase Lipid metabolism 42779990 Common - PTS system, sucrose-specific IIBC component BCE_0914 43 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 42783157 Common - beta-lactamase BCE_4110 138 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42782026 Common - glutathionylspermidine synthase, putative BCE_2970 53 COG0754 Gsp, Glutathionylspermidine synthase Amino acid transport and metabolism 42779738 Common - amino acid permease family protein BCE_0660 184 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42782194 Common - Predicted glycosyl transferase from UDP-glucuronosyltransferase family BCE_3139 45 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 42783919 Common - homoserine O-acetyltransferase BCE_4873 132 COG2021 MET2, Homoserine acetyltransferase Amino acid transport and metabolism 42782193 Pathogen - hypothetical protein BCE_3138 1 None None None 42779600 Common - hypothetical protein BCE_0520 5 COG4840 COG4840, Uncharacterized protein conserved in bacteria Function unknown 42784075 Pathogen - hypothetical protein BCE_5029 1 None None None 42783209 Common - mutT/nudix family protein BCE_4163 188 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 42784063 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase BCE_5017 107 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 42780496 Common - hypothetical protein BCE_1422 37 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 42782297 Common - lipoprotein, putative BCE_3242 17 COG4895 COG4895, Uncharacterized conserved protein Function unknown 42781350 Common - nitroreductase family protein BCE_2286 82 COG0778 NfnB, Nitroreductase Energy production and conversion 42783021 Common - phospholipase, putative BCE_3973 133 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 42779953 Common - alcohol dehydrogenase, zinc-containing BCE_0877 147 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42780834 Common - flagellar protein FliS, putative BCE_1761 6 COG1516 FliS, Flagellin-specific chaperone FliS Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones 42783198 Common - xanthine/uracil permease family protein BCE_4152 135 COG2252 COG2252, Permeases General function prediction only 42783617 Pathogen - hypothetical protein BCE_4571 1 None None None 42782983 Common uraA uracil permease BCE_3935 125 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 42784211 Pathogen - hypothetical protein BCE_5165 1 None None None 42779935 Common - alkaline ceramidase domain protein BCE_0859 10 None None None 42783061 Common - hypothetical protein BCE_4014 3 None None None 42783218 Common - hypothetical protein BCE_4172 29 COG2056 COG2056, Predicted permease General function prediction only 42781487 Common - oligopeptide ABC transporter permease protein BCE_2425 27 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42779300 Common - nucleoside transporter, PnuC family BCE_0219 58 COG3201 PnuC, Nicotinamide mononucleotide transporter Coenzyme metabolism 42781256 Pathogen - hypothetical protein BCE_2190 1 None None None 42784576 Common - sugar-binding transcriptional regulator, LacI family BCE_5531 129 COG1609 PurR, Transcriptional regulators Transcription 42782513 Common - phosphoesterase, putative subfamily BCE_3460 71 COG0622 COG0622, Predicted phosphoesterase General function prediction only 42779089 Common - hypothetical protein BCE_0008 3 None None None 42780261 Common - sugar-binding transcriptional regulator, LacI family BCE_1186 129 COG1609 PurR, Transcriptional regulators Transcription 42780810 Common - NAD(P)H-flavin oxidoreductase BCE_1736 90 COG0778 NfnB, Nitroreductase Energy production and conversion 42784457 Common murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BCE_5412 211 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 42780204 Common - IS3-family transposase, OrfB BCE_1128 138 COG2801 Tra5, Transposase and inactivated derivatives DNA replication, recombination, and repair 42781667 Common - hypothetical protein BCE_2607 25 COG2323 COG2323, Predicted membrane protein Function unknown 42779179 Common rplA 50S ribosomal protein L1 BCE_0098 242 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 42779814 Common rbsC ribose ABC transporter, permease protein BCE_0736 150 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 42784671 Common ychF translation-associated GTPase BCE_5626 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 42784312 Common lgT prolipoprotein diacylglyceryl transferase BCE_5266 188 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 42783713 Common - hypothetical protein BCE_4667 5 COG4509 COG4509, Uncharacterized protein conserved in bacteria Function unknown 42780305 Common - trifolitoxin immunity domain protein BCE_1230 13 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 42779720 Common - malate dehydrogenase, putative BCE_0642 199 COG0281 SfcA, Malic enzyme Energy production and conversion 42783779 Common - transcriptional regulator, GntR family BCE_4733 126 COG2186 FadR, Transcriptional regulators Transcription 42784375 Common - sortase family protein BCE_5330 21 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 42782058 Common - acetyltransferase, GNAT family BCE_3002 151 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42784334 Common - carboxyl-terminal protease BCE_5288 183 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 42784627 Common - hypothetical protein BCE_5582 6 COG2342 COG2342, Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase Carbohydrate transport and metabolism 42779766 Common - 2-amino-3-ketobutyrate coenzyme A ligase BCE_0688 190 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 42779709 Common - glycerol-3-phosphate ABC transporter, permease protein, putative BCE_0630 152 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 42780381 Pathogen - hypothetical protein BCE_1307 1 None None None 42779719 Common - citrate cation symporter family BCE_0641 30 COG3493 CitS, Na+/citrate symporter Energy production and conversion 42782115 Common - catalase BCE_3059 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 42779887 Common kdpB potassium-transporting ATPase subunit B BCE_0810 232 COG2216 KdpB, High-affinity K+ transport system, ATPase chain B Inorganic ion transport and metabolism 42780050 Common - hypothetical protein BCE_0974 5 None None None 42779609 Common - hypothetical protein BCE_0529 2 None None None 42782309 Common lipP lipase BCE_3254 127 COG0657 Aes, Esterase/lipase Lipid metabolism 42781826 Common - transcriptional regulator, GntR family/aminotransferase, class I protein BCE_2769 234 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42782227 Pathogen - hypothetical protein BCE_3172 1 None None None 42779704 Pathogen - hypothetical protein BCE_0625 1 None None None 42784228 Common - hypothetical protein BCE_5182 131 COG2151 PaaD, Predicted metal-sulfur cluster biosynthetic enzyme General function prediction only 42781707 Pathogen - hypothetical protein BCE_2648 1 None None None 42782558 Common - penicillin-binding protein, putative BCE_3507 146 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42782707 Common - AmiS/UreI family transporter protein, putative BCE_3657 17 None None None 42779661 Common - hypothetical protein BCE_0581 1 None None None 42784522 Common - cardiolipin synthetase domain protein BCE_5477 152 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 42782152 Common - hypothetical protein BCE_3096 1 None None None 42782878 Common - stage III sporulation protein E BCE_3828 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 42781730 Common kinB sporulation kinase B BCE_2671 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779258 Common - Tn7-like transposition protein D BCE_0177 17 None None None 42779232 Common - hypothetical protein BCE_0151 2 None None None 42779102 Common - hypothetical protein BCE_0021 137 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 42782291 Pathogen - hypothetical protein BCE_3236 1 None None None 42781579 Common - indolepyruvate decarboxylase, putative BCE_2517 221 COG3961 COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only 42780742 Common panB 3-methyl-2-oxobutanoate hydroxymethyltransferase BCE_1668 195 COG0413 PanB, Ketopantoate hydroxymethyltransferase Coenzyme metabolism 42782997 Common sigE sporulation sigma factor SigE BCE_3949 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42783177 Pathogen - hypothetical protein BCE_4130 1 None None None 42782873 Common - sugar ABC transporter, permease protein BCE_3823 115 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 42779383 Common - hypothetical protein BCE_0302 2 None None None 42780845 Common flgD flagellar basal body rod modification protein BCE_1772 45 COG1843 FlgD, Flagellar hook capping protein Cell motility and secretion 42783620 Pathogen - hypothetical protein BCE_4574 1 None None None 42779857 Common gerLB spore germination protein GerLB BCE_0779 6 None None None 42779680 Common - iron-sulfur cluster-binding protein, putative BCE_0600 141 COG1600 COG1600, Uncharacterized Fe-S protein Energy production and conversion 42779222 Common - cobalt transport protein BCE_0141 73 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 42783233 Common bioF 8-amino-7-oxononanoate synthase BCE_4187 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 42779842 Common - DNA-binding protein BCE_0764 60 COG1476 COG1476, Predicted transcriptional regulators Transcription 42782163 Common - phenazine biosynthesis protein PhzF family BCE_3108 106 COG0384 COG0384, Predicted epimerase, PhzC/PhzF homolog General function prediction only 42782363 Common - 6-aminohexanoate-dimer hydrolase, putative BCE_3310 90 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42779714 Common - sensor histidine kinase BCE_0635 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42781438 Pathogen - hypothetical protein BCE_2375 1 None None None 42781456 Common - transcriptional regulator, ArsR family BCE_2393 36 COG4189 COG4189, Predicted transcriptional regulator Transcription 42784563 Common - D-alanyl-D-alanine carboxypeptidase, putative BCE_5518 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42781811 Common gerXB spore germination protein XB BCE_2754 12 None None None 42780455 Common - DNA-binding protein BCE_1381 67 COG1476 COG1476, Predicted transcriptional regulators Transcription 42782623 Common - hypothetical protein BCE_3573 22 COG1963 COG1963, Uncharacterized protein conserved in bacteria Function unknown 42779996 Common - transcriptional regulator, AsnC family BCE_0920 142 COG1522 Lrp, Transcriptional regulators Transcription 42782615 Common - hypothetical protein BCE_3565 4 COG2367 PenP, Beta-lactamase class A Defense mechanisms 42784393 Common - sulfatase BCE_5348 69 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 42781630 Common - acetyltransferase, GNAT family BCE_2569 23 COG0456 RimI, Acetyltransferases General function prediction only 42782688 Common - hypothetical protein BCE_3638 2 None None None 42781200 Common - hypothetical protein BCE_2134 2 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42784554 Common - iron compound ABC transporter, iron compound-binding protein BCE_5509 88 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42784119 Common - hesB/yadR/yfhF family protein BCE_5073 162 COG0316 IscA, Uncharacterized conserved protein Function unknown 42782681 Common - DNA polymerase III subunit epsilon BCE_3631 199 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 42783409 Common - hypothetical protein BCE_4363 3 None None None 42783594 Common folC folylpolyglutamate synthase BCE_4548 220 COG0285 FolC, Folylpolyglutamate synthase Coenzyme metabolism 42780544 Common nrdE ribonucleotide-diphosphate reductase subunit alpha BCE_1470 219 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 42783136 Common - phage integrase family protein BCE_4089 2 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42783469 Common - hypothetical protein BCE_4423 2 None None None 42779961 Pathogen - hypothetical protein BCE_0885 1 None None None 42782404 Common - hypothetical protein BCE_3351 3 None None None 42779338 Pathogen - hypothetical protein BCE_0256 1 None None None 42781024 Common - acetyltransferase, GNAT family BCE_1955 148 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783294 Common - hemolysin A BCE_4248 132 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 42779813 Common rbsA ribose ABC transporter, ATP-binding protein BCE_0735 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 42780376 Common - oligopeptide ABC transporter, permease protein BCE_1302 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42779460 Common - hypothetical protein BCE_0379 3 None None None 42783321 Common - hypothetical protein BCE_4275 3 None None None 42784621 Common - major facilitator family transporter BCE_5576 191 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780796 Common - hypothetical protein BCE_1722 48 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 42781218 Common - 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase BCE_2152 60 COG2159 COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold General function prediction only 42779672 Common - transcriptional regulator, Fur family BCE_0592 207 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 42780377 Common - oligopeptide ABC transporter, ATP-binding protein BCE_1303 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 42779493 Common - phage structural protein, truncation BCE_0412 4 None None None 42781593 Common - lipase/acylhydrolase, putative BCE_2532 21 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 42781356 Common - sensor histidine kinase BCE_2292 146 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 42782646 Common - hypothetical protein BCE_3596 10 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42784532 Common - LPXTG-motif cell wall anchor domain protein BCE_5487 60 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 42782903 Common - hypothetical protein BCE_3853 40 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 42782814 Common fer ferredoxin BCE_3764 6 COG1141 Fer, Ferredoxin Energy production and conversion 42782439 Common - hypothetical protein BCE_3386 7 COG5516 COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding General function prediction only 42783276 Common - hypothetical protein BCE_4230 56 COG2323 COG2323, Predicted membrane protein Function unknown 42783222 Common - hypothetical protein BCE_4176 2 None None None 42781805 Pathogen - hypothetical protein BCE_2748 1 None None None 42781911 Common ppaC putative manganese-dependent inorganic pyrophosphatase BCE_2854 64 COG1227 PPX1, Inorganic pyrophosphatase/exopolyphosphatase Energy production and conversion 42784571 Common - hypothetical protein BCE_5526 18 None None None 42780233 Common - hypothetical protein BCE_1158 35 COG3402 COG3402, Uncharacterized conserved protein Function unknown 42782594 Common - glyoxalase family protein BCE_3544 38 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 42779316 Common - hypothetical protein BCE_0235 3 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42783808 Pathogen - proA domain protein BCE_4762 1 None None None 42781660 Pathogen - hypothetical protein BCE_2600 1 None None None 42783004 Common murG N-acetylglucosaminyl transferase BCE_3956 208 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 42779293 Common - transcription regulator TetR/AcrR family protein BCE_0212 37 COG1309 AcrR, Transcriptional regulator Transcription 42780621 Common nirA nitrite reductase BCE_1547 170 COG0155 CysI, Sulfite reductase, beta subunit (hemoprotein) Inorganic ion transport and metabolism 42781285 Pathogen - hypothetical protein BCE_2220 1 None None None 42781739 Common - transcriptional regulator, TetR family domain protein BCE_2680 66 COG1309 AcrR, Transcriptional regulator Transcription 42782651 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_3601 196 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42783707 Common - sensor histidine kinase BCE_4661 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779214 Common infA translation initiation factor IF-1 BCE_0133 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 42784017 Pathogen - cell wall surface anchor family protein BCE_4971 1 None None None 42783357 Common - hypothetical protein BCE_4311 5 None None None 42784645 Common - DNA recombinase, putative, truncation BCE_5600 14 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42781997 Common - hypothetical protein BCE_2941 6 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 42782956 Common - conserved hypothetical protein TIGR00048 BCE_3906 194 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 42784575 Common - lipase/acylhydrolase, putative BCE_5530 24 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 42780861 Common fliR flagellar biosynthesis protein FliR BCE_1788 97 COG1684 FliR, Flagellar biosynthesis pathway, component FliR Cell motility and secretion / Intracellular trafficking and secretion 42779428 Common - transcriptional regulator, MarR family BCE_0347 96 COG1846 MarR, Transcriptional regulators Transcription 42780007 Common - NAD(P)H dehydrogenase, quinone family BCE_0931 58 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 42780126 Pathogen - hypothetical protein BCE_1050 1 None None None 42782447 Pathogen - hypothetical protein BCE_3394 1 None None None 42783087 Common - short chain dehydrogenase BCE_4040 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42781276 Common xylB xylulokinase BCE_2211 184 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 42782988 Common ileS isoleucyl-tRNA synthetase BCE_3940 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42780259 Common - hypothetical protein BCE_1184 2 None None None 42783811 Common argG argininosuccinate synthase BCE_4765 216 COG0137 ArgG, Argininosuccinate synthase Amino acid transport and metabolism 42784500 Common - modification methylase, HemK family BCE_5455 230 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 42781286 Pathogen - hypothetical protein BCE_2221 1 None None None 42782052 Common hisC histidinol-phosphate aminotransferase BCE_2996 241 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 42784315 Common - hypothetical protein BCE_5269 4 None None None 42780059 Common - Peptidase, family M20/M25/M40 protein BCE_0983 90 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 42780251 Common - hypothetical protein BCE_1176 26 COG4219 MecR1, Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component Transcription / Signal transduction mechanisms 42780913 Pathogen - hypothetical protein BCE_1843 1 None None None 42781859 Common acoC branched-chain alpha-keto acid dehydrogenase subunit E2 BCE_2802 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 42781949 Common - response regulator BCE_2893 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42779632 Pathogen - hypothetical protein BCE_0552 2 None None None 42780334 Common hemH ferrochelatase BCE_1260 152 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 42780011 Common - thiJ/pfpI family protein BCE_0935 146 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 42784049 Common - dihydroorotase BCE_5003 27 COG3964 COG3964, Predicted amidohydrolase General function prediction only 42781392 Common atoD acetate CoA-transferase, subunit A BCE_2329 94 COG1788 AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Lipid metabolism 42784086 Common - hypothetical protein BCE_5040 241 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 42779397 Pathogen - hypothetical protein BCE_0316 1 None None None 42783975 Common - hydrolase, alpha/beta fold family BCE_4929 169 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42780268 Common - acyl-CoA synthetase BCE_1193 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42781296 Common - PBS lyase HEAT-like repeat domain protein BCE_2231 30 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 42783941 Common - aspartate racemase family protein BCE_4895 78 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 42780881 Common - transcriptional regulator, LysR family BCE_1810 191 COG0583 LysR, Transcriptional regulator Transcription 42781795 Common - hypothetical protein BCE_2738 17 None None None 42782235 Common - YvpB-like protein BCE_3180 4 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 42782413 Common - DNA-binding protein BCE_3360 66 COG1476 COG1476, Predicted transcriptional regulators Transcription 42783754 Common - hypothetical protein BCE_4708 15 None None None 42783571 Common pheA prephenate dehydratase BCE_4525 213 COG0077 PheA, Prephenate dehydratase Amino acid transport and metabolism 42782797 Common - alcohol dehydrogenase, iron-containing BCE_3747 169 COG1979 COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family Energy production and conversion 42783098 Common - drug resistance transporter, EmrB/QacA family BCE_4051 227 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783341 Common - hypothetical protein BCE_4295 4 None None None 42779855 Common - sodium/solute symporter family protein BCE_0777 163 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 42783034 Common - hypothetical protein BCE_3986 3 None None None 42783952 Common - PAP2 family protein BCE_4906 46 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 42780993 Common - polysaccharide deacetylase, putative BCE_1924 110 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42780874 Common - hypothetical protein BCE_1802 24 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 42782992 Common - ylmF protein BCE_3944 55 COG1799 COG1799, Uncharacterized protein conserved in bacteria Function unknown 42783787 Pathogen - hypothetical protein BCE_4741 1 None None None 42782831 Common - sensory box/GGDEF family protein BCE_3781 182 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 42780391 Common - protozoan/cyanobacterial globin family protein BCE_1317 68 COG2346 COG2346, Truncated hemoglobins General function prediction only 42781925 Common - hypothetical protein BCE_2869 2 None None None 42779510 Pathogen - hypothetical protein BCE_0429 1 None None None 42783437 Common - hypothetical protein BCE_4391 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 42781145 Common - transcriptional regulator, ArsR family BCE_2079 41 COG0640 ArsR, Predicted transcriptional regulators Transcription 42780067 Common - polysaccharide deacetylase family protein BCE_0991 110 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42780727 Common - hypothetical protein BCE_1653 16 COG4347 COG4347, Predicted membrane protein Function unknown 42783183 Common spoVAC stage V sporulation protein AC BCE_4137 15 None None None 42782423 Common - MutT/nudix family protein BCE_3370 85 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42780210 Pathogen - hypothetical protein BCE_1134 1 None None None 42780610 Common - CDP-diacylglycerol--serine O-phosphatidyltransferase, putative BCE_1536 153 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 42781334 Common - 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative BCE_2270 207 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 42781414 Pathogen - hypothetical protein BCE_2351 1 None None None 42784280 Common secG preprotein translocase subunit SecG BCE_5234 6 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 42780271 Common - sulfate ABC transporter, sulfate/thiosulfate-binding protein BCE_1196 88 COG1613 Sbp, ABC-type sulfate transport system, periplasmic component Inorganic ion transport and metabolism 42781401 Pathogen - hypothetical protein BCE_2338 1 None None None 42779353 Common dal alanine racemase BCE_0272 200 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 42782206 Common - hypothetical protein BCE_3151 1 None None None 42783972 Common - sensor histidine kinase, putative BCE_4926 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42782859 Common - pyruvate ferredoxin oxidoreductase, alpha subunit, putative BCE_3809 117 COG0674 PorA, Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit Energy production and conversion 42783448 Common gpR germination protease BCE_4402 15 None None None 42783827 Common - acetyl-CoA synthetase, putative BCE_4781 222 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 42783520 Pathogen - hypothetical protein BCE_4474 1 None None None 42781772 Pathogen - hypothetical protein BCE_2715 1 None None None 42782257 Common - spore maturation protein cgeB, putative BCE_3202 23 COG4641 COG4641, Uncharacterized protein conserved in bacteria Function unknown 42779376 Common - sensor histidine kinase BCE_0295 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42780468 Pathogen - SinI protein BCE_1394 1 None None None 42782854 Common cotE spore coat protein E BCE_3804 3 None None None 42781060 Common - hypothetical protein BCE_1991 5 None None None 42783143 Pathogen - hypothetical protein BCE_4096 1 None None None 42780400 Common - glycosyl transferase, group 2 family protein BCE_1326 146 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42779897 Pathogen - hypothetical protein BCE_0820 1 None None None 42783892 Common - dipeptidase PepV BCE_4846 100 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 42779685 Common - hypothetical protein BCE_0605 71 COG2766 PrkA, Putative Ser protein kinase Signal transduction mechanisms 42779878 Common - sulfur carrier protein ThiS BCE_0801 39 COG2104 ThiS, Sulfur transfer protein involved in thiamine biosynthesis Coenzyme metabolism 42784004 Common - lipoprotein, putative BCE_4958 2 None None None 42784529 Common - ABC transporter, permease protein, putative BCE_5484 57 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 42782720 Common kinA sporulation kinase A BCE_3670 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779251 Pathogen - hypothetical protein BCE_0170 2 None None None 42782388 Pathogen - hypothetical protein BCE_3335 1 None None None 42779750 Common - hypothetical protein BCE_0672 38 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 42784651 Common - modification methylase, putative BCE_5606 36 None None None 42781727 Common - ABC transporter, ATP-binding protein BCE_2668 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 42782272 Pathogen - hypothetical protein BCE_3217 1 None None None 42783080 Common - hypothetical protein BCE_4033 2 None None None 42779802 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_0724 205 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 42779747 Pathogen - hypothetical protein BCE_0669 1 None None None 42784352 Common - UDP-N-acetylglucosamine 2-epimerase BCE_5307 156 COG0381 WecB, UDP-N-acetylglucosamine 2-epimerase Cell envelope biogenesis, outer membrane 42782428 Common maA maltose O-acetyltransferase BCE_3375 100 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 42783521 Pathogen - hypothetical protein BCE_4475 1 None None None 42781475 Pathogen - hypothetical protein BCE_2412 1 None None None 42782843 Common - 1-phosphatidylinositol phosphodiesterase BCE_3793 8 None None None 42784285 Common gpmA phosphoglyceromutase BCE_5239 126 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 42779988 Common - transcriptional regulator, RpiR family, putative BCE_0912 119 COG1737 RpiR, Transcriptional regulators Transcription 42779896 Common - hypothetical protein BCE_0819 98 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 42780436 Common trpA tryptophan synthase subunit alpha BCE_1362 216 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 42782543 Common - CAAX amino terminal protease family family BCE_3492 13 None None None 42781556 Common - hypothetical protein BCE_2494 39 COG1649 COG1649, Uncharacterized protein conserved in bacteria Function unknown 42781243 Common - hypothetical protein BCE_2177 2 None None None 42783830 Common thiI thiamine biosynthesis protein ThiI BCE_4784 93 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 42782887 Common dapG aspartate kinase I BCE_3837 235 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 42783110 Common malC maltosaccharide ABC transporter, permease protein BCE_4063 174 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 42780679 Pathogen - hypothetical protein BCE_1605 1 None None None 42784400 Common - hypothetical protein BCE_5355 2 COG3706 PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain Signal transduction mechanisms 42779508 Common - sensor histidine kinase, putative BCE_0427 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42780828 Common - hypothetical protein BCE_1755 2 None None None 42781778 Common - mutT/nudix family protein BCE_2721 23 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42783117 Common - hypothetical protein BCE_4070 1 COG1714 COG1714, Predicted membrane protein/domain Function unknown 42784121 Common - hypothetical protein BCE_5075 4 COG4844 COG4844, Uncharacterized protein conserved in bacteria Function unknown 42781251 Common - hypothetical protein BCE_2185 3 None None None 42781866 Common - hypothetical protein BCE_2809 3 None None None 42779840 Common - amino acid permease family protein BCE_0762 176 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 42781541 Pathogen - hypothetical protein BCE_2479 1 None None None 42783472 Pathogen - lipoprotein, putative BCE_4426 1 None None None 42782501 Common - hypothetical protein BCE_3448 7 COG4817 COG4817, Uncharacterized protein conserved in bacteria Function unknown 42783857 Pathogen - hypothetical protein BCE_4811 1 None None None 42780576 Common uppP undecaprenyl pyrophosphate phosphatase BCE_1502 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 42780598 Common hisZ ATP phosphoribosyltransferase regulatory subunit BCE_1524 249 COG3705 HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis Amino acid transport and metabolism 42780699 Common rpsA 30S ribosomal protein S1 BCE_1625 231 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 42782679 Common sspN acid-soluble spore protein N BCE_3629 2 None None None 42781431 Pathogen - hypothetical protein BCE_2368 1 COG0401 COG0401, Uncharacterized homolog of Blt101 Function unknown 42781636 Common - hypothetical protein BCE_2575 12 COG3832 COG3832, Uncharacterized conserved protein Function unknown 42782000 Common - ABC transporter, ATP-binding protein, putative BCE_2944 248 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42784380 Common - transcriptional regulator, LysR family BCE_5335 192 COG0583 LysR, Transcriptional regulator Transcription 42780571 Pathogen - hypothetical protein BCE_1497 1 None None None 42784243 Pathogen - hypothetical protein BCE_5197 1 None None None 42780360 Common - hypothetical protein BCE_1286 3 None None None 42783338 Pathogen - hypothetical protein BCE_4292 1 None None None 42783978 Common - hypothetical protein BCE_4932 11 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 42781604 Common - ABC transporter, ATP-binding protein BCE_2543 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42783226 Common ribE riboflavin synthase subunit alpha BCE_4180 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 42783165 Common glcT transcription antiterminator GlcT BCE_4118 29 COG3711 BglG, Transcriptional antiterminator Transcription 42779223 Common truA tRNA pseudouridine synthase A BCE_0142 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 42780578 Common - hypothetical protein BCE_1504 10 None None None 42780554 Common - hypothetical protein BCE_1480 7 COG2128 COG2128, Uncharacterized conserved protein Function unknown 42781839 Common - hypothetical protein BCE_2782 2 None None None 42779900 Common - putative disulfide oxidoreductase BCE_0823 21 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 42784205 Pathogen - hypothetical protein BCE_5159 1 None None None 42780002 Common - sugE protein, putative BCE_0926 128 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 42783265 Pathogen - hypothetical protein BCE_4219 1 None None None 42784306 Common - mutT/nudix family protein BCE_5260 68 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42781196 Pathogen - hypothetical protein BCE_2130 1 None None None 42782802 Pathogen - hypothetical protein BCE_3752 1 None None None 42783018 Common - hypothetical protein BCE_3970 19 COG1399 COG1399, Predicted metal-binding, possibly nucleic acid-binding protein General function prediction only 42783724 Common - recombination and DNA strand exchange inhibitor protein BCE_4678 201 COG1193 COG1193, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 42781996 Common - pantothenate kinase BCE_2940 5 COG5146 PanK, Pantothenate kinase, acetyl-CoA regulated Coenzyme metabolism 42779165 Common - hypothetical protein BCE_0084 47 COG4956 COG4956, Integral membrane protein (PIN domain superfamily) General function prediction only 42781694 Pathogen - hypothetical protein BCE_2635 1 None None None 42784189 Common - acetyl-CoA acetyltransferase BCE_5143 184 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 42784109 Common - mutT/nudix family protein BCE_5063 80 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42780584 Pathogen - hypothetical protein BCE_1510 1 None None None 42782127 Pathogen - hypothetical protein BCE_3071 1 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 42783899 Common - hypothetical protein BCE_4853 6 COG3832 COG3832, Uncharacterized conserved protein Function unknown 42782176 Common - conserved hypothetical protein TIGR00370 BCE_3121 107 COG2049 DUR1, Allophanate hydrolase subunit 1 Amino acid transport and metabolism 42781179 Common - phosphoglycerate mutase family protein BCE_2113 171 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42781785 Common - acetyltransferase, GNAT family BCE_2728 8 COG0456 RimI, Acetyltransferases General function prediction only 42782263 Common - arsenite efflux transporter ArsB BCE_3208 141 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 42779448 Common - hypothetical protein BCE_0367 2 None None None 42781620 Common - hypothetical protein BCE_2559 33 COG2267 PldB, Lysophospholipase Lipid metabolism 42783515 Common - Holliday junction resolvase-like protein BCE_4469 189 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 42783188 Common sigF sporulation sigma factor SigF BCE_4142 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42779274 Common - RNA polymerase sigma-70 factor, ECF subfamily BCE_0193 13 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42781821 Common - hypothetical protein BCE_2764 21 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 42780199 Common glpP glycerol uptake operon antiterminator regulatory protein BCE_1123 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 42783489 Common - DNA-binding protein BCE_4443 116 COG1396 HipB, Predicted transcriptional regulators Transcription 42779974 Common - hypothetical protein BCE_0898 3 None None None 42780343 Common - ammonium transporter BCE_1269 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 42779441 Common - polysaccharide deacetylase-like protein BCE_0360 46 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42780214 Common - hypothetical protein BCE_1139 13 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 42784168 Common - ABC transporter, substrate-binding protein, putative BCE_5122 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 42779690 Common glnQ glutamine ABC transporter, ATP-binding protein BCE_0610 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 42780822 Common cheA chemotaxis histidine kinase BCE_1749 169 COG0643 CheA, Chemotaxis protein histidine kinase and related kinases Cell motility and secretion / Signal transduction mechanisms 42781968 Pathogen - hypothetical protein BCE_2912 1 None None None 42783656 Common recJ single-stranded-DNA-specific exonuclease RecJ BCE_4610 194 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 42780756 Pathogen - hypothetical protein BCE_1682 1 None None None 42782664 Common - hypothetical protein BCE_3614 21 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 42782893 Common - zinc protease, insulinase family BCE_3843 202 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 42779594 Common - tellurium resistance protein BCE_0514 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 42781084 Common - transcriptional regulator, LysR family BCE_2015 159 COG0583 LysR, Transcriptional regulator Transcription 42783322 Common - hydrolase, haloacid dehalogenase-like family BCE_4276 201 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 42779921 Common - DNA recombinase, putative BCE_0845 106 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42783741 Common - DNA replication protein BCE_4695 3 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42779767 Common - hypothetical protein BCE_0689 195 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42780441 Common - hypothetical protein BCE_1367 13 COG5634 COG5634, Uncharacterized conserved protein Function unknown 42781174 Common - hypothetical protein BCE_2108 4 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 42783440 Common dnaJ chaperone protein dnaJ BCE_4394 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 42780317 Common sipT signal peptidase I BCE_1243 202 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 42783882 Common - thioredoxin family protein BCE_4836 36 COG0526 TrxA, Thiol-disulfide isomerase and thioredoxins Posttranslational modification, protein turnover, chaperones / Energy production and conversion 42784182 Common - spore coat protein F-related protein BCE_5136 5 None None None 42781720 Common - hydrolase, haloacid dehalogenase-like family BCE_2661 129 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42783873 Common - transcriptional regulator, MerR family BCE_4827 130 COG0789 SoxR, Predicted transcriptional regulators Transcription 42780764 Common - hypothetical protein BCE_1690 134 COG0116 COG0116, Predicted N6-adenine-specific DNA methylase DNA replication, recombination, and repair 42783420 Common dnaG DNA primase BCE_4374 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 42781718 Common - cytochrome P450 family protein BCE_2659 78 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 42784325 Common - hypothetical protein BCE_5279 113 COG2855 COG2855, Predicted membrane protein Function unknown 42781104 Common - hypothetical protein BCE_2035 28 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 42781627 Pathogen - hypothetical protein BCE_2566 1 None None None 42780768 Common - acetyltransferase, GNAT family BCE_1694 11 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42784056 Common - DNA-binding response regulator BCE_5010 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42779543 Common - hypothetical protein BCE_0463 22 COG3541 COG3541, Predicted nucleotidyltransferase General function prediction only 42784601 Common - IS231-related transposase BCE_5556 15 COG5421 COG5421, Transposase DNA replication, recombination, and repair 42779430 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C BCE_0349 156 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 42781673 Common cwlJ cell wall hydrolase BCE_2614 12 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 42783559 Common nadA quinolinate synthetase BCE_4513 196 COG0379 NadA, Quinolinate synthase Coenzyme metabolism 42779677 Common - penicillin-binding domain protein BCE_0597 200 COG5009 MrcA, Membrane carboxypeptidase/penicillin-binding protein Cell envelope biogenesis, outer membrane 42779832 Common - hypothetical protein BCE_0754 1 None None None 42784199 Common - cell wall surface anchor family protein BCE_5153 13 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 42783126 Pathogen - hypothetical protein BCE_4079 1 None None None 42784146 Common - hypothetical protein BCE_5100 3 None None None 42779965 Common - ABC transporter, ATP-binding protein BCE_0889 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42783841 Common - hypothetical protein BCE_4795 2 None None None 42781784 Common - hypothetical protein BCE_2727 7 COG3878 COG3878, Uncharacterized protein conserved in bacteria Function unknown 42780289 Common - hypothetical protein BCE_1214 7 None None None 42782306 Common - P450 heme-thiolate protein, putative BCE_3251 75 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 42783945 Common - ATP synthase B chain [imported], putative BCE_4899 32 COG3937 COG3937, Uncharacterized conserved protein Function unknown 42782143 Common - hypothetical protein BCE_3087 110 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42780189 Pathogen - hypothetical protein BCE_1113 1 None None None 42781488 Common - pyruvate oxidase BCE_2426 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 42784558 Common - hypothetical protein BCE_5513 3 COG4844 COG4844, Uncharacterized protein conserved in bacteria Function unknown 42783254 Common sdhA L-serine dehydratase, iron-sulfur-dependent, alpha subunit BCE_4208 124 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 42782728 Common hutI imidazolonepropionase BCE_3678 107 COG1228 HutI, Imidazolonepropionase and related amidohydrolases Secondary metabolites biosynthesis, transport, and catabolism 42781114 Common - aminoglycoside 6-adenylyltransferase, putative BCE_2046 10 None None None 42779530 Common - iron compound ABC transporter, permease protein BCE_0449 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42783986 Common - L-2-haloalkanoic acid dehalogenase BCE_4940 145 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 42782087 Common proC pyrroline-5-carboxylate reductase BCE_3031 215 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 42784234 Common - trkA domain protein BCE_5188 30 COG0490 COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels Inorganic ion transport and metabolism 42783953 Common - glycosyl transferase, group 1 family protein BCE_4907 224 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 42784278 Common vacB ribonuclease R BCE_5232 213 COG0557 VacB, Exoribonuclease R Transcription 42782774 Common - 2,3-cyclic-nucleotide 2-phosphodiesterase, putative BCE_3724 137 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 42784173 Common - thioredoxin, putative BCE_5127 15 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 42784426 Common galE UDP-glucose 4-epimerase BCE_5381 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 42782560 Pathogen - hypothetical protein BCE_3509 1 None None None 42783138 Common - hypothetical protein BCE_4091 35 COG1378 COG1378, Predicted transcriptional regulators Transcription 42783495 Common - iron compound ABC transporter, permease protein BCE_4449 192 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42781459 Common - oxalate:formate antiporter, putative BCE_2396 106 COG2223 NarK, Nitrate/nitrite transporter Inorganic ion transport and metabolism 42780480 Pathogen - hypothetical protein BCE_1406 2 COG5658 COG5658, Predicted integral membrane protein Function unknown 42783414 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BCE_4368 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 42784128 Common - hypothetical protein BCE_5082 3 None None None 42780278 Common - hypothetical protein BCE_1203 4 None None None 42782317 Common - hypothetical protein BCE_3262 2 COG1409 Icc, Predicted phosphohydrolases General function prediction only 42784102 Common - bioY family protein BCE_5056 41 COG1268 BioY, Uncharacterized conserved protein General function prediction only 42783541 Pathogen - hypothetical protein BCE_4495 1 None None None 42784040 Common - permease, putative domain protein BCE_4994 15 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 42779546 Common - fatty acid desaturase BCE_0466 36 COG3239 DesA, Fatty acid desaturase Lipid metabolism 42783327 Common - hypothetical protein BCE_4281 5 COG4817 COG4817, Uncharacterized protein conserved in bacteria Function unknown 42783215 Common - 5'-nucleotidase family protein BCE_4169 142 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 42783648 Common - hypothetical protein BCE_4602 5 COG3081 COG3081, Nucleoid-associated protein General function prediction only 42779099 Pathogen - hypothetical protein BCE_0018 1 None None None 42782702 Common - helix-turn-helix domain protein BCE_3652 29 COG1396 HipB, Predicted transcriptional regulators Transcription 42783987 Common - hypothetical protein BCE_4941 3 None None None 42782421 Pathogen - acetyltransferase, GNAT family BCE_3368 1 None None None 42779404 Common purL phosphoribosylformylglycinamidine synthase II BCE_0323 234 COG0046 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Nucleotide transport and metabolism 42779786 Common - amino acid ABC transporter, amino acid-binding protein BCE_0708 171 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 42783719 Common brnQ branched-chain amino acid transport system II carrier protein BCE_4673 49 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42779919 Common - hypothetical protein BCE_0843 3 None None None 42780012 Common - permease, putative BCE_0936 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 42780292 Common - sensor histidine kinase BCE_1217 221 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42782663 Common - transcription regulator-like protein BCE_3613 34 COG2378 COG2378, Predicted transcriptional regulator Transcription 42783426 Common era GTP-binding protein Era BCE_4380 226 COG1159 Era, GTPase General function prediction only 42780092 Common - 5-methylcytosine-specific restriction related enzyme BCE_1016 54 COG1401 McrB, GTPase subunit of restriction endonuclease Defense mechanisms 42780160 Common rsbV anti sigma b factor antagonist RsbV BCE_1084 60 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 42781362 Common - hypothetical protein BCE_2298 41 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42780847 Common - hypothetical protein BCE_1774 2 None None None 42784311 Common - pyrophosphatase PpaX BCE_5265 183 COG0546 Gph, Predicted phosphatases General function prediction only 42784072 Common glgD glycogen biosynthesis protein GlgD BCE_5026 115 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 42779288 Common - oligopeptide ABC transporter, ATP-binding protein BCE_0207 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 42783997 Common - spore germination protein GerPF-like protein BCE_4951 2 None None None 42782198 Common - hypothetical protein BCE_3143 4 None None None 42784101 Common - hypothetical protein BCE_5055 32 None None None 42779219 Common rplQ 50S ribosomal protein L17 BCE_0138 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 42782783 Common - hypothetical protein BCE_3733 36 COG4100 COG4100, Cystathionine beta-lyase family protein involved in aluminum resistance Inorganic ion transport and metabolism 42779150 Common pabC 4-amino-4-deoxychorismate lyase BCE_0069 195 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 42779909 Common - hypothetical protein BCE_0833 4 None None None 42784296 Common - stage V sporulation protein AD BCE_5250 15 None None None 42783022 Pathogen - hypothetical protein BCE_3974 1 None None None 42783250 Pathogen - hypothetical protein BCE_4204 1 None None None 42784446 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase BCE_5401 186 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 42780099 Pathogen - hypothetical protein BCE_1023 1 None None None 42780353 Pathogen - hypothetical protein BCE_1279 1 None None None 42784043 Common - hypothetical protein BCE_4997 1 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 42783002 Common - cell division protein FtsQ BCE_3954 18 COG1589 FtsQ, Cell division septal protein Cell envelope biogenesis, outer membrane 42784057 Common - N-acylamino acid racemase BCE_5011 139 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 42779207 Common rplR 50S ribosomal protein L18 BCE_0126 217 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 42782760 Common - N-acetylmuramoyl-L-alanine amidase, family 2 BCE_3710 21 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42782521 Common - alcohol dehydrogenase, zinc-containing BCE_3470 153 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42783267 Common - hypothetical protein BCE_4221 96 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 42779724 Common - transcriptional regulator, GntR family BCE_0646 167 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42780954 Common - hypothetical protein BCE_1885 7 None None None 42781506 Common - chloramphenicol acetyltransferase BCE_2444 20 COG4845 COG4845, Chloramphenicol O-acetyltransferase Defense mechanisms 42784340 Common secA preprotein translocase subunit SecA BCE_5295 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 42782946 Common - fatty acid biosynthesis transcriptional regulator BCE_3896 17 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 42781883 Common - hypothetical protein BCE_2826 85 COG1262 COG1262, Uncharacterized conserved protein Function unknown 42784591 Common - response regulator, putative BCE_5546 104 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 42779795 Common - dihydrofolate reductase family protein BCE_0717 76 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 42780053 Common - hypothetical protein BCE_0977 8 None None None 42783012 Common mraW S-adenosyl-methyltransferase MraW BCE_3964 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 42783545 Common - hypothetical protein BCE_4499 69 COG2323 COG2323, Predicted membrane protein Function unknown 42780149 Common - hypothetical protein BCE_1073 25 COG1695 COG1695, Predicted transcriptional regulators Transcription 42779886 Common kdpA potassium-transporting ATPase subunit A BCE_0809 96 COG2060 KdpA, K+-transporting ATPase, A chain Inorganic ion transport and metabolism 42784582 Common - hydrolase, haloacid dehalogenase-like family BCE_5537 69 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 42784456 Common spoIID stage II sporulation protein D BCE_5411 47 COG2385 SpoIID, Sporulation protein and related proteins Cell division and chromosome partitioning 42780284 Common - cytotoxin K BCE_1209 3 None None None 42782627 Pathogen - hypothetical protein BCE_3577 1 None None None 42780304 Common aceA isocitrate lyase BCE_1229 128 COG2224 AceA, Isocitrate lyase Energy production and conversion 42782211 Pathogen - D,D-carboxypeptidase, putative BCE_3156 1 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42784390 Common - hypothetical protein BCE_5345 20 COG2389 COG2389, Uncharacterized metal-binding protein General function prediction only 42781576 Common - hypothetical protein BCE_2514 104 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 42781338 Pathogen - hypothetical protein BCE_2274 1 None None None 42782860 Common - renal dipeptidase family protein BCE_3810 104 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 42780188 Pathogen - lipoprotein, putative BCE_1112 1 None None None 42780599 Common hisG ATP phosphoribosyltransferase catalytic subunit BCE_1525 209 COG0040 HisG, ATP phosphoribosyltransferase Amino acid transport and metabolism 42779603 Common - ribonuclease BN, putative BCE_0523 77 COG1295 Rbn, Predicted membrane protein Function unknown 42781892 Pathogen - hypothetical protein BCE_2835 1 None None None 42779910 Common - hypothetical protein BCE_0834 6 COG0727 COG0727, Predicted Fe-S-cluster oxidoreductase General function prediction only 42782500 Common - ABC transporter, ATP-binding protein BCE_3447 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42780025 Common - hypothetical protein BCE_0949 6 None None None 42781616 Pathogen - hypothetical protein BCE_2555 1 None None None 42781966 Common cotX spore coat protein X (insoluble fraction) BCE_2910 2 None None None 42779737 Common ald alanine dehydrogenase BCE_0659 168 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 42783405 Common - transcriptional regulator, Fur family BCE_4359 174 COG0735 Fur, Fe2+/Zn2+ uptake regulation proteins Inorganic ion transport and metabolism 42779634 Common - PTS system, N-acetylglucosamine-specific IIBC component, putative BCE_0554 51 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 42781710 Pathogen - hypothetical protein BCE_2651 1 None None None 42783918 Pathogen - hypothetical protein BCE_4872 1 None None None 42780894 Common - hypothetical protein BCE_1823 1 None None None 42781352 Common - isochorismatase family protein BCE_2288 116 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42783842 Common tyrS tyrosyl-tRNA synthetase BCE_4796 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42779954 Common - Na/Pi-cotransporter family protein BCE_0878 137 COG1283 NptA, Na+/phosphate symporter Inorganic ion transport and metabolism 42782773 Common - phosphonate ABC transporter, phosphonate-binding protein, putative BCE_3723 87 COG3221 PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component Inorganic ion transport and metabolism 42779760 Common - proton/peptide symporter family protein BCE_0682 80 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 42781848 Pathogen - hypothetical protein BCE_2791 1 None None None 42784550 Common - hypothetical protein BCE_5505 4 None None None 42783402 Common - hypothetical protein BCE_4356 5 COG5521 COG5521, Predicted integral membrane protein Function unknown 42784081 Common - hypothetical protein BCE_5035 49 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 42783916 Pathogen - hypothetical protein BCE_4870 1 None None None 42783200 Common pyn pyrimidine-nucleoside phosphorylase BCE_4154 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 42783377 Common murG N-acetylglucosaminyl transferase BCE_4331 210 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 42783155 Pathogen - hypothetical protein BCE_4108 1 None None None 42783616 Common - hypothetical protein BCE_4570 4 None None None 42781953 Common - bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase BCE_2897 122 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 42784423 Common - sensor histidine kinase BCE_5378 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42780811 Common - hypothetical protein BCE_1737 14 COG0730 COG0730, Predicted permeases General function prediction only 42783048 Common - hypothetical protein BCE_4000 5 COG4896 COG4896, Uncharacterized protein conserved in bacteria Function unknown 42783870 Common - acetyltransferase, GNAT family BCE_4824 19 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 42779171 Common - hypothetical protein BCE_0090 36 COG1939 COG1939, Uncharacterized protein conserved in bacteria Function unknown 42779936 Common - extracellular metalloprotease protein BCE_0860 20 COG3591 COG3591, V8-like Glu-specific endopeptidase Amino acid transport and metabolism 42781773 Pathogen - hypothetical protein BCE_2716 1 None None None 42782486 Pathogen - oxidoreductase, short chain dehydrogenase/reductase family BCE_3433 1 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42782248 Common - hypothetical protein BCE_3193 6 COG5609 COG5609, Uncharacterized conserved protein Function unknown 42782073 Common - autoinducer-2 (AI-2) kinase BCE_3017 177 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 42779635 Common - penicillin-binding protein, putative BCE_0555 149 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42781540 Pathogen - hypothetical protein BCE_2478 1 None None None 42781658 Pathogen - hypothetical protein BCE_2598 1 None None None 42780239 Common - hypothetical protein BCE_1164 37 COG3428 COG3428, Predicted membrane protein Function unknown 42780035 Common - 3-methyladenine DNA glycosylase BCE_0959 82 COG2094 Mpg, 3-methyladenine DNA glycosylase DNA replication, recombination, and repair 42782296 Pathogen - hypothetical protein BCE_3241 1 None None None 42780205 Pathogen - hypothetical protein BCE_1129 1 None None None 42780294 Common - CAAX amino terminal protease family protein BCE_1219 6 None None None 42780389 Pathogen - hypothetical protein BCE_1315 1 None None None 42779734 Common - hypothetical protein BCE_0656 7 COG2427 COG2427, Uncharacterized conserved protein Function unknown 42781677 Common - sensor histidine kinase, putative BCE_2618 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 161511029 Common ilvH acetolactate synthase 3 regulatory subunit BCE_1518 191 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 42781014 Common - hydrolase, alpha/beta fold family BCE_1945 84 COG2267 PldB, Lysophospholipase Lipid metabolism 42779646 Pathogen - hypothetical protein BCE_0566 1 None None None 42781091 Common cydB cytochrome d ubiquinol oxidase, subunit II BCE_2022 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 42784625 Common - hypothetical protein BCE_5580 34 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42780264 Common - lipoate-protein ligase A, putative BCE_1189 86 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 42783319 Common - hypothetical protein BCE_4273 3 None None None 42783054 Common - hypothetical protein BCE_4006 3 None None None 42780921 Pathogen - hypothetical protein BCE_1851 1 None None None 42781206 Common - acetyltransferase, GNAT family BCE_2140 65 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783721 Pathogen - hypothetical protein BCE_4675 1 None None None 42783732 Common pheT phenylalanyl-tRNA synthetase subunit beta BCE_4686 248 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 42780625 Common - precorrin-2 dehydrogenase BCE_1551 109 COG1648 CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) Coenzyme metabolism 42782343 Common - hypothetical protein BCE_3290 2 None None None 42779319 Common - lipoprotein, putative BCE_0238 2 None None None 42781957 Pathogen - glycosyl transferase, WecB/TagA/CpsF family BCE_2901 1 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 42781184 Common - polysaccharide biosynthesis family protein BCE_2118 46 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42783992 Common luxS S-ribosylhomocysteinase BCE_4946 55 COG1854 LuxS, LuxS protein involved in autoinducer AI2 synthesis Signal transduction mechanisms 42780170 Pathogen - hypothetical protein BCE_1094 1 None None None 42779450 Common - restriction endonuclease, putative BCE_0369 4 None None None 42782844 Common - serine protease, subtilase family BCE_3794 24 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 42780525 Pathogen - hypothetical protein BCE_1451 1 None None None 42784035 Common - DNA-binding response regulator BCE_4989 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42781910 Common - peptidase M3 family protein BCE_2853 59 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42783590 Common mreB rod shape-determining protein MreB BCE_4544 235 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 42780614 Pathogen - hypothetical protein BCE_1540 1 None None None 42784218 Common - hypothetical protein BCE_5172 88 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 42779815 Common rbsB ribose ABC transporter, ribose-binding protein BCE_0737 126 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 42784034 Common - transcription regulator, ArsR family [imported] BCE_4988 159 COG0640 ArsR, Predicted transcriptional regulators Transcription 42780737 Common - hypothetical protein BCE_1663 49 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 42783452 Common comEC DNA internalization-related competence protein ComEC/Rec2 BCE_4406 211 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 42779793 Pathogen - hypothetical protein BCE_0715 1 None None None 42781007 Common ilvA threonine dehydratase BCE_1938 216 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 42781564 Common tdcB threonine dehydratase BCE_2502 204 COG1171 IlvA, Threonine dehydratase Amino acid transport and metabolism 42782590 Pathogen - hypothetical protein BCE_3540 1 None None None 42782082 Common - transcriptional regulator, ArsR family BCE_3026 1 COG1414 IclR, Transcriptional regulator Transcription 42780328 Common - fumarylacetoacetate hydrolase family protein BCE_1254 175 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 42783672 Common gerE germination protein GerE BCE_4626 27 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42780653 Pathogen - hypothetical protein BCE_1579 1 None None None 42781922 Common - sensory box sigma-54 dependent DNA-binding response regulator BCE_2865 173 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 42783083 Common - hypothetical protein BCE_4036 4 COG4703 COG4703, Uncharacterized protein conserved in bacteria Function unknown 42779716 Common - hypothetical protein BCE_0637 6 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 42779159 Common ctsR transcriptional regulator CtsR BCE_0078 22 COG4463 CtsR, Transcriptional repressor of class III stress genes Transcription 42783854 Common mscL large conductance mechanosensitive channel protein BCE_4808 142 COG1970 MscL, Large-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 42781057 Common - ABC transporter, ATP-binding protein BCE_1988 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42780565 Pathogen - hypothetical protein BCE_1491 1 None None None 42783551 Common ruvB Holliday junction DNA helicase B BCE_4505 227 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 42780537 Pathogen - hypothetical protein BCE_1463 1 None None None 42779667 Common - ABC transporter, ATP-binding protein BCE_0587 249 COG4586 COG4586, ABC-type uncharacterized transport system, ATPase component General function prediction only 42782106 Common - hypothetical protein BCE_3050 3 None None None 42780330 Common rocD ornithine--oxo-acid transaminase BCE_1256 237 COG4992 ArgD, Ornithine/acetylornithine aminotransferase Amino acid transport and metabolism 42781008 Pathogen - hypothetical protein BCE_1939 1 None None None 42779320 Common - hypothetical protein BCE_0239 10 COG5298 COG5298, Uncharacterized protein conserved in bacteria Function unknown 42780395 Common ppnK inorganic polyphosphate/ATP-NAD kinase BCE_1321 223 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 42782419 Pathogen - hypothetical protein BCE_3366 1 None None None 42779834 Pathogen - putative ribosomal protein L5-like protein BCE_0756 1 None None None 42780889 Pathogen - hypothetical protein BCE_1818 1 None None None 42780909 Common - hypothetical protein BCE_1839 9 None None None 42780345 Common - DNA-binding protein BCE_1271 10 None None None 42780644 Common - hypothetical protein BCE_1570 78 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 42779551 Common argR arginine repressor BCE_0471 50 COG1438 ArgR, Arginine repressor Transcription 42779567 Common thiE thiamine-phosphate pyrophosphorylase BCE_0487 197 COG0352 ThiE, Thiamine monophosphate synthase Coenzyme metabolism 42783705 Pathogen - hypothetical protein BCE_4659 1 None None None 42780442 Common - hypothetical protein BCE_1368 3 None None None 42780411 Common rfbB dTDP-glucose 4,6-dehydratase BCE_1337 232 COG1088 RfbB, dTDP-D-glucose 4,6-dehydratase Cell envelope biogenesis, outer membrane 42782673 Pathogen - hypothetical protein BCE_3623 1 None None None 42781841 Common - hypothetical protein BCE_2784 73 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42780701 Common - hypothetical protein BCE_1627 1 None None None 42779675 Common - hypothetical protein BCE_0595 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 42780885 Common - metallo-beta-lactamase family protein BCE_1814 122 COG1236 YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing Translation, ribosomal structure and biogenesis 42783792 Pathogen - hypothetical protein BCE_4746 1 None None None 42782947 Common recG ATP-dependent DNA helicase RecG BCE_3897 210 COG1200 RecG, RecG-like helicase DNA replication, recombination, and repair / Transcription 42779370 Common - chaperonin family protein BCE_0289 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 42779647 Pathogen - hypothetical protein BCE_0567 1 None None None 42782839 Common - transcriptional regulator, GntR family/aminotransferase, class I protein BCE_3789 233 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42781344 Common asnO asparagine synthetase, glutamine-hydrolyzing BCE_2280 171 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 42784667 Common - hypothetical protein BCE_5622 19 COG4241 COG4241, Predicted membrane protein Function unknown 42782733 Common - thiJ/pfpI family protein BCE_3683 69 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 42782649 Common - hypothetical protein BCE_3599 1 None None None 42780472 Common potA spermidine/putrescine ABC transporter, ATP-binding protein BCE_1398 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 42781466 Common - mbtH-like protein BCE_2403 35 COG3251 COG3251, Uncharacterized protein conserved in bacteria Function unknown 42782149 Common - transcriptional regulator, GntR family/aminotransferase, class I protein BCE_3093 235 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42784335 Common ftsX cell division ABC transporter, permease protein FtsX BCE_5289 105 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 42781304 Common - hypothetical protein BCE_2239 3 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42779682 Common - RNA methyltransferase, TrmH family, group 2 BCE_0602 168 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 42781042 Pathogen - hypothetical protein BCE_1973 1 None None None 42782652 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_3602 189 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42781154 Common - methyl-accepting chemotaxis protein BCE_2088 164 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42783681 Common - hypothetical protein BCE_4635 42 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 42782412 Pathogen - hypothetical protein BCE_3359 1 None None None 42783597 Common - stage VI sporulation protein D, putative BCE_4551 3 None None None 42782395 Pathogen - hypothetical protein BCE_3342 1 None None None 42784366 Common celA PTS system, cellobiose-specific IIB component BCE_5321 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 42780500 Pathogen - phaP protein BCE_1426 1 COG1463 Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component Secondary metabolites biosynthesis, transport, and catabolism 42781126 Common - lipoprotein, putative BCE_2058 3 None None None 42781448 Pathogen - hypothetical protein BCE_2385 1 None None None 42784549 Common - penicillin-binding protein BCE_5504 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 42783128 Common - hypothetical protein BCE_4081 2 COG4858 COG4858, Uncharacterized membrane-bound protein conserved in bacteria Function unknown 42782961 Common coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase BCE_3912 234 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 42782765 Common - ABC transporter, ATP-binding/permease protein BCE_3715 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42780832 Common flgL flagellar hook-associated protein FlgL BCE_1759 98 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 42781146 Common - oxidoreductase, aldo/keto reductase family BCE_2080 207 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 42782352 Pathogen - hypothetical protein BCE_3299 1 None None None 42781682 Pathogen - hypothetical protein BCE_2623 1 None None None 42780596 Common leuC isopropylmalate isomerase large subunit BCE_1522 223 COG0065 LeuC, 3-isopropylmalate dehydratase large subunit Amino acid transport and metabolism 42780636 Common - sensor histidine kinase BCE_1562 144 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 42784204 Pathogen - hypothetical protein BCE_5158 1 None None None 42783729 Pathogen - hypothetical protein BCE_4683 1 None None None 42783432 Common - sporulation protein BCE_4386 15 None None None 42779367 Common - lipoprotein, putative BCE_0286 2 None None None 42780857 Common - flagellar motor switch protein BCE_1784 110 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 42782124 Pathogen - hypothetical protein BCE_3068 1 None None None 42781457 Pathogen - hypothetical protein BCE_2394 1 None None None 42781623 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_2562 146 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42783777 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha BCE_4731 182 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 42784443 Common - capsular exopolysaccharide family protein BCE_5398 187 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 42780150 Common - hypothetical protein BCE_1074 5 None None None 42783566 Pathogen - hypothetical protein BCE_4520 1 None None None 42784318 Common uvrB excinuclease ABC subunit B BCE_5272 231 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 42782169 Pathogen - hypothetical protein BCE_3114 1 None None None 42784231 Common - transcriptional regulator, MarR family BCE_5185 27 COG1846 MarR, Transcriptional regulators Transcription 42783927 Common - hypothetical protein BCE_4881 5 COG0456 RimI, Acetyltransferases General function prediction only 42780464 Common - spore coat-associated protein BCE_1390 2 None None None 42780064 Common - Tn554-related, transposase C BCE_0988 8 None None None 42782840 Pathogen - hypothetical protein BCE_3790 1 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 42780040 Common - coproporphyrinogen III oxidase BCE_0964 206 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 42780601 Common hisB imidazoleglycerol-phosphate dehydratase BCE_1527 213 COG0131 HisB, Imidazoleglycerol-phosphate dehydratase Amino acid transport and metabolism 42780513 Common phnX phosphonoacetaldehyde phosphonohydrolase BCE_1439 39 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 42781120 Common thrC threonine synthase BCE_2052 224 COG0498 ThrC, Threonine synthase Amino acid transport and metabolism 42782313 Pathogen - hypothetical protein BCE_3258 1 None None None 42783461 Common aroE shikimate 5-dehydrogenase BCE_4415 225 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 42783699 Common fadD acyl-CoA synthetase BCE_4653 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42784478 Common atpH F0F1 ATP synthase subunit delta BCE_5433 188 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 42782989 Common divIVA cell-division initiation protein DivIVA BCE_3941 47 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 42779521 Common ahpC alkyl hydroperoxide reductase, subunit C BCE_0440 215 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 42779959 Common celA PTS system, cellobiose-specific IIB component BCE_0883 31 COG1440 CelA, Phosphotransferase system cellobiose-specific component IIB Carbohydrate transport and metabolism 42780760 Common - hypothetical protein BCE_1686 2 None None None 42780382 Pathogen - hypothetical protein BCE_1308 1 None None None 42780425 Common - lipoprotein, putative BCE_1351 7 None None None 42782744 Common - ccdC protein BCE_3694 6 COG4846 CcdC, Membrane protein involved in cytochrome C biogenesis Posttranslational modification, protein turnover, chaperones 42781832 Common - hypothetical protein BCE_2775 41 COG3797 COG3797, Uncharacterized protein conserved in bacteria Function unknown 42781854 Common - acetyltransferase, GNAT family BCE_2797 63 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780432 Common trpD anthranilate phosphoribosyltransferase BCE_1358 218 COG0547 TrpD, Anthranilate phosphoribosyltransferase Amino acid transport and metabolism 42783197 Common - hypothetical protein BCE_4151 93 COG2968 COG2968, Uncharacterized conserved protein Function unknown 42780456 Common - hypothetical protein BCE_1382 2 None None None 42781391 Common - hypothetical protein BCE_2328 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 42779560 Common - hypothetical protein BCE_0480 33 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 42780240 Common - hypothetical protein BCE_1165 22 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 42780659 Pathogen - hypothetical protein BCE_1585 1 None None None 42781689 Pathogen - hypothetical protein BCE_2630 1 None None None 42782597 Common - amino acid ABC transproter permease protein BCE_3547 175 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42784534 Pathogen - hypothetical protein BCE_5489 1 None None None 42780683 Common - ATP-dependent DNA helicase BCE_1609 174 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 42779613 Common - general stress protein 26 BCE_0533 15 COG3871 COG3871, Uncharacterized stress protein (general stress protein 26) General function prediction only 42782976 Common pyrF orotidine 5'-phosphate decarboxylase BCE_3928 163 COG0284 PyrF, Orotidine-5'-phosphate decarboxylase Nucleotide transport and metabolism 42782456 Pathogen - hypothetical protein BCE_3403 1 None None None 42783572 Common - ABC transporter, permease protein BCE_4526 17 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42781760 Common - acetyltransferase, GNAT family BCE_2702 15 COG0456 RimI, Acetyltransferases General function prediction only 42780262 Common - hypothetical protein BCE_1187 2 None None None 42781461 Common entA 2,3-dihydroxybenzoate-2,3-dehydrogenase BCE_2398 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42783028 Common ylbF ComK regulator BCE_3980 7 COG3679 COG3679, Uncharacterized conserved protein Function unknown 42781108 Common - ABC transporter, ATP-binding/permease protein BCE_2040 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42781384 Pathogen - hypothetical protein BCE_2320 1 None None None 42779112 Common - DNA replication intiation control protein YabA BCE_0031 17 COG4467 COG4467, Uncharacterized protein conserved in bacteria Function unknown 42783728 Common rnh ribonuclease HIII BCE_4682 40 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 42780495 Common - formate/nitrite transporter family protein BCE_1421 96 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 42780140 Pathogen - hypothetical protein BCE_1064 1 None None None 42781752 Common - hydrolase, alpha/beta hydrolase fold family, putative BCE_2694 67 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783933 Common - ABC transporter, permease protein, putative BCE_4887 18 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42779592 Common - ROK family protein BCE_0512 161 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 42784187 Common - metallo-beta-lactamase family protein BCE_5141 100 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42783803 Pathogen - hypothetical protein BCE_4757 1 None None None 42779193 Common rplW 50S ribosomal protein L23 BCE_0112 180 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 42780580 Common - transcriptional regulator, MarR family BCE_1506 10 COG1846 MarR, Transcriptional regulators Transcription 42783781 Common dnaE DNA polymerase III DnaE BCE_4735 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 42780989 Common - acetyltransferase, GNAT family BCE_1920 28 COG3981 COG3981, Predicted acetyltransferase General function prediction only 42780723 Common qcrA menaquinol-cytochrome c reductase, iron-sulfur subunit BCE_1649 54 COG0723 QcrA, Rieske Fe-S protein Energy production and conversion 42779244 Pathogen - hypothetical protein BCE_0163 3 None None None 42779867 Pathogen - hypothetical protein BCE_0790 1 None None None 42781759 Pathogen - hypothetical protein BCE_2701 1 None None None 42780668 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_1594 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42779778 Common treC trehalose-6-phosphate hydrolase BCE_0700 160 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 42780715 Common hepT heptaprenyl diphosphate synthase component II BCE_1641 243 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 42782239 Common - deoxyribodipyrimidine photolyase family protein BCE_3184 134 COG0415 PhrB, Deoxyribodipyrimidine photolyase DNA replication, recombination, and repair 42780786 Pathogen - hypothetical protein BCE_1712 1 None None None 42779615 Common cax calcium/proton exchanger BCE_0535 21 COG0387 ChaA, Ca2+/H+ antiporter Inorganic ion transport and metabolism 42782042 Common - hypothetical protein BCE_2986 56 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 42783068 Common pdhA pyruvate dehydrogenase complex E1 component, alpha subunit BCE_4021 153 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 42779351 Common acpS holo-(acyl-carrier-protein) synthase BCE_0270 165 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 42782033 Common - hypothetical protein BCE_2977 6 COG1669 COG1669, Predicted nucleotidyltransferases General function prediction only 42781666 Pathogen - hypothetical protein BCE_2606 1 None None None 42782010 Pathogen - hypothetical protein BCE_2954 1 None None None 42784150 Common - transcriptional activator tipA, putative BCE_5104 118 COG0789 SoxR, Predicted transcriptional regulators Transcription 42783839 Common rpsD 30S ribosomal protein S4 BCE_4793 243 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 42781199 Common brnQ branched-chain amino acid transport system II carrier protein BCE_2133 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42783749 Common - hypothetical protein BCE_4703 8 COG4508 COG4508, Uncharacterized protein conserved in bacteria Function unknown 42782373 Pathogen - hypothetical protein BCE_3320 1 None None None 42784193 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_5147 153 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42782405 Common pykA pyruvate kinase BCE_3352 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 42782583 Common - transcription regulator MarR-like protein BCE_3532 34 COG1846 MarR, Transcriptional regulators Transcription 42783439 Common prmA ribosomal protein L11 methyltransferase BCE_4393 188 COG2264 PrmA, Ribosomal protein L11 methylase Translation, ribosomal structure and biogenesis 42780968 Common - extracellular solute-binding protein, putative BCE_1899 98 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 42782019 Common - transcriptional regulator, TetR family BCE_2963 51 COG1309 AcrR, Transcriptional regulator Transcription 42784451 Pathogen - hypothetical protein BCE_5406 1 None None None 42779182 Common - ybxB protein BCE_0101 72 COG2813 RsmC, 16S RNA G1207 methylase RsmC Translation, ribosomal structure and biogenesis 42780665 Common - hypothetical protein BCE_1591 2 None None None 42783284 Common yqiS phosphate butyryltransferase BCE_4238 144 COG0280 Pta, Phosphotransacetylase Energy production and conversion 42780981 Common - hypothetical protein BCE_1912 5 None None None 42783078 Common - transcriptional regulator, LysR family BCE_4031 192 COG0583 LysR, Transcriptional regulator Transcription 42783909 Common mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB BCE_4863 96 COG1763 MobB, Molybdopterin-guanine dinucleotide biosynthesis protein Coenzyme metabolism 42784254 Common - hypothetical protein BCE_5208 150 COG1733 COG1733, Predicted transcriptional regulators Transcription 42784466 Common nuoH NADH dehydrogenase subunit H BCE_5421 191 COG1005 NuoH, NADH:ubiquinone oxidoreductase subunit 1 (chain H) Energy production and conversion 42784525 Pathogen papR PlcR associated protein PapR BCE_5480 1 None None None 42782232 Pathogen - hypothetical protein BCE_3177 1 None None None 42781552 Common - O-methyltransferase family protein BCE_2490 100 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 42783519 Common - hypothetical protein BCE_4473 158 COG0628 PerM, Predicted permease General function prediction only 42783237 Pathogen - hypothetical protein BCE_4191 1 None None None 42779324 Pathogen - hypothetical protein BCE_0243 1 None None None 42779874 Common - ABC transporter, permease protein, putative BCE_0797 184 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 42782302 Common - hypothetical protein BCE_3247 49 COG2085 COG2085, Predicted dinucleotide-binding enzymes General function prediction only 42783920 Common gerHA spore germination protein GerHA BCE_4874 16 COG5271 MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain General function prediction only 42781073 Pathogen - hypothetical protein BCE_2004 1 None None None 42780449 Common - hypothetical protein BCE_1375 79 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42779262 Pathogen - hypothetical protein BCE_0181 1 None None None 42782913 Common cdsA phosphatidate cytidylyltransferase BCE_3863 215 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 42782890 Common spoVFA dipicolinate synthase subunit A BCE_3840 14 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 42780218 Common - DnaJ domain protein BCE_1143 3 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 42779426 Pathogen - hypothetical protein BCE_0345 1 None None None 42783230 Common bioB biotin synthase BCE_4184 182 COG0502 BioB, Biotin synthase and related enzymes Coenzyme metabolism 42779250 Pathogen - hypothetical protein BCE_0169 1 None None None 42779657 Common mutY A/G-specific adenine glycosylase BCE_0577 236 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 42780948 Pathogen - hypothetical protein BCE_1879 1 None None None 42781532 Common - transposase, IS605 OrfB family BCE_2470 26 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42784133 Pathogen - hypothetical protein BCE_5087 1 None None None 42783309 Common spoIIIAD stage III sporulation protein AD BCE_4263 15 None None None 42781368 Common gnd 6-phosphogluconate dehydrogenase-like protein BCE_2304 181 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 42781902 Pathogen - hypothetical protein BCE_2845 1 None None None 42782790 Common hfq RNA-binding protein Hfq BCE_3740 127 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 42781447 Common - enoyl-CoA hydratase BCE_2384 167 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 42780846 Common flgE flagellar hook protein FlgE BCE_1773 126 COG1749 FlgE, Flagellar hook protein FlgE Cell motility and secretion 42781494 Pathogen - hypothetical protein BCE_2432 1 None None None 42781050 Common - hypothetical protein BCE_1981 11 COG4224 COG4224, Uncharacterized protein conserved in bacteria Function unknown 42782386 Pathogen - probable glycoprotein, putative BCE_3333 1 None None None 42781170 Pathogen - hypothetical protein BCE_2104 1 None None None 42779869 Pathogen - hypothetical protein BCE_0792 1 None None None 42780719 Common hisC histidinol-phosphate aminotransferase BCE_1645 239 COG0079 HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase Amino acid transport and metabolism 42779537 Common - hypothetical protein BCE_0457 2 None None None 42780117 Pathogen - hypothetical protein BCE_1041 1 None None None 42781181 Common cotH spore coat protein H BCE_2115 19 COG5337 CotH, Spore coat assembly protein Cell envelope biogenesis, outer membrane 42783049 Common - hypothetical protein BCE_4001 2 None None None 42781139 Common - protease, putative BCE_2073 9 COG5279 CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain Cell division and chromosome partitioning 42781377 Common proV glycine betaine/L-proline ABC transporter, ATP-binding protein BCE_2313 249 COG1125 OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components Amino acid transport and metabolism 42783587 Common minC septum formation inhibitor BCE_4541 65 COG0850 MinC, Septum formation inhibitor Cell division and chromosome partitioning 42780041 Common - acyl-CoA synthetase BCE_0965 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42780196 Common - hydrolase, alpha/beta fold family BCE_1120 152 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42781211 Common - hypothetical protein BCE_2145 67 COG1585 COG1585, Membrane protein implicated in regulation of membrane protease activity Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 42781621 Common - hypothetical protein BCE_2560 2 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 42784006 Common - hypothetical protein BCE_4960 1 COG3766 COG3766, Predicted membrane protein Function unknown 42780691 Common gdhA glutamate dehydrogenase BCE_1617 179 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 42782332 Common - hypothetical protein BCE_3279 14 None None None 42782266 Pathogen - hypothetical protein BCE_3211 1 None None None 42783287 Common - glycerophosphoryl diester phosphodiesterase family protein BCE_4241 166 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 42780421 Common - acetyltransferase, GNAT family BCE_1347 88 COG2153 ElaA, Predicted acyltransferase General function prediction only 42781473 Common - alkaline serine protease, subtilase family BCE_2410 142 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 42780940 Common pyrH uridylate kinase BCE_1870 235 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 42779939 Pathogen - hypothetical protein BCE_0863 1 None None None 42782528 Common - drug resistance transporter, Bcr/CflA subfamily, inetrruption-N BCE_3477 192 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781797 Common - hypothetical protein BCE_2740 5 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 42781861 Common acoA TPP-dependent acetoin dehydrogenase E1 alpha-subunit BCE_2804 157 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 42782112 Common - major facilitator superfamily protein superfamily BCE_3056 165 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42784557 Common - iron compound ABC transporter, permease protein BCE_5512 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42780489 Common - transcriptional regulator, GntR family BCE_1415 140 COG2186 FadR, Transcriptional regulators Transcription 42784186 Common - transcriptional regulator, putative BCE_5140 32 COG1309 AcrR, Transcriptional regulator Transcription 42780672 Common resA thiol-disulfide oxidoreductase BCE_1598 213 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 42781786 Common - metal-dependent hydrolase BCE_2729 12 None None None 42781204 Pathogen - hypothetical protein BCE_2138 1 None None None 42781345 Pathogen - acetyltransferase, GNAT family BCE_2281 1 None None None 42782687 Common - polysaccharide deacetylase, putative BCE_3637 110 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42782512 Common - hypothetical protein BCE_3459 29 None None None 42782630 Common moaE molybdopterin converting factor, subunit 2 BCE_3580 160 COG0314 MoaE, Molybdopterin converting factor, large subunit Coenzyme metabolism 42780552 Pathogen - hypothetical protein BCE_1478 1 None None None 42781310 Common - sodium-dependent transporter, putative BCE_2246 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 42782852 Common mutL DNA mismatch repair protein BCE_3802 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 42781693 Pathogen - hypothetical protein BCE_2634 1 None None None 42779130 Common spoVC peptidyl-tRNA hydrolase BCE_0049 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 42783498 Pathogen - hypothetical protein BCE_4452 1 None None None 42783860 Pathogen - hypothetical protein BCE_4814 1 None None None 42780979 Common - transcriptional regulator, PadR family BCE_1910 28 COG1695 COG1695, Predicted transcriptional regulators Transcription 42780821 Common - chemotaxis response regulator BCE_1748 223 COG2201 CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain Cell motility and secretion / Signal transduction mechanisms 42781700 Pathogen - hypothetical protein BCE_2641 1 None None None 42783902 Common - hypothetical protein BCE_4856 1 None None None 42783544 Common spoVB stage V sporulation protein B BCE_4498 88 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42784127 Pathogen - hypothetical protein BCE_5081 1 None None None 42779922 Pathogen - hypothetical protein BCE_0846 1 None None None 42781738 Common - penicillin-binding protein BCE_2679 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42784326 Common - transcriptional regulator, LysR family BCE_5280 193 COG0583 LysR, Transcriptional regulator Transcription 42782018 Common - hypothetical protein BCE_2962 4 None None None 42782181 Common - acyl-CoA dehydrogenase, short-chain specific, putative BCE_3126 150 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 42784632 Common - hypothetical protein BCE_5587 21 COG4267 COG4267, Predicted membrane protein Function unknown 42780765 Pathogen - hypothetical protein BCE_1691 1 None None None 42783092 Common - hypothetical protein BCE_4045 3 None None None 42783580 Common rpmA 50S ribosomal protein L27 BCE_4534 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 42781970 Common - hypothetical protein BCE_2914 4 None None None 42784069 Pathogen - hypothetical protein BCE_5023 1 None None None 42779558 Pathogen - hypothetical protein BCE_0478 1 None None None 42784654 Common - hypothetical protein BCE_5609 2 None None None 42781952 Common - hypothetical protein BCE_2896 10 COG1647 COG1647, Esterase/lipase General function prediction only 42781758 Pathogen - hypothetical protein BCE_2700 1 None None None 42781175 Pathogen - hypothetical protein BCE_2109 1 None None None 42780324 Common gerPC spore germination protein GerPC BCE_1250 2 None None None 42782729 Common hutU urocanate hydratase BCE_3679 97 COG2987 HutU, Urocanate hydratase Amino acid transport and metabolism 42784126 Common phnA alkylphosphonate utilization operon protein PhnA BCE_5080 107 COG2824 PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism Inorganic ion transport and metabolism 42783954 Common - molybdopterin-guanine dinucleotide biosynthesis protein A, putative BCE_4908 121 COG0746 MobA, Molybdopterin-guanine dinucleotide biosynthesis protein A Coenzyme metabolism 42779597 Common - hypothetical protein BCE_0517 4 None None None 42782830 Common - glyoxylase family protein BCE_3780 12 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 42779625 Common rocR arginine utilization regulatory protein RocR BCE_0545 171 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 42779984 Pathogen - hypothetical protein BCE_0908 1 None None None 42780873 Common - hypothetical protein BCE_1801 19 COG0412 COG0412, Dienelactone hydrolase and related enzymes Secondary metabolites biosynthesis, transport, and catabolism 42780352 Common - cell wall-associated protein BCE_1278 44 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 42783137 Pathogen - hypothetical protein BCE_4090 1 None None None 42779431 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A BCE_0350 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 42782579 Common - hypothetical protein BCE_3528 13 None None None 42779503 Common - hypothetical protein BCE_0422 3 None None None 42781072 Common - hypothetical protein BCE_2003 29 COG3560 FMR2, Predicted oxidoreductase related to nitroreductase General function prediction only 42781439 Common mmgD citrate synthase 3 BCE_2376 194 COG0372 GltA, Citrate synthase Energy production and conversion 42782710 Common ureF urease accessory protein UreF BCE_3660 75 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 42779271 Pathogen - hypothetical protein BCE_0190 1 None None None 42783971 Pathogen - hypothetical protein BCE_4925 1 None None None 42783640 Common - germination protein gere-related protein BCE_4594 3 None None None 42782533 Common - arsenical pump family protein BCE_3482 131 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 42783522 Common - hypothetical protein BCE_4476 8 None None None 42783940 Common - ABC transporter, ATP-binding protein, putative BCE_4894 248 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42779444 Common - RNA methyltransferase, TrmA family BCE_0363 205 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 42779166 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BCE_0085 196 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 42780177 Common - sensor histidine kinase, putative BCE_1101 141 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 42779681 Common - hypothetical protein BCE_0601 12 None None None 42781268 Common - membrane-bound protease, putative BCE_2203 104 COG1305 COG1305, Transglutaminase-like enzymes, putative cysteine proteases Amino acid transport and metabolism 42781102 Common - microcin immunity protein MccF BCE_2033 82 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 42780611 Pathogen - hypothetical protein BCE_1537 1 None None None 42783181 Common spoVAF stage V sporulation protein AF BCE_4134 15 None None None 42783624 Pathogen - hypothetical protein BCE_4578 1 None None None 42781339 Common - hypothetical protein BCE_2275 2 None None None 42784587 Common thiD pyridoxal kinase BCE_5542 222 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 42779154 Common - DNA-binding protein BCE_0073 31 COG1476 COG1476, Predicted transcriptional regulators Transcription 42781082 Common - branched-chain amino acid ABC transporter, permease protein BCE_2013 146 COG0559 LivH, Branched-chain amino acid ABC-type transport system, permease components Amino acid transport and metabolism 42784284 Common eno phosphopyruvate hydratase BCE_5238 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 42782164 Pathogen - lipoprotein, putative BCE_3109 1 None None None 42780577 Pathogen - hypothetical protein BCE_1503 1 COG3832 COG3832, Uncharacterized conserved protein Function unknown 42780692 Pathogen - hypothetical protein BCE_1618 1 None None None 42783828 Pathogen - hypothetical protein BCE_4782 1 None None None 42782327 Common - hypothetical protein BCE_3273 41 COG2364 COG2364, Predicted membrane protein Function unknown 42780221 Pathogen - hypothetical protein BCE_1146 1 None None None 42780597 Common leuD isopropylmalate isomerase small subunit BCE_1523 211 COG0066 LeuD, 3-isopropylmalate dehydratase small subunit Amino acid transport and metabolism 42780916 Common - conserved hypothetical integral membrane protein, putative BCE_1846 179 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 42782481 Common - hypothetical protein BCE_3428 12 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42780279 Common - wall-associated domain protein BCE_1204 10 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 42780996 Common - fibronectin-binding protein, putative BCE_1927 7 None None None 42779189 Common tuf elongation factor Tu BCE_0108 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 42779226 Common - hypothetical protein BCE_0145 2 None None None 42781027 Common - peptidase, M23/M37 family BCE_1958 27 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 42784239 Pathogen - hypothetical protein BCE_5193 1 None None None 42780741 Pathogen - hypothetical protein BCE_1667 1 COG3794 PetE, Plastocyanin Energy production and conversion 42782542 Common - hypothetical protein BCE_3491 1 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 42779455 Common - rRNA biogenesis protein rrp5, putative BCE_0374 10 None None None 42782273 Common - permease, putative BCE_3218 121 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 42779332 Common - oligopeptide ABC transporter, ATP-binding protein BCE_0251 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 42782962 Common gmk guanylate kinase BCE_3914 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 42784122 Common - pyridine nucleotide-disulphide oxidoreductase BCE_5076 200 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 42781624 Common - sensor histidine kinase BCE_2563 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42783614 Pathogen - hypothetical protein BCE_4568 1 None None None 42779962 Common - hypothetical protein BCE_0886 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 42782048 Pathogen - hypothetical protein BCE_2992 1 None None None 42782869 Common - hypothetical protein BCE_3819 7 None None None 42779801 Pathogen - hypothetical protein BCE_0723 1 None None None 42781318 Common - hypothetical protein BCE_2254 97 COG1720 COG1720, Uncharacterized conserved protein Function unknown 42784402 Pathogen - hypothetical protein BCE_5357 1 None None None 42784615 Common - hypothetical protein BCE_5570 10 COG0628 PerM, Predicted permease General function prediction only 42780028 Common - hypothetical protein BCE_0952 25 COG4399 COG4399, Uncharacterized protein conserved in bacteria Function unknown 42779252 Pathogen - hypothetical protein BCE_0171 1 None None None 42779670 Common - potassium channel protein, putative BCE_0590 6 None None None 42781407 Common - thioredoxin family protein BCE_2344 174 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 42784564 Common cwlJ cell wall hydrolase BCE_5519 6 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 42782999 Common ftsZ cell division protein FtsZ BCE_3951 232 COG0206 FtsZ, Cell division GTPase Cell division and chromosome partitioning 42781250 Pathogen - hypothetical protein BCE_2184 1 None None None 42779761 Common - iron compound ABC transporter, iron compound-binding protein BCE_0683 82 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42781367 Common gntB gluconate transporter, permease protein BCE_2303 80 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 42782639 Common - spore germination protein BCE_3589 15 None None None 42779549 Common - amino acid ABC transporter, ATP-binding protein BCE_0469 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 42784401 Common - glycosyl transferase domain protein, putative BCE_5356 178 COG1215 COG1215, Glycosyltransferases, probably involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42781109 Common - DNA-binding response regulator BCE_2041 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42780755 Pathogen - hypothetical protein BCE_1681 1 None None None 42781038 Pathogen nheB non-hemolytic enterotoxin B BCE_1969 2 None None None 42779822 Common plC phospholipase C BCE_0744 6 None None None 42782195 Common - metallo-beta-lactamase family protein BCE_3140 121 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42783802 Pathogen - hypothetical protein BCE_4756 1 None None None 42781992 Pathogen - hypothetical protein BCE_2936 1 None None None 42784010 Pathogen - hypothetical protein BCE_4964 1 None None None 42779744 Pathogen - hypothetical protein BCE_0666 1 None None None 42782203 Common - Tn554-related, transposase B BCE_3148 79 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42779991 Common - hypothetical protein BCE_0915 17 COG3589 COG3589, Uncharacterized conserved protein Function unknown 42784001 Common - hypothetical protein BCE_4955 59 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42783538 Common apt adenine phosphoribosyltransferase BCE_4492 180 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 42784640 Pathogen - hypothetical protein BCE_5595 1 None None None 42780761 Common - spore coat protein D, putative BCE_1687 2 None None None 42783474 Pathogen - hypothetical protein BCE_4428 1 None None None 42779507 Common - hypothetical protein BCE_0426 208 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 42783365 Common comGC comG operon protein 3 BCE_4319 5 COG4537 ComGC, Competence protein ComGC Intracellular trafficking and secretion 42783977 Pathogen - hypothetical protein BCE_4931 1 None None None 42780518 Common - internalin, putative BCE_1444 55 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 42781609 Common - acyl-CoA dehydrogenase BCE_2548 169 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 42780579 Pathogen - hypothetical protein BCE_1505 1 None None None 42781481 Common thrS threonyl-tRNA synthetase BCE_2419 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42781357 Common - DNA-binding response regulator, LuxR family BCE_2293 222 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42784041 Pathogen - hypothetical protein BCE_4995 1 None None None 42779477 Common - hypothetical protein BCE_0396 5 None None None 42781592 Common - acyltransferase, putative BCE_2531 87 COG1835 COG1835, Predicted acyltransferases Lipid metabolism 42783227 Common ribBA bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein BCE_4181 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 42783727 Common - hypothetical protein BCE_4681 13 COG3027 COG3027, Uncharacterized protein conserved in bacteria Function unknown 42782426 Common - ROK family protein BCE_3373 82 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 42782175 Common - urea amidolyase-related protein BCE_3120 115 COG1984 DUR1, Allophanate hydrolase subunit 2 Amino acid transport and metabolism 42782358 Common - major facilitator family transporter BCE_3305 184 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779705 Common - ankyrin repeat domain protein BCE_0626 102 COG0666 Arp, FOG: Ankyrin repeat General function prediction only 42779945 Common - rhodanese-like domain protein BCE_0869 157 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 42783441 Common dnaK molecular chaperone DnaK BCE_4395 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 42784355 Pathogen - hypothetical protein BCE_5310 1 None None None 42782815 Common gpmA phosphoglycerate mutase BCE_3765 160 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 42783351 Common gcvT glycine cleavage system aminomethyltransferase T BCE_4305 179 COG0404 GcvT, Glycine cleavage system T protein (aminomethyltransferase) Amino acid transport and metabolism 42779854 Common - hypothetical protein BCE_0776 6 None None None 42783144 Pathogen - hypothetical protein BCE_4097 1 None None None 42780125 Common - vanZ protein, putative BCE_1049 10 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 42782805 Common - formate transporter, putative BCE_3755 99 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 42783035 Common - hypothetical protein BCE_3987 20 COG3336 COG3336, Predicted membrane protein Function unknown 42783236 Pathogen - hypothetical protein BCE_4190 1 None None None 42782246 Common ndhF NADH dehydrogenase subunit 5 BCE_3191 204 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 42782953 Common - ribosome-associated GTPase BCE_3903 163 COG1162 COG1162, Predicted GTPases General function prediction only 42783471 Common - hypothetical protein BCE_4425 111 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 42779758 Common - transcriptional regulator, ArsR family BCE_0680 16 COG0640 ArsR, Predicted transcriptional regulators Transcription 42783659 Common - Helix-turn-helix domain protein BCE_4613 3 COG1396 HipB, Predicted transcriptional regulators Transcription 42781281 Pathogen - hypothetical protein BCE_2216 1 None None None 42781509 Common - acetyltransferase, GNAT family BCE_2447 69 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42779488 Common - hypothetical protein BCE_0407 6 None None None 42779492 Common - hypothetical protein BCE_0411 5 None None None 42782699 Common alkK medium-chain-fatty-acid--CoA ligase BCE_3649 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42779445 Common - phage repressor BCE_0364 4 COG1396 HipB, Predicted transcriptional regulators Transcription 42783508 Common udk uridine kinase BCE_4462 88 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 42784647 Pathogen - hypothetical protein BCE_5602 1 None None None 42780871 Common - hypothetical protein BCE_1799 1 None None None 42783768 Common - maoC like domain protein BCE_4722 62 COG2030 MaoC, Acyl dehydratase Lipid metabolism 42781655 Common - hypothetical protein BCE_2594 14 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42779818 Common - immune inhibitor A metalloprotease BCE_0740 19 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 42783761 Common coaE dephospho-CoA kinase BCE_4715 210 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 42782013 Pathogen - hypothetical protein BCE_2957 1 None None None 42780301 Common - S-layer protein, putative BCE_1226 23 None None None 42782335 Common - hypothetical protein BCE_3282 4 None None None 42783944 Common - ABC1 family protein BCE_4898 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 42782874 Common - sugar ABC transporter, permease protein BCE_3824 107 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 42779359 Common - conserved hypothetical protein TIGR00150 BCE_0278 112 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 42781417 Pathogen - hypothetical protein BCE_2354 1 None None None 42784277 Common smpB SsrA-binding protein BCE_5231 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 42784505 Common rho transcription termination factor Rho BCE_5460 206 COG1158 Rho, Transcription termination factor Transcription 42782798 Common - hypothetical protein BCE_3748 15 COG2322 COG2322, Predicted membrane protein Function unknown 42780803 Common - germination protein gerN BCE_1729 212 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42783755 Common dnaI primosomal protein DnaI BCE_4709 69 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 42781400 Common - hypothetical protein BCE_2337 2 None None None 42780054 Common - hypothetical protein BCE_0978 2 None None None 42784130 Common - nucleotidyltransferase domain protein BCE_5084 7 None None None 42780105 Common - hypothetical protein BCE_1029 41 COG1378 COG1378, Predicted transcriptional regulators Transcription 42780972 Common - transcriptional regulator, GntR family BCE_1903 139 COG2188 PhnF, Transcriptional regulators Transcription 42780017 Pathogen - hypothetical protein BCE_0941 1 None None None 42781814 Common - ABC transporter domain protein BCE_2757 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42783835 Common - transcriptional regulator, TetR family domain protein BCE_4789 100 COG1309 AcrR, Transcriptional regulator Transcription 42782640 Common - spore germination protein BCE_3590 15 None None None 42783704 Common - hypothetical protein BCE_4658 2 None None None 42780156 Common - hypothetical protein BCE_1080 2 None None None 42783799 Common - hypothetical protein BCE_4753 3 None None None 42784572 Common ung uracil-DNA glycosylase BCE_5527 129 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 42779531 Common - iron compound ABC transporter, permease protein BCE_0450 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42782855 Common - hypothetical protein BCE_3805 8 COG4550 COG4550, Predicted membrane protein Function unknown 42779380 Common - hypothetical protein BCE_0299 5 COG4627 COG4627, Uncharacterized protein conserved in bacteria Function unknown 42780430 Common trpE anthranilate synthase component I BCE_1356 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 42782065 Common - hypothetical protein BCE_3009 4 None None None 42782125 Common adP alkaline D-peptidase BCE_3069 151 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42780085 Common - sensor histidine kinase BCE_1009 189 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 42779267 Pathogen - hypothetical protein BCE_0186 1 None None None 42781879 Common rpiA ribose-5-phosphate isomerase A BCE_2822 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 42779398 Common purE phosphoribosylaminoimidazole carboxylase catalytic subunit BCE_0317 233 COG0041 PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase Nucleotide transport and metabolism 42779676 Common - mutT/nudix family protein BCE_0596 58 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42782420 Pathogen - hypothetical protein BCE_3367 1 None None None 42782606 Common - hypothetical protein BCE_3556 53 COG1584 COG1584, Predicted membrane protein Function unknown 42784357 Common - polysaccharide deacetylase, putative BCE_5312 93 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42783817 Pathogen - hypothetical protein BCE_4771 1 None None None 42782557 Pathogen - hypothetical protein BCE_3506 1 None None None 42783251 Common - oxidoreductase, short-chain dehydrogenase/reductase family BCE_4205 238 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42781232 Common - hypothetical protein BCE_2166 4 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42782691 Common - hypothetical protein BCE_3641 169 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42781827 Common fadB5 oxidoreductase, zinc-binding BCE_2770 185 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42779713 Common - DNA-binding response regulator BCE_0634 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42784372 Common - proton/glutamate symporter family protein, putative BCE_5327 163 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 42783219 Common - sugar-binding transcriptional regulator, LacI family, putative BCE_4173 125 COG1609 PurR, Transcriptional regulators Transcription 42782620 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_3570 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42783810 Common argH argininosuccinate lyase BCE_4764 234 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 42782680 Common - hypothetical protein BCE_3630 2 None None None 42781933 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_2877 191 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42779085 Common recF recombination protein F BCE_0004 167 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 42784391 Common - hypothetical protein BCE_5346 39 COG3339 COG3339, Uncharacterized conserved protein Function unknown 42781806 Common OmpR2 transcription response regulator-like protein BCE_2749 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42780161 Common rsbW serine-protein kinase RsbW BCE_1085 45 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 42781259 Common - hypothetical protein BCE_2193 3 None None None 42781507 Common - acetyltransferase, GNAT family BCE_2445 11 COG0456 RimI, Acetyltransferases General function prediction only 42783855 Pathogen - hypothetical protein BCE_4809 1 None None None 42780418 Pathogen - hypothetical protein BCE_1344 1 None None None 42780134 Pathogen - hypothetical protein BCE_1058 1 None None None 42784674 Common - hypothetical protein BCE_5629 14 None None None 42783396 Common pstA phosphate ABC transporter, permease protein BCE_4350 231 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 42783240 Common cpdB 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein BCE_4194 119 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 42781728 Common - cobalt transport protein BCE_2669 57 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 42781943 Pathogen - hypothetical protein BCE_2887 1 None None None 42780272 Common - sulfate ABC transporter, permease protein BCE_1197 238 COG0555 CysU, ABC-type sulfate transport system, permease component Posttranslational modification, protein turnover, chaperones 42783135 Common - phage integrase family protein BCE_4088 2 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42783961 Pathogen - hypothetical protein BCE_4915 1 None None None 42779118 Common - deoxyribonuclease, TatD family BCE_0037 240 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 42782380 Common - ribonuclease activity regulator protein RraA BCE_3327 102 COG0684 MenG, Demethylmenaquinone methyltransferase Coenzyme metabolism 42784042 Common - transcriptional regulator, TetR family domain protein BCE_4996 31 COG1309 AcrR, Transcriptional regulator Transcription 42780331 Common - hypothetical protein BCE_1257 5 None None None 42784227 Common - methyl-accepting chemotaxis protein BCE_5181 161 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42784610 Common algI alginate O-acetylation protein (algI) BCE_5565 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 42779808 Common - transcriptional regulator, MarR family BCE_0730 81 COG1846 MarR, Transcriptional regulators Transcription 42781977 Common - major facilitator family transporter BCE_2921 51 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42780375 Common - oligopeptide ABC transporter, permease protein BCE_1301 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42784095 Common kapD sporulation inhibitor KapD BCE_5049 18 COG5018 KapD, Inhibitor of the KinA pathway to sporulation, predicted exonuclease General function prediction only 42783631 Common - HAM1 protein BCE_4585 237 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 42782509 Pathogen - hypothetical protein BCE_3456 1 None None None 42782614 Common - argininosuccinate lyase BCE_3564 219 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 42782476 Common spxA transcriptional regulator Spx BCE_3423 52 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 42780867 Common - AzlC family protein BCE_1795 110 COG1296 AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) Amino acid transport and metabolism 42781253 Common fhs formate--tetrahydrofolate ligase BCE_2187 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 42784118 Pathogen - hypothetical protein BCE_5072 1 None None None 42780181 Common - hypothetical protein BCE_1105 1 None None None 42779497 Common - hypothetical protein BCE_0416 7 None None None 42783343 Common - hypothetical protein BCE_4297 3 None None None 42783340 Common - hypothetical protein BCE_4294 6 None None None 42782290 Common - hypothetical protein BCE_3235 3 None None None 42779385 Common - hypothetical protein BCE_0304 5 None None None 42784244 Common - nucleoside transporter, NupC family BCE_5198 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42779633 Common glsA glutaminase BCE_0553 72 COG2066 GlsA, Glutaminase Amino acid transport and metabolism 42782221 Common - magnesium and cobalt transport protein (corA), putative BCE_3166 139 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 42779204 Common rpsN 30S ribosomal protein S14 BCE_0123 195 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 42779391 Pathogen - hypothetical protein BCE_0310 1 None None None 42781633 Common - hypothetical protein BCE_2572 4 COG4627 COG4627, Uncharacterized protein conserved in bacteria Function unknown 42781717 Common - hypothetical protein BCE_2658 36 COG1695 COG1695, Predicted transcriptional regulators Transcription 42781031 Pathogen - hypothetical protein BCE_1962 1 None None None 42781217 Common - 3-hydroxyanthranilate 3,4-dioxygenase BCE_2151 16 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 42781510 Pathogen - hypothetical protein BCE_2448 1 None None None 42779148 Common pabB para-aminobenzoate synthase component I BCE_0067 222 COG0147 TrpE, Anthranilate/para-aminobenzoate synthases component I Amino acid transport and metabolism / Coenzyme metabolism 42782150 Common - Unknown, putative BCE_3094 5 COG3393 COG3393, Predicted acetyltransferase General function prediction only 42779352 Common - lipoprotein, putative BCE_0271 4 COG2834 LolA, Outer membrane lipoprotein-sorting protein Cell envelope biogenesis, outer membrane 42781261 Common - RNA polymerase sigma factor BCE_2195 163 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42781645 Common - hypothetical protein BCE_2584 1 None None None 42784140 Common - hypothetical protein BCE_5094 13 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42781512 Common hemY protoporphyrinogen oxidase BCE_2450 51 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 42780545 Common nrdF ribonucleotide-diphosphate reductase subunit beta BCE_1471 154 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 42782074 Common - polyketide synthesis domain protein BCE_3018 13 COG1917 COG1917, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 42779903 Common - spore germination protein BCE_0826 14 None None None 42782025 Common aacC7 aminoglycoside N3-acetyltransferase BCE_2969 20 COG2746 COG2746, Aminoglycoside N3'-acetyltransferase Defense mechanisms 42784479 Common atpF F0F1 ATP synthase subunit B BCE_5434 108 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 42784436 Common - glycosyl transferase, group 1 family protein BCE_5391 34 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 42781066 Common - hypothetical protein BCE_1997 32 COG1276 PcoD, Putative copper export protein Inorganic ion transport and metabolism 42781326 Common - hydrolase, haloacid dehalogenase-like family BCE_2262 108 COG0546 Gph, Predicted phosphatases General function prediction only 42783164 Common ptsG PTS system, glucose-specific IIABC component BCE_4117 60 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 42779464 Common - hypothetical protein BCE_0383 13 None None None 42779235 Common rocF arginase BCE_0154 159 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 42782957 Common sun sun protein BCE_3907 212 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 42779571 Common - ABC transporter, permease protein, putative BCE_0491 197 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 42781068 Common - transporter, EamA family BCE_1999 90 COG2510 COG2510, Predicted membrane protein Function unknown 42783401 Common sodA superoxide dismutase, Mn BCE_4355 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 42783464 Common - hypothetical protein BCE_4418 2 None None None 42779429 Common - conserved hypothetical protein, degenerate BCE_0348 4 COG4682 COG4682, Predicted membrane protein Function unknown 42781742 Common - vanZ protein, putative BCE_2684 8 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 161511030 Common - hypothetical protein BCE_0623 1 None None None 42780315 Pathogen - hypothetical protein BCE_1241 1 None None None 42784307 Common - hypothetical protein BCE_5261 50 COG2035 COG2035, Predicted membrane protein Function unknown 42782465 Common zwf glucose-6-phosphate 1-dehydrogenase BCE_3412 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 42782572 Common - alcohol dehydrogenase, zinc-containing BCE_3521 204 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42783346 Pathogen - hypothetical protein BCE_4300 1 None None None 42779660 Pathogen - hypothetical protein BCE_0580 1 None None None 42780437 Pathogen - hypothetical protein BCE_1363 1 None None None 42781061 Common - sodium/bile acid symporter family protein BCE_1992 93 COG0798 ACR3, Arsenite efflux pump ACR3 and related permeases Inorganic ion transport and metabolism 42779083 Common dnaN DNA polymerase III subunit beta BCE_0002 216 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 42783293 Common argR arginine repressor BCE_4247 80 COG1438 ArgR, Arginine repressor Transcription 42781015 Common - hypothetical protein BCE_1946 100 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 42779092 Common - pyridoxine biosynthesis protein BCE_0011 87 COG0214 SNZ1, Pyridoxine biosynthesis enzyme Coenzyme metabolism 42782686 Common sspO acid-soluble spore protein O BCE_3636 2 None None None 42779574 Common - hypothetical protein BCE_0494 3 None None None 42783720 Common - RNA pseudouridylate synthase family protein BCE_4674 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 42780817 Common hfq host factor-I protein BCE_1744 53 COG1923 Hfq, Uncharacterized host factor I protein General function prediction only 42783102 Common comI competence-specific nuclease BCE_4055 2 None None None 42784673 Common - mechanosensitive ion channel family protein BCE_5628 209 COG0668 MscS, Small-conductance mechanosensitive channel Cell envelope biogenesis, outer membrane 42780086 Common - response regulator BCE_1010 91 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 42783711 Common - hypothetical protein BCE_4665 129 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 42781335 Common hlY hemolysin III BCE_2271 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 42779399 Common purK phosphoribosylaminoimidazole carboxylase ATPase subunit BCE_0318 194 COG0026 PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) Nucleotide transport and metabolism 42783789 Pathogen - hypothetical protein BCE_4743 1 None None None 42779253 Pathogen - hypothetical protein BCE_0172 1 None None None 42779768 Common - orotate phosphoribosyltransferase domani protein BCE_0690 200 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 42781840 Common - hypothetical protein BCE_2783 19 None None None 42782157 Common - hypothetical protein BCE_3101 12 None None None 42783632 Common rph ribonuclease PH BCE_4586 216 COG0689 Rph, RNase PH Translation, ribosomal structure and biogenesis 42779885 Pathogen - hypothetical protein BCE_0808 1 None None None 42779245 Pathogen - hypothetical protein BCE_0164 1 None None None 42780466 Common - spore coat-associated protein, putative BCE_1392 2 None None None 42782230 Common - beta-lactamase BCE_3175 152 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42782237 Common - hypothetical protein BCE_3182 13 COG2267 PldB, Lysophospholipase Lipid metabolism 42781941 Common - hypothetical protein BCE_2885 71 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 42781160 Pathogen - hypothetical protein BCE_2094 1 None None None 42781228 Pathogen - hypothetical protein BCE_2162 1 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 42783955 Common - molybdenum cofactor biosynthesis protein B, putative BCE_4909 190 COG0521 MoaB, Molybdopterin biosynthesis enzymes Coenzyme metabolism 42780886 Common - hypothetical protein BCE_1815 2 None None None 42780645 Common hmp nitric oxide dioxygenase BCE_1571 146 COG1017 Hmp, Hemoglobin-like flavoprotein Energy production and conversion 42782845 Common - cell wall hydrolase, putative BCE_3795 106 COG3773 SleB, Cell wall hydrolyses involved in spore germination Cell envelope biogenesis, outer membrane 42784217 Pathogen - hypothetical protein BCE_5171 1 None None None 42780295 Pathogen - hypothetical protein BCE_1220 1 None None None 42783735 Common - small acid-soluble spore protein SspI BCE_4689 4 None None None 42784585 Common - DNA-binding response regulator BCE_5540 225 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42781678 Common - hypothetical protein BCE_2619 3 None None None 42781939 Common - hypothetical protein BCE_2883 107 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 42779451 Common - hypothetical protein BCE_0370 9 COG3655 COG3655, Predicted transcriptional regulator Transcription 42779816 Common - putative translaldolase BCE_0738 159 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 42780180 Pathogen - hypothetical protein BCE_1104 1 None None None 42780624 Common - cbiX domain protein BCE_1550 76 COG2138 COG2138, Uncharacterized conserved protein Function unknown 42779321 Pathogen - invasion protein IagB domain protein BCE_0240 1 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 42780133 Pathogen - hypothetical protein BCE_1057 1 None None None 42781207 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_2141 45 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42781390 Pathogen - hypothetical protein BCE_2327 1 None None None 42783991 Pathogen - hypothetical protein BCE_4945 1 None None None 42782766 Common - hypothetical protein BCE_3716 5 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 42783496 Common - iron compound ABC transporter, iron compound-binding protein BCE_4450 129 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42780524 Common - transcriptional regulator, MarR family BCE_1450 122 COG1846 MarR, Transcriptional regulators Transcription 42784033 Common - hypothetical protein BCE_4987 22 COG5658 COG5658, Predicted integral membrane protein Function unknown 42782510 Common - penicillin-binding protein, putative BCE_3457 111 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42782586 Common - hypothetical protein BCE_3535 7 None None None 42783318 Common aroQ 3-dehydroquinate dehydratase BCE_4272 170 COG0757 AroQ, 3-dehydroquinate dehydratase II Amino acid transport and metabolism 42781085 Common - hypothetical protein BCE_2016 13 None None None 42782043 Common - sulfatase BCE_2987 64 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 42779584 Common - major facilitator family transporter BCE_0504 137 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781009 Common - hypothetical protein BCE_1940 76 COG2843 PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) Cell envelope biogenesis, outer membrane 42781958 Common - oligoendopeptidase F, putative BCE_2902 86 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42780738 Common - glycosyl transferase, group 1 family protein BCE_1664 226 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 42782911 Common - membrane-associated zinc metalloprotease, putative BCE_3861 215 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 42781629 Common - hypothetical protein BCE_2568 37 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 42779967 Common - ABC transporter, permease protein, putative BCE_0891 10 COG5522 COG5522, Predicted integral membrane protein Function unknown 42780652 Common - penicillin-binding protein BCE_1578 205 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 42780265 Pathogen - hypothetical protein BCE_1190 1 None None None 42783431 Common - PhoH family protein BCE_4385 199 COG1702 PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase Signal transduction mechanisms 42781051 Common - xaa-pro aminopeptidase, putative BCE_1982 230 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 42779794 Common - hypothetical protein BCE_0716 79 COG2378 COG2378, Predicted transcriptional regulator Transcription 42779890 Common - major facilitator family transporter BCE_0813 207 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780534 Common - radical SAM domain protein BCE_1460 132 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 42782312 Pathogen - hypothetical protein BCE_3257 1 None None None 42783552 Common ruvA Holliday junction DNA helicase motor protein BCE_4506 210 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 42782948 Common - phosphatase, putative BCE_3898 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 42783283 Common - leucine dehydrogenase BCE_4237 126 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 42779757 Pathogen - hypothetical protein BCE_0679 1 None None None 42781518 Common - hypothetical protein BCE_2456 4 COG2019 AdkA, Archaeal adenylate kinase Nucleotide transport and metabolism 42781167 Common - cobalamin synthesis protein/P47K family protein BCE_2101 127 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 42782108 Pathogen - hypothetical protein BCE_3052 1 None None None 42779853 Common - N-acyl-L-amino acid amidohydrolase, degenerate BCE_0775 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 42783120 Common - hypothetical protein BCE_4073 9 None None None 42783609 Common clpX ATP-dependent protease ATP-binding subunit BCE_4563 226 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 42780707 Common - hypothetical protein BCE_1633 3 None None None 42784437 Common - glycosyl transferase, group 2 family protein BCE_5392 211 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42782081 Common - permease, putative BCE_3025 153 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782333 Pathogen - F0F1 ATP synthase subunit alpha BCE_3280 1 None None None 42783371 Pathogen - hypothetical protein BCE_4325 1 None None None 42779547 Common - amino acid ABC transporter, permease protein BCE_0467 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42784245 Common - nucleoside transporter, NupC family BCE_5199 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42780226 Common - HIT family protein BCE_1151 238 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 42779158 Pathogen - hypothetical protein BCE_0077 1 None None None 42779736 Common - glycerophosphoryl diester phosphodiesterase family protein BCE_0658 138 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 42780409 Common - glucose-1-phosphate thymidylyltransferase, putative BCE_1335 227 COG1209 RfbA, dTDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 42782123 Pathogen - hypothetical protein BCE_3067 1 None None None 42784626 Common - transporter, putative BCE_5581 17 None None None 42783187 Common - sodium-dependent symporter family protein BCE_4141 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 42780702 Common - hypothetical protein BCE_1628 2 None None None 42781090 Common cydA cytochrome d ubiquinol oxidase, subunit I BCE_2021 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 42782024 Common - hypothetical protein BCE_2968 94 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 42782105 Pathogen - hypothetical protein BCE_3049 1 None None None 42783782 Common - hypothetical protein BCE_4736 8 None None None 42779717 Common - sensory histidine kinase DcuS BCE_0639 205 COG3290 CitA, Signal transduction histidine kinase regulating citrate/malate metabolism Signal transduction mechanisms 42780510 Common - iron compound ABC transporter, iron compound-binding protein, putative BCE_1436 134 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 42783247 Common argB acetylglutamate kinase BCE_4201 217 COG0548 ArgB, Acetylglutamate kinase Amino acid transport and metabolism 42780231 Common - transcriptional regulator, TetR family BCE_1156 43 COG1309 AcrR, Transcriptional regulator Transcription 42784445 Common - capsular exopolysaccharide family protein BCE_5400 197 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 42779403 Common purQ phosphoribosylformylglycinamidine synthase subunit I BCE_0322 232 COG0047 PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain Nucleotide transport and metabolism 42783615 Pathogen - hypothetical protein BCE_4569 1 None None None 42780474 Common potC spermidine/putrescine ABC transporter, permease protein BCE_1400 220 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 42782945 Common plsX fatty acid/phospholipid synthesis protein BCE_3895 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 42783985 Pathogen - hypothetical protein BCE_4939 1 None None None 42783915 Pathogen - hypothetical protein BCE_4869 1 None None None 42784486 Common glyA serine hydroxymethyltransferase BCE_5441 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 42779602 Common - hypothetical protein BCE_0522 2 None None None 42779908 Common spoVR stage V sporulation protein R BCE_0832 71 COG2719 SpoVR, Uncharacterized conserved protein Function unknown 42780293 Common - DNA-binding response regulator BCE_1218 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42783517 Common alaS alanyl-tRNA synthetase BCE_4471 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42784308 Common trxB thioredoxin reductase BCE_5262 249 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 42780848 Pathogen - hypothetical protein BCE_1775 1 None None None 42783510 Common - peptidase, U32 family BCE_4464 138 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 42783982 Common - ABC transporter, ATP-binding protein BCE_4936 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 42779725 Common - acetyltransferase, GNAT family BCE_0647 68 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783023 Common - hypothetical protein BCE_3975 16 COG3314 COG3314, Uncharacterized protein conserved in bacteria Function unknown 42783891 Common - 2'-5' RNA ligase family protein, putative BCE_4845 96 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 42780953 Pathogen - hypothetical protein BCE_1884 1 None None None 42783678 Common - hypothetical protein BCE_4632 12 None None None 42784360 Common - hypothetical protein BCE_5315 4 None None None 42784044 Common gntP gluconate permease BCE_4998 82 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 42784073 Common glgC glucose-1-phosphate adenylyltransferase BCE_5027 221 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 42781549 Common - hypothetical protein BCE_2487 2 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 42784166 Common - ABC transporter, ATP-binding protein BCE_5120 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 42779287 Common - oligopeptide ABC transporter, permease protein BCE_0206 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42780285 Common - transcriptional regulator, TetR family, putative BCE_1210 26 COG1309 AcrR, Transcriptional regulator Transcription 42780956 Common - hypothetical protein BCE_1887 3 None None None 42784195 Common - hypothetical protein BCE_5149 1 None None None 42780354 Common prsA peptidylprolyl isomerase BCE_1280 168 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 42781882 Common - glycosyltransferase, putative BCE_2825 59 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 42781622 Pathogen - hypothetical protein BCE_2561 1 None None None 42782782 Common glnR transcriptional repressor GlnR BCE_3732 50 COG0789 SoxR, Predicted transcriptional regulators Transcription 42784612 Common - transcriptional regulator, TetR family BCE_5567 84 COG1309 AcrR, Transcriptional regulator Transcription 42779722 Common - lipoprotein, putative BCE_0644 2 None None None 42783013 Common - hypothetical protein BCE_3965 20 COG4365 COG4365, Uncharacterized protein conserved in bacteria Function unknown 42781131 Common - sapB protein BCE_2063 114 COG1285 SapB, Uncharacterized membrane protein Function unknown 42780091 Pathogen - hypothetical protein BCE_1015 1 None None None 42784590 Common cstA carbon starvation protein A BCE_5545 109 COG1966 CstA, Carbon starvation protein, predicted membrane protein Signal transduction mechanisms 42784533 Common - aminopeptidase, putative BCE_5488 78 COG2234 Iap, Predicted aminopeptidases General function prediction only 42779901 Common - hypothetical protein BCE_0824 3 None None None 42783304 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit BCE_4258 177 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 42781748 Common - thiJ/pfpI family protein BCE_2690 37 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 42780748 Common aspB aspartate aminotransferase BCE_1674 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 42781932 Common - acetyltransferase, GNAT family BCE_2876 122 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782307 Common - cytochrome p450(meg) BCE_3252 3 None None None 42782459 Common - hypothetical protein BCE_3406 60 COG2706 COG2706, 3-carboxymuconate cyclase Carbohydrate transport and metabolism 42779532 Common - iron compound ABC transporter, iron compound-binding protein BCE_0451 71 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42781570 Pathogen - hypothetical protein BCE_2508 1 None None None 42782985 Common - ribosomal large subunit pseudouridine synthase, RluD subfamily BCE_3937 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 42782280 Common - nucleotidyltransferase domain protein BCE_3225 2 None None None 42780930 Pathogen - hypothetical protein BCE_1860 1 None None None 42783663 Pathogen - hypothetical protein BCE_4617 1 None None None 42783621 Common - hypothetical protein BCE_4575 44 COG5293 COG5293, Uncharacterized protein conserved in bacteria Function unknown 42783406 Common - cation ABC transporter, permease protein, putative BCE_4360 192 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 42782522 Common - alternate gene name: ybdP similar to amino BCE_3471 142 COG1113 AnsP, Gamma-aminobutyrate permease and related permeases Amino acid transport and metabolism 42780243 Common hemH ferrochelatase BCE_1168 151 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 42780825 Pathogen - NADH dehydrogenase subunit 3, putative BCE_1752 1 None None None 42782731 Common hutP anti-terminator HutP BCE_3681 2 None None None 42783917 Common - rhodanese-like domain protein BCE_4871 98 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 42783003 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase BCE_3955 202 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 42784210 Common - acetyltransferase, putative BCE_5164 77 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780178 Common - DNA-binding response regulator, LuxR family BCE_1102 224 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42784373 Common - hypothetical protein BCE_5328 20 COG3274 COG3274, Uncharacterized protein conserved in bacteria Function unknown 42779911 Common - hypothetical protein BCE_0835 2 None None None 42780483 Common - glycolate oxidase, iron-sulfur subunit, putative BCE_1409 178 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 42779937 Common - hypothetical protein BCE_0861 1 None None None 42783252 Common - metallo-beta-lactamase superfamily domain protein BCE_4206 94 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42780034 Pathogen - hypothetical protein BCE_0958 1 None None None 42784080 Common sapB sapB protein BCE_5034 115 COG1285 SapB, Uncharacterized membrane protein Function unknown 42783060 Common - hypothetical protein BCE_4013 2 None None None 42780238 Common - hypothetical protein BCE_1163 34 COG3402 COG3402, Uncharacterized conserved protein Function unknown 42782295 Common - drug resistance transporter, EmrB/QacA family BCE_3240 198 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783216 Pathogen - DNA-binding protein, CopG family BCE_4170 1 None None None 42779104 Common - hypothetical protein BCE_0023 5 None None None 42780453 Common odhB dihydrolipoamide acetyltransferase BCE_1379 197 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 42779111 Common - hypothetical protein BCE_0030 58 COG1774 COG1774, Uncharacterized homolog of PSP1 Function unknown 42780236 Common - lipoprotein, putative BCE_1161 25 COG1293 COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP Transcription 42779305 Pathogen - hypothetical protein BCE_0224 1 None None None 42782141 Common - ABC transporter, permease protein BCE_3085 3 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42782861 Common spoVS stage V sporulation protein S BCE_3811 24 COG2359 SpoVS, Uncharacterized protein conserved in bacteria Function unknown 42784262 Common ccrB camphor resistance protein CrcB BCE_5216 3 COG0239 CrcB, Integral membrane protein possibly involved in chromosome condensation Cell division and chromosome partitioning 42781954 Pathogen - hypothetical protein BCE_2898 1 None None None 42782066 Common - hypothetical protein BCE_3010 24 COG4427 COG4427, Uncharacterized protein conserved in bacteria Function unknown 42783962 Common pckA phosphoenolpyruvate carboxykinase BCE_4916 98 COG1866 PckA, Phosphoenolpyruvate carboxykinase (ATP) Energy production and conversion 42780263 Common - hypothetical protein BCE_1188 98 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 42780812 Common - hypothetical protein BCE_1738 153 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42779616 Common - hypothetical protein BCE_0536 3 None None None 42784026 Pathogen - hypothetical protein BCE_4980 1 None None None 42780982 Common - major facilitator superfamily protein BCE_1913 48 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781317 Common - aspartate racemase family protein BCE_2253 89 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 42784310 Common - bacterial transferase hexapeptide domain protein BCE_5264 175 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 42782300 Common - hypothetical protein BCE_3245 15 COG0439 AccC, Biotin carboxylase Lipid metabolism 42781383 Pathogen - hypothetical protein BCE_2319 1 None None None 42784018 Common - S-layer homology domain protein BCE_4972 25 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 42779318 Common - deoxyribonuclease, TatD family, putative BCE_0237 235 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 42781665 Pathogen - hypothetical protein BCE_2605 1 None None None 42779117 Common metG methionyl-tRNA synthetase BCE_0036 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42781026 Common - sensor histidine kinase, putative BCE_1957 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779480 Common clpP ClpP protease family protein BCE_0399 115 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 42782130 Common - hypothetical protein BCE_3074 51 COG1359 COG1359, Uncharacterized conserved protein Function unknown 42783988 Common - mutT/nudix family protein BCE_4942 22 COG2816 NPY1, NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding DNA replication, recombination, and repair 42780048 Common csaB CsaB protein BCE_0972 44 COG2327 WcaK, Uncharacterized conserved protein Function unknown 42781893 Pathogen - hypothetical protein BCE_2836 1 COG2367 PenP, Beta-lactamase class A Defense mechanisms 42779868 Common - CBS domain protein BCE_0791 184 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 42784253 Common - major facilitator family transporter BCE_5207 158 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781432 Common - hypothetical protein BCE_2369 7 None None None 42781454 Common - exonuclease, putative BCE_2391 166 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 42779183 Common rpoB DNA-directed RNA polymerase subunit beta BCE_0102 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 42782993 Common - conserved hypothetical protein TIGR00044 BCE_3945 199 COG0325 COG0325, Predicted enzyme with a TIM-barrel fold General function prediction only 42781205 Common spoIIP stage II sporulation protein P BCE_2139 15 None None None 42780148 Common - S-layer protein, putative BCE_1072 28 COG5279 CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain Cell division and chromosome partitioning 42783079 Common - CBS domain protein BCE_4032 13 COG2524 COG2524, Predicted transcriptional regulator, contains C-terminal CBS domains Transcription 42781182 Common - mutT/nudix family protein BCE_2116 71 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42783600 Common hemD uroporphyrinogen-III synthase BCE_4554 88 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 42784194 Common - proline dehydrogenase family protein BCE_5148 139 COG0506 PutA, Proline dehydrogenase Amino acid transport and metabolism 42782975 Common pyrE orotate phosphoribosyltransferase BCE_3927 122 COG0461 PyrE, Orotate phosphoribosyltransferase Nucleotide transport and metabolism 42780422 Common - hypothetical protein BCE_1348 17 COG1514 LigT, 2'-5' RNA ligase Translation, ribosomal structure and biogenesis 42780490 Common - hypothetical protein BCE_1416 169 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 42783162 Common ptsI phosphoenolpyruvate-protein phosphotransferase BCE_4115 235 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 42784222 Pathogen - hypothetical protein BCE_5176 1 None None None 42782445 Common - CBS domain protein BCE_3392 219 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 42781320 Common - hypothetical protein BCE_2256 120 COG0241 HisB, Histidinol phosphatase and related phosphatases Amino acid transport and metabolism 42784450 Common spoIIID stage III sporulation protein D BCE_5405 15 None None None 42780690 Common - adaptor protein BCE_1616 14 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 42781908 Common - hypothetical protein BCE_2851 5 None None None 42782387 Pathogen - lipoprotein, putative BCE_3334 1 None None None 42781361 Common - hypothetical protein BCE_2297 164 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42783084 Common - glutaredoxin family protein BCE_4037 22 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 42780947 Pathogen - hypothetical protein BCE_1878 1 None None None 42781330 Common thyA thymidylate synthase BCE_2266 145 COG0207 ThyA, Thymidylate synthase Nucleotide transport and metabolism 42781565 Common - transcriptional regulator, MarR family, putative BCE_2503 30 COG1846 MarR, Transcriptional regulators Transcription 42782139 Common - ABC transporter, ATP-binding protein BCE_3083 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42779559 Common - hypothetical protein BCE_0479 38 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 42782094 Common - alkaline phosphatase BCE_3038 84 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 42782914 Common uppS undecaprenyl diphosphate synthase BCE_3864 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 42780998 Pathogen - hypothetical protein BCE_1929 1 None None None 42783070 Common def peptide deformylase BCE_4023 215 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 42782836 Common - probable transcriptional regulator, putative BCE_3786 23 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 42783308 Common spoIIIAE stage III sporulation protein AE BCE_4262 15 None None None 42779626 Common - hypothetical protein BCE_0546 1 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 42784007 Common - hypothetical protein BCE_4961 76 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 42780346 Pathogen - hypothetical protein BCE_1272 1 None None None 42781405 Common - PAP2 family protein BCE_2342 107 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 42782214 Pathogen - hypothetical protein BCE_3159 1 None None None 42782891 Pathogen - hypothetical protein BCE_3841 1 None None None 42780799 Common - hypothetical protein BCE_1725 13 COG3162 COG3162, Predicted membrane protein Function unknown 42782406 Pathogen - lipoprotein, putative BCE_3353 1 None None None 42784520 Common - acetyl-CoA acetyltransferase BCE_5475 182 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 42783682 Common - ABC transporter, ATP-binding protein BCE_4636 249 COG4152 COG4152, ABC-type uncharacterized transport system, ATPase component General function prediction only 42781472 Common - DNA polymerase, DinB family BCE_2409 16 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 42781857 Pathogen - hypothetical protein BCE_2800 1 None None None 42782743 Common - conserved repeat domain protein BCE_3693 23 COG3889 COG3889, Predicted solute binding protein General function prediction only 42782753 Common - holin-like protein BCE_3703 22 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 42780519 Common - hypothetical protein BCE_1445 21 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 42780865 Common - alanyl-tRNA synthetase domain protein BCE_1793 235 COG2872 COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain General function prediction only 42781495 Common - metallo-beta-lactamase family protein BCE_2433 41 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42781894 Common - acetyltransferase, GNAT family BCE_2837 133 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42782833 Common - hypothetical protein BCE_3783 3 None None None 42784524 Common - sensory box/GGDEF family protein BCE_5479 182 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 42780197 Common - hypothetical protein BCE_1121 3 None None None 42784507 Common glpX fructose 1,6-bisphosphatase II BCE_5462 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 42780336 Pathogen - hypothetical protein BCE_1262 1 None None None 42780850 Common - chemotaxis protein CheV BCE_1777 159 COG0835 CheW, Chemotaxis signal transduction protein Cell motility and secretion / Signal transduction mechanisms 42782723 Common - sodium/proline symporter family protein BCE_3673 187 COG0591 PutP, Na+/proline symporter Amino acid transport and metabolism / General function prediction only 42779261 Pathogen - hypothetical protein BCE_0180 1 None None None 42781983 Common - inosine-uridine preferring nucleoside hydrolase family protein BCE_2927 83 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 42783109 Common malD maltosaccharide ABC transporter, permease protein BCE_4062 161 COG3833 MalG, ABC-type maltose transport systems, permease component Carbohydrate transport and metabolism 42781480 Pathogen - hypothetical protein BCE_2418 1 None None None 42782353 Pathogen - hypothetical protein BCE_3300 1 None None None 42780675 Common resD DNA-binding response regulator ResD BCE_1601 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42779407 Common purN phosphoribosylglycinamide formyltransferase BCE_0326 227 COG0299 PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN Nucleotide transport and metabolism 42781420 Pathogen - hypothetical protein BCE_2357 1 None None None 42780509 Pathogen - hypothetical protein BCE_1435 1 None None None 42780426 Common - hypothetical protein BCE_1352 9 COG5492 COG5492, Bacterial surface proteins containing Ig-like domains Cell motility and secretion 42781610 Common - acetyl-CoA carboxylase biotin carboxylase subunit BCE_2549 230 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 42782761 Common - hypothetical protein BCE_3711 2 None None None 42780471 Common ywdH aldehyde dehydrogenase BCE_1397 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42783819 Common ackA acetate kinase BCE_4773 162 COG0282 ackA, Acetate kinase Energy production and conversion 42781449 Pathogen - hypothetical protein BCE_2386 1 None None None 42782979 Common carB carbamoyl phosphate synthase large subunit BCE_3931 238 COG0458 CarB, Carbamoylphosphate synthase large subunit (split gene in MJ) Amino acid transport and metabolism / Nucleotide transport and metabolism 42783127 Pathogen - hlyC domain protein BCE_4080 1 None None None 42779586 Pathogen - hypothetical protein BCE_0506 1 None None None 42783698 Common - transcriptional regulator, TetR family BCE_4652 134 COG1309 AcrR, Transcriptional regulator Transcription 42780253 Common - hypothetical protein BCE_1178 127 COG1511 COG1511, Predicted membrane protein Function unknown 42780463 Common sipW signal peptidase I BCE_1389 20 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 42784548 Common - glycerophosphoryl diester phosphodiesterase family protein BCE_5503 172 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 42780858 Common - hypothetical protein BCE_1785 2 None None None 42781125 Pathogen - hypothetical protein BCE_2057 1 None None None 42783565 Common - transcriptional regulator, ArsR family BCE_4519 17 COG0640 ArsR, Predicted transcriptional regulators Transcription 42779368 Common - CAAX amino terminal protease family protein BCE_0287 45 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 42779386 Common - hypothetical protein BCE_0305 170 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42779833 Common - LPXTG-site transpeptidase family protein BCE_0755 23 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 42781743 Common - hypothetical protein BCE_2685 2 None None None 42784668 Common rpsR 30S ribosomal protein S18 BCE_5623 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 42782418 Common - protein-tyrosine phosphatase-like protein BCE_3365 49 COG2365 COG2365, Protein tyrosine/serine phosphatase Signal transduction mechanisms 42780682 Common - hypothetical protein BCE_1608 17 COG4955 COG4955, Uncharacterized protein conserved in bacteria Function unknown 42781343 Common - heat shock protein, Hsp20 family BCE_2279 36 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 42780171 Common - hypothetical protein BCE_1095 103 COG0393 COG0393, Uncharacterized conserved protein Function unknown 42781153 Common - ribosome-associated GTPase BCE_2087 164 COG1162 COG1162, Predicted GTPases General function prediction only 42780049 Pathogen eag S-layer protein EA1 BCE_0973 1 None None None 42784203 Common - amino acid permease family protein BCE_5157 193 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42784442 Common - capsular polysaccharide biosynthesis protein BCE_5397 40 COG4464 CapC, Capsular polysaccharide biosynthesis protein Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 42781266 Pathogen - hypothetical protein BCE_2201 1 None None None 42780202 Common glpD glycerol-3-phosphate dehydrogenase, aerobic BCE_1126 149 COG0578 GlpA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 42780074 Pathogen - hypothetical protein BCE_0998 1 None None None 42781305 Common - hypothetical protein BCE_2240 70 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 42782050 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase BCE_2994 235 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 42781702 Pathogen - hypothetical protein BCE_2643 1 None None None 42782940 Common smC chromosome segregation SMC protein BCE_3890 203 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 42782951 Common - hypothetical protein BCE_3901 48 COG1564 THI80, Thiamine pyrophosphokinase Coenzyme metabolism 42779082 Common dnaA chromosomal replication initiation protein BCE_0001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 42779572 Common - ABC transporter, substrate-binding protein, putative BCE_0492 106 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 42780770 Pathogen - hypothetical protein BCE_1696 1 None None None 42781278 Pathogen - hypothetical protein BCE_2213 1 None None None 42779691 Common - amino acid ABC transporter, permease protein BCE_0611 176 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42783147 Pathogen - hypothetical protein BCE_4100 1 None None None 42781555 Common - hypothetical protein BCE_2493 3 None None None 42779563 Common - endonuclease/exonuclease/phosphatase family protein BCE_0483 4 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 42780929 Pathogen - hypothetical protein BCE_1859 1 None None None 42780658 Common - hypothetical protein BCE_1584 68 COG1801 COG1801, Uncharacterized conserved protein Function unknown 42783145 Common mtnA methylthioribose-1-phosphate isomerase BCE_4098 130 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 42784365 Common celB PTS system, cellobiose-specific IIC component BCE_5320 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 42782596 Common glnQ amino acid ABC transporter-like protein BCE_3546 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 42782885 Common - dihydrodipicolinate synthase, putative BCE_3835 9 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 42783752 Common infC translation initiation factor IF-3 BCE_4706 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 42781615 Common - acetoacetyl-CoA synthase, putative BCE_2554 217 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 42779522 Common - 5-methylthioribose kinase, putative BCE_0441 2 None None None 42783275 Common - mutT/nudix family protein BCE_4229 115 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42780960 Common - acetyltransferase, GNAT family BCE_1891 154 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783928 Common leuS leucyl-tRNA synthetase BCE_4882 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42783598 Common hemL glutamate-1-semialdehyde aminotransferase BCE_4552 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 42779912 Pathogen - hypothetical protein BCE_0836 1 None None None 42782904 Common nusA transcription elongation factor NusA BCE_3854 224 COG0195 NusA, Transcription elongation factor Transcription 42780795 Common - hypothetical protein BCE_1721 14 COG3403 COG3403, Uncharacterized conserved protein Function unknown 42779591 Pathogen - LPXTG-motif cell wall anchor domain protein BCE_0511 1 COG4278 COG4278, Uncharacterized conserved protein Function unknown 42783119 Common - lipoprotein, putative BCE_4072 1 None None None 42781585 Pathogen - hypothetical protein BCE_2523 1 None None None 42782826 Common - hypothetical protein BCE_3776 32 COG2364 COG2364, Predicted membrane protein Function unknown 42782841 Pathogen - hypothetical protein BCE_3791 1 None None None 42779192 Common rplD 50S ribosomal protein L4 BCE_0111 226 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 42780637 Common - DNA-binding response regulator BCE_1563 212 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42781833 Common - hypothetical protein BCE_2776 7 COG4129 COG4129, Predicted membrane protein Function unknown 42779501 Common - transcriptional regulator, MerR family BCE_0420 123 COG0789 SoxR, Predicted transcriptional regulators Transcription 42781657 Common - ralimis BCE_2597 170 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42783934 Common - ABC transporter, ATP-binding protein BCE_4888 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42783459 Common nadD nicotinic acid mononucleotide adenyltransferase BCE_4413 195 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 42780123 Common - ATP synthase protein I, putative BCE_1047 4 None None None 42780581 Pathogen - hypothetical protein BCE_1507 1 None None None 42779669 Common - ABC transporter, permease protein, putative BCE_0589 38 COG3694 COG3694, ABC-type uncharacterized transport system, permease component General function prediction only 42782411 Pathogen - hypothetical protein BCE_3358 1 None None None 42782734 Common - hypothetical protein BCE_3684 3 None None None 42784058 Common - O-succinylbenzoic acid--CoA ligase BCE_5012 225 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42784181 Common ldh L-lactate dehydrogenase BCE_5135 164 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 42779294 Common - hypothetical protein BCE_0213 22 COG1511 COG1511, Predicted membrane protein Function unknown 42779614 Pathogen - hypothetical protein BCE_0534 1 None None None 42779636 Pathogen - hypothetical protein BCE_0556 1 None None None 42781912 Common - chitin binding protein, putative BCE_2855 28 COG3397 COG3397, Uncharacterized protein conserved in bacteria Function unknown 42779155 Common - TIM-barrel protein, putative, NifR3 family BCE_0074 217 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 42782348 Common - S-layer protein, putative BCE_3295 20 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42781460 Pathogen - hypothetical protein BCE_2397 1 None None None 42779662 Common - hypothetical protein BCE_0582 16 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 42783047 Common - hypothetical protein BCE_3999 1 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 42783573 Common - ABC transporter, permease protein BCE_4527 17 COG3127 COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component Secondary metabolites biosynthesis, transport, and catabolism 42784160 Common - transcriptional regulator, PadR family BCE_5114 86 COG1695 COG1695, Predicted transcriptional regulators Transcription 42780995 Common - hypothetical protein BCE_1926 54 COG2323 COG2323, Predicted membrane protein Function unknown 42779902 Common - lipoprotein, putative BCE_0825 3 None None None 42780508 Common - hypothetical protein BCE_1434 2 None None None 42781188 Common - cytosolic long-chain acyl-CoA thioester hydrolase family protein BCE_2122 138 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 42782311 Common - hypothetical protein BCE_3256 7 COG1376 ErfK, Uncharacterized protein conserved in bacteria Function unknown 42783463 Common - hydrolase, HAD subfamily IIIA BCE_4417 45 COG2179 COG2179, Predicted hydrolase of the HAD superfamily General function prediction only 42783726 Common - cvpA family protein BCE_4680 10 COG1286 CvpA, Uncharacterized membrane protein, required for colicin V production General function prediction only 42781406 Common - cation efflux family protein BCE_2343 213 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 42783613 Pathogen - hypothetical protein BCE_4567 1 None None None 42780762 Common - hypothetical protein BCE_1688 12 COG4474 COG4474, Uncharacterized protein conserved in bacteria Function unknown 42782274 Common - ABC transporter, ATP-binding protein BCE_3219 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42782541 Common - hypothetical protein BCE_3490 3 None None None 42780915 Common - hypothetical protein BCE_1845 17 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 42782638 Common - molybdopterin oxidoreductase family protein BCE_3588 215 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 42780574 Pathogen - hypothetical protein BCE_1500 1 None None None 42783623 Common - Ser/Thr protein phosphatase family protein BCE_4577 6 COG1409 Icc, Predicted phosphohydrolases General function prediction only 42782350 Pathogen - lipoprotein, putative BCE_3297 2 None None None 42779412 Common - hypothetical protein BCE_0331 2 None None None 42779545 Common - Rieske 2Fe-2S iron-sulfur protein, putative BCE_0465 121 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 42779225 Common rpsI 30S ribosomal protein S9 BCE_0144 248 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 42783182 Common spoVAD stage V sporulation protein AD BCE_4136 15 None None None 42783307 Common spoIIIAF stage III sporulation protein AF BCE_4261 4 None None None 42783869 Pathogen - hypothetical protein BCE_4823 1 None None None 42783943 Common - hypothetical protein BCE_4897 180 COG1033 COG1033, Predicted exporters of the RND superfamily General function prediction only 42782436 Pathogen - hypothetical protein BCE_3383 1 None None None 42783537 Common relA GTP pyrophosphokinase BCE_4491 207 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 42783643 Pathogen - hypothetical protein BCE_4597 2 None None None 42779390 Common - transcriptional regulator, LysR family protein BCE_0309 192 COG0583 LysR, Transcriptional regulator Transcription 42782694 Common - mutT/nudix family protein BCE_3644 77 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42779281 Common - hypothetical protein BCE_0200 62 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42783748 Common - peptidase, M42 family BCE_4702 88 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 42782032 Common - acetyltransferase, GNAT family BCE_2976 80 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780564 Common amaA N-acyl-L-amino acid amidohydrolase BCE_1490 168 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 42780018 Common - ABC transporter, ATP-binding/permease protein BCE_0942 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42781646 Pathogen - hypothetical protein BCE_2585 2 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42781554 Pathogen - hypothetical protein BCE_2492 1 None None None 42783473 Common - alkaline phosphatase BCE_4427 84 COG1785 PhoA, Alkaline phosphatase Inorganic ion transport and metabolism 42780749 Common dnaD DNA replication protein DnaD BCE_1675 20 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 42781039 Pathogen nheC non-hemolytic enterotoxin C BCE_1970 2 None None None 42784134 Common cotS spore coat protein cotS BCE_5088 4 None None None 42779548 Common - amino acid ABC transporter, amino acid-binding protein BCE_0468 185 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 42779823 Common spH sphingomyelinase C BCE_0745 10 COG3568 ElsH, Metal-dependent hydrolase General function prediction only 42781533 Common - hypothetical protein BCE_2471 79 COG2258 COG2258, Uncharacterized protein conserved in bacteria Function unknown 42784112 Common - hypothetical protein BCE_5066 25 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 42782002 Pathogen - hypothetical protein BCE_2946 1 None None None 42779692 Pathogen - hypothetical protein BCE_0613 1 None None None 42781991 Common - transporter, putative BCE_2935 114 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42784586 Common - sensor histidine kinase, putative BCE_5541 146 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 42784274 Pathogen - hypothetical protein BCE_5228 1 None None None 42780780 Common - cation transporter, putative BCE_1706 150 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 42782243 Common - acetyl esterase, putative BCE_3188 95 COG0657 Aes, Esterase/lipase Lipid metabolism 42782427 Pathogen - hypothetical protein BCE_3374 1 None None None 42780567 Common - hypothetical protein BCE_1493 2 None None None 42779446 Common - DNA-cytosine methyltransferase family protein BCE_0365 123 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 42780920 Common - hypothetical protein BCE_1850 13 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 42779333 Common - oligopeptide ABC transporter, ATP-binding protein BCE_0252 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 42779454 Common - hypothetical protein BCE_0373 3 None None None 42779923 Common - hypothetical protein BCE_0847 2 None None None 42784232 Pathogen - hypothetical protein BCE_5186 1 None None None 42781260 Common qor quinone oxidoreductase BCE_2194 195 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42781634 Common - fmtA-like protein, putative BCE_2573 147 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42783347 Pathogen - hypothetical protein BCE_4301 1 None None None 42779506 Common - aminoglycoside nucleotidyltransferase, putative BCE_0425 5 None None None 42783505 Common - hypothetical protein BCE_4459 4 COG4499 COG4499, Predicted membrane protein Function unknown 42783801 Common - hypothetical protein BCE_4755 33 COG0662 {ManC}, Mannose-6-phosphate isomerase Carbohydrate transport and metabolism 42779745 Common - neutral protease BCE_0667 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 42781468 Common - 4'-phosphopantetheinyl transferase, putative BCE_2405 62 COG2091 Sfp, Phosphopantetheinyl transferase Coenzyme metabolism 42780870 Common - transcriptional regulator, TetR family BCE_1798 48 COG1309 AcrR, Transcriptional regulator Transcription 42783091 Common - Ppx/GppA phosphatase family protein BCE_4044 184 COG0248 GppA, Exopolyphosphatase Nucleotide transport and metabolism / Inorganic ion transport and metabolism 42782853 Common mutS DNA mismatch repair protein BCE_3803 204 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 42782265 Common - arsenical resistence operon repressor ArsR BCE_3210 133 COG0640 ArsR, Predicted transcriptional regulators Transcription 42782529 Common - cytidine deaminase BCE_3478 4 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 42783658 Pathogen - hypothetical protein BCE_4612 1 None None None 42779924 Pathogen - hypothetical protein BCE_0848 1 None None None 42780314 Pathogen - hypothetical protein BCE_1240 1 None None None 42784221 Common - hypothetical protein BCE_5175 17 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 42779975 Common - hypothetical protein BCE_0899 3 None None None 42779220 Common - ABC transporter, ATP-binding protein BCE_0139 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 42780004 Common blT multidrug resistance protein BCE_0928 199 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782189 Common - hypothetical protein BCE_3134 4 COG1633 COG1633, Uncharacterized conserved protein Function unknown 42783543 Common - hypothetical protein BCE_4497 3 None None None 42779131 Common - hypothetical protein BCE_0050 3 None None None 42779888 Common kdpC potassium-transporting ATPase, C subunit BCE_0811 95 COG2156 KdpC, K+-transporting ATPase, c chain Inorganic ion transport and metabolism 42783651 Common - DNA-cytosine methyltransferase family protein BCE_4605 132 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 42783588 Common mreD rod shape-determining protein MreD BCE_4542 10 COG2891 MreD, Cell shape-determining protein Cell envelope biogenesis, outer membrane 42780052 Common - alginate O-acetyltransferase, putative BCE_0976 86 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 42783442 Common grpE GrpE protein BCE_4396 232 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 42783228 Common ribH riboflavin synthase subunit beta BCE_4182 230 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 42781433 Common - penicillin-binding protein 1A BCE_2370 202 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 42779272 Common - prolyl oligopeptidase family protein, putative BCE_0191 120 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 42784631 Common - glycosyl transferase, group 1 family protein BCE_5586 191 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 42780187 Common - HD domain protein BCE_1111 47 COG3481 COG3481, Predicted HD-superfamily hydrolase General function prediction only 42783170 Common - metallo-beta-lactamase family protein BCE_4123 122 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 42781675 Common - acetamidase/formamidase family protein BCE_2616 44 COG2421 COG2421, Predicted acetamidase/formamidase Energy production and conversion 42782722 Common - glyoxylase family protein BCE_3672 39 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42781054 Pathogen - hypothetical protein BCE_1985 1 None None None 42782511 Pathogen - hypothetical protein BCE_3458 1 None None None 42781787 Common - acetyltransferase, GNAT family BCE_2730 22 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782432 Pathogen - hypothetical protein BCE_3379 1 None None None 42780020 Pathogen - hypothetical protein BCE_0944 1 None None None 42781971 Pathogen - hypothetical protein BCE_2915 1 None None None 42783055 Common - hypothetical protein BCE_4007 9 COG4493 COG4493, Uncharacterized protein conserved in bacteria Function unknown 42784653 Common - hypothetical protein BCE_5608 166 COG1576 COG1576, Uncharacterized conserved protein Function unknown 42780325 Common gerPB spore germination protein GerPB BCE_1251 1 None None None 42782319 Pathogen - hypothetical protein BCE_3265 1 None None None 42783836 Common - hypothetical protein BCE_4790 84 COG1956 COG1956, GAF domain-containing protein Signal transduction mechanisms 42779899 Common - thioredoxin, putative BCE_0822 40 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 42779502 Common - hypothetical protein BCE_0421 5 COG5504 COG5504, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 42779809 Common - drug resistance transporter, EmrB/QacA family BCE_0731 199 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781641 Common - transcriptional regulator, MerR family BCE_2580 8 COG0789 SoxR, Predicted transcriptional regulators Transcription 42779432 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B BCE_0351 213 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 42780766 Common - hypothetical protein BCE_1692 117 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 42784145 Common fbp fructose 1,6-bisphosphatase II BCE_5099 112 COG1494 GlpX, Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins Carbohydrate transport and metabolism 42781176 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_2110 180 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42783328 Pathogen - hypothetical protein BCE_4282 1 None None None 42783589 Common mreC rod shape-determining protein MreC BCE_4543 141 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 42781233 Pathogen - hypothetical protein BCE_2167 1 None None None 42783894 Common - RNA pseudouridylate synthase family protein BCE_4848 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 42784327 Common - transcriptional regulator, MerR family BCE_5281 121 COG0789 SoxR, Predicted transcriptional regulators Transcription 42780891 Common - hypothetical protein BCE_1820 6 COG2367 PenP, Beta-lactamase class A Defense mechanisms 42782477 Common - transcriptional regulator, GntR family BCE_3424 123 COG2188 PhnF, Transcriptional regulators Transcription 42783743 Pathogen - hypothetical protein BCE_4697 1 None None None 42783884 Common - peptidase, M42 family BCE_4838 89 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 42780804 Common - metallo-beta-lactamase family protein BCE_1730 162 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 42781817 Pathogen - hypothetical protein BCE_2760 1 None None None 42780414 Common - hypothetical protein BCE_1340 2 None None None 161511020 Common rpsU 30S ribosomal protein S21 BCE_4390 101 None None None 42784565 Common - hypothetical protein BCE_5520 5 None None None 42781907 Pathogen - hypothetical protein BCE_2850 1 None None None 42782534 Pathogen - hypothetical protein BCE_3483 1 None None None 42783397 Common pstC phosphate ABC transporter, permease protein BCE_4351 226 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 42781069 Common - transcriptional regulator, LysR family BCE_2000 193 COG0583 LysR, Transcriptional regulator Transcription 42780098 Pathogen - hypothetical protein BCE_1022 1 None None None 42782998 Common spoIIGA sporulation sigma-E factor processing peptidase BCE_3950 12 None None None 42779443 Common - nucleoside transporter, NupC family BCE_0362 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42779769 Common - mutT/nudix family protein BCE_0691 4 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42780785 Common - isochorismatase family protein BCE_1711 55 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42779587 Common - hypothetical protein BCE_0507 75 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 42782180 Common - stage II sporulation protein P, putative BCE_3125 15 None None None 42784501 Common prfA peptide chain release factor 1 BCE_5456 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 42784283 Common iunH purine nucleoside hydrolase BCE_5237 85 COG1957 URH1, Inosine-uridine nucleoside N-ribohydrolase Nucleotide transport and metabolism 42783416 Common - hypothetical protein BCE_4370 30 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 42784104 Common - phosphoglucomutase/phosphomannomutase family protein BCE_5058 239 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 42779777 Common treB PTS system, trehalose-specific IIBC component BCE_0699 42 COG1263 PtsG, Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific Carbohydrate transport and metabolism 42784556 Common - iron compound ABC transporter, permease protein BCE_5511 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42784424 Common - DNA-binding response regulator BCE_5379 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42779167 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BCE_0086 189 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 42781267 Common bsaA glutathione peroxidase BCE_2202 115 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 42784293 Common - hypothetical protein BCE_5247 2 None None None 42783856 Pathogen - minD family ATPase domain protein BCE_4810 1 None None None 42781807 Common - histidine kinase, putative BCE_2750 218 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779712 Common - serine/threonine phosphatase, putative BCE_0633 119 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 42780731 Common - uracil-DNA glycosylase family protein BCE_1657 142 COG1573 COG1573, Uracil-DNA glycosylase DNA replication, recombination, and repair 42784604 Pathogen - hypothetical protein BCE_5559 1 None None None 42779439 Pathogen - lipoprotein, putative BCE_0358 1 None None None 42781618 Common - acetyltransferase, GNAT family BCE_2557 70 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780588 Pathogen - hypothetical protein BCE_1514 1 None None None 42780190 Pathogen - hypothetical protein BCE_1114 1 None None None 42782621 Pathogen - hypothetical protein BCE_3571 1 None None None 42782381 Common - transporter, putative BCE_3328 38 COG1288 COG1288, Predicted membrane protein Function unknown 42783156 Common - 2-hydroxy-3-oxopropionate reductase BCE_4109 196 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 42779762 Common - iron compound ABC transporter, permease protein BCE_0684 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42782165 Common - MutT/nudix family protein BCE_3110 22 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42783342 Pathogen - hypothetical protein BCE_4296 1 None None None 42780417 Pathogen - hypothetical protein BCE_1343 1 None None None 42784618 Common - response regulator LytR BCE_5573 213 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 42779995 Common - transporter, EamA family BCE_0919 194 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 42779807 Common glpT glycerol-3-phosphate transporter BCE_0729 124 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42782080 Common - hypothetical protein BCE_3024 4 COG2329 COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides General function prediction only 42782958 Common fmt methionyl-tRNA formyltransferase BCE_3908 221 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 42781143 Common - transition state transcriptional regulatory protein, putative BCE_2077 16 COG2002 AbrB, Regulators of stationary/sporulation gene expression Transcription 42782057 Pathogen - hypothetical protein BCE_3001 1 None None None 42784309 Common - TPR domain protein BCE_5263 15 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 42781258 Common - glyoxalase family protein BCE_2192 18 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42781699 Common - probable spore germination protein F-related protein BCE_2640 2 None None None 42782229 Pathogen - hypothetical protein BCE_3174 1 None None None 42781132 Common - hypothetical protein BCE_2064 49 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42784117 Common - O-methyltransferase BCE_5071 102 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 42781562 Common - hypothetical protein BCE_2500 170 COG0344 COG0344, Predicted membrane protein Function unknown 42782208 Common - hypothetical protein BCE_3153 1 None None None 42780835 Pathogen - hypothetical protein BCE_1762 1 None None None 42779498 Common - DNA recombinase, putative BCE_0417 81 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42781252 Common - hypothetical protein BCE_2186 166 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42782628 Common - mrp protein BCE_3578 234 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 42784094 Common - kinase-associated protein B BCE_5048 3 None None None 42779260 Pathogen - hypothetical protein BCE_0179 1 None None None 42783862 Common - lipoprotein, putative BCE_4816 10 COG4851 CamS, Protein involved in sex pheromone biosynthesis General function prediction only 42782613 Common - argininosuccinate lyase, putative BCE_3563 16 COG0165 ArgH, Argininosuccinate lyase Amino acid transport and metabolism 42781522 Common - hydrolase, haloacid dehalogenase-like family BCE_2460 126 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42780273 Common - sulfate ABC transporter, permease protein BCE_1198 234 COG4208 CysW, ABC-type sulfate transport system, permease component Inorganic ion transport and metabolism 42780374 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_1300 199 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42780118 Pathogen - hypothetical protein BCE_1042 1 None None None 42781216 Common - riboflavin biosynthesis protein, truncated BCE_2150 210 COG0196 RibF, FAD synthase Coenzyme metabolism 42781067 Common - hypothetical protein BCE_1998 14 COG4549 COG4549, Uncharacterized protein conserved in bacteria Function unknown 42780965 Pathogen - hypothetical protein BCE_1896 1 None None None 42782954 Common - serine/threonine protein kinase BCE_3904 158 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 42780155 Common - hypothetical protein BCE_1079 5 COG3324 COG3324, Predicted enzyme related to lactoylglutathione lyase General function prediction only 42779478 Common - phage terminase, large subunit, putative BCE_0397 48 COG4626 COG4626, Phage terminase-like protein, large subunit General function prediction only 42782151 Common - hypothetical protein BCE_3095 98 COG1671 COG1671, Uncharacterized protein conserved in bacteria Function unknown 42783163 Common ptsH phosphocarrier protein HPr BCE_4116 87 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 42781749 Common - glutamate decarboxylase BCE_2691 65 COG0076 GadB, Glutamate decarboxylase and related PLP-dependent proteins Amino acid transport and metabolism 42783364 Common comGD comG operon protein 4 BCE_4318 6 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 42783381 Pathogen - hypothetical protein BCE_4335 1 None None None 42783622 Common - hypothetical protein BCE_4576 1 None None None 42782508 Common - hypothetical protein BCE_3455 4 None None None 42783272 Pathogen - hypothetical protein BCE_4226 1 None None None 42784141 Common - NAD(P)H dehydrogenase, quinone family BCE_5095 87 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 42784448 Pathogen - hypothetical protein BCE_5403 1 None None None 42781513 Pathogen - hypothetical protein BCE_2451 1 None None None 42782984 Common pyrR pyrimidine regulatory protein PyrR BCE_3936 116 COG2065 PyrR, Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase Nucleotide transport and metabolism 42783134 Pathogen - hypothetical protein BCE_4087 1 None None None 42779770 Common - hypothetical protein BCE_0692 21 COG4548 NorD, Nitric oxide reductase activation protein Inorganic ion transport and metabolism 42781501 Common - acetyltransferase, GNAT family BCE_2439 35 COG0456 RimI, Acetyltransferases General function prediction only 42780438 Pathogen - hypothetical protein BCE_1364 1 None None None 42779463 Common - phage antirepressor protein, putative BCE_0382 24 COG3561 COG3561, Phage anti-repressor protein Transcription 42783278 Common bfmbB branched-chain alpha-keto acid dehydrogenase subunit E2 BCE_4232 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 42784430 Common ugd UDP-glucose 6-dehydrogenase BCE_5385 207 COG1004 Ugd, Predicted UDP-glucose 6-dehydrogenase Cell envelope biogenesis, outer membrane 42779205 Common rpsH 30S ribosomal protein S8 BCE_0124 249 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 42780009 Common - major facilitator family transporter BCE_0933 106 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42783523 Common - helicase, putative BCE_4477 135 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 42783601 Common hemC porphobilinogen deaminase BCE_4555 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 42783493 Common - ankyrin repeat domain protein BCE_4447 3 None None None 42780794 Common cspB cold shock protein CspB BCE_1720 181 COG1278 CspC, Cold shock proteins Transcription 42781978 Common - lipoprotein, putative BCE_2922 3 None None None 42779149 Common pabA para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II BCE_0068 238 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 42779216 Common rpsM 30S ribosomal protein S13 BCE_0135 244 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 42781860 Common acoB TPP-dependent acetoin dehydrogenase E1 beta-subunit BCE_2803 202 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 42779427 Common - arsenite-activated ATPase (arsA) BCE_0346 100 COG0003 ArsA, Predicted ATPase involved in chromosome partitioning Cell division and chromosome partitioning 42781298 Common - hypothetical protein BCE_2233 11 None None None 42782571 Common - transcriptional regulator, ArsR family BCE_3520 53 COG0640 ArsR, Predicted transcriptional regulators Transcription 42781325 Common - hypothetical protein BCE_2261 3 None None None 42781599 Common - penicillin-binding protein Pbp2b BCE_2538 196 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42784470 Common nuoA NADH dehydrogenase subunit A BCE_5425 163 COG0838 NuoA, NADH:ubiquinone oxidoreductase subunit 3 (chain A) Energy production and conversion 42781737 Common - Pap2 superfamily protein, putative BCE_2678 67 None None None 42783313 Common - hypothetical protein BCE_4267 5 None None None 42783314 Common - acetyltransferase, GNAT family BCE_4268 21 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42779234 Common - glycerate kinase BCE_0153 81 COG1929 COG1929, Glycerate kinase Carbohydrate transport and metabolism 42781511 Common - hydrolase, alpha/beta fold family BCE_2449 57 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783292 Common recN DNA repair protein RecN BCE_4246 214 COG0497 RecN, ATPase involved in DNA repair DNA replication, recombination, and repair 42780164 Common - response regulator BCE_1088 224 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 42779452 Common - hypothetical protein BCE_0371 5 None None None 42783400 Common - hypothetical protein BCE_4354 7 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42781194 Common - CBS domain protein BCE_2128 221 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 42782359 Pathogen - hypothetical protein BCE_3306 1 None None None 42781965 Pathogen - hypothetical protein BCE_2909 1 None None None 42779785 Common - amino acid ABC transporter, ATP-binding protein BCE_0707 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 42781416 Common - collagen triple helix repeat domain protein BCE_2353 95 COG3391 COG3391, Uncharacterized conserved protein Function unknown 42781994 Common - aspartate aminotransferase BCE_2938 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 42779157 Pathogen - hypothetical protein BCE_0076 1 None None None 42781098 Pathogen - hypothetical protein BCE_2029 1 None None None 42781148 Pathogen - hypothetical protein BCE_2082 1 None None None 42783036 Common ctaF cytochrome c oxidase, subunit IVB BCE_3988 3 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 42782442 Common - hypothetical protein BCE_3389 3 None None None 42781119 Common hom homoserine dehydrogenase BCE_2051 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 42782179 Common - copper homeostasis protein CutC, putative BCE_3124 59 COG3142 CutC, Uncharacterized protein involved in copper resistance Inorganic ion transport and metabolism 42784250 Pathogen - hypothetical protein BCE_5204 1 None None None 42780303 Common aceB malate synthase BCE_1228 57 COG2225 AceB, Malate synthase Energy production and conversion 42781336 Common - twin-arginine translocation protein, TatA/E family BCE_2272 10 COG1826 TatA, Sec-independent protein secretion pathway components Intracellular trafficking and secretion 42779687 Common - internalin, putative BCE_0607 39 COG4886 COG4886, Leucine-rich repeat (LRR) protein Function unknown 42782932 Common rplS 50S ribosomal protein L19 BCE_3882 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 42784088 Common - gluconate 2-dehydrogenase BCE_5042 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 42782196 Pathogen - hypothetical protein BCE_3141 1 None None None 42781683 Pathogen - hypothetical protein BCE_2624 1 None None None 42782012 Pathogen - hypothetical protein BCE_2956 2 None None None 42781283 Common - N-acetyltransferase family protein BCE_2218 34 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 42781548 Common - hypothetical protein BCE_2486 5 None None None 42781869 Common - hypothetical protein BCE_2812 2 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 42783820 Common - hypothetical protein BCE_4774 14 COG0827 COG0827, Adenine-specific DNA methylase DNA replication, recombination, and repair 42782804 Common - Ser/Thr protein phosphatase family protein BCE_3754 112 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 42782816 Common smtB cadmium efflux system accessory protein BCE_3766 68 COG0640 ArsR, Predicted transcriptional regulators Transcription 42782921 Common - ATP-dependent hsl protease, ATP-binding subunit hslU BCE_3871 174 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 42784019 Pathogen - hypothetical protein BCE_4973 1 None None None 42784153 Common - phosphoglycerate mutase family protein, putative BCE_5107 15 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42779944 Common - hypothetical protein BCE_0868 104 COG0425 SirA, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 42780065 Common - hypothetical protein BCE_0989 9 None None None 42781291 Common - hypothetical protein BCE_2226 28 COG4760 COG4760, Predicted membrane protein Function unknown 42782877 Common - transcriptional regulator, GntR family BCE_3827 134 COG2188 PhnF, Transcriptional regulators Transcription 42781032 Pathogen - hypothetical protein BCE_1963 1 None None None 42779268 Pathogen - hypothetical protein BCE_0187 1 None None None 42783708 Common - DNA-binding response regulator BCE_4662 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782927 Common sucD succinyl-CoA synthetase subunit alpha BCE_3877 214 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 42783829 Common sspB small, acid-soluble spore protein B BCE_4783 12 None None None 42784573 Common - ABC transporter, permease protein BCE_5528 22 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 42780971 Common - oxidoreductase family protein BCE_1902 151 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 42779375 Common - DNA-binding response regulator BCE_0294 215 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782924 Common gid tRNA (uracil-5-)-methyltransferase Gid BCE_3874 194 COG1206 Gid, NAD(FAD)-utilizing enzyme possibly involved in translation Translation, ribosomal structure and biogenesis 42783231 Common - biotin synthesis protein BioC, putative BCE_4185 157 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 42781942 Pathogen - hypothetical protein BCE_2886 1 None None None 42779627 Common - amino acid permease family protein BCE_0547 182 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 42781280 Common - hypothetical protein BCE_2215 15 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 42780032 Common alsS acetolactate synthase BCE_0956 222 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 42779983 Pathogen - hypothetical protein BCE_0907 1 None None None 42782494 Common - putative RNA polymerase sigma factor SigI BCE_3441 14 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42782049 Common - acetyltransferase, GNAT family BCE_2993 30 COG4552 Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases General function prediction only 42783581 Common - hypothetical protein BCE_4535 22 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 42784356 Common - glycosyl transferase, group 4 family protein BCE_5311 224 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 42781878 Common fdX ferredoxin BCE_2821 33 COG0633 Fdx, Ferredoxin Energy production and conversion 42783969 Pathogen - hypothetical protein BCE_4923 1 None None None 42783677 Common - DNA-binding protein BCE_4631 110 COG1396 HipB, Predicted transcriptional regulators Transcription 42779875 Common - ABC transporter, substrate-binding protein, putative BCE_0798 106 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 42782666 Common parC DNA topoisomerase IV subunit A BCE_3616 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 42781093 Common - transport ATP-binding protein CydD BCE_2024 249 COG4987 CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 42783760 Common gap glyceraldehyde-3-phosphate dehydrogenase BCE_4714 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 42783921 Common gerHB spore germination protein GerHB BCE_4875 14 None None None 42784490 Common - PTS system, glucose-specific IIA component, putative BCE_5445 60 COG2190 NagE, Phosphotransferase system IIA components Carbohydrate transport and metabolism 42781312 Common - hypothetical protein BCE_2248 26 COG3575 COG3575, Uncharacterized protein conserved in bacteria Function unknown 42784382 Pathogen - hypothetical protein BCE_5337 1 None None None 42782605 Common - flavodoxin BCE_3555 106 COG0716 FldA, Flavodoxins Energy production and conversion 42779844 Common - acetyltransferase, GNAT family BCE_0766 17 COG3393 COG3393, Predicted acetyltransferase General function prediction only 42781944 Common - hypothetical protein BCE_2888 46 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42780651 Common - hypothetical protein BCE_1577 63 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 42780623 Common cysG uroporphyrin-III C-methyltransferase BCE_1549 203 COG0007 CysG, Uroporphyrinogen-III methylase Coenzyme metabolism 42784276 Pathogen - hypothetical protein BCE_5230 1 None None None 42784506 Pathogen - hypothetical protein BCE_5461 1 None None None 42780849 Pathogen - hypothetical protein BCE_1776 1 None None None 42780759 Common - hypothetical protein BCE_1685 2 None None None 42782653 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_3603 188 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42783901 Common - hypothetical protein BCE_4855 2 None None None 42779656 Common - yfhP protein BCE_0576 25 COG1988 COG1988, Predicted membrane-bound metal-dependent hydrolases General function prediction only 42782648 Pathogen - hypothetical protein BCE_3598 1 None None None 42781577 Common - hypothetical protein BCE_2515 74 COG3865 COG3865, Uncharacterized protein conserved in bacteria Function unknown 42782138 Common - hypothetical protein BCE_3082 3 None None None 42779358 Common - hypothetical protein BCE_0277 12 COG3091 SprT, Uncharacterized protein conserved in bacteria Function unknown 42779381 Common - hypothetical protein BCE_0300 3 None None None 42779173 Common - hypothetical protein BCE_0092 29 COG3688 COG3688, Predicted RNA-binding protein containing a PIN domain General function prediction only 42780434 Common trpF N-(5'-phosphoribosyl)anthranilate isomerase BCE_1360 198 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 42781328 Common - hypothetical protein BCE_2264 142 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42781741 Common - permease, putative BCE_2682 151 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 42782810 Pathogen - hypothetical protein BCE_3760 1 None None None 42780454 Common kgd alpha-ketoglutarate decarboxylase BCE_1380 148 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 42779629 Common - DNA-binding protein BCE_0549 6 COG3339 COG3339, Uncharacterized conserved protein Function unknown 42781852 Pathogen - hypothetical protein BCE_2795 1 None None None 42783334 Common sugE sugE protein BCE_4288 120 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 42781725 Pathogen - hypothetical protein BCE_2666 1 None None None 42782356 Pathogen - hypothetical protein BCE_3303 1 None None None 42783241 Common - lipase/acylhydrolase, putative BCE_4195 11 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 42780372 Pathogen - hypothetical protein BCE_1298 1 None None None 42784349 Common - degV family protein BCE_5304 53 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 42784384 Common - cytochrome d ubiquinol oxidase, subunit II, putative BCE_5339 6 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 42782929 Common rnhB ribonuclease HII BCE_3879 226 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 42783763 Common mutM formamidopyrimidine-DNA glycosylase BCE_4717 183 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 42782464 Common tkt transketolase BCE_3411 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 42779254 Pathogen - hypothetical protein BCE_0173 1 None None None 42784684 Common rpmH 50S ribosomal protein L34 BCE_5639 191 None None None 42784536 Pathogen - hypothetical protein BCE_5491 1 None None None 42779846 Common - sodium/hydrogen exchanger family protein/TrkA domain protein BCE_0768 214 COG0475 KefB, Kef-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42779860 Common - ferrous iron transport protein A, putative BCE_0783 54 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 42783847 Common acsA acetyl-CoA synthetase BCE_4801 224 COG0365 Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Lipid metabolism 42780119 Pathogen - hypothetical protein BCE_1043 1 None None None 42779665 Common - glutamate synthase, large subunit, putative BCE_0585 202 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 42780840 Common fliG flagellar motor switch protein G BCE_1767 122 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 42783248 Common argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein BCE_4202 167 COG1364 ArgJ, N-acetylglutamate synthase (N-acetylornithine aminotransferase) Amino acid transport and metabolism 42782599 Pathogen - hypothetical protein BCE_3549 1 None None None 42782604 Common - BNR repeat domain protein BCE_3554 2 None None None 42780146 Common - hypothetical protein BCE_1070 93 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 42783885 Common - hypothetical protein BCE_4839 8 COG5584 COG5584, Predicted small secreted protein Function unknown 42780416 Common - hypothetical protein BCE_1342 2 None None None 42781946 Pathogen - hypothetical protein BCE_2890 1 None None None 42780974 Common nagA N-acetylglucosamine-6-phosphate deacetylase BCE_1905 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 42783257 Pathogen - hypothetical protein BCE_4211 1 None None None 42780010 Pathogen - hypothetical protein BCE_0934 1 None None None 42780801 Common - aminotransferase BCE_1727 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 42784611 Common - hypothetical protein BCE_5566 4 None None None 42780373 Pathogen - hypothetical protein BCE_1299 1 None None None 42781141 Common nadE NAD synthetase BCE_2075 215 COG0171 NadE, NAD synthase Coenzyme metabolism 42779783 Common - hypothetical protein BCE_0705 27 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 42781990 Pathogen - hypothetical protein BCE_2934 1 None None None 42784316 Pathogen - hypothetical protein BCE_5270 1 None None None 42783562 Common - cysteine desulfurase BCE_4516 237 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 42780006 Common - lipoprotein, putative BCE_0930 22 COG5485 COG5485, Predicted ester cyclase General function prediction only 42782156 Common - hypothetical protein BCE_3100 12 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42782698 Common - bioY family protein BCE_3648 42 COG1268 BioY, Uncharacterized conserved protein General function prediction only 42783664 Pathogen - hypothetical protein BCE_4618 1 None None None 42782410 Common - ABC transporter, ATP-binding protein BCE_3357 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42782400 Common - ybaK/ebsC family protein BCE_3347 110 COG2606 EbsC, Uncharacterized conserved protein Function unknown 42784050 Common - hypothetical protein BCE_5004 2 None None None 42779392 Pathogen - hypothetical protein BCE_0311 1 None None None 42782036 Common - hypothetical protein BCE_2980 3 None None None 42784261 Common - endonuclease/exonuclease/phosphatase family BCE_5215 11 COG0708 XthA, Exonuclease III DNA replication, recombination, and repair 42779943 Common - metallo-beta-lactamase family protein BCE_0867 183 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42784159 Common - 5'-nucleotidase family protein, truncation BCE_5113 59 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 42782499 Common - ABC transporter, efflux permease protein BCE_3446 66 COG1682 TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane 42780818 Common - hypothetical protein BCE_1745 48 COG1896 COG1896, Predicted hydrolases of HD superfamily General function prediction only 42783509 Common - peptidase, U32 family BCE_4463 139 COG0826 COG0826, Collagenase and related proteases Posttranslational modification, protein turnover, chaperones 42780608 Pathogen - hypothetical protein BCE_1534 1 None None None 42780124 Pathogen - hypothetical protein BCE_1048 1 None None None 42781597 Common - penicillin-binding protein BCE_2536 201 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42779411 Common - SPFH domain/band 7 family protein BCE_0330 39 COG0330 HflC, Membrane protease subunits, stomatin/prohibitin homologs Posttranslational modification, protein turnover, chaperones 42781870 Common - hypothetical protein BCE_2813 5 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 42780820 Common - flagellar motor protein MotS BCE_1747 147 COG1360 MotB, Flagellar motor protein Cell motility and secretion 42784020 Pathogen - hypothetical protein BCE_4974 1 None None None 42781000 Common msrA peptide methionine sulfoxide reductase BCE_1931 204 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 42781293 Common ssb single-strand DNA-binding protein BCE_2228 213 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 42782166 Common - hypothetical protein BCE_3111 23 COG3510 CmcI, Cephalosporin hydroxylase Defense mechanisms 42783290 Pathogen - hypothetical protein BCE_4244 1 None None None 42781288 Pathogen - hypothetical protein BCE_2223 1 None None None 42781527 Common asd aspartate-semialdehyde dehydrogenase BCE_2465 236 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 42780383 Common spxA transcriptional regulator Spx BCE_1309 48 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 42781410 Pathogen - hypothetical protein BCE_2347 1 None None None 42782562 Common - transcriptional regulator, LysR family BCE_3511 189 COG0583 LysR, Transcriptional regulator Transcription 42780503 Common fabG acetoacetyl-CoA reductase BCE_1429 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42781692 Pathogen - hypothetical protein BCE_2633 1 None None None 42784059 Common menB naphthoate synthase BCE_5013 180 COG0447 MenB, Dihydroxynaphthoic acid synthase Coenzyme metabolism 42782926 Common - DNA processing protein (smf family) BCE_3876 211 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 42783837 Common megL methionine gamma-lyase BCE_4791 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 42780087 Common - lipoprotein, putative BCE_1011 71 COG3181 COG3181, Uncharacterized protein conserved in bacteria Function unknown 42783797 Pathogen - hypothetical protein BCE_4751 1 None None None 42782314 Common - lipoprotein, putative BCE_3259 2 None None None 42783398 Common phoX phosphate ABC transporter, phosphate-binding protein BCE_4352 149 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 42782585 Pathogen - hypothetical protein BCE_3534 1 None None None 42779290 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_0209 201 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42783956 Pathogen - hypothetical protein BCE_4910 1 None None None 42784079 Pathogen - hypothetical protein BCE_5033 1 None None None 42784115 Common - hypothetical protein BCE_5069 74 COG1683 COG1683, Uncharacterized conserved protein Function unknown 42779313 Common - sugar-binding transcriptional regulator, LacI family BCE_0232 128 COG1609 PurR, Transcriptional regulators Transcription 42783383 Common metC cystathionine beta-lyase BCE_4337 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 42780892 Common - hypothetical protein BCE_1821 6 None None None 42781314 Common - hydrolase, haloacid dehalogenase-like family BCE_2250 152 COG0546 Gph, Predicted phosphatases General function prediction only 42783790 Common - thioesterase family protein BCE_4744 127 COG4109 COG4109, Predicted transcriptional regulator containing CBS domains Transcription 42784359 Common - transcription antiterminator, BglG family BCE_5314 23 COG3933 COG3933, Transcriptional antiterminator Transcription 42779776 Common treR trehalose operon transcriptional repressor BCE_0698 126 COG2188 PhnF, Transcriptional regulators Transcription 42781813 Pathogen - hypothetical protein BCE_2756 1 None None None 42782574 Common - response regulator, putative BCE_3523 6 None None None 42779806 Common - oligopeptide ABC transporter, ATP-binding protein BCE_0728 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 42781574 Common - ABC transporter, permease protein BCE_2512 4 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 42781964 Pathogen - spore coat protein w, putative BCE_2908 1 None None None 42782507 Common - hypothetical protein BCE_3454 1 None None None 42783224 Pathogen - hypothetical protein BCE_4178 1 None None None 42783889 Common - aminoglycoside phosphotransferase family protein BCE_4843 9 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 42781736 Common - alcohol dehydrogenase, zinc-containing BCE_2677 199 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42781975 Common - hypothetical protein BCE_2919 3 None None None 42780966 Common - multiple sugar-binding transport ATP-binding protein BCE_1897 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 42784468 Common - NADH dehydrogenase subunit C BCE_5423 179 COG0852 NuoC, NADH:ubiquinone oxidoreductase 27 kD subunit Energy production and conversion 42779236 Common - conserved hypothetical protein TIGR00159 BCE_0155 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 42781756 Common - hypothetical protein BCE_2698 8 COG0789 SoxR, Predicted transcriptional regulators Transcription 42781877 Common - RNA polymerase factor sigma-70 BCE_2820 36 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42781617 Pathogen - hypothetical protein BCE_2556 1 None None None 42782612 Common - acetyltransferase, GNAT family BCE_3562 14 COG3393 COG3393, Predicted acetyltransferase General function prediction only 42780542 Pathogen - hypothetical protein BCE_1468 1 None None None 42783466 Pathogen - hypothetical protein BCE_4420 1 None None None 42780168 Pathogen - hypothetical protein BCE_1092 1 None None None 42781234 Common - glycosyltransferase, MGT family BCE_2168 61 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 42782938 Common - hypothetical protein BCE_3888 28 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 42783090 Common ppk polyphosphate kinase BCE_4043 161 COG0855 Ppk, Polyphosphate kinase Inorganic ion transport and metabolism 42782642 Common gerSC spore germination protein BCE_3592 9 None None None 42783483 Common vpR minor extracellular protease VpR BCE_4437 109 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 42784300 Common clpP ATP-dependent Clp protease proteolytic subunit BCE_5254 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 42783161 Pathogen - hypothetical protein BCE_4114 1 None None None 42781398 Common - hypothetical protein BCE_2335 1 None None None 42782174 Common - hypothetical protein BCE_3119 100 COG1540 COG1540, Uncharacterized proteins, homologs of lactam utilization protein B General function prediction only 42780754 Common - hypothetical protein BCE_1680 3 None None None 42780919 Common - hypothetical protein BCE_1849 23 COG3682 COG3682, Predicted transcriptional regulator Transcription 42780419 Common cotZ spore coat protein Z BCE_1345 2 None None None 42783133 Pathogen - hypothetical protein BCE_4086 1 None None None 42780255 Pathogen - hypothetical protein BCE_1180 1 None None None 42780132 Common - response regulator, putative BCE_1056 4 None None None 42779142 Common - hypothetical protein BCE_0061 229 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 42784508 Common murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BCE_5463 218 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 42781404 Common - sporulation-control protein Spo0M, putative BCE_2341 7 COG4326 Spo0M, Sporulation control protein General function prediction only 42780313 Common - hypothetical protein BCE_1239 2 None None None 42783348 Pathogen - hypothetical protein BCE_4302 1 None None None 42779434 Common - haloacid dehalogenase/epoxide hydrolase family protein BCE_0353 78 COG0546 Gph, Predicted phosphatases General function prediction only 42780249 Pathogen - hypothetical protein BCE_1174 3 None None None 42783353 Common - hypothetical protein BCE_4307 3 None None None 42784097 Common - hypothetical protein BCE_5051 2 None None None 42780274 Common - sulfate ABC transporter, ATP-binding protein BCE_1199 249 COG1118 CysA, ABC-type sulfate/molybdate transport systems, ATPase component Inorganic ion transport and metabolism 42784246 Common - sodium/alanine symporter family protein BCE_5200 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 42781799 Common - oxidoreductase, DadA family BCE_2742 159 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 42782832 Pathogen - hypothetical protein BCE_3782 1 None None None 42782268 Common - putative secreted protein BCE_3213 31 None None None 42779852 Common - hypothetical protein BCE_0774 6 COG4990 COG4990, Uncharacterized protein conserved in bacteria Function unknown 42779689 Common glnH glutamine ABC transporter, glutamine-binding protein BCE_0609 188 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 42782434 Pathogen - hypothetical protein BCE_3381 1 COG2261 COG2261, Predicted membrane protein Function unknown 42780031 Common - hypothetical protein BCE_0955 13 COG4709 COG4709, Predicted membrane protein Function unknown 42783583 Common - ribonuclease, Rne/Rng family BCE_4537 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 42783312 Common spoIIIAA stage III sporulation protein AA BCE_4266 32 COG3854 SpoIIIAA, ncharacterized protein conserved in bacteria Function unknown 42779186 Common rpsL 30S ribosomal protein S12 BCE_0105 244 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 42780583 Common - potassium uptake protein, TrkH family BCE_1509 134 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42780366 Common - hypothetical protein BCE_1292 1 None None None 42782952 Common rpe ribulose-phosphate 3-epimerase BCE_3902 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 42783923 Pathogen - hypothetical protein BCE_4877 1 None None None 42780997 Common - hypothetical protein BCE_1928 24 COG5184 ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins Cell division and chromosome partitioning / Cytoskeleton 42780367 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III BCE_1293 231 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 42781800 Common - hypothetical protein BCE_2743 6 COG4430 COG4430, Uncharacterized protein conserved in bacteria Function unknown 42782407 Pathogen - hypothetical protein BCE_3354 1 None None None 42784492 Common - hypothetical protein BCE_5447 79 COG1853 COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family General function prediction only 42781900 Pathogen - hypothetical protein BCE_2843 1 None None None 42782371 Common - hypothetical protein BCE_3318 6 COG4715 COG4715, Uncharacterized conserved protein Function unknown 42783345 Common - transcriptional regulator, GntR family BCE_4299 135 COG1725 COG1725, Predicted transcriptional regulators Transcription 42783524 Common - TPR domain protein BCE_4478 134 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 42783702 Common - hypothetical protein BCE_4656 2 None None None 42783387 Common - metallo-beta-lactamase family protein BCE_4341 224 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42783370 Common - sodium:dicarboxylate symporter family protein BCE_4324 155 COG1823 COG1823, Predicted Na+/dicarboxylate symporter General function prediction only 42779710 Common - glycerol-3-phosphate ABC transporter, permease protein, putative BCE_0631 147 COG0395 UgpE, ABC-type sugar transport system, permease component Carbohydrate transport and metabolism 42782576 Common - transcriptional regulator, putative BCE_3525 28 COG2808 PaiB, Transcriptional regulator Transcription 42783014 Common - 2-dehydropantoate 2-reductase BCE_3966 88 COG1893 ApbA, Ketopantoate reductase Coenzyme metabolism 42782754 Common - hypothetical protein BCE_3704 84 COG1346 LrgB, Putative effector of murein hydrolase Cell envelope biogenesis, outer membrane 42779373 Pathogen - hypothetical protein BCE_0292 1 None None None 42782079 Pathogen - hypothetical protein BCE_3023 1 None None None 42783380 Pathogen - hypothetical protein BCE_4334 1 None None None 42784378 Pathogen - hypothetical protein BCE_5333 1 None None None 42783394 Common - phosphate transport system regulatory protein PhoU, putative BCE_4348 202 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 42783525 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase BCE_4479 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 42783914 Common - collagen triple helix repeat domain protein BCE_4868 2 None None None 42784143 Common - transcriptional regulator, DeoR family BCE_5097 55 COG2345 COG2345, Predicted transcriptional regulator Transcription 42779424 Common - ABC transporter, substrate-binding protein, putative BCE_0343 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 42781789 Common uppP undecaprenyl pyrophosphate phosphatase BCE_2732 200 COG1968 BacA, Uncharacterized bacitracin resistance protein Defense mechanisms 42779196 Common rplV 50S ribosomal protein L22 BCE_0115 229 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 42779729 Pathogen - hypothetical protein BCE_0651 1 None None None 42781561 Common - hypothetical protein BCE_2499 52 COG2971 COG2971, Predicted N-acetylglucosamine kinase Carbohydrate transport and metabolism 42782556 Common - hypothetical protein BCE_3505 87 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 42783064 Pathogen - hypothetical protein BCE_4017 1 None None None 42782304 Common - transcriptional regulator, putative BCE_3249 21 COG1309 AcrR, Transcriptional regulator Transcription 42781788 Common - hypothetical protein BCE_2731 22 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 42780688 Common - transcriptional regulator, MerR family BCE_1614 32 COG0789 SoxR, Predicted transcriptional regulators Transcription 42783411 Common - endonuclease, putative BCE_4365 10 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 42780222 Common - hypothetical protein BCE_1147 2 None None None 42779925 Common - DNA recombinase, putative BCE_0849 67 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42779479 Common - phage portal protein, HK97 family BCE_0398 67 COG4695 COG4695, Phage-related protein Function unknown 42779210 Common rplO 50S ribosomal protein L15 BCE_0129 218 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 42779168 Common gltX glutamyl-tRNA synthetase BCE_0087 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 42781428 Pathogen - hypothetical protein BCE_2365 1 None None None 42783750 Common rplT 50S ribosomal protein L20 BCE_4704 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 42781359 Common - transcriptional regulator, RpiR family, putative BCE_2295 122 COG1737 RpiR, Transcriptional regulators Transcription 42783056 Common - hypothetical protein BCE_4008 11 COG4476 COG4476, Uncharacterized protein conserved in bacteria Function unknown 42782518 Common - hypothetical protein BCE_3467 15 COG3595 COG3595, Uncharacterized conserved protein Function unknown 42781824 Common - hypothetical protein BCE_2767 18 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 42782490 Common - hypothetical protein BCE_3437 72 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 42780307 Common cspA cold shock protein CspA BCE_1232 181 COG1278 CspC, Cold shock proteins Transcription 42783981 Common - ABC transporter, substrate-binding protein, putative BCE_4935 50 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 42779917 Common - type I restriction-modification system, M subunit BCE_0841 157 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 42782817 Common - hypothetical protein BCE_3767 44 COG2819 COG2819, Predicted hydrolase of the alpha/beta superfamily General function prediction only 42781202 Common - hypothetical protein BCE_2136 8 None None None 42781010 Common - hypothetical protein BCE_1941 48 COG1811 COG1811, Uncharacterized membrane protein, possible Na+ channel or pump General function prediction only 42781765 Common - hypothetical protein BCE_2707 11 None None None 42783129 Common - hypothetical protein BCE_4082 3 None None None 42784361 Common - chromate ion transporter BCE_5316 114 COG2059 ChrA, Chromate transport protein ChrA Inorganic ion transport and metabolism 42781055 Common - transcriptional regulator, TetR family BCE_1986 89 COG1309 AcrR, Transcriptional regulator Transcription 42782430 Pathogen - hypothetical protein BCE_3377 1 None None None 42779763 Common - iron compound ABC transporter, permease protein BCE_0685 190 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42783434 Common - hypothetical protein BCE_4388 13 None None None 42779673 Common - hypothetical protein BCE_0593 3 None None None 42781920 Common - proline racemase, putative BCE_2863 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 42782224 Common - hypothetical protein BCE_3169 2 None None None 42784125 Common - hypothetical protein BCE_5079 70 COG0390 COG0390, ABC-type uncharacterized transport system, permease component General function prediction only 42782483 Pathogen - hypothetical protein BCE_3430 1 None None None 42780393 Common - hypothetical protein BCE_1319 3 None None None 42782548 Common - phosphoglycerate mutase, putative BCE_3497 85 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42781028 Common - hydrolase, alpha/beta fold family BCE_1959 59 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42784584 Common acpD azoreductase BCE_5539 97 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 42780185 Common - DNA repair exonuclease family protein BCE_1109 110 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 42783046 Common - PhoH family protein BCE_3998 196 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 42784202 Common - major facilitator family transporter BCE_5156 135 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779892 Common - phospholipase, putative BCE_0815 55 COG4667 COG4667, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 42782458 Common - hypothetical protein BCE_3405 24 COG3813 COG3813, Uncharacterized protein conserved in bacteria Function unknown 42784209 Common - hypothetical protein BCE_5163 55 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42780055 Common - enoyl-CoA hydratase BCE_0979 186 COG1024 CaiD, Enoyl-CoA hydratase/carnithine racemase Lipid metabolism 42782850 Pathogen - hypothetical protein BCE_3800 1 None None None 42780673 Common resB resB protein BCE_1599 44 COG1333 ResB, ResB protein required for cytochrome c biosynthesis Posttranslational modification, protein turnover, chaperones 42779228 Common - mrp protein BCE_0147 229 COG0489 Mrp, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 42779970 Common brnQ branched-chain amino acid transport system II carrier protein BCE_0894 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42783269 Common - amino acid ABC transporter, ATP-binding protein BCE_4223 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 42780159 Pathogen - hypothetical protein BCE_1083 1 None None None 42779742 Common - nicotinate phosphoribosyltransferase BCE_0664 115 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 42783274 Common - hypothetical protein BCE_4228 8 None None None 42783872 Common - hypothetical protein BCE_4826 158 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42781272 Common - respiratory nitrate reductase, alpha subunit, degenerate BCE_2207 110 COG5013 NarG, Nitrate reductase alpha subunit Energy production and conversion 42782329 Common paiA acetyltransferase, GNAT family BCE_3275 46 COG0456 RimI, Acetyltransferases General function prediction only 42783487 Common - glyoxalase family protein BCE_4441 40 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 42782625 Common - hypothetical protein BCE_3575 7 COG3326 COG3326, Predicted membrane protein Function unknown 42782060 Common - hypothetical protein BCE_3004 12 COG0645 COG0645, Predicted kinase General function prediction only 42780321 Common gerPF spore germination protein GerPF BCE_1247 2 None None None 42779893 Pathogen - hypothetical protein BCE_0816 1 None None None 42779684 Pathogen - hypothetical protein BCE_0604 1 None None None 42779982 Common - purple acid phosphatase/fibronectin domain protein BCE_0906 18 COG1409 Icc, Predicted phosphohydrolases General function prediction only 42783202 Common deoB phosphopentomutase BCE_4156 71 COG1015 DeoB, Phosphopentomutase Carbohydrate transport and metabolism 42784176 Common gcvH glycine cleavage system protein H BCE_5130 188 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 42784328 Common - FMN reductase, NADPH-dependent BCE_5282 38 COG0655 WrbA, Multimeric flavodoxin WrbA General function prediction only 42784045 Common - transcriptional regulator, GntR family BCE_4999 120 COG2188 PhnF, Transcriptional regulators Transcription 42782119 Common - hypothetical protein BCE_3063 16 None None None 42779754 Common - CBS domain protein BCE_0676 220 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 42780826 Pathogen - hypothetical protein BCE_1753 1 None None None 42783555 Common - transcriptional regulator, ArsR family BCE_4509 112 COG0640 ArsR, Predicted transcriptional regulators Transcription 42779495 Common - Bacteriophage phi-105 protein-like protein BCE_0414 13 COG4824 COG4824, Phage-related holin (Lysis protein) General function prediction only 42782084 Common proA gamma-glutamyl phosphate reductase BCE_3028 191 COG0014 ProA, Gamma-glutamyl phosphate reductase Amino acid transport and metabolism 42779989 Common murQ N-acetylmuramic acid-6-phosphate etherase BCE_0913 83 COG2103 COG2103, Predicted sugar phosphate isomerase General function prediction only 42783151 Common mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase BCE_4104 18 COG4359 COG4359, Uncharacterized conserved protein Function unknown 42780487 Common - DNA-binding response regulator BCE_1413 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782472 Common - hypothetical protein BCE_3419 2 None None None 42782778 Common - hypothetical protein BCE_3728 13 COG3595 COG3595, Uncharacterized conserved protein Function unknown 42781647 Common - Methyltransferase, putative BCE_2586 2 None None None 42781834 Common - acetyltransferase, GNAT family BCE_2777 12 COG0456 RimI, Acetyltransferases General function prediction only 42783330 Common - lipoate-protein ligase A, putative BCE_4284 93 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 42782275 Common - Sterol-regulatory element binding protein (SREBP) site 2 protease family protein BCE_3220 29 None None None 42783419 Pathogen - hypothetical protein BCE_4373 1 None None None 42783612 Pathogen - hypothetical protein BCE_4566 1 None None None 42779341 Common hppD 4-hydroxyphenylpyruvate dioxygenase BCE_0260 78 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 42779977 Common - hypothetical protein BCE_0901 5 COG3339 COG3339, Uncharacterized conserved protein Function unknown 42782882 Pathogen - hypothetical protein BCE_3832 1 None None None 42779418 Common - hypothetical protein BCE_0337 187 COG0730 COG0730, Predicted permeases General function prediction only 42781080 Common - branched-chain amino acid ABC transporter, ATP-binding protein BCE_2011 249 COG0411 LivG, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 42781229 Common alr alanine racemase BCE_2163 201 COG0787 Alr, Alanine racemase Cell envelope biogenesis, outer membrane 42782569 Common - FAD-binding monooxygenase, PheA/TfdB family BCE_3518 64 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 42781747 Common - hypothetical protein BCE_2689 102 COG2378 COG2378, Predicted transcriptional regulator Transcription 42779334 Common Cof2 hydrolase, haloacid dehalogenase-like family BCE_0253 124 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42781714 Common - permease, putative BCE_2655 77 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780569 Pathogen - hypothetical protein BCE_1495 1 None None None 42781455 Pathogen - hypothetical protein BCE_2392 1 None None None 42784320 Common - hypothetical protein BCE_5274 3 None None None 42781935 Common - mandelate racemase/muconate lactonizing enzyme family protein BCE_2879 147 COG4948 COG4948, L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily Cell envelope biogenesis, outer membrane / General function prediction only 42781016 Common - methyl-accepting/DNA response regulator, putative BCE_1947 39 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 42783026 Common - hypothetical protein BCE_3978 3 None None None 42783833 Common - transcriptional regulator, LysR family BCE_4787 192 COG0583 LysR, Transcriptional regulator Transcription 42781220 Common - aldehyde dehydrogenase BCE_2154 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42781601 Pathogen - hypothetical protein BCE_2540 1 None None None 42781566 Common - tetracycline-efflux transporter, putative BCE_2504 106 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782655 Common - transcription antiterminator, LytR family BCE_3605 63 COG1316 LytR, Transcriptional regulator Transcription 42783476 Common - hydrolase, alpha/beta fold family BCE_4430 176 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783668 Pathogen - hypothetical protein BCE_4622 1 None None None 42781524 Common - transcriptional regulator, MarR family, putative BCE_2462 56 COG1846 MarR, Transcriptional regulators Transcription 42782204 Common - Tn554-related, transposase C BCE_3149 9 None None None 42782424 Common - hypothetical protein BCE_3371 2 None None None 42780081 Pathogen - hypothetical protein BCE_1005 1 None None None 42780096 Common - hypothetical protein BCE_1020 6 None None None 42782799 Pathogen - hypothetical protein BCE_3749 1 None None None 42780641 Common - methlytransferase, UbiE/COQ5 family BCE_1567 220 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42782259 Pathogen - hypothetical protein BCE_3204 1 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 42782252 Common - streptothricin acetyltransferase, putative BCE_3197 37 COG0456 RimI, Acetyltransferases General function prediction only 42780484 Common glcD glycolate oxidase, subunit GlcD BCE_1410 201 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 42783840 Pathogen - hypothetical protein BCE_4794 1 None None None 42781887 Common - methylase BCE_2830 204 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42783112 Common - alpha-amylase BCE_4065 176 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 42779279 Common - alcohol dehydrogenase, zinc-containing BCE_0198 191 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 161511027 Common - chlorohydrolase BCE_1951 177 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 42781723 Common - glycosyl transferase, putative BCE_2664 42 COG1819 COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase Carbohydrate transport and metabolism / Signal transduction mechanisms 42782660 Common - ABC transporter, ATP-binding protein BCE_3610 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42784403 Common opuD glycine betaine transporter BCE_5358 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 42780918 Pathogen - hypothetical protein BCE_1848 1 None None None 42779553 Common argF ornithine carbamoyltransferase BCE_0473 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 42784106 Common pepA leucyl aminopeptidase BCE_5060 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 42781244 Common - acetyltransferase, GNAT family BCE_2178 8 COG0456 RimI, Acetyltransferases General function prediction only 42784600 Common - glycosyl transferase domain protein BCE_5555 20 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42784638 Pathogen - hypothetical protein BCE_5593 1 None None None 42781864 Common - hypothetical protein BCE_2807 35 COG2320 GrpB, Uncharacterized conserved protein Function unknown 42782724 Common - hypothetical protein BCE_3674 203 COG0069 GltB, Glutamate synthase domain 2 Amino acid transport and metabolism 42782525 Pathogen - hypothetical protein BCE_3474 1 None None None 42783957 Pathogen - hypothetical protein BCE_4911 1 None None None 42782340 Common - hypothetical protein BCE_3287 4 None None None 42783575 Pathogen - hypothetical protein BCE_4529 1 None None None 42783443 Common hrcA heat-inducible transcription repressor BCE_4397 149 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 42780108 Pathogen - hypothetical protein BCE_1032 1 None None None 42782762 Common - hypothetical protein BCE_3712 3 None None None 42779489 Common - hypothetical protein BCE_0408 4 None None None 42782897 Common ribC bifunctional riboflavin kinase/FMN adenylyltransferase BCE_3847 211 COG0196 RibF, FAD synthase Coenzyme metabolism 42779871 Common - peptidase, M23/M37 family BCE_0794 191 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 42782807 Common - acetyltransferase, GNAT family, putative BCE_3757 46 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42784414 Common - competence transcription factor, degenerate BCE_5369 4 COG4903 ComK, Genetic competence transcription factor Transcription 42782837 Common - hypothetical protein BCE_3787 1 None None None 42783744 Pathogen - hypothetical protein BCE_4698 1 None None None 42783229 Pathogen - hypothetical protein BCE_4183 1 None None None 42780604 Common hisF imidazole glycerol phosphate synthase subunit HisF BCE_1530 215 COG0107 HisF, Imidazoleglycerol-phosphate synthase Amino acid transport and metabolism 42781187 Common - hypothetical protein BCE_2121 8 COG3689 COG3689, Predicted membrane protein Function unknown 42784185 Common - hypothetical protein BCE_5139 6 None None None 42784656 Common - metallo-beta-lactamase family protein BCE_5611 62 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 42781434 Pathogen - hypothetical protein BCE_2371 1 None None None 42783626 Pathogen - hypothetical protein BCE_4580 1 None None None 42779490 Common - hypothetical protein BCE_0409 30 COG5412 COG5412, Phage-related protein Function unknown 42781089 Common - bacterial luciferase family protein BCE_2020 61 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 42783367 Common comGA comG operon protein 1 BCE_4321 160 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 42779654 Common sspK acid-soluble spore protein K BCE_0574 2 None None None 42781198 Pathogen - hypothetical protein BCE_2132 1 None None None 42781598 Pathogen - hypothetical protein BCE_2537 1 None None None 42781719 Common - hypothetical protein BCE_2660 17 COG5553 COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily General function prediction only 42784275 Pathogen - hypothetical protein BCE_5229 1 None None None 42784459 Common - hypothetical protein BCE_5414 7 COG4836 COG4836, Predicted membrane protein Function unknown 42781701 Pathogen - phage transcriptional regulator, ArpU family subfamily BCE_2642 1 None None None 42783027 Common - hypothetical protein BCE_3979 11 COG4471 COG4471, Uncharacterized protein conserved in bacteria Function unknown 42779345 Common - major facilitator family transporter BCE_0264 197 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 42781580 Common - transcriptional regulator, MarR family BCE_2518 52 COG1846 MarR, Transcriptional regulators Transcription 42781040 Pathogen - hypothetical protein BCE_1971 1 None None None 42782719 Common - glyoxalase family protein, putative BCE_3669 17 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42779374 Common - xanthine/uracil permease family protein BCE_0293 135 COG2252 COG2252, Permeases General function prediction only 42779578 Common - hypothetical protein BCE_0498 26 None None None 42780959 Common - N-acetylmuramoyl-L-alanine amidase, family 4 BCE_1890 30 COG4193 LytD, Beta- N-acetylglucosaminidase Carbohydrate transport and metabolism 42780990 Pathogen - hypothetical protein BCE_1921 2 None None None 42781661 Common - 4-hydroxyphenylacetate 3-hydroxylase family family BCE_2601 50 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 42782330 Common paiB protease synthase and sporulation negative regulatory protein PAI 2 BCE_3276 60 COG2808 PaiB, Transcriptional regulator Transcription 42780247 Pathogen - hypothetical protein BCE_1172 1 None None None 42782735 Pathogen - hypothetical protein BCE_3685 1 None None None 42781340 Common - degV family protein BCE_2276 56 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 42783935 Common - hypothetical protein BCE_4889 43 COG2311 COG2311, Predicted membrane protein Function unknown 42783146 Common mtnK methylthioribose kinase BCE_4099 28 COG4857 COG4857, Predicted kinase General function prediction only 42782005 Pathogen - hypothetical protein BCE_2949 1 None None None 42783108 Common malR maltose operon transcriptional repressor BCE_4061 129 COG1609 PurR, Transcriptional regulators Transcription 42783765 Common phoR sensory box histidine kinase PhoR BCE_4719 223 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42781790 Pathogen - hypothetical protein BCE_2733 1 None None None 42781409 Pathogen - hypothetical protein BCE_2346 1 None None None 42783903 Common - transcriptional regulator, CarD family BCE_4857 83 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 42782755 Common - mutT/nudix family protein BCE_3705 56 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42779327 Pathogen - hypothetical protein BCE_0246 1 None None None 42779836 Pathogen - hypothetical protein BCE_0758 1 None None None 42783709 Pathogen - hypothetical protein BCE_4663 1 None None None 42779819 Common - multidrug resistance protein, putative BCE_0741 228 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779951 Common - transcription antiterminator, LytR family BCE_0875 63 COG1316 LytR, Transcriptional regulator Transcription 42780347 Common - nucleotide-binding protein BCE_1273 107 COG1666 COG1666, Uncharacterized protein conserved in bacteria Function unknown 42779295 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_0214 186 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42781917 Common aldA aldehyde dehydrogenase BCE_2860 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42782233 Common - sensory box histidine kinase VicK, putative BCE_3178 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779249 Common - hypothetical protein BCE_0168 150 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 42779569 Common - methyl-accepting chemotaxis protein BCE_0489 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42779363 Common gcP O-sialoglycoprotein endopeptidase BCE_0282 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 42779756 Common lldP L-lactate permease BCE_0678 103 COG1620 LldP, L-lactate permease Energy production and conversion 42779590 Common proS prolyl-tRNA synthetase BCE_0510 196 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42784332 Common - hypothetical protein BCE_5286 12 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 42783530 Common - hesA/moeB/thiF family protein BCE_4484 223 COG1179 COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 Coenzyme metabolism 42781905 Common - peptidase, U32 family BCE_2848 18 COG3757 Acm, Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Cell envelope biogenesis, outer membrane 42780664 Common mprF virulence factor MprF BCE_1590 60 COG2898 COG2898, Uncharacterized conserved protein Function unknown 42780022 Common - amino acid ABC transporter, permease protein BCE_0946 174 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 42783929 Common - permease, putative BCE_4883 97 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780440 Common - transposase, IS605 OrfB domain protein BCE_1366 72 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42782915 Common frr ribosome recycling factor BCE_3865 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 42780926 Common - hypothetical protein BCE_1856 52 COG2733 COG2733, Predicted membrane protein Function unknown 42782931 Common sipS signal peptidase I S BCE_3881 206 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 42783425 Common - hypothetical protein BCE_4379 2 None None None 42780174 Common - transposase, IS605 family BCE_1098 67 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42783753 Common thrS threonyl-tRNA synthetase BCE_4707 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42779500 Common - DNA recombinase, putative BCE_0419 86 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42780333 Common asnO asparagine synthetase, glutamine-hydrolyzing BCE_1259 160 COG0367 AsnB, Asparagine synthase (glutamine-hydrolyzing) Amino acid transport and metabolism 161511019 Common rpsT 30S ribosomal protein S20 BCE_4403 209 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 42779732 Common fdhD formate dehydrogenase accessory protein BCE_0654 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 42780461 Pathogen - hypothetical protein BCE_1387 1 None None None 42781322 Common - ABC transporter, ATP-binding protein BCE_2258 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42783691 Common sdhC succinate dehydrogenase, cytochrome b558 subunit BCE_4645 18 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 42780729 Common - hypothetical protein BCE_1655 2 None None None 42782654 Common dctA C4-dicarboxylate transporter DctA BCE_3604 162 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 42779523 Common - 5-methylthioribose kinase, putative BCE_0442 5 COG4857 COG4857, Predicted kinase General function prediction only 42780634 Common - PspA/IM30 family protein BCE_1560 44 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 42784387 Common lldP L-lactate permease BCE_5342 101 COG1620 LldP, L-lactate permease Energy production and conversion 42783531 Common aspS aspartyl-tRNA synthetase BCE_4485 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42780928 Common - hypothetical protein BCE_1858 3 None None None 42783453 Common comEB ComE operon protein 2 BCE_4407 90 COG2131 ComEB, Deoxycytidylate deaminase Nucleotide transport and metabolism 42779331 Common - oligopeptide ABC transporter, permease protein BCE_0250 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42779838 Common - hypothetical protein BCE_0760 35 COG5373 COG5373, Predicted membrane protein Function unknown 42781048 Common - hypothetical protein BCE_1979 9 None None None 42780784 Common - acetyltransferase, GNAT family BCE_1710 23 COG3393 COG3393, Predicted acetyltransferase General function prediction only 42782040 Common - PTS system, Lactose/Cellobiose specific IIB subunit BCE_2984 32 COG3711 BglG, Transcriptional antiterminator Transcription 42779930 Common - hypothetical protein BCE_0854 8 None None None 42781421 Pathogen - hypothetical protein BCE_2358 1 None None None 42781886 Common - hypothetical protein BCE_2829 13 None None None 42782715 Common - hypothetical protein BCE_3665 16 COG5460 COG5460, Uncharacterized conserved protein Function unknown 42780628 Common - peptidase, M23/M37 family BCE_1554 187 COG4942 COG4942, Membrane-bound metallopeptidase Cell division and chromosome partitioning 42780398 Common - Ser/Thr protein phosphatase family protein BCE_1324 86 None None None 42780983 Common - 3-oxoacyl-(acyl carrier protein) synthase III BCE_1914 204 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 42783153 Common - 5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase, putative BCE_4106 37 COG1791 COG1791, Uncharacterized conserved protein, contains double-stranded beta-helix domain Function unknown 42779628 Common - acetylornithine deacetylase BCE_0548 204 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 42781306 Common ileS isoleucyl-tRNA synthetase BCE_2241 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42784037 Common - permease, putative BCE_4991 17 COG0628 PerM, Predicted permease General function prediction only 42784415 Pathogen - RNA polymerase factor sigma-70 BCE_5370 2 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42781075 Common - hypothetical protein BCE_2006 15 COG0628 PerM, Predicted permease General function prediction only 42779847 Common qoxD quinol oxidase, subunit IV BCE_0769 6 COG3125 CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 Energy production and conversion 42781365 Pathogen - hypothetical protein BCE_2301 1 None None None 42779365 Common - ABC transporter, ATP-binding protein BCE_0284 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42779552 Common arcA arginine deiminase BCE_0472 60 COG2235 ArcA, Arginine deiminase Amino acid transport and metabolism 42782643 Pathogen - hypothetical protein BCE_3593 1 None None None 42782779 Common - hypothetical protein BCE_3729 18 COG4709 COG4709, Predicted membrane protein Function unknown 42779302 Common - molybdenum ABC transporter, permease protein, putative BCE_0221 223 COG4149 ModC, ABC-type molybdate transport system, permease component Inorganic ion transport and metabolism 42783249 Common argC N-acetyl-gamma-glutamyl-phosphate reductase BCE_4203 184 COG0002 ArgC, Acetylglutamate semialdehyde dehydrogenase Amino acid transport and metabolism 42784481 Common atpB F0F1 ATP synthase subunit A BCE_5436 122 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 42782896 Common rpsO 30S ribosomal protein S15 BCE_3846 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 42782349 Common - hypothetical protein BCE_3296 2 None None None 42783638 Common - transcriptional regulator, TetR family BCE_4592 4 COG1309 AcrR, Transcriptional regulator Transcription 42782046 Common - membrane protein, MmpL family, putative BCE_2990 69 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 42783693 Common uvrC excinuclease ABC subunit C BCE_4647 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 42780663 Common - hypothetical protein BCE_1589 3 None None None 42783148 Common - hydrolase, carbon-nitrogen family BCE_4101 207 COG0388 COG0388, Predicted amidohydrolase General function prediction only 42783213 Common - hypothetical protein BCE_4167 43 COG2320 GrpB, Uncharacterized conserved protein Function unknown 42783282 Common buk butyrate kinase BCE_4236 137 COG3426 COG3426, Butyrate kinase Energy production and conversion 42779087 Common gyrA DNA gyrase subunit A BCE_0006 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 42782820 Common - iron compound ABC transporter, permease protein BCE_3770 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42781387 Common - hypothetical protein BCE_2324 10 COG5506 COG5506, Uncharacterized conserved protein Function unknown 42779101 Common dnaX DNA polymerase III subunits gamma and tau BCE_0020 249 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 42784294 Pathogen - lipoprotein, putative BCE_5248 1 None None None 42782321 Common - ABC transporter, ATP-binding protein BCE_3267 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42784256 Common - pyridine nucleotide-disulphide oxidoreductase BCE_5210 176 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 42781895 Common - hypothetical protein BCE_2838 37 COG3502 COG3502, Uncharacterized protein conserved in bacteria Function unknown 42783196 Common - transcriptional regulator, MarR family BCE_4150 95 COG1846 MarR, Transcriptional regulators Transcription 42783256 Common - ribonuclease Z BCE_4210 133 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 42783568 Common - transcriptional regulator, ArsR family BCE_4522 40 COG0640 ArsR, Predicted transcriptional regulators Transcription 42782721 Common - phospholipase/carboxylesterase family protein BCE_3671 36 COG0400 COG0400, Predicted esterase General function prediction only 42779637 Common - hypothetical protein BCE_0557 2 None None None 42780946 Common - helicase, putative BCE_1877 137 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 42781192 Common - oxidoreductase, putative BCE_2126 72 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 42784495 Pathogen - hypothetical protein BCE_5450 1 None None None 42784157 Common - hypothetical protein BCE_5111 13 None None None 42782035 Common - hypothetical protein BCE_2979 96 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42782047 Common - transcriptional regulator, TetR family BCE_2991 108 COG1309 AcrR, Transcriptional regulator Transcription 42783277 Common - cell division protein, FtsW/RodA/SpoVE family BCE_4231 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 42779405 Common purF amidophosphoribosyltransferase BCE_0324 240 COG0034 PurF, Glutamine phosphoribosylpyrophosphate amidotransferase Nucleotide transport and metabolism 42782742 Pathogen - hypothetical protein BCE_3692 1 None None None 161511028 Common ndk nucleoside diphosphate kinase BCE_1642 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 42782474 Common - rrf2 family protein BCE_3421 46 COG1959 COG1959, Predicted transcriptional regulator Transcription 42782862 Common - phosphoesterase family protein BCE_3812 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 42781497 Common - hypothetical protein BCE_2435 7 None None None 42784260 Common - methyl-accepting chemotaxis protein BCE_5214 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42780793 Common - hypothetical protein BCE_1719 2 None None None 42780194 Common - RNA polymerase sigma-70 factor, ECF subfamily, putative BCE_1118 165 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42781467 Common - drug resistance transporter, EmrB/QacA family BCE_2404 219 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779861 Common - phosphate ABC transporter, phosphate-binding protein, putative BCE_0784 167 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 42779693 Common opuD glycine betaine transporter BCE_0614 96 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 42784472 Common - hypothetical protein BCE_5427 10 COG5523 COG5523, Predicted integral membrane protein Function unknown 42784008 Pathogen - hypothetical protein BCE_4962 1 None None None 42780080 Common - oligopeptide ABC transporter, ATP-binding protein BCE_1004 249 COG4608 AppF, ABC-type oligopeptide transport system, ATPase component Amino acid transport and metabolism 42782531 Common - hypothetical protein BCE_3480 5 None None None 42783201 Common - purine nucleoside phosphorylase BCE_4155 161 COG0005 Pnp, Purine nucleoside phosphorylase Nucleotide transport and metabolism 42779994 Common - hypothetical protein BCE_0918 2 None None None 42782023 Common - TPR domain protein BCE_2967 11 None None None 42782970 Common - hypothetical protein BCE_3922 2 None None None 42784669 Common ssb single-strand DNA-binding protein BCE_5624 215 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 42780470 Common - immune inhibitor A metalloprotease BCE_1396 18 COG4412 COG4412, Uncharacterized protein conserved in bacteria Function unknown 42780299 Common - transporter, EamA family BCE_1224 90 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 42780131 Common - hypothetical protein BCE_1055 1 None None None 42784011 Common feoB ferrous iron transport protein B BCE_4965 158 COG0370 FeoB, Fe2+ transport system protein B Inorganic ion transport and metabolism 42780090 Pathogen - hypothetical protein BCE_1014 1 None None None 42779905 Common gerYA spore germination protein GerYA BCE_0829 15 None None None 42781382 Pathogen - hypothetical protein BCE_2318 2 None None None 42781950 Pathogen - hypothetical protein BCE_2894 1 None None None 42783783 Common - hypothetical protein BCE_4737 3 None None None 42780590 Common ilvE branched-chain amino acid aminotransferase BCE_1516 212 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 42783478 Common - hypothetical protein BCE_4432 2 None None None 42779308 Common - transporter, EamA family BCE_0227 40 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42779535 Common - DNA binding domain, excisionase family BCE_0454 2 None None None 42783058 Pathogen - hypothetical protein BCE_4011 1 None None None 42782792 Pathogen - hypothetical protein BCE_3742 1 None None None 42784029 Common - ribosomal RNA adenine dimethylase domain protein BCE_4983 42 COG3963 COG3963, Phospholipid N-methyltransferase Lipid metabolism 42779696 Common - hypothetical protein BCE_0617 4 None None None 42782096 Common - DNA-binding protein BCE_3040 52 COG3655 COG3655, Predicted transcriptional regulator Transcription 42784060 Common - hydrolase, alpha/beta fold family BCE_5014 189 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42780855 Common - flagellar motor switch protein BCE_1782 5 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 42781172 Common - NADH:flavin oxidoreductase / NADH oxidase family protein BCE_2106 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 42783160 Pathogen - hypothetical protein BCE_4113 1 None None None 42784398 Common - enterotoxin BCE_5353 134 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 42781538 Common - hypothetical protein BCE_2476 2 None None None 42781471 Common - hypothetical protein BCE_2408 4 None None None 42781602 Common - hypothetical protein BCE_2541 109 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 42781612 Common mvaB hydroxymethylglutaryl-CoA lyase BCE_2551 181 COG0119 LeuA, Isopropylmalate/homocitrate/citramalate synthases Amino acid transport and metabolism 42782676 Common - 4-hydroxybenzoyl-CoA thioesterase, putative BCE_3626 104 COG0824 FcbC, Predicted thioesterase General function prediction only 42784229 Common - neutral protease B, Bacillolysin BCE_5183 45 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 42782384 Pathogen - hypothetical protein BCE_3331 1 None None None 42783271 Common - amino acid ABC transporter, amino acid-binding protein BCE_4225 183 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 42780163 Common - hypothetical protein BCE_1087 24 COG2193 Bfr, Bacterioferritin (cytochrome b1) Inorganic ion transport and metabolism 42783851 Common - prolyl aminopeptidase BCE_4805 71 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42780648 Pathogen - hypothetical protein BCE_1574 1 None None None 42783539 Common recJ single-stranded-DNA-specific exonuclease RecJ BCE_4493 194 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 42780191 Common - glyoxalase family protein BCE_1115 36 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 42780079 Common - oligopeptide ABC transporter, ATP-binding protein BCE_1003 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 42783065 Common pdhD dihydrolipoamide dehydrogenase BCE_4018 246 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 42784139 Common - hypothetical protein BCE_5093 24 None None None 42784434 Common - O-antigen polymerase (wzy) BCE_5389 10 COG3307 RfaL, Lipid A core - O-antigen ligase and related enzymes Cell envelope biogenesis, outer membrane 42781372 Pathogen - hypothetical protein BCE_2308 1 None None None 42781684 Common - lipase, putative BCE_2625 10 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 42784467 Common nuoD NADH dehydrogenase subunit D BCE_5422 191 COG0649 NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 Energy production and conversion 42782173 Common - hypothetical protein BCE_3118 28 COG3819 COG3819, Predicted membrane protein Function unknown 42780097 Common - helicase, SNF2 family BCE_1021 116 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 42781863 Common - short chain dehydrogenase BCE_2806 224 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42782944 Common fabD acyl-carrier-protein S-malonyltransferase BCE_3894 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 42779784 Common - sodium/alanine symporter family protein BCE_0706 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 42784273 Common - DNA-binding response regulator BCE_5227 211 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42779645 Common - hypothetical protein BCE_0565 50 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 42782767 Common - hypothetical protein BCE_3717 1 None None None 42780368 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II BCE_1294 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42784502 Common tdk thymidine kinase BCE_5457 98 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 42783105 Common kinB sporulation kinase B BCE_4058 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42784301 Pathogen - hypothetical protein BCE_5255 1 None None None 42784579 Common metA homoserine O-succinyltransferase BCE_5534 64 COG1897 MetA, Homoserine trans-succinylase Amino acid transport and metabolism 42780037 Common - LPXTG-motif cell wall anchor domain protein BCE_0961 15 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 42779156 Common lysS lysyl-tRNA synthetase BCE_0075 249 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 42781099 Common - lipoprotein, putative BCE_2030 1 None None None 42782537 Common - iron compound ABC transporter, permease protein BCE_3486 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42782901 Common infB translation initiation factor IF-2 BCE_3851 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 42780935 Common - ABC transporter, ATP-binding protein BCE_1865 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42780650 Common - phosphate transporter family protein BCE_1576 166 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 42780952 Common dapG aspartate kinase BCE_1883 236 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 42782370 Common - NAD(P)H dehydrogenase, quinone family BCE_3317 80 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 42779209 Common rpmD 50S ribosomal protein L30 BCE_0128 155 COG1841 RpmD, Ribosomal protein L30/L7E Translation, ribosomal structure and biogenesis 42783076 Common - peptidase, M20/M25/M40 family BCE_4029 167 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 42780747 Common - hypothetical protein BCE_1673 5 COG5353 COG5353, Uncharacterized protein conserved in bacteria Function unknown 42784510 Common fba fructose-bisphosphate aldolase BCE_5465 179 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 42782738 Common - hypothetical protein BCE_3688 12 None None None 42783979 Pathogen - hypothetical protein BCE_4933 1 None None None 42782146 Pathogen - hypothetical protein BCE_3090 1 None None None 42782281 Pathogen - hypothetical protein BCE_3226 1 None None None 42781976 Common - bacterial extracellular solute-binding protein, family 5 BCE_2920 135 COG4533 COG4533, ABC-type uncharacterized transport system, periplasmic component General function prediction only 42784196 Common - conserved hypothetical protein TIGR00106 BCE_5150 44 COG0011 COG0011, Uncharacterized conserved protein Function unknown 42780186 Common - hypothetical protein BCE_1110 113 COG4717 COG4717, Uncharacterized conserved protein Function unknown 42783373 Pathogen - hypothetical protein BCE_4327 1 None None None 42781712 Pathogen - hypothetical protein BCE_2653 1 None None None 42784078 Common ldh L-lactate dehydrogenase BCE_5032 177 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 42779097 Common - deoxynucleoside kinase family protein BCE_0016 40 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 42779402 Common - phosphoribosylformylglycinamidine synthase subunit PurS BCE_0321 108 COG1828 PurS, Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component Nucleotide transport and metabolism 42782787 Common spoVK stage V sporulation protein K BCE_3737 133 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 42781571 Common - ATP-dependent RNA helicase, DEAD/DEAH box family BCE_2509 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 42780228 Common ecsB ABC transporter, permease protein EscB BCE_1153 12 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 42782448 Common - nucleotidyltransferase family protein BCE_3395 176 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 42781168 Common - spermidine acetyltransferase, putative BCE_2102 18 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780404 Pathogen - hypothetical protein BCE_1330 1 None None None 42783261 Pathogen - hypothetical protein BCE_4215 1 None None None 42783650 Common - Type II restriction endonuclease, putative BCE_4604 3 None None None 42784511 Common spo0F stage 0 sporulation protein F BCE_5466 224 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 42779612 Common - hypothetical protein BCE_0532 2 None None None 42781092 Common - transport ATP-binding protein CydC BCE_2023 249 COG4988 CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components Energy production and conversion / Posttranslational modification, protein turnover, chaperones 42781709 Pathogen - hypothetical protein BCE_2650 1 None None None 42782054 Common - bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase BCE_2998 188 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 42784103 Common gtaB UTP-glucose-1-phosphate uridylyltransferase BCE_5057 232 COG1210 GalU, UDP-glucose pyrophosphorylase Cell envelope biogenesis, outer membrane 42784515 Common rpoE DNA-directed RNA polymerase subunit delta BCE_5470 14 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 42781311 Common - hydrolase, alpha/beta fold family BCE_2247 129 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783922 Common gerHC spore germination protein GerHC BCE_4876 9 None None None 42779604 Common - heavy metal-transporting ATPase BCE_0524 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 42780329 Pathogen - hypothetical protein BCE_1255 1 None None None 42779726 Pathogen - hypothetical protein BCE_0648 1 None None None 42784593 Common - glycosyl transferase, WecB/TagA/CpsF family BCE_5548 111 COG1922 WecG, Teichoic acid biosynthesis proteins Cell envelope biogenesis, outer membrane 42781237 Common - acetyltransferase, GNAT family BCE_2171 35 COG0456 RimI, Acetyltransferases General function prediction only 42782110 Common - hypothetical protein BCE_3054 8 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 42779884 Pathogen - hypothetical protein BCE_0807 1 None None None 42780394 Common - hypothetical protein BCE_1320 46 COG2357 COG2357, Uncharacterized protein conserved in bacteria Function unknown 42783175 Common ribT ribT protein BCE_4128 5 None None None 42783494 Common - iron compound ABC transporter, ATP-binding protein BCE_4448 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 42784144 Common - hypothetical protein BCE_5098 7 COG2445 COG2445, Uncharacterized conserved protein Function unknown 42783963 Pathogen - hypothetical protein BCE_4917 1 None None None 42781354 Common - heat shock protein, Hsp20 family BCE_2290 153 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 42784676 Common soJ sporulation initiation inhibitor protein Soj BCE_5631 236 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 42783582 Common rplU 50S ribosomal protein L21 BCE_4536 201 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 42782530 Common - hypothetical protein BCE_3479 52 COG2120 COG2120, Uncharacterized proteins, LmbE homologs Function unknown 42782785 Common - hypothetical protein BCE_3735 133 COG2860 COG2860, Predicted membrane protein Function unknown 42781347 Common - substrate-binding family protein, putative BCE_2283 76 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42780837 Common flgC flagellar basal body rod protein FlgC BCE_1764 125 COG1558 FlgC, Flagellar basal body rod protein Cell motility and secretion 42782619 Common dhaS aldehyde dehydrogenase BCE_3569 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42779471 Common - hypothetical protein BCE_0390 8 None None None 42783734 Common - RNA methyltransferase, TrmH family BCE_4688 213 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 42780413 Common fabI enoyl-(acyl carrier protein) reductase BCE_1339 236 COG0623 FabI, Enoyl- acyl-carrier-protein 42781885 Common - hypothetical protein BCE_2828 4 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 42783081 Common - hypothetical protein BCE_4034 14 COG1978 COG1978, Uncharacterized protein conserved in bacteria Function unknown 42783607 Common loN ATP-dependent protease La 1 BCE_4561 205 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 42784429 Common - NAD dependent epimerase/dehydratase family protein BCE_5384 233 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42781121 Common thrB homoserine kinase BCE_2053 124 COG0083 ThrB, Homoserine kinase Amino acid transport and metabolism 42779880 Common - thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein BCE_0803 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 42783893 Common - transcriptional regulator, DeoR family BCE_4847 2 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 42780102 Common - ParB-like nuclease domain protein BCE_1026 9 COG1475 Spo0J, Predicted transcriptional regulators Transcription 42782351 Common - hypothetical protein BCE_3298 11 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 42780880 Pathogen - lipoprotein, putative BCE_1809 1 None None None 42779655 Common - hypothetical protein BCE_0575 2 None None None 42784170 Common - ABC transporter, permease protein BCE_5124 100 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 42780808 Common - hypothetical protein BCE_1734 60 COG1434 COG1434, Uncharacterized conserved protein Function unknown 42783776 Common pfkA 6-phosphofructokinase BCE_4730 161 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 42780267 Pathogen - hypothetical protein BCE_1192 1 None None None 42781775 Common - oxalate:formate antiporter, putative BCE_2718 92 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42783511 Common - O-methyltransferase family protein BCE_4465 107 COG4122 COG4122, Predicted O-methyltransferase General function prediction only 42782632 Common - thiamine/molybdopterin biosynthesis MoeB-like protein BCE_3582 223 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 42780355 Common - hypothetical protein BCE_1281 2 None None None 42782417 Pathogen - hypothetical protein BCE_3364 1 None None None 42780813 Common - hypothetical protein BCE_1739 9 COG4189 COG4189, Predicted transcriptional regulator Transcription 42781691 Common - hypothetical protein BCE_2632 2 None None None 42779703 Common - lipoprotein, putative BCE_0624 11 COG4314 NosL, Predicted lipoprotein involved in nitrous oxide reduction Energy production and conversion 42779595 Common - tellurium resistance protein BCE_0515 30 COG2310 TerZ, Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Signal transduction mechanisms 42779172 Common - RNA methyltransferase, TrmH family, group 3 BCE_0091 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 42779555 Common arcC carbamate kinase BCE_0475 66 COG0549 ArcC, Carbamate kinase Amino acid transport and metabolism 42780286 Common - hypothetical protein BCE_1211 74 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 42779533 Common - pyridine nucleotide-disulfide oxidoreductase family protein BCE_0452 247 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 42780753 Common recU Holliday junction-specific endonuclease BCE_1679 17 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 42780694 Common - N-acetylmuramoyl-L-alanine amidase, family 2 BCE_1620 6 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42781476 Pathogen - hypothetical protein BCE_2413 1 None None None 42781591 Pathogen - hypothetical protein BCE_2530 1 None None None 42780681 Common fer ferredoxin BCE_1607 5 COG1141 Fer, Ferredoxin Energy production and conversion 42782210 Common - hypothetical protein BCE_3155 4 None None None 42784215 Common - DNA-binding protein BCE_5169 70 COG1476 COG1476, Predicted transcriptional regulators Transcription 42779519 Common - hypothetical protein BCE_0438 3 None None None 42783302 Common - hypothetical protein BCE_4256 33 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 42779114 Common - hypothetical protein BCE_0033 76 COG2827 COG2827, Predicted endonuclease containing a URI domain DNA replication, recombination, and repair 42780408 Common - streptomycin biosynthesis StrF domain protein BCE_1334 4 None None None 42780633 Common - hypothetical protein BCE_1559 3 None None None 42782107 Common - hypothetical protein BCE_3051 18 COG1695 COG1695, Predicted transcriptional regulators Transcription 42784623 Common - nitric-oxide synthase, oxygenase subunit BCE_5578 11 COG4362 COG4362, Nitric oxide synthase, oxygenase domain Inorganic ion transport and metabolism / Amino acid transport and metabolism 42784683 Common rnpA ribonuclease P BCE_5638 96 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 42784488 Common - ribose-5-phosphate isomerase B BCE_5443 128 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 42781144 Common - intracellular serine protease BCE_2078 144 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 42783723 Pathogen - hypothetical protein BCE_4677 1 None None None 42781478 Common - hypothetical protein BCE_2416 3 None None None 42784003 Pathogen - hypothetical protein BCE_4957 1 None None None 42780147 Common - hypothetical protein BCE_1071 171 COG1959 COG1959, Predicted transcriptional regulator Transcription 42781262 Pathogen - hypothetical protein BCE_2196 1 None None None 42779796 Common - sensor histidine kinase BCE_0718 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 42780338 Common - cation-transporting ATPase, E1-E2 family BCE_1264 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 42780732 Common - hypothetical protein BCE_1658 50 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42781679 Common - ABC transporter, ATP-binding protein, putative BCE_2620 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42780451 Common - hypothetical protein BCE_1377 43 COG1944 COG1944, Uncharacterized conserved protein Function unknown 42779191 Common rplC 50S ribosomal protein L3 BCE_0110 249 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 42782918 Common rpsB 30S ribosomal protein S2 BCE_3868 243 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 42783718 Common - hypothetical protein BCE_4672 4 COG5386 COG5386, Cell surface protein Cell envelope biogenesis, outer membrane 42781111 Pathogen - hypothetical protein BCE_2043 1 None None None 42783306 Common spoIIIAG stage III sporulation protein AG BCE_4260 15 None None None 42783548 Common tgt queuine tRNA-ribosyltransferase BCE_4502 231 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 42780777 Common - acetyltransferase, GNAT family BCE_1703 33 COG0456 RimI, Acetyltransferases General function prediction only 42784237 Common - general stress protein 20U BCE_5191 147 COG0783 Dps, DNA-binding ferritin-like protein (oxidative damage protectant) Inorganic ion transport and metabolism 42780447 Common - acetyltransferase, GNAT family BCE_1373 13 COG5628 COG5628, Predicted acetyltransferase General function prediction only 42781853 Pathogen - hypothetical protein BCE_2796 1 None None None 42783821 Common - thiol peroxidase BCE_4775 108 COG2077 Tpx, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 42784642 Common - hypothetical protein BCE_5597 51 COG0535 COG0535, Predicted Fe-S oxidoreductases General function prediction only 42780703 Common - hypothetical protein BCE_1629 9 None None None 42781626 Common - conserved hypothetical protein TIGR00488 BCE_2565 35 COG1713 COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism Coenzyme metabolism 42782148 Common - transporter, EamA family BCE_3092 203 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42783649 Pathogen - hypothetical protein BCE_4603 1 None None None 42782960 Common priA primosome assembly protein PriA BCE_3911 213 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 42784617 Common - murein hydrolase regulator LrgA BCE_5572 16 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 42780642 Common - ribosomal protein L5 domain protein BCE_1568 2 None None None 42784447 Pathogen - hypothetical protein BCE_5402 1 None None None 42782685 Common acnA aconitate hydratase BCE_3635 222 COG1048 AcnA, Aconitase A Energy production and conversion 42783242 Common - transcriptional regulator, MarR family BCE_4196 75 COG1846 MarR, Transcriptional regulators Transcription 42780735 Common dapB dihydrodipicolinate reductase BCE_1661 216 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism 42781981 Common - hypothetical protein BCE_2925 2 None None None 42782155 Common - phosphatase family protein BCE_3099 82 COG0622 COG0622, Predicted phosphoesterase General function prediction only 42784350 Common - conserved hypothetical protein TIGR00257 BCE_5305 134 COG1739 COG1739, Uncharacterized conserved protein Function unknown 42780477 Common - transporter, putative BCE_1403 72 COG2409 COG2409, Predicted drug exporters of the RND superfamily General function prediction only 42784649 Pathogen - hypothetical protein BCE_5604 1 None None None 42781483 Common - ABC transporter, permease protein, putative BCE_2421 16 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42782217 Common - hypothetical protein BCE_3162 26 COG3224 COG3224, Uncharacterized protein conserved in bacteria Function unknown 42781151 Common - hypothetical protein BCE_2085 2 None None None 42782949 Common - hypothetical protein BCE_3899 40 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 42783995 Common cydA cytochrome d ubiquinol oxidase, subunit I BCE_4949 166 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 42783990 Common - hypothetical protein BCE_4944 1 None None None 42780532 Common - exsB protein BCE_1458 176 COG0603 COG0603, Predicted PP-loop superfamily ATPase General function prediction only 42782665 Common - oxidoreductase, Gfo/Idh/MocA family BCE_3615 190 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 42782068 Common - sugar ABC transporter, sugar-binding protein, putative BCE_3012 76 COG1879 RbsB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 42782364 Common - hypothetical protein BCE_3311 2 None None None 42779465 Common - virulence-associated protein E BCE_0384 33 COG5545 COG5545, Predicted P-loop ATPase and inactivated derivatives General function prediction only 42783404 Common ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase BCE_4358 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 42780110 Common - PspA/IM30 family protein BCE_1034 66 COG1842 PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription Transcription / Signal transduction mechanisms 42782100 Common - response regulator BCE_3044 33 COG3279 LytT, Response regulator of the LytR/AlgR family Transcription / Signal transduction mechanisms 42783446 Common lepA GTP-binding protein LepA BCE_4400 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 42780234 Common - hypothetical protein BCE_1159 31 COG3428 COG3428, Predicted membrane protein Function unknown 42782392 Common - IS231-related transposase BCE_3339 13 None None None 42783605 Common - organic hydroperoxide resistance protein BCE_4559 108 COG1764 OsmC, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 42781916 Common - sodium/alanine symporter family protein BCE_2859 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 42784175 Pathogen - hypothetical protein BCE_5129 1 None None None 42783637 Common - thiJ/pfpI family protein BCE_4591 86 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 42782240 Common - transcriptional regulator, PadR family domain protein BCE_3185 20 COG1695 COG1695, Predicted transcriptional regulators Transcription 42780527 Common - hypothetical protein BCE_1453 4 None None None 42782369 Pathogen - hypothetical protein BCE_3316 1 None None None 42784528 Common - sensor histidine kinase BCE_5483 147 COG4585 COG4585, Signal transduction histidine kinase Signal transduction mechanisms 42781843 Common - hypothetical protein BCE_2786 84 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 42780841 Common fliH flagellar assembly protein H BCE_1768 2 None None None 42780036 Common - hydrolase, haloacid dehalogenase-like family BCE_0960 114 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42781663 Pathogen - hypothetical protein BCE_2603 1 None None None 42782488 Common - acetyltransferase, GNAT family family BCE_3435 152 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42784165 Common - hypothetical protein BCE_5119 177 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 42784597 Common - methyl-accepting chemotaxis protein BCE_5552 149 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42782071 Common - ribose ABC transporter, ATP-binding protein, putative BCE_3015 249 COG1129 MglA, ABC-type sugar transport system, ATPase component Carbohydrate transport and metabolism 42780903 Pathogen - hypothetical protein BCE_1833 1 None None None 42780515 Common - hypothetical protein BCE_1441 30 COG1748 LYS9, Saccharopine dehydrogenase and related proteins Amino acid transport and metabolism 42779824 Common - hypothetical protein BCE_0746 23 COG3616 COG3616, Predicted amino acid aldolase or racemase Amino acid transport and metabolism 42779124 Common ispE 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase BCE_0043 195 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 42784581 Pathogen - hypothetical protein BCE_5536 1 None None None 42784028 Common - dedA family protein BCE_4982 141 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 42780566 Common - flavodoxin BCE_1492 35 COG0716 FldA, Flavodoxins Energy production and conversion 42783553 Common - bypass-of-forespore protein C, putative BCE_4507 2 None None None 42781208 Common - mutT/nudix family protein BCE_2142 7 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42781519 Pathogen - hypothetical protein BCE_2457 1 None None None 42783374 Pathogen - hypothetical protein BCE_4328 1 None None None 42780535 Common - 7-cyano-7-deazaguanine reductase BCE_1461 145 COG0780 COG0780, Enzyme related to GTP cyclohydrolase I General function prediction only 42781500 Common - transcriptional regulator, putative, Mar family BCE_2438 15 COG1846 MarR, Transcriptional regulators Transcription 42782506 Common - hypothetical protein BCE_3453 5 COG1694 MazG, Predicted pyrophosphatase General function prediction only 42783913 Common narA molybdenum cofactor biosynthesis protein A BCE_4867 197 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 42783958 Pathogen - hypothetical protein BCE_4912 1 None None None 42782561 Common - major facilitator family transporter BCE_3510 85 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42779106 Common bofA sigma-k factor processing regulatory protein BofA BCE_0025 5 None None None 42783382 Common metC cystathionine gamma-synthase BCE_4336 207 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 42779312 Pathogen - hypothetical protein BCE_0231 1 None None None 42780365 Common - UDP-glucose 4-epimerase-like protein BCE_1291 1 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42781934 Common - NLP/P60 family protein BCE_2878 161 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 42781812 Pathogen - hypothetical protein BCE_2755 1 None None None 42782554 Common - transcriptional regulator, putative BCE_3503 39 COG0789 SoxR, Predicted transcriptional regulators Transcription 42783288 Common - hypothetical protein BCE_4242 2 None None None 42779242 Common - IS231-related transposase, truncation BCE_0161 1 None None None 42779621 Common - HhH-GPD superfamily base excision DNA repair protein BCE_0541 109 COG0122 AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase DNA replication, recombination, and repair 42783152 Common mtnB methylthioribulose-1-phosphate dehydratase BCE_4105 65 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 42780869 Pathogen - hypothetical protein BCE_1797 1 None None None 42779350 Common - rhomboid family protein BCE_0269 56 COG0705 GlpG, Uncharacterized membrane protein (homolog of Drosophila rhomboid) General function prediction only 42783838 Pathogen - hypothetical protein BCE_4792 1 None None None 42782372 Pathogen - hypothetical protein BCE_3319 1 None None None 42782573 Common - hypothetical protein BCE_3522 110 COG0397 COG0397, Uncharacterized conserved protein Function unknown 42783291 Common spoIVB stage IV sporulation protein B BCE_4245 21 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 42782575 Pathogen - hypothetical protein BCE_3524 1 None None None 42780492 Common - ykgG family protein BCE_1418 61 COG1556 COG1556, Uncharacterized conserved protein Function unknown 42781235 Common - hypothetical protein BCE_2169 47 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42781815 Common - permease, putative BCE_2758 11 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 42782260 Common - Unknown, putative BCE_3205 3 None None None 42781397 Common kamA L-lysine 2,3-aminomutase BCE_2334 127 COG1509 KamA, Lysine 2,3-aminomutase Amino acid transport and metabolism 42783067 Common pdhB pyruvate dehydrogenase complex E1 component, beta subunit BCE_4020 191 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 42783395 Common pstB phosphate ABC transporter, ATP-binding protein BCE_4349 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 42780543 Common nrdI ribonucleotide reductase stimulatory protein BCE_1469 39 COG1780 NrdI, Protein involved in ribonucleotide reduction Nucleotide transport and metabolism 42779536 Pathogen - hypothetical protein BCE_0455 1 None None None 42780931 Common - RNA polymerase sigma factor SigW BCE_1861 156 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42781575 Common - ABC transporter, ATP-binding protein BCE_2513 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42781553 Common - hypothetical protein BCE_2491 38 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 42781762 Common - hypothetical protein BCE_2704 5 None None None 42779735 Pathogen - hypothetical protein BCE_0657 1 None None None 42783344 Common - ABC transporter, ATP-binding protein BCE_4298 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42779384 Common - UDP-glucose 4-epimerase, putative BCE_0303 232 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42783132 Common - hypothetical protein BCE_4085 3 None None None 42783149 Common - transaminase BCE_4102 239 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 42784319 Pathogen - hypothetical protein BCE_5273 1 None None None 42779496 Common - N-acetylmuramoyl-L-alanine amidase domain protein BCE_0415 6 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 42784096 Common - arsenical pump family protein BCE_5050 134 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 42782611 Common - short chain dehydrogenase BCE_3561 233 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42779466 Common - phage protein, putative BCE_0385 13 None None None 42780248 Common - proline iminopeptidase, putative BCE_1173 175 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42782461 Common gntP gluconate permease BCE_3408 77 COG2610 GntT, H+/gluconate symporter and related permeases Carbohydrate transport and metabolism / Amino acid transport and metabolism 42782725 Common - NADH-dependent flavin oxidoreductase, Oye family BCE_3675 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 42779481 Common - phage major capsid protein, HK97 family BCE_0400 62 COG4653 COG4653, Predicted phage phi-C31 gp36 major capsid-like protein General function prediction only 42780758 Common - hypothetical protein BCE_1684 4 None None None 42784089 Common - hydrolase, alpha/beta fold family BCE_5043 173 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42781203 Pathogen - hypothetical protein BCE_2137 1 None None None 42779086 Common gyrB DNA gyrase subunit B BCE_0005 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 42784238 Pathogen - hypothetical protein BCE_5192 1 None None None 42782207 Common - BclA protein BCE_3152 1 None None None 42783038 Common ctaD cytochrome c oxidase, subunit I BCE_3990 164 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 42783924 Pathogen - hypothetical protein BCE_4878 1 None None None 42783311 Common spoIIIAB stage III sporulation protein SpoAB BCE_4265 14 None None None 42782491 Common - hypothetical protein BCE_3438 150 COG1733 COG1733, Predicted transcriptional regulators Transcription 42783386 Common - hypothetical protein BCE_4340 87 COG1565 COG1565, Uncharacterized conserved protein Function unknown 42783008 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase BCE_3960 215 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 42784379 Common - hypothetical protein BCE_5334 61 COG1511 COG1511, Predicted membrane protein Function unknown 42780030 Common - lipoprotein, putative BCE_0954 2 None None None 42781704 Pathogen - hypothetical protein BCE_2645 1 None None None 42779187 Common rpsG 30S ribosomal protein S7 BCE_0106 249 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 42779491 Common - hypothetical protein BCE_0410 4 None None None 42781735 Common - two-component sensor histidine kinase BCE_2676 217 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779357 Common - hypothetical protein BCE_0276 1 None None None 42781698 Common - acetyltransferase, GNAT family family BCE_2639 20 COG3153 COG3153, Predicted acetyltransferase General function prediction only 42783349 Common yqhK glycine dehydrogenase subunit 2 BCE_4303 172 COG1003 GcvP, Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain Amino acid transport and metabolism 42781766 Common - transcriptional regulator, GntR family BCE_2708 234 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42779566 Common thiM hydroxyethylthiazole kinase BCE_0486 79 COG2145 ThiM, Hydroxyethylthiazole kinase, sugar kinase family Coenzyme metabolism 42781862 Common - hypothetical protein BCE_2805 4 None None None 42780312 Common - competence protein A, putative BCE_1238 186 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42781429 Pathogen - hypothetical protein BCE_2366 1 None None None 42781982 Common - hypothetical protein BCE_2926 4 COG2261 COG2261, Predicted membrane protein Function unknown 42781631 Pathogen - hypothetical protein BCE_2570 1 None None None 42783526 Common - aminotransferase, class V BCE_4480 239 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 42780831 Common flgK flagellar hook-associated protein FlgK BCE_1758 119 COG1256 FlgK, Flagellar hook-associated protein Cell motility and secretion 42784493 Pathogen - hypothetical protein BCE_5448 1 None None None 42783584 Common spoIVFB stage IV sporulation protein FB BCE_4538 80 COG1994 SpoIVFB, Zn-dependent proteases General function prediction only 42781963 Common cotX spore coat protein X (insoluble fraction) BCE_2907 2 None None None 42784272 Common - iron compound ABC transporter, iron compound-binding protein BCE_5226 45 COG4607 CeuA, ABC-type enterochelin transport system, periplasmic component Inorganic ion transport and metabolism 42780275 Pathogen - hypothetical protein BCE_1200 1 None None None 42782772 Common - phosphonate ABC transporter, ATP-binding protein BCE_3722 249 COG3638 COG3638, ABC-type phosphate/phosphonate transport system, ATPase component Inorganic ion transport and metabolism 42784504 Pathogen - hypothetical protein BCE_5459 1 None None None 42781313 Common - hypothetical protein BCE_2249 12 None None None 42783082 Pathogen - hypothetical protein BCE_4035 1 None None None 42782132 Common - transcriptional regulator, MarR family BCE_3076 86 COG1846 MarR, Transcriptional regulators Transcription 42779143 Common hpt hypoxanthine-guanine phosphoribosyltransferase BCE_0062 153 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 42779805 Common - oligopeptide ABC transporter, ATP-binding protein BCE_0727 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 42781726 Common - hypothetical protein BCE_2667 13 COG4720 COG4720, Predicted membrane protein Function unknown 42782467 Pathogen - hypothetical protein BCE_3414 1 None None None 42784367 Common - RNA polymerase factor sigma-70 BCE_5322 28 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42782435 Common - acetyltransferase, GNAT family BCE_3382 13 COG0456 RimI, Acetyltransferases General function prediction only 42781945 Pathogen - hypothetical protein BCE_2889 1 None None None 42784385 Common - arsenical pump family protein, putative BCE_5340 68 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 42784641 Common - oligoendopeptidase F, putative BCE_5596 85 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42781871 Pathogen - hypothetical protein BCE_2814 1 None None None 42781142 Common - permease, putative domain protein BCE_2076 17 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 42779206 Common rplF 50S ribosomal protein L6 BCE_0125 244 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 42782609 Common - acetyltransferase, CYSE/LACA/LPXA/NODL family BCE_3559 183 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 42783361 Pathogen - hypothetical protein BCE_4315 1 None None None 42783546 Common - hypothetical protein BCE_4500 6 None None None 42779197 Common rpsC 30S ribosomal protein S3 BCE_0116 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 42781001 Common - short chain dehydrogenase BCE_1932 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42779550 Common - methyl-accepting chemotaxis protein, putative BCE_0470 151 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42780973 Common - tagatose-6-phosphate ketose/aldose isomerase, putative BCE_1904 64 COG2222 AgaS, Predicted phosphosugar isomerases Cell envelope biogenesis, outer membrane 42779084 Common - hypothetical protein BCE_0003 36 COG2501 COG2501, Uncharacterized conserved protein Function unknown 42780445 Pathogen - hypothetical protein BCE_1371 1 None None None 42781685 Common - homoserine dehydrogenase BCE_2626 216 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 42782806 Common hup DNA-binding protein HU BCE_3756 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 42781919 Common - hypothetical protein BCE_2862 38 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 42783998 Common - S-layer protein, putative BCE_4952 23 None None None 42779728 Common - DNA-binding response regulator BCE_0650 223 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42784619 Common - sensor histidine kinase LytS BCE_5574 108 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 42780779 Common - rhodanese-like domain protein BCE_1705 145 COG2897 SseA, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 42781587 Pathogen - hypothetical protein BCE_2525 1 None None None 42779266 Common - Tn7-like transposition protein D BCE_0185 19 None None None 42784583 Common - DNA-binding transcriptional activator of stationary phase nitrogen survival BCE_5538 20 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 42783399 Common - penicillin-binding protein BCE_4353 203 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42779782 Common - spore germination protein GerKA BCE_0704 15 None None None 42780629 Common - proton/glutamate symporter family protein BCE_1555 165 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 42783335 Common sugE sugE protein BCE_4289 146 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 42783762 Common - hypothetical protein BCE_4716 16 COG1971 COG1971, Predicted membrane protein Function unknown 42779126 Common - endoribonuclease L-PSP, putative BCE_0045 189 COG0251 TdcF, Putative translation initiation inhibitor, yjgF family Translation, ribosomal structure and biogenesis 42782425 Common - glyoxylase family protein BCE_3372 19 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42783561 Common nadB L-aspartate oxidase BCE_4515 226 COG0029 NadB, Aspartate oxidase Coenzyme metabolism 42784348 Pathogen - hypothetical protein BCE_5303 1 None None None 42783822 Common - hypothetical protein BCE_4776 17 COG3874 COG3874, Uncharacterized conserved protein Function unknown 42782223 Pathogen - hypothetical protein BCE_3168 1 None None None 42780415 Common cotZ spore coat protein Z BCE_1341 2 None None None 42782811 Common - hypothetical protein BCE_3761 100 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 42782923 Common xerC site-specific tyrosine recombinase XerC BCE_3873 231 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42783059 Pathogen - hypothetical protein BCE_4012 1 None None None 42781064 Common - glyoxalase family protein BCE_1995 93 COG3185 COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins Amino acid transport and metabolism / General function prediction only 42782603 Common cspB cold shock protein CspB BCE_3553 183 COG1278 CspC, Cold shock proteins Transcription 42779845 Pathogen - hypothetical protein BCE_0767 1 None None None 42780151 Common - S-layer homology domain protein BCE_1075 24 None None None 42782692 Pathogen - hypothetical protein BCE_3642 1 None None None 42779473 Common - DNA methylase, family protein BCE_0392 90 COG0863 COG0863, DNA modification methylase DNA replication, recombination, and repair 42780063 Common - Tn554-related, transposase B BCE_0987 105 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42779817 Pathogen - hypothetical protein BCE_0739 1 None None None 42779393 Pathogen - hypothetical protein BCE_0312 1 None None None 42782697 Common - acyl-CoA synthetase BCE_3647 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42783669 Common - hypothetical protein BCE_4623 9 COG2856 COG2856, Predicted Zn peptidase Amino acid transport and metabolism 42781292 Common - hypothetical protein BCE_2227 2 None None None 42779227 Common cwlD germination-specific N-acetylmuramoyl-L-alanine amidase BCE_0146 135 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42779277 Common - ABC transporter, ATP-binding protein BCE_0196 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 42780439 Common - L-lactate permease, putative BCE_1365 105 COG1620 LldP, L-lactate permease Energy production and conversion 42780709 Common - hypothetical protein BCE_1635 3 None None None 42779410 Common - hypothetical protein BCE_0329 14 COG4877 COG4877, Uncharacterized protein conserved in bacteria Function unknown 42784526 Common - transcriptional regulator PlcR, putative BCE_5481 10 None None None 42780479 Common - ribosomal large subunit pseudouridine synthase, RluD subfamily BCE_1405 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 42783758 Common speD S-adenosylmethionine decarboxylase proenzyme BCE_4712 74 COG1586 SpeD, S-adenosylmethionine decarboxylase Amino acid transport and metabolism 42782547 Common qor quinone oxidoreductase BCE_3496 186 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42782598 Common - VanW-related protein BCE_3548 38 COG2720 COG2720, Uncharacterized vancomycin resistance protein Defense mechanisms 42781299 Common - hypothetical protein BCE_2234 20 None None None 42781855 Common - transcriptional regulator, DeoR family BCE_2798 116 COG1349 GlpR, Transcriptional regulators of sugar metabolism Transcription / Carbohydrate transport and metabolism 42782007 Pathogen - hypothetical protein BCE_2951 1 None None None 42782357 Common - hypothetical protein BCE_3304 3 None None None 42782160 Common lysP lysine-specific permease BCE_3104 161 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 42782626 Pathogen - hypothetical protein BCE_3576 1 None None None 42779993 Common - hypothetical protein BCE_0917 11 COG3631 COG3631, Ketosteroid isomerase-related protein General function prediction only 42780607 Common - histidinol-phosphatase BCE_1533 31 COG1387 HIS2, Histidinol phosphatase and related hydrolases of the PHP family Amino acid transport and metabolism / General function prediction only 42782276 Common - radical SAM domain protein BCE_3221 90 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 42784051 Pathogen - hypothetical protein BCE_5005 1 None None None 42784603 Common - hypothetical protein BCE_5558 3 COG2456 COG2456, Uncharacterized conserved protein Function unknown 42780693 Pathogen - hypothetical protein BCE_1619 1 None None None 42781380 Pathogen - lemA domain protein BCE_2316 1 None None None 42782231 Pathogen - hypothetical protein BCE_3176 1 None None None 42779230 Common kbaA kinb signaling pathway activation protein BCE_0149 3 None None None 42782401 Common hisS histidyl-tRNA synthetase BCE_3348 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42783745 Common - drug resistance transporter, EmrB/QacA family BCE_4699 211 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783100 Common metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase BCE_4053 140 COG0620 MetE, Methionine synthase II (cobalamin-independent) Amino acid transport and metabolism 42783140 Common - hypothetical protein BCE_4093 22 COG4392 COG4392, Predicted membrane protein Function unknown 42784269 Common - iron compound ABC transporter, ATP-binding protein BCE_5223 249 COG4604 CeuD, ABC-type enterochelin transport system, ATPase component Inorganic ion transport and metabolism 42784247 Common - sodium/alanine symporter family protein BCE_5201 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 42783798 Common - acetyltransferase, GNAT family BCE_4752 15 COG0456 RimI, Acetyltransferases General function prediction only 42779775 Common - amino acid permease family protein BCE_0697 175 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42782641 Common gerSB spore germination protein BCE_3591 13 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 42779340 Pathogen - hypothetical protein BCE_0259 1 None None None 42783298 Common xseB exodeoxyribonuclease VII, small subunit BCE_4252 127 COG1722 XseB, Exonuclease VII small subunit DNA replication, recombination, and repair 42782777 Common lexA LexA repressor BCE_3727 174 COG1974 LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) Transcription / Signal transduction mechanisms 42782933 Common trmD tRNA (guanine-N(1)-)-methyltransferase BCE_3883 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 42781835 Pathogen - lipoprotein, putative BCE_2778 1 None None None 42779978 Common - dedA family protein BCE_0902 90 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 42781525 Common - multidrug resistance protein, putative BCE_2463 214 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783834 Common - transporter, EamA family BCE_4788 80 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42780169 Pathogen - hypothetical protein BCE_1093 1 None None None 42783831 Common - aminotransferase, class V BCE_4785 240 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 42779090 Common guaB inositol-5-monophosphate dehydrogenase BCE_0009 238 COG0516 GuaB, IMP dehydrogenase/GMP reductase Nucleotide transport and metabolism 42782083 Common - nucleoside transporter, NupC family BCE_3027 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42780797 Pathogen - hypothetical protein BCE_1723 1 None None None 42779872 Common - transcriptional activator TenA, putative BCE_0795 76 COG0819 TenA, Putative transcription activator Transcription 42783475 Common - acetyltransferase, GNAT family BCE_4429 18 COG2153 ElaA, Predicted acyltransferase General function prediction only 42782909 Common - DNA polymerase III, alpha subunit, Gram-positive type BCE_3859 218 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 42779969 Common - peptide ABC transporter, permease protein BCE_0893 104 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42780088 Common - hypothetical protein BCE_1012 2 None None None 42783281 Common bfmbC dihydrolipoamide dehydrogenase BCE_4235 240 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 42783484 Pathogen - hypothetical protein BCE_4438 1 None None None 42784358 Common - transcription antiterminator, BglG family BCE_5313 162 COG1221 PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain Transcription / Signal transduction mechanisms 42782473 Pathogen - hypothetical protein BCE_3420 1 None None None 42781107 Common - hydrolase, alpha/beta fold family BCE_2038 60 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783576 Common vicK sensor histidine kinase BCE_4530 206 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42783896 Common - conserved hypothetical protein TIGR00275 BCE_4850 159 COG2081 COG2081, Predicted flavoproteins General function prediction only 42780241 Common pbpF penicillin-binding protein 1 BCE_1166 201 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 42781724 Common - aspartate racemase family protein BCE_2665 85 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 42781337 Common - TatCD protein BCE_2273 204 COG0805 TatC, Sec-independent protein secretion pathway component TatC Intracellular trafficking and secretion 42782339 Common - hypothetical protein BCE_3286 11 COG2155 COG2155, Uncharacterized conserved protein Function unknown 42780823 Common - flagellar motor switch protein BCE_1750 48 COG1776 CheC, Chemotaxis protein CheC, inhibitor of MCP methylation Cell motility and secretion / Signal transduction mechanisms 42781774 Pathogen - hypothetical protein BCE_2717 1 None None None 42780003 Common - transcriptional regulator, TetR family BCE_0927 89 COG1309 AcrR, Transcriptional regulator Transcription 42782451 Common - NAD dependent epimerase/dehydratase family superfamily BCE_3398 229 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42784614 Common msrA bifunctional methionine sulfoxide reductase A/B protein BCE_5569 206 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 42779160 Common - hypothetical protein BCE_0079 20 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 42781435 Common - major facilitator family transporter BCE_2372 207 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42781876 Common clpP ATP-dependent Clp protease, proteolytic subunit ClpP BCE_2819 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 42781088 Common - transcriptional regulator, MarR family BCE_2019 76 COG1846 MarR, Transcriptional regulators Transcription 42784321 Common - transcriptional regulator, MerR family BCE_5275 123 COG0789 SoxR, Predicted transcriptional regulators Transcription 42781043 Common - deoxyribonucleoside regulator DeoR, putative BCE_1974 68 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 42783611 Common - hypothetical protein BCE_4565 3 None None None 42783444 Common hemN coproporphyrinogen III oxidase BCE_4398 210 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 42780109 Pathogen - hypothetical protein BCE_1033 1 None None None 42781178 Common - short chain dehydrogenase BCE_2112 5 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42783111 Common - maltosaccharide ABC transporter, maltosaccharide-binding protein, putative BCE_4064 99 COG2182 MalE, Maltose-binding periplasmic proteins/domains Carbohydrate transport and metabolism 42783974 Pathogen - hypothetical protein BCE_4928 1 None None None 42782178 Common sipU Signal peptidase I U BCE_3123 193 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 42783853 Common - oxidoreductase, Gfo/Idh/MocA family BCE_4807 152 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 42781389 Common - hypothetical protein BCE_2326 13 None None None 42783848 Common acuA acetoin utilization protein AcuA BCE_4802 8 None None None 42782656 Pathogen - hypothetical protein BCE_3606 1 None None None 42783784 Common - DHH subfamily 1 protein BCE_4738 80 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 42784000 Common - hypothetical protein BCE_4954 45 COG1434 COG1434, Uncharacterized conserved protein Function unknown 42779789 Common - amino acid ABC transporter, permease protein BCE_0711 169 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 42780357 Common - hypothetical protein BCE_1283 2 None None None 42784052 Pathogen - hypothetical protein BCE_5006 1 None None None 42783122 Common - hypothetical protein BCE_4075 30 COG3910 COG3910, Predicted ATPase General function prediction only 42780219 Common - stage V sporulation protein K BCE_1144 220 COG0464 SpoVK, ATPases of the AAA+ class Posttranslational modification, protein turnover, chaperones 42784404 Pathogen - hypothetical protein BCE_5359 1 None None None 42782848 Common - hypothetical protein BCE_3798 8 COG1159 Era, GTPase General function prediction only 42781255 Common - ATP-dependent RNA helicase, DEAD/DEAH box family BCE_2189 241 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 42781360 Common - alcohol dehydrogenase BCE_2296 215 COG1064 AdhP, Zn-dependent alcohol dehydrogenases General function prediction only 42782526 Common - drug resistance transporter, Bcr/CflA subfamily, inetrruption-C BCE_3475 124 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42784637 Common - ATP-dependent RNA helicase, DEAD/DEAH box family BCE_5592 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 42783886 Common - metallo-beta-lactamase family protein BCE_4840 87 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42783392 Common rpmG 50S ribosomal protein L33 BCE_4346 79 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 42783243 Pathogen - hypothetical protein BCE_4197 1 None None None 42780082 Pathogen - hypothetical protein BCE_1006 1 None None None 42780917 Common - hypothetical protein BCE_1847 20 COG3340 PepE, Peptidase E Amino acid transport and metabolism 42783852 Pathogen - hypothetical protein BCE_4806 1 None None None 42782201 Pathogen - hypothetical protein BCE_3146 2 None None None 42782602 Common - exonuclease BCE_3552 54 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 42780550 Common - ABC transporter, permease protein, putative BCE_1476 10 COG4200 COG4200, Uncharacterized protein conserved in bacteria Function unknown 42780626 Common - sodium-dependent transporter, putative BCE_1552 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 42780603 Common hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase BCE_1529 214 COG0106 HisA, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase Amino acid transport and metabolism 42783403 Common - hypothetical protein BCE_4357 2 None None None 42783331 Common - rhodanese-like domain protein BCE_4285 168 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 42779668 Common - ABC transporter, permease protein, putative BCE_0588 29 COG4587 COG4587, ABC-type uncharacterized transport system, permease component General function prediction only 42783742 Pathogen - hypothetical protein BCE_4696 1 None None None 42780602 Common hisH imidazole glycerol phosphate synthase subunit HisH BCE_1528 215 COG0118 HisH, Glutamine amidotransferase Amino acid transport and metabolism 42782056 Common - hypothetical protein BCE_3000 3 None None None 42784151 Common - hypothetical protein BCE_5105 10 COG4377 COG4377, Predicted membrane protein Function unknown 42783625 Common - hypothetical protein BCE_4579 2 None None None 42784158 Common - hypothetical protein BCE_5112 9 COG3377 COG3377, Uncharacterized conserved protein Function unknown 42782540 Common - hypothetical protein BCE_3489 3 None None None 42781100 Common - hypothetical protein BCE_2031 3 COG2510 COG2510, Predicted membrane protein Function unknown 42783114 Common - sugar ABC transporter, ATP-binding protein BCE_4067 249 COG3839 MalK, ABC-type sugar transport systems, ATPase components Carbohydrate transport and metabolism 42783883 Common - NTPase BCE_4837 36 COG1986 COG1986, Uncharacterized conserved protein Function unknown 42779851 Common - amino acid permease domain protein BCE_0773 175 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 42779335 Pathogen - hypothetical protein BCE_0254 1 None None None 42780371 Common trpS tryptophanyl-tRNA synthetase BCE_1297 232 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42782497 Common - transcriptional regulator, DeoR family BCE_3444 17 COG2378 COG2378, Predicted transcriptional regulator Transcription 42783410 Common - endonuclease IV BCE_4364 100 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 42784105 Common - hypothetical protein BCE_5059 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 42779218 Common rpoA DNA-directed RNA polymerase subunit alpha BCE_0137 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 42782303 Common gutB sorbitol dehydrogenase BCE_3248 213 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 42784341 Common yfiA ribosomal subunit interface protein BCE_5296 168 COG1544 COG1544, Ribosome-associated protein Y (PSrp-1) Translation, ribosomal structure and biogenesis 42779926 Common - DNA recombinase, putative BCE_0850 69 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42780176 Pathogen - hypothetical protein BCE_1100 1 None None None 42780575 Common - multidrug efflux protein BCE_1501 183 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 42782247 Pathogen - hypothetical protein BCE_3192 1 None None None 42784142 Common - phosphatase,haloacid dehalogenase family BCE_5096 102 COG0647 NagD, Predicted sugar phosphatases of the HAD superfamily Carbohydrate transport and metabolism 42779169 Common cysE serine O-acetyltransferase BCE_0088 214 COG1045 CysE, Serine acetyltransferase Amino acid transport and metabolism 42779964 Common - ABC transporter, permease protein, putative BCE_0888 186 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42783326 Common - hypothetical protein BCE_4280 5 COG4817 COG4817, Uncharacterized protein conserved in bacteria Function unknown 42780879 Common - permease, putative BCE_1808 138 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 42783751 Common rpmI 50S ribosomal protein L35 BCE_4705 161 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 42782555 Common - hypothetical protein BCE_3504 17 COG2957 COG2957, Peptidylarginine deiminase and related enzymes Amino acid transport and metabolism 42783268 Common - hypothetical protein BCE_4222 9 COG4129 COG4129, Predicted membrane protein Function unknown 42784230 Common - hypothetical protein BCE_5184 145 COG1741 COG1741, Pirin-related protein General function prediction only 42779470 Common - HNH endonuclease domain protein BCE_0389 34 COG1403 McrA, Restriction endonuclease Defense mechanisms 42780072 Common - hypothetical protein BCE_0996 3 None None None 42783273 Common - hypothetical protein BCE_4227 11 None None None 42781780 Common - hydrolase, alpha/beta fold family BCE_2723 8 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42782267 Common - hypothetical protein BCE_3212 6 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 42781781 Common - hypothetical protein BCE_2724 96 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 42784224 Common - hypothetical protein BCE_5178 36 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 42781825 Common - transporter, EamA family BCE_2768 133 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42783804 Common ald alanine dehydrogenase BCE_4758 169 COG0686 Ald, Alanine dehydrogenase Amino acid transport and metabolism 42780856 Common fliM flagellar motor switch protein FliM BCE_1783 71 COG1868 FliM, Flagellar motor switch protein Cell motility and secretion 42783194 Common - hypothetical protein BCE_4148 3 None None None 42779700 Common - DNA-binding response regulator BCE_0621 184 COG4565 CitB, Response regulator of citrate/malate metabolism Transcription / Signal transduction mechanisms 42780502 Common - phaR protein BCE_1428 6 None None None 42781327 Common - hypothetical protein BCE_2263 12 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42781607 Pathogen - hypothetical protein BCE_2546 1 None None None 42779942 Common - rhodanese domain protein BCE_0866 159 COG0607 PspE, Rhodanese-related sulfurtransferase Inorganic ion transport and metabolism 42784566 Common - hypothetical protein BCE_5521 72 COG2363 COG2363, Uncharacterized small membrane protein Function unknown 42780223 Common - hypothetical protein BCE_1148 2 None None None 42781989 Pathogen - hypothetical protein BCE_2933 1 None None None 42783169 Common nagA N-acetylglucosamine-6-phosphate deacetylase BCE_4122 118 COG1820 NagA, N-acetylglucosamine-6-phosphate deacetylase Carbohydrate transport and metabolism 42779211 Common secY preprotein translocase subunit SecY BCE_0130 233 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 42783427 Common cdd cytidine deaminase BCE_4381 117 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 42783211 Common lolS lolS protein BCE_4165 206 COG0667 Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Energy production and conversion 42781346 Pathogen - hypothetical protein BCE_2282 1 None None None 42780184 Common - hypothetical protein BCE_1108 3 None None None 42782433 Common - hypothetical protein BCE_3380 152 COG0628 PerM, Predicted permease General function prediction only 42780016 Common gapN glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent BCE_0940 225 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42779904 Pathogen - hypothetical protein BCE_0828 1 None None None 42779413 Pathogen - hypothetical protein BCE_0332 1 None None None 42783703 Common - hypothetical protein BCE_4657 7 COG3595 COG3595, Uncharacterized conserved protein Function unknown 42781221 Common - 2-hydroxypenta-2,4-dienoate hydratase, putative BCE_2155 62 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 42782519 Common - hypothetical protein BCE_3468 19 COG4709 COG4709, Predicted membrane protein Function unknown 42783433 Pathogen - hypothetical protein BCE_4387 1 None None None 42784067 Common - transcriptional regulator, MerR family BCE_5021 111 COG0789 SoxR, Predicted transcriptional regulators Transcription 42784201 Pathogen - hypothetical protein BCE_5155 1 None None None 42779255 Common - Tn7-like transposition protein A BCE_0174 18 None None None 42780984 Pathogen - cbiN domain protein BCE_1915 1 None None None 42780752 Common - penicillin-binding protein BCE_1678 200 COG0744 MrcB, Membrane carboxypeptidase (penicillin-binding protein) Cell envelope biogenesis, outer membrane 42781351 Common - lipoprotein, putative BCE_2287 2 None None None 42782818 Common - iron compound ABC transporter, ATP-binding protein BCE_3768 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 42782937 Common ffH signal recognition particle protein BCE_3887 246 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 42784124 Common - ABC transporter, ATP-binding protein BCE_5078 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42781801 Common - N-acetyltransferase family protein BCE_2744 41 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 42781128 Common - sensor histidine kinase BCE_2060 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779891 Common - transcriptional regulator, MarR family BCE_0814 25 COG1846 MarR, Transcriptional regulators Transcription 42781746 Common - thiJ/pfpI family protein BCE_2688 18 COG4977 COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Transcription 42781751 Pathogen - hypothetical protein BCE_2693 1 None None None 42782851 Common - choloylglycine hydrolase family protein BCE_3801 53 COG3049 COG3049, Penicillin V acylase and related amidases Cell envelope biogenesis, outer membrane 42781273 Common xylR xylose repressor BCE_2208 162 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 42783180 Common - HAD-superfamily hydrolase, subfamily IIB BCE_4133 108 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42783653 Common - DNA recombinase, putative BCE_4607 63 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42779561 Common - glycosyl hydrolase family protein BCE_0481 165 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 42780740 Common birA birA bifunctional protein BCE_1666 229 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 42784329 Common - macrolide efflux pump, putative BCE_5283 199 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42779113 Common - hypothetical protein BCE_0032 84 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 42780158 Common - hypothetical protein BCE_1082 24 COG2261 COG2261, Predicted membrane protein Function unknown 42781516 Common cspA cold shock protein CspA BCE_2454 182 COG1278 CspC, Cold shock proteins Transcription 42783949 Common - hypothetical protein BCE_4903 7 None None None 42782539 Common - hypothetical protein BCE_3488 24 COG3739 COG3739, Uncharacterized integral membrane protein Function unknown 42783029 Common - phosphoglycerate mutase family protein BCE_3981 133 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42783867 Pathogen - lipoprotein, putative BCE_4821 1 None None None 42780431 Common pabA anthranilate synthase component II BCE_1357 240 COG0512 PabA, Anthranilate/para-aminobenzoate synthases component II Amino acid transport and metabolism / Coenzyme metabolism 42783488 Common - hypothetical protein BCE_4442 14 COG2259 COG2259, Predicted membrane protein Function unknown 42780746 Common - hypothetical protein BCE_1672 3 None None None 42782684 Common - ABC transporter, ATP-binding/permease protein BCE_3634 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42782077 Common - hypothetical protein BCE_3021 2 None None None 42779800 Common - universal stress protein family BCE_0722 94 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 42783258 Common - magnesium-translocating P-type ATPase BCE_4212 232 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 42782475 Pathogen - hypothetical protein BCE_3422 1 None None None 42784422 Common - hypothetical protein BCE_5377 2 None None None 42780448 Pathogen - hypothetical protein BCE_1374 1 None None None 42782320 Common - LPXTG-motif cell wall anchor domain protein BCE_3266 176 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 42780899 Common - RNA polymerase factor sigma-70 BCE_1829 13 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42783089 Pathogen - hypothetical protein BCE_4042 1 None None None 42783868 Pathogen - hypothetical protein BCE_4822 1 None None None 42784471 Common - sensory box/GGDEF family protein BCE_5426 186 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 42782532 Pathogen - hypothetical protein BCE_3481 1 None None None 42782385 Pathogen - hypothetical protein BCE_3332 1 None None None 42780015 Common racE glutamate racemase BCE_0939 175 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 42781469 Pathogen - hypothetical protein BCE_2406 1 None None None 42780071 Common - ornithine cyclodeaminase BCE_0995 100 COG2423 COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog Amino acid transport and metabolism 42781127 Common - DNA-binding response regulator BCE_2059 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42781371 Common - hypothetical protein BCE_2307 8 None None None 42781896 Common - uvrD/Rep helicase family protein BCE_2839 165 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 42784009 Pathogen - hypothetical protein BCE_4963 1 None None None 42783683 Pathogen - hypothetical protein BCE_4637 1 None None None 42781767 Common - transporter, EamA family BCE_2709 77 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42784255 Common - hypothetical protein BCE_5209 2 COG2427 COG2427, Uncharacterized conserved protein Function unknown 42779694 Pathogen - hypothetical protein BCE_0615 1 None None None 42784291 Common sigL RNA polymerase factor sigma-54 BCE_5245 145 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 42781988 Pathogen - hypothetical protein BCE_2932 1 None None None 42782346 Common - hypothetical protein BCE_3293 12 None None None 42782279 Common - hypothetical protein BCE_3224 2 None None None 42780819 Common - flagellar motor protein MotP BCE_1746 82 COG1291 MotA, Flagellar motor component Cell motility and secretion 42779638 Common - hypothetical protein BCE_0558 1 None None None 42781319 Common - acetyltransferase, GNAT family BCE_2255 38 COG0456 RimI, Acetyltransferases General function prediction only 42783567 Common - glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent BCE_4521 226 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42784333 Pathogen - hypothetical protein BCE_5287 1 None None None 42780420 Common - ATP-dependent DNA helicase, UvrD/REP family BCE_1346 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 42780814 Common - glyoxalase family protein BCE_1741 5 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 42782226 Pathogen - hypothetical protein BCE_3171 1 None None None 42780945 Pathogen - hypothetical protein BCE_1876 1 None None None 42781112 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_2044 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42783154 Pathogen - hypothetical protein BCE_4107 1 None None None 42783661 Pathogen - hypothetical protein BCE_4615 1 None None None 42779181 Common rplL 50S ribosomal protein L7/L12 BCE_0100 211 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 42780157 Common - hypothetical protein BCE_1081 18 None None None 42782505 Common bla2 beta-lactamase II BCE_3452 39 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42780073 Common - hypothetical protein BCE_0997 6 None None None 42782095 Common - hypothetical protein BCE_3039 9 None None None 42780246 Common - endonuclease/exonuclease/phosphatase family BCE_1171 50 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 42780062 Common - Tn554-related, transposase A BCE_0986 131 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42783045 Common - hypothetical protein BCE_3997 4 COG2041 COG2041, Sulfite oxidase and related enzymes General function prediction only 42779125 Common purR purine operon repressor BCE_0044 94 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 42782140 Common - ABC transporter, permease protein BCE_3084 2 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42783044 Common - hypothetical protein BCE_3996 7 COG4838 COG4838, Uncharacterized protein conserved in bacteria Function unknown 42784156 Common - peptidase, M23/M37 family BCE_5110 115 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 42780591 Common ilvB acetolactate synthase catalytic subunit BCE_1517 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 42780925 Common dsdA D-serine dehydratase BCE_1855 43 COG3048 DsdA, D-serine dehydratase Amino acid transport and metabolism 42780649 Common - hypothetical protein BCE_1575 18 COG0730 COG0730, Predicted permeases General function prediction only 42782670 Common - DNA-binding response regulator BCE_3620 226 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782741 Common - reverse transcriptase/endonuclease BCE_3691 90 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 42782791 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase BCE_3741 214 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 42782341 Common - CAAX amino terminal protease family family BCE_3288 24 None None None 42784061 Common menD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase BCE_5015 109 COG1165 MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Coenzyme metabolism 42779764 Common - iron compound ABC transporter, ATP-binding protein BCE_0686 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 42781542 Common - transporter, LysE family BCE_2480 90 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 42783606 Common - GTPase EngB BCE_4560 198 COG0218 COG0218, Predicted GTPase General function prediction only 42784174 Common - Toprim domain protein BCE_5128 6 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 42782004 Pathogen - hypothetical protein BCE_2948 1 None None None 42781470 Common hup DNA-binding protein HU BCE_2407 213 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 42781750 Pathogen - hypothetical protein BCE_2692 1 None None None 42782902 Common - hypothetical protein BCE_3852 23 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 42781134 Common - lysE/yggA family protein BCE_2067 83 COG1279 COG1279, Lysine efflux permease General function prediction only 42780904 Common - transcriptional regulator, GntR family BCE_1834 132 COG1802 GntR, Transcriptional regulators Transcription 42781180 Pathogen - hypothetical protein BCE_2114 1 None None None 42783366 Common comGB comG operon protein 2 BCE_4320 74 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 42784362 Common - hypothetical protein BCE_5317 53 COG3394 COG3394, Uncharacterized protein conserved in bacteria Function unknown 42781041 Pathogen - hypothetical protein BCE_1972 1 None None None 42783066 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 BCE_4019 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 42780203 Common - IS3-family transposase, OrfA BCE_1127 22 COG2963 COG2963, Transposase and inactivated derivatives DNA replication, recombination, and repair 42782821 Common - iron compound ABC transporter, iron compound-binding protein BCE_3771 79 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42779425 Pathogen - hypothetical protein BCE_0344 1 None None None 42781381 Common - hypothetical protein BCE_2317 37 COG0714 COG0714, MoxR-like ATPases General function prediction only 42784120 Common dapF diaminopimelate epimerase BCE_5074 201 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 42783574 Common - ABC transporter, ATP-binding protein BCE_4528 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42781482 Common - ABC transporter, ATP-binding protein BCE_2420 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42784655 Common - serine protease BCE_5610 222 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 42781590 Common dacA D-alanyl-D-alanine carboxypeptidase BCE_2529 155 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42783500 Common metC cystathionine beta-lyase BCE_4454 206 COG0626 MetC, Cystathionine beta-lyases/cystathionine gamma-synthases Amino acid transport and metabolism 42783666 Pathogen - hypothetical protein BCE_4620 1 None None None 42781639 Common - hypothetical protein BCE_2578 1 None None None 42779579 Common - hypothetical protein BCE_0499 12 None None None 42781408 Pathogen - hypothetical protein BCE_2345 1 None None None 42781197 Common - CBS domain protein BCE_2131 8 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 42782675 Common - hypothetical protein BCE_3625 7 COG4841 COG4841, Uncharacterized protein conserved in bacteria Function unknown 42783050 Common - hypothetical protein BCE_4002 3 None None None 42779526 Pathogen - hypothetical protein BCE_0445 1 None None None 42780348 Common - hypothetical protein BCE_1274 44 COG2996 COG2996, Uncharacterized protein conserved in bacteria Function unknown 42783015 Common - acetyltransferase, GNAT family BCE_3967 3 None None None 42783690 Common sdhA succinate dehydrogenase flavoprotein subunit BCE_4644 226 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 42780112 Pathogen - hypothetical protein BCE_1036 1 None None None 42780047 Common - polysaccharide biosynthesis protein CsaA BCE_0971 49 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42784648 Common - transcriptional regulator-related protein BCE_5603 5 None None None 42782736 Pathogen - hypothetical protein BCE_3686 1 None None None 42781074 Common - amidase BCE_2005 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 42780459 Pathogen - hypothetical protein BCE_1385 1 None None None 42781117 Common - mutT/nudix family protein BCE_2049 4 COG1443 Idi, Isopentenyldiphosphate isomerase Lipid metabolism 42780526 Common - oligoendopeptidase F, putative BCE_1452 55 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42782631 Common moeA molybdopterin biosynthesis protein MoeA BCE_3581 195 COG0303 MoeA, Molybdopterin biosynthesis enzyme Coenzyme metabolism 42783692 Common - hypothetical protein BCE_4646 7 COG1719 COG1719, Predicted hydrocarbon binding protein (contains V4R domain) General function prediction only 42782934 Common rimM 16S rRNA-processing protein BCE_3884 191 COG0806 RimM, RimM protein, required for 16S rRNA processing Translation, ribosomal structure and biogenesis 42781030 Common - hypothetical protein BCE_1961 111 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 42783936 Pathogen - hypothetical protein BCE_4890 1 None None None 42780111 Pathogen - conserved hypothetical protein subfamily, putative BCE_1035 1 None None None 42781650 Common natA ATP-binding transport protein NatA BCE_2589 244 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42781422 Common prsA peptidylprolyl isomerase BCE_2359 169 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 42780512 Common - iron compound ABC transporter, permease protein, putative BCE_1438 212 COG1178 ThiP, ABC-type Fe3+ transport system, permease component Inorganic ion transport and metabolism 42781165 Common - acetyltransferase, GNAT family BCE_2099 110 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782122 Common - ycgF BCE_3066 73 COG1280 RhtB, Putative threonine efflux protein Amino acid transport and metabolism 42779296 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_0215 196 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42779873 Common - ABC transporter, ATP-binding protein BCE_0796 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 42780936 Common - ABC transporter, permease protein BCE_1866 49 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 42784458 Common - hypothetical protein BCE_5413 4 None None None 42779835 Common - proton/peptide symporter family protein BCE_0757 79 COG3104 PTR2, Dipeptide/tripeptide permease Amino acid transport and metabolism 42780548 Pathogen - ABC transporter, permease protein, putative BCE_1474 1 None None None 42779344 Common - amino acid permease BCE_0263 192 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42781159 Pathogen - hypothetical protein BCE_2093 1 None None None 42782331 Common - hypothetical protein BCE_3277 47 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42782834 Common - hypothetical protein BCE_3784 2 None None None 42783904 Common gdH glucose-1-dehydrogenase BCE_4858 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42779952 Pathogen - hypothetical protein BCE_0876 1 None None None 42781567 Common - hypothetical protein BCE_2505 27 COG3339 COG3339, Uncharacterized conserved protein Function unknown 42782875 Common - sugar ABC transporter, ATP-binding protein BCE_3825 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 42783235 Common bioA adenosylmethionine--8-amino-7-oxononanoate transaminase BCE_4189 237 COG0161 BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Coenzyme metabolism 42779862 Common - phosphate ABC transporter, permease protein, putative BCE_0785 228 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 42781508 Common - acetyltransferase, GNAT family BCE_2446 13 COG1357 COG1357, Uncharacterized low-complexity proteins Function unknown 42781049 Common - ccdC protein BCE_1980 6 COG4846 CcdC, Membrane protein involved in cytochrome C biogenesis Posttranslational modification, protein turnover, chaperones 42780927 Common - lipoprotein, putative BCE_1857 2 None None None 42781659 Common - transposase, IS605 OrfB family BCE_2599 24 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42782527 Common - transposase, IS605 family BCE_3476 67 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42783639 Common - thiJ/pfpI family protein BCE_4593 89 COG0693 ThiJ, Putative intracellular protease/amidase General function prediction only 42779524 Common - translation initiation factor, putative, aIF-2BI family BCE_0443 59 COG0182 COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family Translation, ribosomal structure and biogenesis 42780635 Common - hypothetical protein BCE_1561 8 COG4758 COG4758, Predicted membrane protein Function unknown 42783818 Common - mutT/nudix family protein BCE_4772 13 None None None 42781906 Common - N-acetylmuramoyl-L-alanine amidase BCE_2849 28 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42783737 Common insB InsB BCE_4691 20 COG1662 InsB, Transposase and inactivated derivatives, IS1 family DNA replication, recombination, and repair 42779620 Common - polysaccharide deacetylase, putative BCE_0540 113 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42779820 Common - alcohol dehydrogenase, zinc-containing BCE_0742 215 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 42780498 Common - small, acid-soluble spore protein, alpha/beta family BCE_1424 14 None None None 42780710 Common spoIVA stage IV sporulation protein A BCE_1636 15 None None None 42780872 Pathogen - hypothetical protein BCE_1800 1 None None None 42780501 Common - transcriptional regulator, PadR family BCE_1427 37 COG1695 COG1695, Predicted transcriptional regulators Transcription 42783077 Common - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative BCE_4030 168 COG2171 DapD, Tetrahydrodipicolinate N-succinyltransferase Amino acid transport and metabolism 42780175 Common - alcohol dehydrogenase, zinc-containing BCE_1099 178 COG0604 Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases Energy production and conversion / General function prediction only 42782716 Common - N-acetylmuramoyl-L-alanine amidase, putative BCE_3666 27 COG3023 AmpD, Negative regulator of beta-lactamase expression Defense mechanisms 161511018 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_4759 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42779190 Common rpsJ 30S ribosomal protein S10 BCE_0109 246 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 42782234 Common vicR DNA-binding response regulator VicR BCE_3179 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782251 Common - peptidoglycan N-acetylglucosamine deacetylase A BCE_3196 86 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42780680 Common - hypothetical protein BCE_1606 18 COG3601 COG3601, Predicted membrane protein Function unknown 42781648 Common - hypothetical protein BCE_2587 4 COG2514 COG2514, Predicted ring-cleavage extradiol dioxygenase General function prediction only 42779330 Common - oligopeptide ABC transporter, permease protein BCE_0249 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42781441 Common yqiQ carboxyvinyl-carboxyphosphonate phosphorylmutase BCE_2378 133 COG2513 PrpB, PEP phosphonomutase and related enzymes Carbohydrate transport and metabolism 42780399 Common - cell cycle protein, FtsW/RodA/SpoVE family BCE_1325 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 42780963 Pathogen - hypothetical protein BCE_1894 1 None None None 42780720 Common - TPR domain protein BCE_1646 116 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 42779931 Common - DEAD/DEAH box helicase domain protein BCE_0855 93 COG1204 COG1204, Superfamily II helicase General function prediction only 42783774 Common fxsA FxsA BCE_4728 63 COG3030 FxsA, Protein affecting phage T7 exclusion by the F plasmid General function prediction only 42784053 Pathogen - hypothetical protein BCE_5007 1 None None None 42782326 Common - DNA-binding response regulator BCE_3272 222 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782496 Pathogen - hypothetical protein BCE_3443 1 COG3708 COG3708, Uncharacterized protein conserved in bacteria Function unknown 42779598 Common - tellurite resistance protein, putative BCE_0518 41 COG3853 TelA, Uncharacterized protein involved in tellurite resistance Inorganic ion transport and metabolism 42780662 Common deoD purine nucleoside phosphorylase BCE_1588 98 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 42779243 Common - hypothetical protein BCE_0162 57 COG1476 COG1476, Predicted transcriptional regulators Transcription 42779366 Common - redox-sensing transcriptional repressor Rex BCE_0285 56 COG2344 COG2344, AT-rich DNA-binding protein General function prediction only 42779837 Common brnQ branched-chain amino acid transport system II carrier protein BCE_0759 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42782659 Common - ABC transporter, permease protein BCE_3609 12 None None None 42781307 Common - neutral metalloprotease, putative BCE_2242 9 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 42783350 Common yqhJ glycine dehydrogenase subunit 1 BCE_4304 172 COG0403 GcvP, Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain Amino acid transport and metabolism 42779981 Pathogen - hypothetical protein BCE_0905 1 None None None 42783259 Common mgtC MgtC family protein BCE_4213 118 COG1285 SapB, Uncharacterized membrane protein Function unknown 42780103 Common - DnaD domain protein BCE_1027 10 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 42782041 Pathogen - hypothetical protein BCE_2985 1 None None None 42781757 Common - permease, putative BCE_2699 102 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42780657 Common - sensor histidine kinase, putative BCE_1583 223 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 42781101 Pathogen - hypothetical protein BCE_2032 1 None None None 42780778 Common - hypothetical protein BCE_1704 2 None None None 42782480 Common - lipase/acylhydrolase domain protein BCE_3427 45 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 42783303 Common accC acetyl-CoA carboxylase biotin carboxylase subunit BCE_4257 233 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 42784530 Common - ABC transporter, ATP-binding protein BCE_5485 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42783375 Pathogen - hypothetical protein BCE_4329 1 None None None 42784624 Common sodA superoxide dismutase, Mn BCE_5579 206 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 42780868 Common - hypothetical protein BCE_1796 9 COG4392 COG4392, Predicted membrane protein Function unknown 42783641 Pathogen - hypothetical protein BCE_4595 1 None None None 42782700 Common - hypothetical protein BCE_3650 5 None None None 42782868 Common - ACT domain protein BCE_3818 5 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 42780208 Common lstR lineage-specific thermal regulator protein BCE_1132 8 COG1695 COG1695, Predicted transcriptional regulators Transcription 42781300 Common - arginyl-tRNA synthetase BCE_2235 10 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42783451 Pathogen - hypothetical protein BCE_4405 1 None None None 42784606 Common - glycosyl transferase domain protein BCE_5561 210 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42782588 Pathogen - hypothetical protein BCE_3538 1 None None None 42783630 Common - phosphoesterase, putative BCE_4584 48 COG0622 COG0622, Predicted phosphoesterase General function prediction only 42780452 Common - hypothetical protein BCE_1378 2 None None None 42781539 Common - probable spore germination protein F-related protein BCE_2477 2 None None None 42781586 Pathogen - hypothetical protein BCE_2524 1 None None None 42784036 Common - sensor histidine kinase BCE_4990 219 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42782072 Common - transcriptional regulator, putative BCE_3016 69 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 42779456 Common - hypothetical protein BCE_0375 15 None None None 42782393 Pathogen - hypothetical protein BCE_3340 1 None None None 42780643 Pathogen - hypothetical protein BCE_1569 1 None None None 42781349 Common dat D-amino acid aminotransferase BCE_2285 192 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 42783722 Common - hypothetical protein BCE_4676 45 COG4928 COG4928, Predicted P-loop ATPase General function prediction only 42780384 Common - hypothetical protein BCE_1310 85 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 42780976 Common lacC tagatose-6-phosphate kinase BCE_1907 104 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 42783465 Common psd phosphatidylserine decarboxylase BCE_4419 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 42783454 Common comEA comE operon protein 1 BCE_4408 116 COG1555 ComEA, DNA uptake protein and related DNA-binding proteins DNA replication, recombination, and repair 42782067 Common mqo malate:quinone oxidoreductase BCE_3011 58 COG0579 COG0579, Predicted dehydrogenase General function prediction only 42784489 Common - low molecular weight phosphotyrosine protein phosphatase family protein BCE_5444 122 COG0394 Wzb, Protein-tyrosine-phosphatase Signal transduction mechanisms 42783445 Common - hypothetical protein BCE_4399 147 COG1733 COG1733, Predicted transcriptional regulators Transcription 42779119 Common - primase-related protein BCE_0038 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 42780704 Common - hypothetical protein BCE_1630 4 None None None 42779120 Common ksgA dimethyladenosine transferase BCE_0039 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 42781951 Common - acetyltransferase, GNAT family BCE_2895 9 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42782022 Common - hypothetical protein BCE_2966 4 None None None 42784338 Pathogen - hypothetical protein BCE_5292 1 None None None 42780407 Common - hypothetical protein BCE_1333 4 None None None 42779570 Common - hypothetical protein BCE_0490 32 COG0011 COG0011, Uncharacterized conserved protein Function unknown 42780339 Pathogen - hypothetical protein BCE_1265 1 None None None 42781842 Common - tryptophan 2,3-dioxygenase family protein BCE_2785 42 COG3483 TDO2, Tryptophan 2,3-dioxygenase (vermilion) Amino acid transport and metabolism 42783547 Common yajC preprotein translocase subunit YajC BCE_4501 177 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 42781191 Pathogen - lipoprotein, putative BCE_2125 1 None None None 42782749 Common - hypothetical protein BCE_3699 11 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 42784435 Common - glycosyl transferase, group 1 family protein BCE_5390 171 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 42784527 Common - DNA-binding response regulator BCE_5482 212 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42781530 Pathogen - hypothetical protein BCE_2468 1 None None None 42780027 Common - hypothetical protein BCE_0951 6 None None None 42782398 Common - reverse transcriptase/endonuclease protein BCE_3345 91 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 42779433 Common - putative lipid kinase BCE_0352 121 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 42779797 Common - DNA-binding response regulator BCE_0719 224 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782757 Pathogen - hypothetical protein BCE_3707 1 None None None 42784110 Common - pyridine nucleotide-disulphide oxidoreductase BCE_5064 203 COG1252 Ndh, NADH dehydrogenase, FAD-containing subunit Energy production and conversion 42779326 Common - ABC transporter, ATP-binding protein BCE_0245 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42784580 Common - O-acetylhomoserine aminocarboxypropyltransferase BCE_5535 206 COG2873 MET17, O-acetylhomoserine sulfhydrylase Amino acid transport and metabolism 42779518 Common - hypothetical protein BCE_0437 4 COG2230 Cfa, Cyclopropane fatty acid synthase and related methyltransferases Cell envelope biogenesis, outer membrane 42782489 Common - AMP-binding protein BCE_3436 223 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42782034 Common - hypothetical protein BCE_2978 12 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 42782678 Common - small acid-soluble spore protein Tlp BCE_3628 6 None None None 42780491 Common - iron-sulfur cluster-binding protein BCE_1417 94 COG1139 COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain Energy production and conversion 42782219 Common - transcriptional regulator, LysR family BCE_3164 192 COG0583 LysR, Transcriptional regulator Transcription 42781808 Pathogen - hypothetical protein BCE_2751 1 None None None 42783560 Common nadC nicotinate-nucleotide pyrophosphorylase BCE_4514 204 COG0157 NadC, Nicotinate-nucleotide pyrophosphorylase Coenzyme metabolism 42780842 Common fliI flagellum-specific ATP synthase BCE_1769 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 42780533 Common - 6-pyruvoyl tetrahydrobiopterin synthase, putative BCE_1459 127 COG0720 COG0720, 6-pyruvoyl-tetrahydropterin synthase Coenzyme metabolism 42781915 Common - carboxymuconolactone decarboxylase BCE_2858 29 COG0599 COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit Function unknown 42784027 Common - hypothetical protein BCE_4981 27 None None None 42784596 Common - hypothetical protein BCE_5551 133 COG2860 COG2860, Predicted membrane protein Function unknown 42779289 Common - oligopeptide ABC transporter, ATP-binding protein BCE_0208 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 42784342 Pathogen - hypothetical protein BCE_5297 1 None None None 42779107 Common - csfB protein, putative BCE_0026 3 None None None 42779918 Common - type I restriction-modification enzyme, S subunit, putative BCE_0842 117 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 42783554 Common - Integral membrane protein domain protein BCE_4508 188 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42783214 Pathogen - hypothetical protein BCE_4168 1 None None None 42779146 Common hslO Hsp33-like chaperonin BCE_0065 139 COG1281 COG1281, Disulfide bond chaperones of the HSP33 family Posttranslational modification, protein turnover, chaperones 42779774 Common - sensory box/GGDEF family protein BCE_0696 192 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 42779644 Common pflA pyruvate formate-lyase-activating enzyme BCE_0564 123 COG1180 PflA, Pyruvate-formate lyase-activating enzyme Posttranslational modification, protein turnover, chaperones 42780403 Pathogen - hypothetical protein BCE_1329 1 None None None 42782538 Common - iron compound ABC transporter, permease protein BCE_3487 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42784512 Common - hypothetical protein BCE_5467 3 None None None 42784453 Common - ABC transporter, permease protein, putative BCE_5408 57 COG1668 NatB, ABC-type Na+ efflux pump, permease component Energy production and conversion / Inorganic ion transport and metabolism 42784469 Common nuoB NADH dehydrogenase subunit B BCE_5424 192 COG0377 NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases Energy production and conversion 42783710 Common - hypothetical protein BCE_4664 22 COG4895 COG4895, Uncharacterized conserved protein Function unknown 42782190 Common - hypothetical protein BCE_3135 24 COG1511 COG1511, Predicted membrane protein Function unknown 42784068 Common - lipase family protein BCE_5022 20 COG3675 COG3675, Predicted lipase Lipid metabolism 42783670 Pathogen - hypothetical protein BCE_4624 1 None None None 42780237 Pathogen - hypothetical protein BCE_1162 1 None None None 42779938 Common - transcriptional regulator, MarR family BCE_0862 62 COG1846 MarR, Transcriptional regulators Transcription 42779329 Common - oligopeptide ABC transporter, oligopeptide-binding protein, putative BCE_0248 214 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 42781226 Common - phosphoglycerate mutase family protein BCE_2160 121 COG0406 GpmB, Fructose-2,6-bisphosphatase Carbohydrate transport and metabolism 42780553 Common - transcriptional regulator, AsnC family BCE_1479 152 COG1522 Lrp, Transcriptional regulators Transcription 42781761 Common - glycerophosphoryl diester phosphodiesterase, putative BCE_2703 168 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 42783107 Common - aminotransferase A BCE_4060 240 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 42782282 Common - hypothetical protein BCE_3227 55 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42779755 Common aspA aspartate ammonia-lyase BCE_0677 237 COG1027 AspA, Aspartate ammonia-lyase Amino acid transport and metabolism 42780798 Common - fatty acid hydroxylase-like protein BCE_1724 20 COG3000 ERG3, Sterol desaturase Lipid metabolism 42782158 Common - hypothetical protein BCE_3102 67 COG0730 COG0730, Predicted permeases General function prediction only 42782182 Common - hypothetical protein BCE_3127 68 COG1434 COG1434, Uncharacterized conserved protein Function unknown 42784012 Common - FeoA family protein BCE_4966 5 COG1918 FeoA, Fe2+ transport system protein A Inorganic ion transport and metabolism 42783096 Pathogen - hypothetical protein BCE_4049 1 None None None 42780783 Pathogen - hypothetical protein BCE_1709 1 None None None 42780838 Common fliE flagellar hook-basal body protein FliE BCE_1765 3 COG1677 FliE, Flagellar hook-basal body protein Cell motility and secretion / Intracellular trafficking and secretion 42782784 Common - GTP-binding protein BCE_3734 216 COG2262 HflX, GTPases General function prediction only 42783507 Common greA transcription elongation factor GreA BCE_4461 204 COG0782 GreA, Transcription elongation factor Transcription 42782111 Pathogen - hypothetical protein BCE_3055 1 None None None 42779188 Common fusA elongation factor G BCE_0107 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 42781809 Common gerXC spore germination protein XC BCE_2752 4 None None None 42783009 Common - sporulation specific penicillin-binding protein BCE_3961 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42782916 Common pyrH uridylate kinase BCE_3866 243 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 42782245 Common - hypothetical protein BCE_3190 40 COG3002 COG3002, Uncharacterized protein conserved in bacteria Function unknown 42784289 Common cggR gapA transcriptional regulator CggR BCE_5243 21 COG2390 DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain Transcription 42784535 Pathogen - hypothetical protein BCE_5490 1 None None None 42780951 Common - hypothetical protein BCE_1882 16 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42781798 Common - mutT/nudix family protein BCE_2741 17 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 42782197 Common - hypothetical protein BCE_3142 4 None None None 42779322 Common - hypothetical protein BCE_0241 7 COG1085 GalT, Galactose-1-phosphate uridylyltransferase Energy production and conversion 42779957 Common - transcription antiterminator, BglG family BCE_0881 46 COG3711 BglG, Transcriptional antiterminator Transcription 42779653 Common - hypothetical protein BCE_0573 1 None None None 42780302 Common - S-layer protein, putative BCE_1227 26 None None None 42781209 Common - amidase BCE_2143 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 42784197 Common - methyl-accepting chemotaxis protein BCE_5151 173 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42779401 Common purC phosphoribosylaminoimidazole-succinocarboxamide synthase BCE_0320 214 COG0152 PurC, Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Nucleotide transport and metabolism 42782270 Pathogen - IS231-related transposase, truncation BCE_3215 1 None None None 42779585 Common - DNA-binding protein BCE_0505 63 COG1476 COG1476, Predicted transcriptional regulators Transcription 42780700 Common - isopentenyl pyrophosphate isomerase BCE_1626 88 COG1304 LldD, L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases Energy production and conversion 42781083 Common - branched-chain amino acid ABC transporter, permease protein BCE_2014 142 COG4177 LivM, ABC-type branched-chain amino acid transport system, permease component Amino acid transport and metabolism 42784516 Common - transcriptional regulator, TetR family BCE_5471 82 COG1309 AcrR, Transcriptional regulator Transcription 42783964 Common - ATP synthase protein I, putative BCE_4918 4 None None None 42783176 Pathogen - hypothetical protein BCE_4129 1 None None None 42779180 Common rplJ 50S ribosomal protein L10 BCE_0099 216 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 42779883 Pathogen - hypothetical protein BCE_0806 1 None None None 42780287 Common - Ser/Thr protein phosphatase family protein BCE_1212 77 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 42780356 Common - hypothetical protein BCE_1282 74 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42784592 Common - major facilitator family transporter BCE_5547 218 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42782055 Common - hypothetical protein BCE_2999 17 None None None 42782368 Common - hypothetical protein BCE_3315 42 COG2031 AtoE, Short chain fatty acids transporter Lipid metabolism 42783775 Common pykA pyruvate kinase BCE_4729 231 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 42781884 Common - topology modulation protein BCE_2827 47 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 42782131 Common - nitroreductase family protein BCE_3075 123 COG0778 NfnB, Nitroreductase Energy production and conversion 42780220 Common prsA peptidylprolyl isomerase BCE_1145 163 COG0760 SurA, Parvulin-like peptidyl-prolyl isomerase Posttranslational modification, protein turnover, chaperones 42780612 Common - sulfatase BCE_1538 70 COG1368 MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily Cell envelope biogenesis, outer membrane 42781711 Common - hypothetical protein BCE_2652 6 None None None 42783372 Pathogen - hypothetical protein BCE_4326 1 None None None 42784503 Common rpmE2 50S ribosomal protein L31 type B BCE_5458 157 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 42780802 Common - hypothetical protein BCE_1728 2 None None None 42782863 Common - hypothetical protein BCE_3813 77 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 42783195 Pathogen - hypothetical protein BCE_4149 1 None None None 42783512 Common - conserved hypothetical protein TIGR00247 BCE_4466 186 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 42784399 Common - nucleoside transporter, NupC family BCE_5354 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42781921 Common - glycine oxidase, putative BCE_2864 153 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 42779810 Common rbsR ribose operon repressor BCE_0732 129 COG1609 PurR, Transcriptional regulators Transcription 42780309 Pathogen - hypothetical protein BCE_1234 1 None None None 42784675 Common spo0J stage 0 sporulation protein J BCE_5630 187 COG1475 Spo0J, Predicted transcriptional regulators Transcription 42783037 Common ctaE cytochrome c oxidase, subunit III BCE_3989 157 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 42782943 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_3893 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42782520 Common - hypothetical protein BCE_3469 71 COG1695 COG1695, Predicted transcriptional regulators Transcription 42780809 Common - hypothetical protein BCE_1735 6 None None None 42779727 Common - sensor histidine kinase BCE_0649 224 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42780229 Common ecsC EcsC protein BCE_1154 8 None None None 42780481 Common - hypothetical protein BCE_1407 85 COG2340 COG2340, Uncharacterized protein with SCP/PR1 domains Function unknown 42783608 Common loN2 ATP-dependent protease LA BCE_4562 235 COG1067 LonB, Predicted ATP-dependent protease Posttranslational modification, protein turnover, chaperones 42782768 Common tkt transketolase BCE_3718 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 42782212 Common - 5'-nucleotidase, putative BCE_3157 135 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 42781269 Common - hypothetical protein BCE_2204 45 COG1721 COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) General function prediction only 42783675 Common - N-acyl-D-amino-acid deacylase family protein BCE_4629 11 COG0402 SsnA, Cytosine deaminase and related metal-dependent hydrolases Nucleotide transport and metabolism / General function prediction only 42779701 Common - citrate transporter, CitM family BCE_0622 42 COG2851 CitM, H+/citrate symporter Energy production and conversion 42784183 Common - hypothetical protein BCE_5137 4 None None None 42783485 Common phhA phenylalanine 4-monooxygenase BCE_4439 45 COG3186 COG3186, Phenylalanine-4-hydroxylase Amino acid transport and metabolism 42784567 Common - hypothetical protein BCE_5522 1 None None None 42780769 Common maP methionine aminopeptidase BCE_1695 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 42781608 Common - hypothetical protein BCE_2547 61 COG3272 COG3272, Uncharacterized conserved protein Function unknown 42781793 Common - acetyltransferase, GNAT family BCE_2736 2 None None None 42782936 Common rpsP 30S ribosomal protein S16 BCE_3886 213 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 42783413 Pathogen - vrrA protein BCE_4367 1 None None None 42784200 Pathogen - hypothetical protein BCE_5154 1 None None None 42781559 Pathogen - hypothetical protein BCE_2497 1 None None None 42780217 Common - dnak protein, truncation BCE_1142 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 42782470 Pathogen - hypothetical protein BCE_3417 1 None None None 42782117 Common nrtC taurine ABC transporter, ATP-binding protein BCE_3061 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 42784083 Common pgi glucose-6-phosphate isomerase BCE_5037 207 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 42783906 Pathogen - hypothetical protein BCE_4860 1 None None None 42784163 Common - nifU domain protein BCE_5117 169 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 42783644 Pathogen - hypothetical protein BCE_4598 2 None None None 42782277 Common - radical SAM domain protein BCE_3222 77 COG0641 AslB, Arylsulfatase regulator (Fe-S oxidoreductase) General function prediction only 42780024 Common sasP small acid-soluble spore protein BCE_0948 13 None None None 42779971 Common cotJC cotJC protein BCE_0895 46 COG3546 COG3546, Mn-containing catalase Inorganic ion transport and metabolism 42782546 Common - transcriptional regulator, LysR family BCE_3495 191 COG0583 LysR, Transcriptional regulator Transcription 42779907 Common - nitroreductase family protein BCE_0831 81 COG0778 NfnB, Nitroreductase Energy production and conversion 42779610 Common - dedA family protein BCE_0530 115 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 42779928 Pathogen - hypothetical protein BCE_0852 1 None None None 42782116 Common b0367 taurine ABC transporter, permease protein BCE_3060 205 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 42784419 Common - efflux transporter, RND family, MFP subunit BCE_5374 42 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 42779583 Common - transcriptional regulator, TetR family BCE_0503 53 COG1309 AcrR, Transcriptional regulator Transcription 42783192 Common - transcriptional regulator, GntR family BCE_4146 139 COG1725 COG1725, Predicted transcriptional regulators Transcription 42784650 Pathogen - hypothetical protein BCE_5605 1 None None None 42779147 Common cysK cysteine synthase A BCE_0066 222 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 42784322 Pathogen - hypothetical protein BCE_5276 1 None None None 42780173 Pathogen - hypothetical protein BCE_1097 1 None None None 42784577 Common - hypothetical protein BCE_5532 15 COG2364 COG2364, Predicted membrane protein Function unknown 42780094 Common - type III restriction-modification system enzyme, M subunit BCE_1018 91 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 42781782 Pathogen - hypothetical protein BCE_2725 1 None None None 42780999 Pathogen - hypothetical protein BCE_1930 1 None None None 42781264 Common - ABC1 family protein BCE_2198 185 COG0661 AarF, Predicted unusual protein kinase General function prediction only 42784108 Common - hypothetical protein BCE_5062 3 None None None 42779212 Common adk adenylate kinase BCE_0131 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 42783369 Common - hypothetical protein BCE_4323 3 None None None 42784223 Common - methionyl-tRNA synthetase BCE_5177 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42781023 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_1954 204 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42780323 Common gerPD spore germination protein GerPD BCE_1249 2 None None None 42779153 Common folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase BCE_0072 202 COG0801 FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Coenzyme metabolism 42780878 Common - DNA-binding protein BCE_1807 11 COG1476 COG1476, Predicted transcriptional regulators Transcription 42781628 Common - S-adenosylhomocysteine nucleosidase BCE_2567 82 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 42781490 Common - hypothetical protein BCE_2428 51 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42783158 Common - sensory box/GGDEF family protein, putative BCE_4111 178 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 42781065 Pathogen - hypothetical protein BCE_1996 1 None None None 42779482 Common - hypothetical protein BCE_0401 4 None None None 42781517 Common - CAAX amino terminal protease family protein BCE_2455 39 None None None 42781927 Common - hypothetical protein BCE_2871 3 None None None 42782144 Common - transcriptional regulator, AraC family BCE_3088 144 COG3449 COG3449, DNA gyrase inhibitor DNA replication, recombination, and repair 42781889 Common - acetyltransferase, GNAT family BCE_2832 34 None None None 42784394 Pathogen - hypothetical protein BCE_5349 1 None None None 42779134 Common - stage V sporulation protein B, putative BCE_0053 25 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42780482 Pathogen - hypothetical protein BCE_1408 1 None None None 42782889 Common spoVFB dipicolinate synthase subunit B BCE_3839 18 COG0452 Dfp, Phosphopantothenoylcysteine synthetase/decarboxylase Coenzyme metabolism 42783950 Common - hypothetical protein BCE_4904 98 COG2267 PldB, Lysophospholipase Lipid metabolism 42779948 Common - hypothetical protein BCE_0872 10 COG0730 COG0730, Predicted permeases General function prediction only 42779992 Common - hypothetical protein BCE_0916 2 COG2259 COG2259, Predicted membrane protein Function unknown 42782819 Common - iron compound ABC transporter, permease protein BCE_3769 186 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42779408 Common purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase BCE_0327 219 COG0138 PurH, AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) Nucleotide transport and metabolism 42780745 Common - bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon BCE_1671 222 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 42781969 Pathogen - hypothetical protein BCE_2913 1 None None None 42784070 Common glgP glycogen phosphorylase BCE_5024 143 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 42779416 Common ligA NAD-dependent DNA ligase LigA BCE_0335 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 42784633 Common galE UDP-glucose 4-epimerase BCE_5588 232 COG1087 GalE, UDP-glucose 4-epimerase Cell envelope biogenesis, outer membrane 42781452 Common - exonuclease SbcD, putative BCE_2389 10 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 42782592 Common - acetyltransferase, GNAT family BCE_3542 27 COG3981 COG3981, Predicted acetyltransferase General function prediction only 42784149 Common - lipoprotein, putative BCE_5103 3 None None None 42782549 Common - acetyltransferase, GNAT family BCE_3498 95 COG3153 COG3153, Predicted acetyltransferase General function prediction only 42782038 Common - PTS system, lactose/cellobiose specific IIB subunit BCE_2982 30 COG3414 SgaB, Phosphotransferase system, galactitol-specific IIB component Carbohydrate transport and metabolism 42782440 Common - hypothetical protein BCE_3387 90 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42780992 Common - sodium-dependent transporter BCE_1923 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 42784406 Pathogen - hypothetical protein BCE_5361 1 None None None 42779686 Common - hypothetical protein BCE_0606 71 COG2718 COG2718, Uncharacterized conserved protein Function unknown 42782657 Common - RNA polymerase sigma-70 factor, ECF subfamily BCE_3607 165 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42779752 Common - nucleoside transporter, NupC family BCE_0674 68 COG1972 NupC, Nucleoside permease Nucleotide transport and metabolism 42781716 Common - hypothetical protein BCE_2657 4 None None None 42779263 Common - Tn7-like transposition protein A BCE_0182 18 None None None 42780166 Common - sensor histidine kinase/response regulator BCE_1090 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779557 Common - transcriptional regulator, Crp family BCE_0477 128 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 42782880 Common - hypothetical protein BCE_3830 2 None None None 42779241 Common - ATP-dependent helicase, DinG family, putative BCE_0160 114 COG1199 DinG, Rad3-related DNA helicases Transcription / DNA replication, recombination, and repair 42780678 Common - peptidase, M23/M37 family BCE_1604 189 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 42782338 Common serC phosphoserine aminotransferase BCE_3285 117 COG1932 SerC, Phosphoserine aminotransferase Coenzyme metabolism / Amino acid transport and metabolism 42783470 Common rpmG 50S ribosomal protein L33 BCE_4424 89 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 42779356 Common - S1 RNA binding domain protein BCE_0275 140 COG2183 Tex, Transcriptional accessory protein Transcription 42783557 Common - forespore-specific protein, putative BCE_4511 2 None None None 42784560 Common - lipoate-protein ligase A, putative BCE_5515 17 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 42779541 Common - hypothetical protein BCE_0461 108 COG1878 COG1878, Predicted metal-dependent hydrolase General function prediction only 42780736 Common mgsA methylglyoxal synthase BCE_1662 88 COG1803 MgsA, Methylglyoxal synthase Carbohydrate transport and metabolism 42780757 Pathogen - hypothetical protein BCE_1683 1 None None None 42784636 Common - hypothetical protein BCE_5591 9 None None None 42781836 Common - lipoprotein, putative BCE_2779 3 None None None 42782408 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_3355 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42781248 Common - hypothetical protein BCE_2182 5 None None None 42781419 Pathogen - hypothetical protein BCE_2356 1 None None None 42779336 Pathogen - hypothetical protein BCE_0255 1 None None None 42783577 Common - DNA-binding response regulator BCE_4531 217 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42780824 Pathogen - hypothetical protein BCE_1751 1 None None None 42782416 Pathogen - hypothetical protein BCE_3363 1 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42779980 Pathogen - hypothetical protein BCE_0904 1 None None None 42784268 Common - hypothetical protein BCE_5222 4 None None None 42781486 Common - putative transporter-like protein BCE_2424 3 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42781086 Common - hypothetical protein BCE_2017 18 None None None 42783332 Common - sugar-binding transcriptional regulator, LacI family BCE_4286 127 COG1609 PurR, Transcriptional regulators Transcription 42779467 Common - phage-associated helicase BCE_0386 91 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 42779740 Common - transcriptional regulator, ArsR family BCE_0662 184 COG0640 ArsR, Predicted transcriptional regulators Transcription 42781721 Common - hypothetical protein BCE_2662 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42782256 Common - hydrolase, alpha/beta fold family BCE_3201 124 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783141 Pathogen - hypothetical protein BCE_4094 1 None None None 42779987 Pathogen - hypothetical protein BCE_0911 1 None None None 42779459 Common - transcriptional regulator, TetR family BCE_0378 34 COG1309 AcrR, Transcriptional regulator Transcription 42779343 Common - homogentisate 1,2-dioxygenase, putative BCE_0262 44 COG3508 HmgA, Homogentisate 1,2-dioxygenase Secondary metabolites biosynthesis, transport, and catabolism 42782185 Pathogen - hypothetical protein BCE_3130 1 None None None 42783423 Common - CBS domain protein BCE_4377 31 COG2905 COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains Signal transduction mechanisms 42780829 Common - hypothetical protein BCE_1756 3 COG1728 COG1728, Uncharacterized protein conserved in bacteria Function unknown 42782910 Common proS prolyl-tRNA synthetase BCE_3860 246 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42784369 Common celC PTS system, cellobiose-specific IIA component BCE_5324 31 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 42783533 Pathogen - hypothetical protein BCE_4487 1 None None None 42781605 Common - ABC transporter, permease protein, putative BCE_2544 123 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 42783339 Common - hypothetical protein BCE_4293 5 None None None 42780478 Common - hypothetical protein BCE_1404 2 None None None 42784405 Common - hypothetical protein BCE_5360 24 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 42781703 Pathogen - hypothetical protein BCE_2644 1 None None None 42782492 Common - transcriptional regulator, ArsR family BCE_3439 85 COG4189 COG4189, Predicted transcriptional regulator Transcription 42782635 Common fdhD formate dehydrogenase accessory protein BCE_3585 137 COG1526 FdhD, Uncharacterized protein required for formate dehydrogenase activity Energy production and conversion 42782177 Common - transcriptional regulator, IclR family BCE_3122 122 COG1414 IclR, Transcriptional regulator Transcription 42784421 Common - lipoprotein, putative BCE_5376 107 COG1840 AfuA, ABC-type Fe3+ transport system, periplasmic component Inorganic ion transport and metabolism 42781227 Common - Cof-like hydrolase BCE_2161 126 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42783113 Common malL oligo-1,6-glucosidase BCE_4066 166 COG0366 AmyA, Glycosidases Carbohydrate transport and metabolism 42781697 Common - S-adenosylhomocysteine nucleosidase BCE_2638 85 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 42782662 Common - transcriptional regulator, TetR family BCE_3612 23 COG1309 AcrR, Transcriptional regulator Transcription 42783504 Common - hypothetical protein BCE_4458 2 None None None 42783039 Common ctaC cytochrome c oxidase, subunit II BCE_3991 158 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 42782795 Common fruB 1-phosphofructokinase BCE_3745 116 COG1105 FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) Carbohydrate transport and metabolism 42781254 Pathogen - hypothetical protein BCE_2188 1 None None None 42783393 Common - nucleotidyl transferase family protein BCE_4347 238 COG1208 GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis 42783746 Common - hypothetical protein BCE_4700 105 COG1566 EmrA, Multidrug resistance efflux pump Defense mechanisms 42784428 Common lytR membrane-bound transcriptional regulator LytR BCE_5383 59 COG1316 LytR, Transcriptional regulator Transcription 42779927 Pathogen - hypothetical protein BCE_0851 1 None None None 42783324 Common splB spore photoproduct lyase BCE_4278 27 COG1533 SplB, DNA repair photolyase DNA replication, recombination, and repair 42783832 Common ezrA septation ring formation regulator EzrA BCE_4786 50 COG4477 EzrA, Negative regulator of septation ring formation Cell division and chromosome partitioning 42780485 Common - transcriptional regulator, putative BCE_1411 49 COG3835 CdaR, Sugar diacid utilization regulator Transcription / Signal transduction mechanisms 42781436 Common - hypothetical protein BCE_2373 3 COG4841 COG4841, Uncharacterized protein conserved in bacteria Function unknown 42784658 Common - YycH protein BCE_5613 8 COG4863 COG4863, Uncharacterized protein conserved in bacteria Function unknown 42779310 Pathogen - hypothetical protein BCE_0229 1 None None None 42782202 Common - Tn554-related, transposase A BCE_3147 172 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42780310 Pathogen - hypothetical protein BCE_1235 1 None None None 42780557 Common - 2-nitropropane dioxygenase BCE_1483 134 COG2070 COG2070, Dioxygenases related to 2-nitropropane dioxygenase General function prediction only 42783007 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase BCE_3959 214 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 42780696 Common ansA L-asparaginase BCE_1622 136 COG0252 AnsB, L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis 42780083 Pathogen - hypothetical protein BCE_1007 1 None None None 42780684 Common - ATP-dependent DNA helicase BCE_1610 223 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 42779932 Pathogen - hypothetical protein BCE_0856 1 None None None 42781732 Common - hypothetical protein BCE_2673 40 COG2320 GrpB, Uncharacterized conserved protein Function unknown 42783481 Pathogen - hypothetical protein BCE_4435 1 None None None 42781872 Common - glycine betaine/L-proline ABC transporter, permease protein BCE_2815 153 COG4176 ProW, ABC-type proline/glycine betaine transport system, permease component Amino acid transport and metabolism 42780370 Common - hypothetical protein BCE_1296 3 None None None 42784494 Pathogen - hypothetical protein BCE_5449 1 None None None 42784682 Common spoIIIJ OxaA-like protein precursor BCE_5637 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 42779175 Common rpmG 50S ribosomal protein L33 BCE_0094 68 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 42783255 Common sdhB L-serine dehydratase, iron-sulfur-dependent, beta subunit BCE_4209 125 COG1760 SdaA, L-serine deaminase Amino acid transport and metabolism 42783310 Common spoIIIAC stage III sporulation protein AC BCE_4264 15 None None None 42782789 Pathogen - hypothetical protein BCE_3739 1 None None None 42779256 Common - Tn7-like transposition protein B BCE_0175 47 None None None 42783360 Common - prolyl 4-hydroxylase, alpha subunit domain protein BCE_4314 25 None None None 42780195 Pathogen - hypothetical protein BCE_1119 2 None None None 42780744 Common panD aspartate alpha-decarboxylase BCE_1670 130 COG0853 PanD, Aspartate 1-decarboxylase Coenzyme metabolism 42782941 Common rnc ribonuclease III BCE_3891 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 42783825 Common - hypothetical protein BCE_4779 113 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 42780906 Common - cobalamin synthesis protein, putative BCE_1836 130 COG0523 COG0523, Putative GTPases (G3E family) General function prediction only 42782696 Common - acetyl-CoA acetyltransferase BCE_3646 174 COG0183 PaaJ, Acetyl-CoA acetyltransferase Lipid metabolism 42784628 Common - hypothetical protein BCE_5583 6 None None None 42783527 Common - rrf2 family protein BCE_4481 170 COG1959 COG1959, Predicted transcriptional regulator Transcription 42781002 Common ilvE branched-chain amino acid aminotransferase BCE_1933 208 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 42782466 Common - hypothetical protein BCE_3413 20 COG4702 COG4702, Uncharacterized conserved protein Function unknown 42783564 Common noxB FMN oxidoreductase BCE_4518 178 COG1902 NemA, NADH:flavin oxidoreductases, Old Yellow Enzyme family Energy production and conversion 42783932 Common - site-specific recombinase, phage integrase family BCE_4886 40 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42780058 Pathogen - hypothetical protein BCE_0982 1 None None None 42779474 Common - DNA-cytosine methyltransferase BCE_0393 79 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 42780335 Common katB catalase BCE_1261 127 COG0753 KatE, Catalase Inorganic ion transport and metabolism 42784302 Common ptsH phosphocarrier protein HPr BCE_5256 135 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 42783845 Pathogen - lipoprotein, putative BCE_4799 1 None None None 42782608 Common - hypothetical protein BCE_3558 9 COG4043 COG4043, Uncharacterized conserved protein Function unknown 42784235 Pathogen - hypothetical protein BCE_5189 1 None None None 42779706 Common - hypothetical protein BCE_0627 3 None None None 42779278 Common - ABC transporter, substrate-binding protein, putative BCE_0197 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 42782362 Common - major facilitator family transporter BCE_3309 180 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780152 Pathogen - lipoprotein, putative BCE_1076 1 None None None 42783700 Common - hypothetical protein BCE_4654 2 None None None 42782950 Common rpmB 50S ribosomal protein L28 BCE_3900 78 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 42783968 Common - hypothetical protein BCE_4922 32 COG0327 COG0327, Uncharacterized conserved protein Function unknown 42780319 Common addA ATP-dependent nuclease, subunit A BCE_1245 227 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 42780549 Common - ABC transporter, ATP-binding protein BCE_1475 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42780561 Common dltA D-alanine--D-alanyl carrier protein ligase BCE_1487 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 42780572 Pathogen - transcriptional regulator, Bla/Mec family BCE_1498 1 None None None 42782028 Pathogen - acetyltransferase, GNAT family BCE_2972 2 COG0456 RimI, Acetyltransferases General function prediction only 42779280 Common - oxidoreductase, FAD-binding BCE_0199 106 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 42782121 Pathogen - hypothetical protein BCE_3065 1 None None None 42783959 Common - acetyltransferase, GNAT family BCE_4913 63 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783168 Common nagB glucosamine-6-phosphate deaminase BCE_4121 92 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 42780139 Pathogen - hypothetical protein BCE_1063 1 None None None 42780069 Common - hypothetical protein BCE_0993 1 None None None 42780912 Pathogen - hypothetical protein BCE_1842 1 None None None 42781396 Common rocR arginine utilization regulatory protein RocR BCE_2333 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 42783591 Common radC DNA repair protein RadC BCE_4545 178 COG2003 RadC, DNA repair proteins DNA replication, recombination, and repair 42783764 Common polA DNA polymerase I BCE_4718 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 42784292 Common - conserved hypothetical protein TIGR01655 subfamily BCE_5246 8 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42784214 Pathogen - hypothetical protein BCE_5168 1 None None None 42780130 Common - dihydroxyacetone kinase family protein BCE_1054 77 COG2376 DAK1, Dihydroxyacetone kinase Carbohydrate transport and metabolism 42781973 Common - hypothetical protein BCE_2917 4 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 42781880 Common - acetyltransferase, GNAT family BCE_2823 91 COG2153 ElaA, Predicted acyltransferase General function prediction only 42781295 Common - hypothetical protein BCE_2230 83 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 42779781 Common - spore germination protein GerKA BCE_0703 15 None None None 42782920 Common - ATP-dependent protease ATP-binding subunit BCE_3870 209 COG1220 HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit Posttranslational modification, protein turnover, chaperones 42781019 Common - hypothetical protein BCE_1950 4 None None None 42781611 Common - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit BCE_2550 159 COG4770 COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit Lipid metabolism 42780008 Common - ABC transporter, substrate-binding protein, putative BCE_0932 170 COG4533 COG4533, ABC-type uncharacterized transport system, periplasmic component General function prediction only 42781118 Common - hypothetical protein BCE_2050 43 COG3576 COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase General function prediction only 42782644 Common - hypothetical protein BCE_3594 7 None None None 42784046 Common - carbohydrate kinase, PfkB family BCE_5000 103 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 42780497 Common - potassium uptake protein, TrkH family BCE_1423 86 COG0168 TrkG, Trk-type K+ transport systems, membrane components Inorganic ion transport and metabolism 42782683 Pathogen - hypothetical protein BCE_3633 1 None None None 42782812 Pathogen - hypothetical protein BCE_3762 1 None None None 42780013 Common - amino acid permease family protein BCE_0937 182 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42782354 Common - glyoxalase family protein BCE_3301 5 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42783358 Common - hypothetical protein BCE_4312 2 None None None 42783468 Pathogen - hypothetical protein BCE_4422 1 None None None 42780379 Common - MATE efflux family protein BCE_1305 167 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 42781649 Common - phosphotransferase enzyme family protein, putative BCE_2588 7 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42782469 Common sdaC serine transporter BCE_3416 34 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 42782078 Common - hypothetical protein BCE_3022 6 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42783948 Pathogen - hypothetical protein BCE_4902 1 None None None 42779379 Common - hypothetical protein BCE_0298 25 COG3754 RgpF, Lipopolysaccharide biosynthesis protein Cell envelope biogenesis, outer membrane 42783866 Common - aminopeptidase, putative BCE_4820 64 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 42779564 Common - hypothetical protein BCE_0484 53 COG1511 COG1511, Predicted membrane protein Function unknown 42779663 Common - ABC transporter, ATP-binding/permease protein BCE_0583 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42781802 Common - hypothetical protein BCE_2745 14 COG4815 COG4815, Uncharacterized protein conserved in bacteria Function unknown 42783759 Pathogen - hypothetical protein BCE_4713 1 None None None 42784123 Pathogen - hypothetical protein BCE_5077 1 None None None 42780467 Common sinR transcriptional regulator SinR BCE_1393 70 COG1396 HipB, Predicted transcriptional regulators Transcription 42780863 Common flhF flagellar biosynthesis regulator FlhF BCE_1791 247 COG1419 FlhF, Flagellar GTP-binding protein Cell motility and secretion 42779161 Common - ATP:guanido phosphotransferase BCE_0080 25 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 42781572 Common - transcriptional regulator, TetR family BCE_2510 138 COG1309 AcrR, Transcriptional regulator Transcription 42780540 Common - hypothetical protein BCE_1466 2 None None None 42781403 Common - protein kinase domain protein BCE_2340 132 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 42782553 Common pepF oligoendopeptidase F BCE_3502 87 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42781502 Common - hydrolase, putative BCE_2440 134 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42782800 Pathogen - hypothetical protein BCE_3750 1 None None None 42781331 Common dfrA dihydrofolate reductase BCE_2267 147 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 42783297 Common ispA geranyltranstransferase BCE_4251 242 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 42783925 Common - hypothetical protein BCE_4879 11 COG4696 COG4696, Uncharacterized protein conserved in bacteria Function unknown 42784248 Common - hypothetical protein BCE_5202 56 COG2910 COG2910, Putative NADH-flavin reductase General function prediction only 42784643 Common - DNA recombinase, putative BCE_5598 130 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42782578 Common - hypothetical protein BCE_3527 39 COG2320 GrpB, Uncharacterized conserved protein Function unknown 42783731 Common asnC asparaginyl-tRNA synthetase BCE_4685 249 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 42779136 Common - S4 domain protein BCE_0055 67 COG1188 COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) Translation, ribosomal structure and biogenesis 42779140 Common - hypothetical protein BCE_0059 237 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 42781918 Common dapA dihydrodipicolinate synthase BCE_2861 235 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 42783627 Pathogen - hypothetical protein BCE_4581 1 None None None 42784022 Common - bmrU protein BCE_4976 119 COG1597 LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase Lipid metabolism / General function prediction only 42781412 Pathogen - hypothetical protein BCE_2349 1 None None None 42783389 Common glcK glucokinase BCE_4343 168 COG1940 NagC, Transcriptional regulator/sugar kinase Transcription / Carbohydrate transport and metabolism 42779394 Common - hypothetical protein BCE_0313 7 None None None 42783895 Common - polysaccharide biosynthesis family protein BCE_4849 32 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42781550 Pathogen - hypothetical protein BCE_2488 1 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 42783062 Common - hypothetical protein BCE_4015 2 None None None 42782580 Common - bile acid transporter family protein BCE_3529 74 COG0385 COG0385, Predicted Na+-dependent transporter General function prediction only 42779198 Common rplP 50S ribosomal protein L16 BCE_0117 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 42781875 Common - glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein, putative BCE_2818 62 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 42779238 Common glmM phosphoglucosamine mutase BCE_0157 243 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 42781105 Pathogen - hypothetical protein BCE_2036 1 None None None 42780276 Common - wall associated protein, putative BCE_1201 80 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 42782990 Common - S4 domain protein BCE_3942 31 COG2302 COG2302, Uncharacterized conserved protein, contains S4-like domain Function unknown 42780369 Common - hypothetical protein BCE_1295 4 COG5504 COG5504, Predicted Zn-dependent protease Posttranslational modification, protein turnover, chaperones 42781321 Common - acetyltransferase, GNAT family BCE_2257 35 COG0456 RimI, Acetyltransferases General function prediction only 42781754 Common cypA cytochrome p450 BCE_2696 91 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 42779285 Pathogen - hypothetical protein BCE_0204 1 None None None 42782867 Common - hypothetical protein BCE_3817 62 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 42781734 Common - DNA-binding response regulator BCE_2675 216 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42779850 Common qoxA quinol oxidase, subunit II BCE_0772 154 COG1622 CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 Energy production and conversion 42781822 Common - fosfomycin resistance protein BCE_2765 10 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42781632 Common - neutral protease A, Bacillolysin BCE_2571 52 COG3227 LasB, Zinc metalloprotease (elastase) Amino acid transport and metabolism 42780257 Common - hypothetical protein BCE_1182 13 COG3860 COG3860, Uncharacterized protein conserved in bacteria Function unknown 42783385 Common - transcriptional regulator, ArsR family BCE_4339 112 COG4189 COG4189, Predicted transcriptional regulator Transcription 42780225 Common - hypothetical protein BCE_1150 4 COG4980 GvpP, Gas vesicle protein General function prediction only 42782241 Common - drug transport protein, putative BCE_3186 228 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42780505 Common - hypothetical protein BCE_1431 118 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 42783795 Pathogen - lipoprotein, putative BCE_4749 1 None None None 42783973 Common - sensor histidine kinase BCE_4927 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42782564 Common - hypothetical protein BCE_3513 2 COG1434 COG1434, Uncharacterized conserved protein Function unknown 42779231 Common - polysaccharide deacetylase, putative BCE_0150 110 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42779436 Common - sensory box sigma-54 dependent DNA-binding response regulator BCE_0355 172 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 42780587 Common - hypothetical protein BCE_1513 7 None None None 42779200 Common rpsQ 30S ribosomal protein S17 BCE_0119 230 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 42782756 Pathogen - hypothetical protein BCE_3706 1 None None None 42779103 Common recR recombination protein RecR BCE_0022 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 42779184 Common rpoC DNA-directed RNA polymerase subunit beta' BCE_0103 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 42779859 Pathogen - hypothetical protein BCE_0781 1 None None None 42781672 Pathogen - hypothetical protein BCE_2612 1 None None None 42783221 Common - hypothetical protein BCE_4175 46 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 42780340 Pathogen - hypothetical protein BCE_1266 1 None None None 42782172 Common - hypothetical protein BCE_3117 28 COG3817 COG3817, Predicted membrane protein Function unknown 42780089 Common - hypothetical protein BCE_1013 15 COG3972 COG3972, Superfamily I DNA and RNA helicases General function prediction only 42781818 Common - pullulanase, putative BCE_2761 155 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 42783970 Pathogen - hypothetical protein BCE_4924 1 None None None 42780620 Common cysC adenylylsulfate kinase BCE_1546 145 COG0529 CysC, Adenylylsulfate kinase and related kinases Inorganic ion transport and metabolism 42780938 Common - hypothetical protein BCE_1868 6 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 42782601 Pathogen - hypothetical protein BCE_3551 1 None None None 42779848 Common qoxC quinol oxidase, subunit III BCE_0770 148 COG1845 CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 Energy production and conversion 42780639 Common brnQ branched-chain amino acid transport system II carrier protein BCE_1565 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 42781948 Common - sensor histidine kinase SrrB, putative BCE_2892 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42783173 Pathogen - conserved hypothetical protein subfamily BCE_4126 1 None None None 42783823 Common - hypothetical protein BCE_4777 6 None None None 42781582 Common gpm phosphoglyceromutase BCE_2520 162 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 42783849 Common acuB acetoin utilization protein AcuB BCE_4803 122 COG3448 COG3448, CBS-domain-containing membrane protein Signal transduction mechanisms 42783172 Common scpA segregation and condensation protein A BCE_4125 152 COG1354 COG1354, Uncharacterized conserved protein Function unknown 42782460 Common gntK gluconate kinase BCE_3407 185 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 42780364 Common - hypothetical protein BCE_1290 2 COG2267 PldB, Lysophospholipase Lipid metabolism 42784386 Common thiC thiamine biosynthesis protein ThiC BCE_5341 190 COG0422 ThiC, Thiamine biosynthesis protein ThiC Coenzyme metabolism 42781770 Common - Protein, related to divalent cations, tolerance CutA family BCE_2713 49 COG3323 COG3323, Uncharacterized protein conserved in bacteria Function unknown 42781035 Common - hypothetical protein BCE_1966 49 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42783355 Pathogen - hypothetical protein BCE_4309 1 None None None 42781690 Pathogen - hypothetical protein BCE_2631 1 None None None 42784288 Common gap glyceraldehyde-3-phosphate dehydrogenase BCE_5242 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 42783428 Common dgkA diacylglycerol kinase BCE_4382 57 COG0818 DgkA, Diacylglycerol kinase Cell envelope biogenesis, outer membrane 42781637 Common - excinuclease ABC, A subunit-related protein BCE_2576 230 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 42782908 Pathogen - hypothetical protein BCE_3858 1 None None None 42779215 Common rpmJ 50S ribosomal protein L36 BCE_0134 136 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 42780585 Common - hypothetical protein BCE_1511 19 COG3874 COG3874, Uncharacterized conserved protein Function unknown 42779395 Common - hypothetical protein BCE_0314 188 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42783418 Common sigA RNA polymerase sigma factor RpoD BCE_4372 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 42781713 Common cypA cytochrome P450 BCE_2654 89 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 42782415 Common - hydrolase, haloacid dehalogenase-like family BCE_3362 88 COG1011 COG1011, Predicted hydrolase (HAD superfamily) General function prediction only 42784660 Common yycF DNA-binding response regulator YycF BCE_5615 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42780402 Common - bacteriocin O-metyltransferase, putative BCE_1328 23 None None None 42782446 Common - transcriptional regulator, putative BCE_3393 40 COG0789 SoxR, Predicted transcriptional regulators Transcription 42781239 Pathogen - hypothetical protein BCE_2173 1 None None None 42782283 Common - transcriptional regulator, TetR family BCE_3228 92 COG1309 AcrR, Transcriptional regulator Transcription 42781166 Common - oxidoreductase, aldo/keto reductase family BCE_2100 186 COG4989 COG4989, Predicted oxidoreductase General function prediction only 42780733 Pathogen - hypothetical protein BCE_1659 1 None None None 42784449 Common mbl mbl protein BCE_5404 236 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 42784513 Common ctrA CTP synthetase BCE_5468 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 42779284 Pathogen - lipoprotein, putative BCE_0203 1 None None None 42779422 Common - ABC transporter, ATP-binding protein BCE_0341 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 42781640 Common - penicillin-binding protein, putative BCE_2579 152 COG1680 AmpC, Beta-lactamase class C and other penicillin binding proteins Defense mechanisms 42783652 Pathogen - hypothetical protein BCE_4606 1 None None None 42779882 Pathogen - hypothetical protein BCE_0805 1 None None None 42780521 Common - hypothetical protein BCE_1447 65 COG2861 COG2861, Uncharacterized protein conserved in bacteria Function unknown 42780488 Common - sensor histidine kinase BCE_1414 223 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42784381 Common - hypothetical protein BCE_5336 6 None None None 42783167 Common - transcriptional regulator, GntR family BCE_4120 147 COG2188 PhnF, Transcriptional regulators Transcription 42781930 Common - hypothetical protein BCE_2874 2 None None None 42781230 Common - hypothetical protein BCE_2164 64 COG4106 Tam, Trans-aconitate methyltransferase General function prediction only 42783121 Pathogen - hypothetical protein BCE_4074 1 None None None 42784085 Common yugI general stress protein 13 BCE_5039 229 COG1098 VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) Translation, ribosomal structure and biogenesis 42779328 Common - oligopeptide ABC transporter, substrate-binding protein, putative BCE_0247 213 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 42779889 Common kdpD sensor histidine kinase KdpD BCE_0812 92 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 42779339 Pathogen - hypothetical protein BCE_0258 1 None None None 42782382 Pathogen - hypothetical protein BCE_3329 1 COG4296 COG4296, Uncharacterized protein conserved in bacteria Function unknown 42783491 Common - acetyltransferase, GNAT family BCE_4445 8 COG2153 ElaA, Predicted acyltransferase General function prediction only 42784099 Common glyS glycyl-tRNA synthetase BCE_5053 87 COG0423 GRS1, Glycyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 42784595 Pathogen - hypothetical protein BCE_5550 1 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 42781374 Common - azoreductase BCE_2310 29 COG0431 COG0431, Predicted flavoprotein General function prediction only 42779630 Common - hypothetical protein BCE_0550 12 COG1971 COG1971, Predicted membrane protein Function unknown 42782582 Common - acetyltransferase, GNAT family family BCE_3531 20 COG0456 RimI, Acetyltransferases General function prediction only 42780839 Common fliF flagellar MS-ring protein BCE_1766 115 COG1766 FliF, Flagellar biosynthesis/type III secretory pathway lipoprotein Cell motility and secretion / Intracellular trafficking and secretion 42779825 Common - oxidoreductase, FAD-binding BCE_0747 34 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 42781489 Common - zinc transporter family protein BCE_2427 17 COG0428 COG0428, Predicted divalent heavy-metal cations transporter Inorganic ion transport and metabolism 42780269 Pathogen - hypothetical protein BCE_1194 1 None None None 42779517 Common amhX amidohydrolase amhX BCE_0436 171 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 42783549 Common queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase BCE_4503 183 COG0809 QueA, S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) Translation, ribosomal structure and biogenesis 42780046 Common secA translocase BCE_0970 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 42782102 Common - acetyltransferase, GNAT family BCE_3046 169 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42781926 Pathogen - hypothetical protein BCE_2870 1 COG4395 COG4395, Uncharacterized protein conserved in bacteria Function unknown 42781329 Common - rhamnosidase A BCE_2265 22 None None None 42783874 Common - 30S ribosomal protein S14 homolog-related BCE_4828 69 COG1695 COG1695, Predicted transcriptional regulators Transcription 42784509 Pathogen - hypothetical protein BCE_5464 1 None None None 42781423 Pathogen - hypothetical protein BCE_2360 1 None None None 42782769 Pathogen - hypothetical protein BCE_3719 1 None None None 42783796 Common - hypothetical protein BCE_4750 12 None None None 42779400 Common purB adenylosuccinate lyase BCE_0319 240 COG0015 PurB, Adenylosuccinate lyase Nucleotide transport and metabolism 42783809 Pathogen - hypothetical protein BCE_4763 1 None None None 42783619 Pathogen - hypothetical protein BCE_4573 1 None None None 42779643 Common pfl formate acetyltransferase BCE_0563 59 COG1882 PflD, Pyruvate-formate lyase Energy production and conversion 42780039 Pathogen - hypothetical protein BCE_0963 1 None None None 42781012 Common - major facilitator family transporter BCE_1943 190 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783714 Common - iron compound ABC transporter, ATP-binding protein BCE_4668 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 42784432 Common - glycosyl transferase, group 2 family protein BCE_5387 211 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42784290 Common - glutaredoxin family protein BCE_5244 8 COG0695 GrxC, Glutaredoxin and related proteins Posttranslational modification, protein turnover, chaperones 42779606 Common - hypothetical protein BCE_0526 3 COG3714 COG3714, Predicted membrane protein Function unknown 42783736 Common - HD domain protein BCE_4690 3 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 42783846 Pathogen - hypothetical protein BCE_4800 1 None None None 42780209 Common - cell division protein, FtsW/RodA/SpoVE family BCE_1133 196 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 42780882 Common - ABC transporter, ATP-binding protein BCE_1811 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 42780964 Pathogen - hypothetical protein BCE_1895 1 None None None 42782668 Common - CoA binding domain family protein BCE_3618 135 COG1832 COG1832, Predicted CoA-binding protein General function prediction only 42784517 Common - acyl-CoA dehydrogenase BCE_5472 163 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 42780095 Common - type III restriction-modification system enzyme, R subunit BCE_1019 39 COG3587 COG3587, Restriction endonuclease Defense mechanisms 42783716 Common - iron compound ABC transporter, iron compound-binding protein BCE_4670 90 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 42781851 Common - acetoin operon transcriptional activator, putative BCE_2794 178 COG3284 AcoR, Transcriptional activator of acetoin/glycerol metabolism Secondary metabolites biosynthesis, transport, and catabolism / Transcription 42780722 Common - hypothetical protein BCE_1648 3 None None None 42780618 Common cysH phosphoadenosine phosphosulfate reductase BCE_1544 167 COG0175 CysH, 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes Amino acid transport and metabolism / Coenzyme metabolism 42779176 Common secE preprotein translocase subunit SecE BCE_0095 2 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 42782535 Common - acetyltransferase, GNAT family BCE_3484 97 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42779731 Common - acetyltransferase, GNAT family BCE_0653 65 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42780937 Common - hypothetical protein BCE_1867 94 COG0842 COG0842, ABC-type multidrug transport system, permease component Defense mechanisms 42784482 Common atpI ATP synthase protein I BCE_5437 3 None None None 42780308 Pathogen - hypothetical protein BCE_1233 1 None None None 42781985 Common - methlytransferase, UbiE/COQ5 family BCE_2929 175 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42780640 Pathogen - hypothetical protein BCE_1566 1 None None None 42779619 Common fumA fumarate hydratase, class I BCE_0539 148 COG1951 TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain Energy production and conversion 42784427 Common - hypothetical protein BCE_5382 2 None None None 42780145 Pathogen - dihydroxyacetone kinase, degenerate BCE_1069 2 None None None 42781777 Common dnaN DNA polymerase III subunit beta BCE_2720 214 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 42783983 Common - ABC transporter, permease protein BCE_4937 163 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 42781189 Common - cardiolipin synthetase domain protein BCE_2123 151 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 42783244 Pathogen - hypothetical protein BCE_4198 2 COG3216 COG3216, Uncharacterized protein conserved in bacteria Function unknown 42781301 Common argS arginyl-tRNA synthetase BCE_2236 246 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42782705 Pathogen - hypothetical protein BCE_3655 1 COG3237 COG3237, Uncharacterized protein conserved in bacteria Function unknown 42783300 Common folD methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase BCE_4254 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 42782450 Common - methyltransferase, putative BCE_3397 49 None None None 42781560 Common anmK anhydro-N-acetylmuramic acid kinase BCE_2498 120 COG2377 COG2377, Predicted molecular chaperone distantly related to HSP70-fold metalloproteases Posttranslational modification, protein turnover, chaperones 42781589 Common pepD aminoacyl-histidine dipeptidase BCE_2527 55 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 42781004 Common - acetolactate synthase 1 regulatory subunit BCE_1935 134 COG0440 IlvH, Acetolactate synthase, small (regulatory) subunit Amino acid transport and metabolism 42784518 Common - acyl-CoA dehydrogenase BCE_5473 168 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 42781745 Common - degV family protein BCE_2687 32 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 42779841 Common - xanthine/uracil permease family protein BCE_0763 135 COG2252 COG2252, Permeases General function prediction only 42781845 Common - transcriptional regulator, TetR family BCE_2788 50 COG1309 AcrR, Transcriptional regulator Transcription 42782109 Common - hypothetical protein BCE_3053 181 COG0714 COG0714, MoxR-like ATPases General function prediction only 42781914 Common - hypothetical protein BCE_2857 39 COG1162 COG1162, Predicted GTPases General function prediction only 42783159 Common - nitroreductase family protein BCE_4112 72 COG0778 NfnB, Nitroreductase Energy production and conversion 42784420 Common - phosphoglycerate transporter family protein BCE_5375 143 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 42782390 Pathogen - lipoprotein, putative BCE_3337 1 None None None 42781242 Common - acetyltransferase, GNAT family BCE_2176 79 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42784461 Common nuoM NADH dehydrogenase subunit M BCE_5416 210 COG1008 NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) Energy production and conversion 42779608 Common SpaseI signal peptidase I S BCE_0528 153 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 42780476 Common - PAP2 family protein BCE_1402 102 COG0671 PgpB, Membrane-associated phospholipid phosphatase Lipid metabolism 42780070 Common - proline racemase, putative BCE_0994 47 COG3938 COG3938, Proline racemase Amino acid transport and metabolism 42784172 Common - hypothetical protein BCE_5126 2 None None None 42780815 Pathogen - hypothetical protein BCE_1742 1 None None None 42783647 Pathogen - hypothetical protein BCE_4601 1 None None None 42780730 Common - neutral zinc metallopeptidase, putative BCE_1656 42 COG2738 COG2738, Predicted Zn-dependent protease General function prediction only 42780775 Common - hypothetical protein BCE_1701 34 COG1159 Era, GTPase General function prediction only 42781046 Common pyn pyrimidine-nucleoside phosphorylase BCE_1977 118 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 42780316 Common - hypothetical protein BCE_1242 70 COG0398 COG0398, Uncharacterized conserved protein Function unknown 42780385 Common mecA adaptor protein BCE_1311 13 COG4862 MecA, Negative regulator of genetic competence, sporulation and motility Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion 42779388 Pathogen - hypothetical protein BCE_0307 1 None None None 42784613 Common - transporter, AcrB/AcrD/AcrF family BCE_5568 180 COG0841 AcrB, Cation/multidrug efflux pump Defense mechanisms 42780751 Common - hypothetical protein BCE_1677 2 None None None 42780705 Common engA GTP-binding protein EngA BCE_1631 221 COG1160 COG1160, Predicted GTPases General function prediction only 42782396 Common - hypothetical protein BCE_3343 50 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42783800 Common - acetyltransferase, GNAT family BCE_4754 5 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42779642 Common - glycosyl transferase, group 2 family protein BCE_0562 93 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42783858 Common - hypothetical protein BCE_4812 3 None None None 42784076 Common - spore coat-associated protein BCE_5030 2 None None None 42782376 Common - ABC transporter, ATP-binding protein BCE_3323 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 42779671 Common bcP bacterioferritin comigratory protein BCE_0591 227 COG1225 Bcp, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 42780568 Pathogen - hypothetical protein BCE_1494 1 None None None 42781531 Common - transcriptional regulator, LysR family BCE_2469 193 COG0583 LysR, Transcriptional regulator Transcription 42784553 Common - HD domain protein BCE_5508 87 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 42780029 Common - hypothetical protein BCE_0953 18 COG3679 COG3679, Uncharacterized conserved protein Function unknown 42781674 Pathogen - hypothetical protein BCE_2615 1 None None None 42784266 Common speG spermidine N1-acetyltransferase BCE_5220 97 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42781195 Pathogen - hypothetical protein BCE_2129 1 None None None 42782294 Common cypD bifunctional P-450:NADPH-P450 reductase 1 BCE_3239 129 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 42784599 Common - cytosolic long-chain acyl-CoA thioester hydrolase family protein BCE_5554 122 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 42782153 Common - hypothetical protein BCE_3097 11 None None None 42779753 Common - glyoxylase family protein BCE_0675 42 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42780100 Pathogen - hypothetical protein BCE_1024 1 None None None 42784630 Common - Predicted membrane protein, putative BCE_5585 8 COG4878 COG4878, Uncharacterized protein conserved in bacteria Function unknown 42779247 Pathogen - hypothetical protein BCE_0166 1 None None None 42782399 Common - pfs protein, putative BCE_3346 11 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 42784030 Common - ABC transporter, permease protein BCE_4984 19 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42784113 Common - transporter, putative BCE_5067 123 COG2270 COG2270, Permeases of the major facilitator superfamily General function prediction only 42779743 Common - transcriptional regulator/TPR domain protein BCE_0665 20 COG3063 PilF, Tfp pilus assembly protein PilF Cell motility and secretion / Intracellular trafficking and secretion 42782645 Pathogen - hypothetical protein BCE_3595 1 None None None 42781520 Common - transposase, IS4 family BCE_2458 51 COG3666 COG3666, Transposase and inactivated derivatives DNA replication, recombination, and repair 42784363 Common celF 6-phospho-beta-glucosidase BCE_5318 54 COG1486 CelF, Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases Carbohydrate transport and metabolism 42779914 Common - hypothetical protein BCE_0838 13 None None None 42779798 Common - lipoprotein, putative BCE_0720 6 COG2247 LytB, Putative cell wall-binding domain Cell envelope biogenesis, outer membrane 42780530 Pathogen - hypothetical protein BCE_1456 1 None None None 42779811 Common rbsK ribokinase BCE_0733 205 COG0524 RbsK, Sugar kinases, ribokinase family Carbohydrate transport and metabolism 42783635 Common racE glutamate racemase BCE_4589 191 COG0796 MurI, Glutamate racemase Cell envelope biogenesis, outer membrane 42782402 Pathogen - hypothetical protein BCE_3349 1 None None None 42784538 Common argS arginyl-tRNA synthetase BCE_5493 249 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42780905 Common - transporter, EamA family BCE_1835 79 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42780327 Common - hypothetical protein BCE_1253 2 None None None 42780396 Common - ribosomal large subunit pseudouridine synthase, RluD subfamily BCE_1322 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 42780232 Pathogen - hypothetical protein BCE_1157 1 None None None 42781036 Pathogen - hypothetical protein BCE_1967 1 None None None 42782215 Common - isochorismatase family protein BCE_3160 75 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42782942 Common acpP acyl carrier protein BCE_3892 210 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42783603 Common hemA glutamyl-tRNA reductase BCE_4557 180 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 42783556 Common - hypothetical protein BCE_4510 2 None None None 42779307 Common - transcriptional regulator, LysR family BCE_0226 193 COG0583 LysR, Transcriptional regulator Transcription 42784607 Pathogen - hypothetical protein BCE_5562 1 None None None 42779108 Common cad lysine decarboxylase BCE_0027 93 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 42784339 Common prfB peptide chain release factor 2 BCE_5293 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 42784452 Common - stage II sporulation protein BCE_5407 135 COG0739 NlpD, Membrane proteins related to metalloendopeptidases Cell envelope biogenesis, outer membrane 42780406 Common - hypothetical protein BCE_1332 103 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 42781395 Common - acetyltransferase, GNAT family BCE_2332 19 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 42782771 Common - phosphonate ABC transporter, permease protein BCE_3721 91 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 42781058 Common - hypothetical protein BCE_1989 7 None None None 42779576 Pathogen - hypothetical protein BCE_0496 1 None None None 42782980 Common carA carbamoyl phosphate synthase small subunit BCE_3932 235 COG0505 CarA, Carbamoylphosphate synthase small subunit Amino acid transport and metabolism / Nucleotide transport and metabolism 42782713 Common ureB urease subunit beta BCE_3663 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 42780862 Common flhA flagellar biosynthesis protein A BCE_1790 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 42783880 Common - tRNA binding domain protein, putative BCE_4834 209 COG0073 ARC1, EMAP domain General function prediction only 42782835 Common - hydrolase, putative BCE_3785 17 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42782159 Common - acetyltransferase, GNAT family BCE_3103 85 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782593 Common - hypothetical protein BCE_3543 5 None None None 42782061 Common - hypothetical protein BCE_3005 23 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 42783887 Common trmB tRNA (guanine-N(7))-methyltransferase BCE_4841 178 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 42784013 Common - hypothetical protein BCE_4967 13 COG3859 COG3859, Predicted membrane protein Function unknown 42783516 Common - hypothetical protein BCE_4470 24 COG4472 COG4472, Uncharacterized protein conserved in bacteria Function unknown 42781568 Common - metallo-beta-lactamase family protein BCE_2506 24 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42784541 Common - hypothetical protein BCE_5496 3 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42781485 Common - ABC transporter, permease protein, putative BCE_2423 94 COG2211 MelB, Na+/melibiose symporter and related transporters Carbohydrate transport and metabolism 42782191 Common - transcriptional regulator, TetR family BCE_3136 32 COG1309 AcrR, Transcriptional regulator Transcription 42783088 Common - Ser/Thr protein phosphatase family protein BCE_4041 107 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 42782134 Common - response regulator, putative BCE_3078 3 None None None 42783785 Pathogen - hypothetical protein BCE_4739 1 None None None 42784670 Common rpsF 30S ribosomal protein S6 BCE_5625 208 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 42782672 Common - anaerobic ribonucleoside triphosphate reductase BCE_3622 97 COG1328 NrdD, Oxygen-sensitive ribonucleoside-triphosphate reductase Nucleotide transport and metabolism 42781596 Pathogen - hypothetical protein BCE_2535 1 None None None 42780349 Common - wall-associated protein, putative BCE_1275 83 COG3209 RhsA, Rhs family protein Cell envelope biogenesis, outer membrane 42781465 Common dhbF nonribosomal peptide synthetase DhbF BCE_2402 222 COG1020 EntF, Non-ribosomal peptide synthetase modules and related proteins Secondary metabolites biosynthesis, transport, and catabolism 42780211 Common - hypothetical protein BCE_1135 91 COG3973 COG3973, Superfamily I DNA and RNA helicases General function prediction only 42780460 Pathogen - hypothetical protein BCE_1386 1 None None None 42782044 Common - ABC transporter, ATP-binding protein BCE_2988 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 42784314 Common - hypothetical protein BCE_5268 63 COG1950 COG1950, Predicted membrane protein Function unknown 42780900 Common - hypothetical protein BCE_1830 3 None None None 42782347 Common - DnaD domain protein BCE_3294 7 COG3935 DnaD, Putative primosome component and related proteins DNA replication, recombination, and repair 42780606 Common hisE phosphoribosyl-ATP pyrophosphatase BCE_1532 179 COG0140 HisI, Phosphoribosyl-ATP pyrophosphohydrolase Amino acid transport and metabolism 42781858 Common acoL dihydrolipoamide dehydrogenase BCE_2801 244 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 42781903 Pathogen - hypothetical protein BCE_2846 1 None None None 42784208 Pathogen - hypothetical protein BCE_5162 1 None None None 42783150 Common mtnW 2,3-diketo-5-methylthiopentyl-1-phosphate enolase BCE_4103 65 COG1850 RbcL, Ribulose 1,5-bisphosphate carboxylase, large subunit Carbohydrate transport and metabolism 42780192 Common - glyoxylase family protein BCE_1116 36 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42783323 Common - manganese transport transcriptional regulator BCE_4277 100 COG1321 TroR, Mn-dependent transcriptional regulator Transcription 42782726 Common - transcriptional regulator, CarD family BCE_3676 80 COG1329 COG1329, Transcriptional regulators, similar to M. xanthus CarD Transcription 42779525 Common fucA L-fuculose phosphate aldolase BCE_0444 156 COG0235 AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Carbohydrate transport and metabolism 42779323 Pathogen - hypothetical protein BCE_0242 1 None None None 42781771 Common - mutT/nudix family protein BCE_2714 33 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42780661 Common - sensor histidine kinase BCE_1587 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42782517 Common - metallo-beta-lactamase family protein BCE_3466 63 COG0491 GloB, Zn-dependent hydrolases, including glyoxylases General function prediction only 42784169 Common - ABC transporter, substrate-binding protein, putative BCE_5123 100 COG1464 NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen Inorganic ion transport and metabolism 42780782 Pathogen - hypothetical protein BCE_1708 1 None None None 42783043 Common - cell division protein,FtsW/RodA/SpoVE family BCE_3995 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 42782015 Common - sulfonate ABC transporter, permease protein, putative BCE_2959 151 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 42779121 Common - yabG protein BCE_0040 11 None None None 42779372 Common guaA bifunctional GMP synthase/glutamine amidotransferase protein BCE_0291 240 COG0519 GuaA, GMP synthase, PP-ATPase domain/subunit Nucleotide transport and metabolism 42780529 Common kinB sporulation kinase B BCE_1455 214 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42784460 Common nuoN NADH dehydrogenase subunit N BCE_5415 209 COG1007 NuoN, NADH:ubiquinone oxidoreductase subunit 2 (chain N) Energy production and conversion 42782717 Common - hypothetical protein BCE_3667 3 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 42779542 Common - hypothetical protein BCE_0462 10 COG1618 COG1618, Predicted nucleotide kinase Nucleotide transport and metabolism 42782589 Common - microbial collagenase, putative BCE_3539 44 COG3291 COG3291, FOG: PKD repeat General function prediction only 42781792 Pathogen - hypothetical protein BCE_2735 1 None None None 42782254 Common - transposase, IS605 family BCE_3199 67 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42780656 Pathogen - hypothetical protein BCE_1582 1 None None None 42779347 Common murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase BCE_0266 213 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 42781686 Common - transcriptional regulator, GntR family BCE_2627 216 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42782344 Common - Response regulator receiver domain protein BCE_3291 220 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42779361 Common - hypothetical protein BCE_0280 201 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 42782965 Common - cation-transporting ATPase, E1-E2 family BCE_3917 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 42780200 Common glpF glycerol uptake facilitator protein BCE_1124 129 COG0580 GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) Carbohydrate transport and metabolism 42779582 Pathogen - hypothetical protein BCE_0502 1 None None None 42779958 Common celC PTS system, cellobiose-specific IIA component BCE_0882 32 COG1447 CelC, Phosphotransferase system cellobiose-specific component IIA Carbohydrate transport and metabolism 42782053 Common aroF chorismate synthase BCE_2997 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 42782367 Common - thiol-activated cytolysin BCE_3314 7 None None None 42779966 Common - hypothetical protein BCE_0890 144 COG0845 AcrA, Membrane-fusion protein Cell envelope biogenesis, outer membrane 42783863 Common - hypothetical protein BCE_4817 8 None None None 42784602 Common - hypothetical protein BCE_5557 106 COG1216 COG1216, Predicted glycosyltransferases General function prediction only 42783695 Common etfA electron transfer flavoprotein, alpha subunit BCE_4649 153 COG2025 FixB, Electron transfer flavoprotein, alpha subunit Energy production and conversion 42782872 Common - hypothetical protein BCE_3822 119 COG0612 PqqL, Predicted Zn-dependent peptidases General function prediction only 42782086 Pathogen - hypothetical protein BCE_3030 1 None None None 42781277 Common galM aldose 1-epimerase BCE_2212 88 COG2017 GalM, Galactose mutarotase and related enzymes Carbohydrate transport and metabolism 42782894 Common - polysaccharide deacetylase, putative BCE_3844 113 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42783280 Common bfmbAa 3-methyl-2-oxobutanoate dehydrogenase, alpha subunit BCE_4234 159 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 161511017 Common hprK HPr kinase/phosphorylase BCE_5267 79 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 42784545 Common speE spermidine synthase BCE_5500 118 COG0421 SpeE, Spermidine synthase Amino acid transport and metabolism 42780068 Pathogen - hypothetical protein BCE_0992 1 None None None 42781442 Pathogen - hypothetical protein BCE_2379 1 None None None 42782316 Common - D-cysteine desulfhydrase BCE_3261 72 COG2515 Acd, 1-aminocyclopropane-1-carboxylate deaminase Amino acid transport and metabolism 42782740 Common - conserved repeat domain protein BCE_3690 77 COG1361 COG1361, S-layer domain Cell envelope biogenesis, outer membrane 42779527 Pathogen - hypothetical protein BCE_0446 1 None None None 42783767 Pathogen - hypothetical protein BCE_4721 1 None None None 42779297 Common - oxidoreductase, aldo/keto reductase family BCE_0216 189 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 42783184 Common spoVAB stage V sporulation protein AB BCE_4138 4 None None None 42784388 Pathogen - hypothetical protein BCE_5343 1 None None None 42780113 Pathogen - protein-export membrane protein-related protein BCE_1037 1 None None None 42781077 Common - amine oxidase, flavin-containing BCE_2008 55 COG1231 COG1231, Monoamine oxidase Amino acid transport and metabolism 42782972 Pathogen - hypothetical protein BCE_3924 1 None None None 42783285 Common - sensory box sigma-54 dependent DNA-binding response regulator BCE_4239 189 COG3829 RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains Transcription / Signal transduction mechanisms 42783676 Common - hypothetical protein BCE_4630 35 COG1983 PspC, Putative stress-responsive transcriptional regulator Transcription / Signal transduction mechanisms 42783773 Common - hypothetical protein BCE_4727 102 COG0628 PerM, Predicted permease General function prediction only 42781764 Common - hypothetical protein BCE_2706 3 None None None 42782184 Common - acetyltransferase, GNAT family BCE_3129 106 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780853 Common - flagellin BCE_1780 120 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 42781201 Common csaA chaperone CsaA BCE_2135 158 COG0073 ARC1, EMAP domain General function prediction only 42781308 Pathogen - hypothetical protein BCE_2243 1 None None None 42783051 Common typA GTP-binding protein TypA BCE_4003 249 COG1217 TypA, Predicted membrane GTPase involved in stress response Signal transduction mechanisms 42781324 Pathogen - hypothetical protein BCE_2260 1 None None None 42783937 Common - hypothetical protein BCE_4891 2 None None None 42779941 Common - hypothetical protein BCE_0865 87 COG1937 COG1937, Uncharacterized protein conserved in bacteria Function unknown 42783208 Common - acetyltransferase, GNAT family BCE_4162 61 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782098 Common - CAAX amino terminal protease family protein BCE_3042 9 COG4377 COG4377, Predicted membrane protein Function unknown 42781385 Common racA polar chromosome segregation protein BCE_2321 3 COG3280 TreY, Maltooligosyl trehalose synthase Carbohydrate transport and metabolism 42781215 Common - IclR family transcriptional regulator, putative BCE_2149 121 COG1414 IclR, Transcriptional regulator Transcription 42784054 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_5008 34 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42782969 Common - proline dipeptidase, putative BCE_3921 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 161511024 Common rpmF 50S ribosomal protein L32 BCE_3969 34 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 42779895 Common - short chain dehydrogenase BCE_0818 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42780932 Pathogen - hypothetical protein BCE_1862 1 None None None 42783447 Common - hypothetical protein BCE_4401 1 None None None 42783203 Common - hypothetical protein BCE_4157 3 None None None 42782587 Common - acetyltransferase, GNAT family BCE_3536 89 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782886 Common - dihydrodipicolinate synthase, putative BCE_3836 234 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 42784496 Common - hypothetical protein BCE_5451 65 COG1971 COG1971, Predicted membrane protein Function unknown 42780687 Common - Ser/Thr protein phosphatase family BCE_1613 87 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 42780852 Common - flagellin BCE_1779 106 COG1344 FlgL, Flagellin and related hook-associated proteins Cell motility and secretion 42783816 Common - hypothetical protein BCE_4770 4 None None None 42783178 Common - peptidyl-prolyl cis-trans isomerase, cyclophilin-type BCE_4131 195 COG0652 PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family Posttranslational modification, protein turnover, chaperones 42784084 Common - hypothetical protein BCE_5038 22 COG2155 COG2155, Uncharacterized conserved protein Function unknown 42784413 Pathogen - conserved hypothetical protein, authentic frameshift BCE_5368 1 None None None 42780172 Pathogen - hypothetical protein BCE_1096 1 None None None 42780944 Common - response regulator BCE_1875 156 COG4753 COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain Signal transduction mechanisms 42783684 Common - acid phosphatase BCE_4638 29 COG2503 COG2503, Predicted secreted acid phosphatase General function prediction only 42782323 Common - transcriptional regulator, ArsR family BCE_3269 9 COG2345 COG2345, Predicted transcriptional regulator Transcription 42781499 Common - O-methyltransferase domain protein BCE_2437 34 COG3315 COG3315, O-Methyltransferase involved in polyketide biosynthesis Secondary metabolites biosynthesis, transport, and catabolism 42780985 Common - GTP-binding protein BCE_1916 216 COG2262 HflX, GTPases General function prediction only 42782825 Common pepT peptidase T BCE_3775 58 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 42784064 Common - DNA binding protein, DksA/TraR family BCE_5018 111 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 42782236 Common - hypothetical protein BCE_3181 1 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42784521 Common - ferredoxin, 4Fe-4S BCE_5476 104 COG0247 GlpC, Fe-S oxidoreductase Energy production and conversion 161511026 Common prpD 2-methylcitrate dehydratase BCE_2377 59 COG2079 PrpD, Uncharacterized protein involved in propionate catabolism General function prediction only 42784330 Common - hypothetical protein BCE_5284 101 COG0393 COG0393, Uncharacterized conserved protein Function unknown 42781898 Common - btrG family protein BCE_2841 21 COG2105 COG2105, Uncharacterized conserved protein Function unknown 42780671 Common rluB ribosomal large subunit pseudouridine synthase B BCE_1597 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 42779096 Common - deoxynucleoside kinase family protein BCE_0015 40 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 42782091 Common - hypothetical protein BCE_3035 120 COG1690 RtcB, Uncharacterized conserved protein Function unknown 42782566 Common - hypothetical protein BCE_3515 2 None None None 42783662 Pathogen - hypothetical protein BCE_4616 1 None None None 42779698 Common - methyl-accepting chemotaxis protein BCE_0619 150 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42783686 Common - flagellar motor protein MotA BCE_4640 101 COG1291 MotA, Flagellar motor component Cell motility and secretion 42780245 Pathogen - hypothetical protein BCE_1170 1 COG3779 COG3779, Uncharacterized protein conserved in bacteria Function unknown 42782996 Common sigG sporulation sigma factor SigG BCE_3948 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42781536 Common - ABC transporter, ATP-binding/permease protein BCE_2474 248 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42780250 Common blaI penicillinase repressor BCE_1175 38 COG3682 COG3682, Predicted transcriptional regulator Transcription 42783234 Common bioD dithiobiotin synthetase BCE_4188 167 COG0132 BioD, Dethiobiotin synthetase Coenzyme metabolism 42780120 Common - hypothetical protein BCE_1044 2 None None None 42782758 Common - hypothetical protein BCE_3708 45 COG0730 COG0730, Predicted permeases General function prediction only 42783905 Common glcU glucose uptake protein BCE_4859 12 COG4975 GlcU, Putative glucose uptake permease Carbohydrate transport and metabolism 42784267 Common - phosphate-starvation-inducible protein PsiE BCE_5221 21 COG3223 COG3223, Predicted membrane protein Function unknown 42784137 Common - hypothetical protein BCE_5091 22 COG2301 CitE, Citrate lyase beta subunit Carbohydrate transport and metabolism 42784177 Common - hypothetical protein BCE_5131 89 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 42784345 Common comFA comF operon protein 1 BCE_5300 70 COG4098 comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) DNA replication, recombination, and repair 42780890 Common - hypothetical protein BCE_1819 9 COG2140 COG2140, Thermophilic glucose-6-phosphate isomerase and related metalloenzymes Carbohydrate transport and metabolism / General function prediction only 42783264 Pathogen - hypothetical protein BCE_4218 1 None None None 42780077 Common - oligopeptide ABC transporter, permease protein BCE_1001 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42783807 Pathogen - hypothetical protein BCE_4761 1 None None None 42784271 Common - iron compound ABC transporter, permease protein BCE_5225 190 COG4606 CeuB, ABC-type enterochelin transport system, permease component Inorganic ion transport and metabolism 42782822 Common adaA Ada regulatory protein/6-O-methylguanine-DNA methyltransferase BCE_3772 151 COG2169 Ada, Adenosine deaminase Nucleotide transport and metabolism 42779863 Common - phosphate ABC transporter, permease protein, putative BCE_0786 229 COG0581 PstA, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 42784474 Common atpC F0F1 ATP synthase subunit epsilon BCE_5429 172 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 42781543 Common - DNA-binding protein BCE_2481 117 COG1396 HipB, Predicted transcriptional regulators Transcription 42781897 Common - N-methyl-transferase-related protein BCE_2840 5 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 42781133 Common - Small, acid-soluble spore protein, alpha/beta family BCE_2065 11 None None None 42784258 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase BCE_5212 208 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 42784396 Common dat D-amino acid aminotransferase BCE_5351 190 COG0115 IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Amino acid transport and metabolism / Coenzyme metabolism 42783025 Common - methyltransferase, putative BCE_3977 216 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 42780772 Common pbuX xanthine permease BCE_1698 127 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 42782441 Pathogen - lipoprotein, putative BCE_3388 1 None None None 42782634 Common narA molybdenum cofactor biosynthesis protein A BCE_3584 203 COG2896 MoaA, Molybdenum cofactor biosynthesis enzyme Coenzyme metabolism 42782037 Common ulaA ascorbate-specific PTS system enzyme IIC BCE_2981 36 COG3037 SgaT, Uncharacterized protein conserved in bacteria Function unknown 42784622 Common - osmoprotectant transporter, BCCT family BCE_5577 95 COG1292 BetT, Choline-glycine betaine transporter Cell envelope biogenesis, outer membrane 42780676 Common resE sensor histidine kinase ResE BCE_1602 222 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42780792 Common - hypothetical protein BCE_1718 3 None None None 42781529 Pathogen - hypothetical protein BCE_2467 1 None None None 42782278 Pathogen - hypothetical protein BCE_3223 1 None None None 42784155 Common lipA lipoyl synthase BCE_5109 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 42783016 Common - DNA-binding protein, putative BCE_3968 3 None None None 42781619 Common - hypothetical protein BCE_2558 22 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 42783130 Common - transcriptional regulator, PadR family BCE_4083 70 COG1695 COG1695, Predicted transcriptional regulators Transcription 42783501 Common cysM O-acetylserine lyase BCE_4455 219 COG0031 CysK, Cysteine synthase Amino acid transport and metabolism 42781017 Common - acetyl-CoA hydrolase/transferase family protein BCE_1948 96 COG0427 ACH1, Acetyl-CoA hydrolase Energy production and conversion 42779773 Pathogen - hypothetical protein BCE_0695 1 None None None 42783142 Common - amino acid permease BCE_4095 189 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42780924 Common - DNA-binding protein BCE_1854 126 COG1813 COG1813, Predicted transcription factor, homolog of eukaryotic MBF1 Transcription 42781776 Common - mutT/nudix family protein BCE_2719 69 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42783747 Common - transcriptional regulator, TetR family BCE_4701 30 COG1309 AcrR, Transcriptional regulator Transcription 42781115 Common - polysaccharide deacetylase, putative BCE_2047 133 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42782925 Common topA DNA topoisomerase I BCE_3875 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 42780084 Common - alpha-ketoglutarate permease, putative BCE_1008 155 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779337 Pathogen - hypothetical protein BCE_0257 1 None None None 42782255 Pathogen - hypothetical protein BCE_3200 1 None None None 42781705 Pathogen - hypothetical protein BCE_2646 1 None None None 42781995 Common - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative BCE_2939 179 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 42781185 Common - magnesium transporter, CorA family BCE_2119 75 COG0598 CorA, Mg2+ and Co2+ transporters Inorganic ion transport and metabolism 42784351 Common - transcription antiterminator, LytR family BCE_5306 62 COG1316 LytR, Transcriptional regulator Transcription 42781733 Pathogen - hypothetical protein BCE_2674 1 None None None 42783865 Pathogen - hypothetical protein BCE_4819 1 None None None 42783578 Common obgE GTPase ObgE BCE_4532 249 COG0536 Obg, Predicted GTPase General function prediction only 42781722 Common - penicillin-binding protein BCE_2663 200 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42780167 Pathogen - hypothetical protein BCE_1091 1 None None None 42781106 Common - NLP/P60 family protein BCE_2037 119 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 42784279 Common estA carboxylesterase BCE_5233 52 COG1647 COG1647, Esterase/lipase General function prediction only 42781974 Common - hypothetical protein BCE_2918 4 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 42782471 Pathogen - hypothetical protein BCE_3418 1 None None None 42779741 Common - heavy metal-transporting ATPase BCE_0663 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 42784116 Common - hypothetical protein BCE_5070 9 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42783898 Common - transcriptional regulator, ArsR family BCE_4852 98 COG0640 ArsR, Predicted transcriptional regulators Transcription 42782409 Common - hypothetical protein BCE_3356 12 None None None 42781600 Common - beta-lactamase BCE_2539 54 COG2367 PenP, Beta-lactamase class A Defense mechanisms 42779870 Pathogen - hypothetical protein BCE_0793 1 None None None 42782658 Pathogen - hypothetical protein BCE_3608 1 None None None 42782857 Pathogen - hypothetical protein BCE_3807 1 None None None 42780206 Pathogen - hypothetical protein BCE_1130 1 None None None 42784407 Common - hypothetical protein BCE_5362 10 COG4640 COG4640, Predicted membrane protein Function unknown 42784635 Common - channel protein, hemolysin III family BCE_5590 119 COG1272 COG1272, Predicted membrane protein, hemolysin III homolog General function prediction only 42780695 Common - pyridine nucleotide-disulfide oxidoreductase family protein BCE_1621 160 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 42779201 Common rplN 50S ribosomal protein L14 BCE_0120 247 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 42780975 Common gatY tagatose-bisphosphate aldolase BCE_1906 178 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 42783186 Pathogen - hypothetical protein BCE_4140 1 None None None 42781275 Common xylA xylose isomerase BCE_2210 68 COG2115 XylA, Xylose isomerase Carbohydrate transport and metabolism 42783116 Pathogen - hypothetical protein BCE_4069 1 None None None 42782661 Pathogen - hypothetical protein BCE_3611 1 None None None 42779435 Common gabT 4-aminobutyrate aminotransferase BCE_0354 237 COG0160 GabT, 4-aminobutyrate aminotransferase and related aminotransferases Amino acid transport and metabolism 42780573 Pathogen - hypothetical protein BCE_1499 1 None None None 42783655 Common - Predicted transcriptional regulator, putative BCE_4609 4 COG1396 HipB, Predicted transcriptional regulators Transcription 42779920 Common recJ single-stranded-DNA-specific exonuclease RecJ BCE_0844 194 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 42780443 Pathogen - hypothetical protein BCE_1369 1 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 42782453 Common - SH3 domain protein BCE_3400 9 None None None 42782849 Pathogen - hypothetical protein BCE_3799 1 None None None 42780300 Common - S-layer protein, putative BCE_1225 20 None None None 42784368 Pathogen - hypothetical protein BCE_5323 1 None None None 42781837 Common - hypothetical protein BCE_2780 14 None None None 42783337 Pathogen - hypothetical protein BCE_4291 1 None None None 42784411 Common - hypothetical protein BCE_5366 3 None None None 42779540 Pathogen - hypothetical protein BCE_0460 1 None None None 42783245 Common argF ornithine carbamoyltransferase BCE_4199 240 COG0078 ArgF, Ornithine carbamoyltransferase Amino acid transport and metabolism 42779229 Common gerD spore germination protein GerD BCE_0148 3 None None None 42780605 Common hisI phosphoribosyl-AMP cyclohydrolase BCE_1531 213 COG0139 HisI, Phosphoribosyl-AMP cyclohydrolase Amino acid transport and metabolism 42782305 Common - P450 heme-thiolate protein, putative BCE_3250 84 COG2124 CypX, Cytochrome P450 Secondary metabolites biosynthesis, transport, and catabolism 42783325 Common - transcriptional regulator, PadR family domain protein BCE_4279 64 COG1695 COG1695, Predicted transcriptional regulators Transcription 42782788 Common - site-specific recombinase, phage integrase family BCE_3738 14 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42783888 Common - hypothetical protein BCE_4842 3 None None None 42782269 Common - dihydrofolate reductase, putative BCE_3214 22 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 42782794 Common - PTS system, fructose-specific IIABC component BCE_3744 142 COG1299 FruA, Phosphotransferase system, fructose-specific IIC component Carbohydrate transport and metabolism 42781444 Common garR 2-hydroxy-3-oxopropionate reductase BCE_2381 173 COG2084 MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases Lipid metabolism 42783333 Common - transcriptional regulator, TetR family BCE_4287 40 COG1309 AcrR, Transcriptional regulator Transcription 42780556 Common - hypothetical protein BCE_1482 89 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 42779449 Common - hypothetical protein BCE_0368 27 None None None 42783352 Common - helicase, putative BCE_4306 206 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 42779458 Common - DNA polymerase I BCE_0377 179 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 42783422 Common - hypothetical protein BCE_4376 112 COG1806 COG1806, Uncharacterized protein conserved in bacteria Function unknown 42780520 Common - CBS domain protein BCE_1446 9 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 42781638 Common - hypothetical protein BCE_2577 48 COG1695 COG1695, Predicted transcriptional regulators Transcription 42782907 Common - reverse transcriptase/endonuclease protein BCE_3857 91 COG3344 COG3344, Retron-type reverse transcriptase DNA replication, recombination, and repair 42780711 Common hup DNA-binding protein HU BCE_1637 214 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 42781437 Pathogen - hypothetical protein BCE_2374 1 None None None 42784100 Common - comA operon protein, putative BCE_5054 88 COG2050 PaaI, Uncharacterized protein, possibly involved in aromatic compounds catabolism Secondary metabolites biosynthesis, transport, and catabolism 42783947 Common - hypothetical protein BCE_4901 53 COG3182 PiuB, Uncharacterized iron-regulated membrane protein Function unknown 42784657 Common - yycI protein BCE_5612 10 COG4853 COG4853, Uncharacterized protein conserved in bacteria Function unknown 42780216 Pathogen - hypothetical protein BCE_1141 1 None None None 42779916 Common hsdR type I restriction enzyme EcoKI subunit R BCE_0840 131 COG4096 HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 42780056 Pathogen - hypothetical protein BCE_0980 1 None None None 42782888 Common asd aspartate-semialdehyde dehydrogenase BCE_3838 235 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 42779674 Pathogen - hypothetical protein BCE_0594 1 None None None 42784148 Common - hypothetical protein BCE_5102 11 COG4470 COG4470, Uncharacterized protein conserved in bacteria Function unknown 42783486 Common - pterin-4-alpha-carbinolamine dehydratase, putative BCE_4440 95 COG2154 COG2154, Pterin-4a-carbinolamine dehydratase Coenzyme metabolism 42781558 Common - PTS system, cellobiose-specific IIC component, putative BCE_2496 38 COG1455 CelB, Phosphotransferase system cellobiose-specific component IIC Carbohydrate transport and metabolism 42782770 Common - phosphonate ABC transporter, permease protein BCE_3720 116 COG3639 COG3639, ABC-type phosphate/phosphonate transport system, permease component Inorganic ion transport and metabolism 42784323 Pathogen - hypothetical protein BCE_5277 1 None None None 42780320 Common - hypothetical protein BCE_1246 3 None None None 42784297 Common - stage V sporulation protein AE, truncation BCE_5251 15 None None None 42779513 Common - hypothetical protein BCE_0432 5 None None None 42781740 Common - short chain dehydrogenase family protein [imported] BCE_2681 237 COG0300 DltE, Short-chain dehydrogenases of various substrate specificities General function prediction only 42780093 Pathogen - hypothetical protein BCE_1017 1 None None None 42782285 Common - amidohydrolase family protein BCE_3230 164 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 42783191 Common dacF D-alanyl-D-alanine carboxypeptidase BCE_4145 159 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42781011 Common - acetyltransferase, GNAT family BCE_1942 12 None None None 42784082 Common - hypothetical protein BCE_5036 3 None None None 42782994 Common - conserved hypothetical protein TIGR00726 BCE_3946 178 COG1496 COG1496, Uncharacterized conserved protein Function unknown 42783806 Common - universal stress protein family BCE_4760 135 COG0589 UspA, Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms 42784184 Common - CAAX amino terminal protease family protein BCE_5138 64 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 42784287 Common pgk phosphoglycerate kinase BCE_5241 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 42781079 Common - branched-chain amino acid ABC transporter, branched chain amino acid-binding protein, putative BCE_2010 106 COG0683 LivK, ABC-type branched-chain amino acid transport systems, periplasmic component Amino acid transport and metabolism 42783174 Common - hypothetical protein BCE_4127 6 COG1547 COG1547, Uncharacterized conserved protein Function unknown 42782808 Common - heavy metal-transporting ATPase BCE_3758 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 42782199 Common sasP small, acid-soluble spore protein BCE_3144 13 None None None 42784336 Common ftsE cell division ABC transporter, ATP-binding protein FtsE BCE_5290 249 COG2884 FtsE, Predicted ATPase involved in cell division Cell division and chromosome partitioning 42779711 Common - glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative BCE_0632 119 COG1653 UgpB, ABC-type sugar transport system, periplasmic component Carbohydrate transport and metabolism 42779879 Common thiG thiazole synthase BCE_0802 171 COG2022 ThiG, Uncharacterized enzyme of thiazole biosynthesis Nucleotide transport and metabolism 42779906 Pathogen - hypothetical protein BCE_0830 1 None None None 42784578 Common hom homoserine dehydrogenase BCE_5533 217 COG0460 ThrA, Homoserine dehydrogenase Amino acid transport and metabolism 42781652 Common - hypothetical protein BCE_2591 22 COG2334 COG2334, Putative homoserine kinase type II (protein kinase fold) General function prediction only 42782478 Common - oxidoreductase, Gfo/Idh/MocA family BCE_3425 170 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 42783435 Common - gatB/Yqey domain protein BCE_4389 151 COG1610 COG1610, Uncharacterized conserved protein Function unknown 42783610 Common tig trigger factor BCE_4564 215 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 42780014 Pathogen - hypothetical protein BCE_0938 1 None None None 42780877 Common - hypothetical protein BCE_1806 2 None None None 42781379 Common arcD arginine/ornithine antiporter BCE_2315 176 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42782966 Common - transposase, IS605 OrfB family BCE_3918 71 COG0675 COG0675, Transposase and inactivated derivatives DNA replication, recombination, and repair 42783223 Common - hypothetical protein BCE_4177 12 COG3369 COG3369, Uncharacterized conserved protein Function unknown 42781263 Pathogen - hypothetical protein BCE_2197 1 None None None 42780800 Common - sodium/solute symporter family protein BCE_1726 167 COG4147 DhlC, Predicted symporter General function prediction only 42782935 Common - KH domain protein BCE_3885 61 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 42784071 Common glgA glycogen synthase BCE_5025 154 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 42784568 Common - potassium channel, putative BCE_5523 24 COG0569 TrkA, K+ transport systems, NAD-binding component Inorganic ion transport and metabolism 42784455 Common - ABC transporter, ATP-binding protein, putative BCE_5410 246 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42782898 Common truB tRNA pseudouridine synthase B BCE_3848 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 42779152 Common folB dihydroneopterin aldolase BCE_0071 117 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 42781823 Common secY preprotein translocase subunit SecY BCE_2766 233 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 42784561 Common eutD phosphotransacetylase BCE_5516 165 COG0280 Pta, Phosphotransacetylase Energy production and conversion 42781353 Common - mutT/nudix family protein BCE_2289 118 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42782020 Common - hypothetical protein BCE_2964 1 COG2306 COG2306, Uncharacterized conserved protein Function unknown 42779213 Common maP methionine aminopeptidase BCE_0132 249 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 42779940 Pathogen - hypothetical protein BCE_0864 1 None None None 42783095 Common - hypothetical protein BCE_4048 35 COG2199 COG2199, FOG: GGDEF domain Signal transduction mechanisms 42780895 Common - hydrolase, alpha/beta fold family BCE_1824 44 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42782591 Common - mgtC family protein BCE_3541 76 COG1285 SapB, Uncharacterized membrane protein Function unknown 42780433 Common trpC indole-3-glycerol-phosphate synthase BCE_1359 219 COG0134 TrpC, Indole-3-glycerol phosphate synthase Amino acid transport and metabolism 42782431 Pathogen - hypothetical protein BCE_3378 1 None None None 42779135 Common - tetrapyrrole methylase family protein/MazG family protein BCE_0054 155 COG3956 COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain General function prediction only 42782677 Common - glycosyl hydrolase, family 18 BCE_3627 78 COG3858 COG3858, Predicted glycosyl hydrolase General function prediction only 42781888 Common - hypothetical protein BCE_2831 41 COG2315 MmcQ, Uncharacterized protein conserved in bacteria Function unknown 42782515 Common - hypothetical protein BCE_3463 56 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 42784343 Common cspC cold shock protein CspC BCE_5298 182 COG1278 CspC, Cold shock proteins Transcription 42781453 Common - exonuclease SbcD, putative BCE_2390 82 COG0420 SbcD, DNA repair exonuclease DNA replication, recombination, and repair 42782249 Common - drug resistance transporter, EmrB/QacA subfamily BCE_3194 207 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42782493 Common - hypothetical protein BCE_3440 11 None None None 42780750 Common nth endonuclease III BCE_1676 240 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 42780593 Common ilvC ketol-acid reductoisomerase BCE_1519 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 42779894 Common - xanthine/uracil permease family protein BCE_0817 135 COG2252 COG2252, Permeases General function prediction only 42779955 Common - major facilitator family transporter BCE_0879 204 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42783031 Common - hypothetical protein BCE_3983 3 None None None 42782552 Common - N-acetyltransferase family protein, putative BCE_3501 37 COG2162 NhoA, Arylamine N-acetyltransferase Secondary metabolites biosynthesis, transport, and catabolism 42782883 Common - metallo-beta-lactamase family protein BCE_3833 162 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 42783207 Common spoIIM stage II sporulation protein M BCE_4161 11 COG1300 SpoIIM, Uncharacterized membrane protein Function unknown 42779314 Pathogen - hypothetical protein BCE_0233 1 None None None 42780541 Pathogen - hypothetical protein BCE_1467 1 None None None 42781962 Common - degV family protein BCE_2906 57 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 42779237 Common - hypothetical protein BCE_0156 26 COG4856 COG4856, Uncharacterized protein conserved in bacteria Function unknown 42783388 Common - hypothetical protein BCE_4342 1 None None None 42779264 Common - Tn7-like transposition protein B BCE_0183 50 None None None 42780969 Common - sugar ABC transporter, permease protein, putative BCE_1900 159 COG1175 UgpA, ABC-type sugar transport systems, permease components Carbohydrate transport and metabolism 42780359 Common - hydrolase, haloacid dehalogenase-like family BCE_1285 132 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 42780363 Pathogen - hypothetical protein BCE_1289 1 None None None 42783000 Common ftsA cell division protein FtsA BCE_3952 184 COG0849 FtsA, Actin-like ATPase involved in cell division Cell division and chromosome partitioning 42781138 Common - hypothetical protein BCE_2072 9 COG3878 COG3878, Uncharacterized protein conserved in bacteria Function unknown 42780546 Common - transcriptional regulator, GntR family BCE_1472 139 COG1725 COG1725, Predicted transcriptional regulators Transcription 42779240 Common - hypothetical protein BCE_0159 4 None None None 42780617 Common - hypothetical protein BCE_1543 3 COG5583 COG5583, Uncharacterized small protein Function unknown 42781332 Common - penicillin-binding protein BCE_2268 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 42781936 Common - hypothetical protein BCE_2880 4 None None None 42782242 Common - oxidoreductase, putative BCE_3187 98 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 42779419 Common - 1-pyrroline-5-carboxylate dehydrogenase BCE_0338 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 42780807 Common - hypothetical protein BCE_1733 42 COG2323 COG2323, Predicted membrane protein Function unknown 42781018 Common - acetyltransferase, GNAT family BCE_1949 22 COG2388 COG2388, Predicted acetyltransferase General function prediction only 42783912 Common - thiamine/molybdopterin biosynthesis MoeB-like protein BCE_4866 216 COG0476 ThiF, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Coenzyme metabolism 42780277 Pathogen - hypothetical protein BCE_1202 1 None None None 42781526 Common - transcriptional regulator, LysR family BCE_2464 191 COG0583 LysR, Transcriptional regulator Transcription 42782325 Common - sensor histidine kinase BCE_3271 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42781503 Common - transcriptional regulator, TetR family BCE_2441 89 COG1309 AcrR, Transcriptional regulator Transcription 42782748 Common hipO peptidase, M20/M25/M40 family BCE_3698 172 COG1473 AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase General function prediction only 42783359 Common aroK shikimate kinase BCE_4313 174 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 42781828 Common - hydrolase, alpha/beta fold family BCE_2771 86 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42782577 Common paiB protease synthase and sporulation negative regulatory protein PAI 2 BCE_3526 2 COG2808 PaiB, Transcriptional regulator Transcription 42783667 Common - hypothetical protein BCE_4621 3 None None None 42781947 Common - x-prolyl-dipeptidyl aminopeptidase BCE_2891 44 COG2936 COG2936, Predicted acyl esterases General function prediction only 42779641 Common - NAD-dependent epimerase/dehydratase family protein BCE_0561 236 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42781715 Common - acetyltransferase, CYSE/LACA/LPXA/NODL family BCE_2656 74 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 42780486 Common - lipoprotein, putative BCE_1412 27 COG3391 COG3391, Uncharacterized conserved protein Function unknown 42782315 Pathogen - hypothetical protein BCE_3260 1 None None None 42779137 Common - yabP protein BCE_0056 15 None None None 42779299 Pathogen - hypothetical protein BCE_0218 1 None None None 42781289 Common - HD domain protein BCE_2224 60 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 42780106 Common - hypothetical protein BCE_1030 94 COG0730 COG0730, Predicted permeases General function prediction only 42781110 Common - sensor histidine kinase BCE_2042 221 COG5002 VicK, Signal transduction histidine kinase Signal transduction mechanisms 42779199 Common rpmC 50S ribosomal protein L29 BCE_0118 182 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 42779515 Common - transcriptional regulator domain protein BCE_0434 7 None None None 42783604 Common - transcriptional regulator, MarR family BCE_4558 124 COG1846 MarR, Transcriptional regulators Transcription 42782209 Common - ImpB/MucB/SamB family protein BCE_3154 178 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 42784098 Common - hypothetical protein BCE_5052 30 COG4912 COG4912, Predicted DNA alkylation repair enzyme DNA replication, recombination, and repair 42779141 Common spoIIE stage II sporulation protein E BCE_0060 30 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 42780504 Common phaC poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit BCE_1430 79 COG3243 PhaC, Poly(3-hydroxyalkanoate) synthetase Lipid metabolism 42781171 Common - hypothetical protein BCE_2105 48 COG0702 COG0702, Predicted nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42782129 Common - ATPase, AAA family BCE_3073 182 COG0714 COG0714, MoxR-like ATPases General function prediction only 42781022 Common - hypothetical protein BCE_1953 31 COG1506 DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases Amino acid transport and metabolism 42784107 Common - hypothetical protein BCE_5061 24 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 42781284 Common - hypothetical protein BCE_2219 5 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 42779652 Common - hypothetical protein BCE_0572 4 None None None 42782690 Pathogen cotM spore coat protein M BCE_3640 1 COG0071 IbpA, Molecular chaperone (small heat shock protein) Posttranslational modification, protein turnover, chaperones 42780298 Common - peptidase, M48 family BCE_1223 62 COG0501 HtpX, Zn-dependent protease with chaperone function Posttranslational modification, protein turnover, chaperones 42782709 Common ureG urease accessory protein UreG BCE_3659 145 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 42783701 Common - hypothetical protein BCE_4655 6 COG2318 DinB, Uncharacterized protein conserved in bacteria Function unknown 42782776 Common - site-specific recombinase, resolvase family BCE_3726 26 COG1961 PinR, Site-specific recombinases, DNA invertase Pin homologs DNA replication, recombination, and repair 42783368 Common - hypothetical protein BCE_4322 21 COG2345 COG2345, Predicted transcriptional regulator Transcription 42779185 Common - hypothetical protein BCE_0104 14 COG1358 RPL8A, Ribosomal protein HS6-type (S12/L30/L7a) Translation, ribosomal structure and biogenesis 42779827 Pathogen - hypothetical protein BCE_0749 1 None None None 42784514 Pathogen - hypothetical protein BCE_5469 1 None None None 42784091 Common - aminotransferase, classes I and II BCE_5045 232 COG1168 MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities Amino acid transport and metabolism 42780129 Common - hypothetical protein BCE_1053 13 COG1309 AcrR, Transcriptional regulator Transcription 42783824 Common ppnK inorganic polyphosphate/ATP-NAD kinase BCE_4778 157 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 42780638 Pathogen - hypothetical protein BCE_1564 1 None None None 42782293 Pathogen - hypothetical protein BCE_3238 1 None None None 42782563 Common - hypothetical protein BCE_3512 3 None None None 42779239 Common glmS D-fructose-6-phosphate amidotransferase BCE_0158 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 42779803 Common - oligopeptide ABC transporter, permease protein BCE_0725 221 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42782463 Common - 6-phosphogluconate dehydrogenase-like protein BCE_3410 179 COG1023 Gnd, Predicted 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 42779420 Common - hypothetical protein BCE_0339 2 None None None 42783006 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase BCE_3958 211 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 42779972 Common cotJB cotJB protein BCE_0896 9 None None None 42780559 Common dltC D-alanine--poly(phosphoribitol) ligase subunit 2 BCE_1485 12 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 42781136 Common - phospholipase, putative BCE_2070 37 COG1752 RssA, Predicted esterase of the alpha-beta hydrolase superfamily General function prediction only 42784377 Common - LPXTG-motif cell wall anchor domain BCE_5332 28 COG4932 COG4932, Predicted outer membrane protein Cell envelope biogenesis, outer membrane 42782624 Common - rarD protein BCE_3574 99 COG2962 RarD, Predicted permeases General function prediction only 42782498 Common - MutT/nudix family protein, putative BCE_3445 8 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42783826 Common - hypothetical protein BCE_4780 77 COG2764 PhnB, Uncharacterized protein conserved in bacteria Function unknown 42784303 Common - hypothetical protein BCE_5257 54 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 42781003 Common ilvB acetolactate synthase 3 catalytic subunit BCE_1934 221 COG0028 IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] Amino acid transport and metabolism / Coenzyme metabolism 42781873 Common proV glycine betaine/L-proline ABC transporter, ATP-binding protein BCE_2816 249 COG4175 ProV, ABC-type proline/glycine betaine transport system, ATPase component Amino acid transport and metabolism 42781865 Pathogen - hypothetical protein BCE_2808 1 None None None 42783965 Pathogen - hypothetical protein BCE_4919 1 None None None 42781810 Common gerXA spore germination protein XA BCE_2753 15 None None None 42782759 Pathogen - hypothetical protein BCE_3709 1 None None None 42781190 Common - spore coat protein, putative BCE_2124 2 None None None 42782029 Common - hypothetical protein BCE_2973 11 None None None 42784236 Common - sodium/alanine symporter family protein BCE_5190 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 42779748 Common - lipoprotein, putative BCE_0670 4 None None None 42783482 Common - tolB domain protein BCE_4436 9 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 42779174 Common sigH RNA polymerase factor sigma-70 BCE_0093 83 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42784681 Common jag jag protein BCE_5636 70 COG1847 Jag, Predicted RNA-binding protein General function prediction only 42781294 Common - transcriptional regulator, TetR family BCE_2229 62 COG1309 AcrR, Transcriptional regulator Transcription 42783460 Common - conserved hypothetical protein TIGR00253 BCE_4414 97 COG1534 COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein Translation, ribosomal structure and biogenesis 42779494 Pathogen - hypothetical protein BCE_0413 1 None None None 42779568 Common - anaerobic C4-dicarboxylate transporter BCE_0488 36 COG2704 DcuB, Anaerobic C4-dicarboxylate transporter General function prediction only 42782618 Common - hypothetical protein BCE_3568 19 COG3924 COG3924, Predicted membrane protein Function unknown 42780057 Common - hypothetical protein BCE_0981 10 COG4997 COG4997, Uncharacterized conserved protein Function unknown 42784605 Common - polysaccharide biosynthesis protein, putative BCE_5560 63 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42779534 Pathogen - hypothetical protein BCE_0453 1 None None None 42783558 Common - lysM domain protein BCE_4512 6 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 42783772 Common - hypothetical protein BCE_4726 28 COG2707 COG2707, Predicted membrane protein Function unknown 42780560 Common dltB dltB protein BCE_1486 85 COG1696 DltB, Predicted membrane protein involved in D-alanine export Cell envelope biogenesis, outer membrane 42782482 Pathogen - hypothetical protein BCE_3429 1 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42780138 Pathogen - hypothetical protein BCE_1062 1 None None None 42780911 Common fumC fumarate hydratase BCE_1841 231 COG0114 FumC, Fumarase Energy production and conversion 42782607 Common - mutT/nudix family protein BCE_3557 2 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42779979 Pathogen - hypothetical protein BCE_0903 1 None None None 42783057 Common cad lysine decarboxylase BCE_4009 93 COG1982 LdcC, Arginine/lysine/ornithine decarboxylases Amino acid transport and metabolism 42779378 Pathogen - hypothetical protein BCE_0297 1 None None None 42782986 Common lspA lipoprotein signal peptidase BCE_3938 134 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 42779679 Pathogen - hypothetical protein BCE_0599 1 None None None 42779999 Common - transcriptional regulator, MerR family BCE_0923 102 COG0789 SoxR, Predicted transcriptional regulators Transcription 42780318 Common addB ATP-dependent nuclease, subunit B BCE_1244 24 COG3857 AddB, ATP-dependent nuclease, subunit B DNA replication, recombination, and repair 42781731 Common - hypothetical protein BCE_2672 2 None None None 42783378 Common metH 5-methyltetrahydrofolate--homocysteine methyltransferase BCE_4332 180 COG1410 MetH, Methionine synthase I, cobalamin-binding domain Amino acid transport and metabolism 42783513 Common - conserved hypothetical protein TIGR00247 BCE_4467 13 COG1559 COG1559, Predicted periplasmic solute-binding protein General function prediction only 42783563 Common - hypothetical protein BCE_4517 15 COG1827 COG1827, Predicted small molecule binding protein (contains 3H domain) General function prediction only 42781729 Pathogen - conserved hypothetical protein subfamily, putative BCE_2670 1 None None None 42781768 Common - chitosanase BCE_2710 7 None None None 42779683 Common - sensory box/GGDEF family protein BCE_0603 183 COG5001 COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Signal transduction mechanisms 42781062 Common acpD azoreductase BCE_1993 88 COG1182 AcpD, Acyl carrier protein phosphodiesterase Lipid metabolism 42780743 Common panC pantoate--beta-alanine ligase BCE_1669 182 COG0414 PanC, Panthothenate synthetase Coenzyme metabolism 42779468 Common - hypothetical protein BCE_0387 3 None None None 42782225 Pathogen - hypothetical protein BCE_3170 1 None None None 42782009 Pathogen - hypothetical protein BCE_2953 1 None None None 42779440 Common ampS aminopeptidase AmpS BCE_0359 56 COG2309 AmpS, Leucyl aminopeptidase (aminopeptidase T) Amino acid transport and metabolism 42781029 Common - manganese transport protein MntH BCE_1960 108 COG1914 MntH, Mn2+ and Fe2+ transporters of the NRAMP family Inorganic ion transport and metabolism 42779707 Common - glycerol uptake operon antiterminator regulatory protein, putative BCE_0628 26 COG1954 GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) Transcription 42781595 Common - RNA polymerase sigma-70 factor, ECF subfamily BCE_2534 170 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42782864 Common recA recombinase A BCE_3814 237 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 42783592 Common maf Maf-like protein BCE_4546 197 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 42780726 Pathogen - hypothetical protein BCE_1652 1 None None None 42781847 Pathogen - hypothetical protein BCE_2790 1 None None None 42780005 Common - hypothetical protein BCE_0929 151 COG1733 COG1733, Predicted transcriptional regulators Transcription 42783877 Common - nicotinate phosphoribosyltransferase BCE_4831 108 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 42783099 Common - hypothetical protein BCE_4052 21 COG1695 COG1695, Predicted transcriptional regulators Transcription 42784539 Common - hypothetical protein BCE_5494 9 COG4506 COG4506, Uncharacterized protein conserved in bacteria Function unknown 42782287 Common - glyoxylase family protein BCE_3232 78 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42782355 Pathogen - hypothetical protein BCE_3302 2 None None None 42783467 Common sigK sporulation sigma factor SigK BCE_4421 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42781544 Pathogen - hypothetical protein BCE_2482 1 None None None 42780021 Common - amino acid ABC transporter, amino acid-binding protein BCE_0945 184 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 42780061 Common - hypothetical protein BCE_0985 23 COG1041 COG1041, Predicted DNA modification methylase DNA replication, recombination, and repair 42782813 Common efflux cation efflux family protein BCE_3763 213 COG1230 CzcD, Co/Zn/Cd efflux system component Inorganic ion transport and metabolism 42784395 Pathogen - hypothetical protein BCE_5350 1 None None None 42781140 Common - mutT/nudix family protein BCE_2074 115 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42781573 Common - ABC transporter, permease protein, putative BCE_2511 125 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779751 Common - transcription antiterminator, LytR family BCE_0673 63 COG1316 LytR, Transcriptional regulator Transcription 42780143 Common - bacterial luciferase family protein BCE_1067 81 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 42780609 Common - glycerate dehydrogenase BCE_1535 231 COG1052 LdhA, Lactate dehydrogenase and related dehydrogenases Energy production and conversion / Coenzyme metabolism / General function prediction only 42781097 Common - O-acetyltransferase, putative BCE_2028 55 COG0110 WbbJ, Acetyltransferase (isoleucine patch superfamily) General function prediction only 42783931 Common - trkA domain protein BCE_4885 26 COG0490 COG0490, Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels Inorganic ion transport and metabolism 42779355 Common - transcriptional regulator, PemK family BCE_0274 55 COG2337 MazF, Growth inhibitor Signal transduction mechanisms 42782468 Pathogen - hypothetical protein BCE_3415 1 None None None 42783317 Common pepQ proline dipeptidase BCE_4271 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 42782695 Common - hypothetical protein BCE_3645 6 None None None 42782118 Common - lipoprotein, putative BCE_3062 72 COG0715 TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Inorganic ion transport and metabolism 42782162 Common - regulator of pmrA, putative BCE_3106 97 COG0789 SoxR, Predicted transcriptional regulators Transcription 42782328 Common - transcriptional regulator, MarR family BCE_3274 23 COG1846 MarR, Transcriptional regulators Transcription 42783926 Pathogen - vrrB protein BCE_4880 1 COG5180 PBP1, Protein interacting with poly(A)-binding protein RNA processing and modification 42782504 Pathogen - hypothetical protein BCE_3451 1 None None None 42782069 Common - ribose ABC transporter, permease protein, putative BCE_3013 114 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 42781479 Common - RNA pseudouridylate synthase family protein BCE_2417 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 42781913 Common - acetyltransferase, GNAT family BCE_2856 34 COG0456 RimI, Acetyltransferases General function prediction only 42779721 Pathogen - hypothetical protein BCE_0643 1 None None None 42782070 Common - ribose ABC transporter, permease protein, putative BCE_3014 160 COG1172 AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Carbohydrate transport and metabolism 42779607 Common - hypothetical protein BCE_0527 8 None None None 42779804 Common - oligopeptide ABC transporter, permease protein BCE_0726 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42783296 Pathogen - hypothetical protein BCE_4250 1 None None None 42780475 Common potD spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein BCE_1401 141 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 42782391 Common - acetyltransferase, GNAT family BCE_3338 89 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42783301 Common nusB transcription antitermination protein NusB BCE_4255 203 COG0781 NusB, Transcription termination factor Transcription 42784589 Common - hypothetical protein BCE_5544 27 COG2879 COG2879, Uncharacterized small protein Function unknown 42783063 Pathogen - hypothetical protein BCE_4016 1 None None None 42780706 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase BCE_1632 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 42781588 Common - hypothetical protein BCE_2526 4 COG5294 COG5294, Uncharacterized protein conserved in bacteria Function unknown 42782397 Common - DNA-binding protein BCE_3344 16 COG1396 HipB, Predicted transcriptional regulators Transcription 42781366 Common gntK gluconate kinase BCE_2302 183 COG1070 XylB, Sugar (pentulose and hexulose) kinases Carbohydrate transport and metabolism 42781874 Common - glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein, putative BCE_2817 3 COG2113 ProX, ABC-type proline/glycine betaine transport systems, periplasmic components Amino acid transport and metabolism 42784608 Pathogen - hypothetical protein BCE_5563 1 None None None 42780326 Common gerPA spore germination protein GerPA BCE_1252 2 None None None 42780627 Pathogen - hypothetical protein BCE_1553 1 None None None 42784047 Common - hypothetical protein BCE_5001 15 None None None 42779144 Common ftsH cell division protein FtsH BCE_0063 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 42783204 Common xerD site-specific tyrosine recombinase XerD BCE_4158 232 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42783263 Common - ribosomal-protein-alanine acetyltransferase, putative BCE_4217 113 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42782085 Common proB gamma-glutamyl kinase BCE_3029 196 COG0263 ProB, Glutamate 5-kinase Amino acid transport and metabolism 42783212 Common - oxidoreductase, aldo/keto reductase family BCE_4166 192 COG0656 ARA1, Aldo/keto reductases, related to diketogulonate reductase General function prediction only 42783193 Common - ABC transporter, ATP-binding protein BCE_4147 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42784021 Common hpt hypoxanthine-guanine phosphoribosyltransferase BCE_4975 154 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 42781999 Pathogen - hypothetical protein BCE_2943 1 None None None 42780462 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_1388 152 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42784213 Common - cytolysin immunity CylI domain protein BCE_5167 2 None None None 42784090 Common - hypothetical protein BCE_5044 2 None None None 42782706 Common nicT/nixA high affinity nickel transporter protein BCE_3656 41 COG3376 HoxN, High-affinity nickel permease Inorganic ion transport and metabolism 42783843 Pathogen - hypothetical protein BCE_4797 1 None None None 42779389 Common - aspartate racemase BCE_0308 95 COG1794 RacX, Aspartate racemase Cell envelope biogenesis, outer membrane 42783456 Common - hypothetical protein BCE_4410 107 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42781047 Common cdd cytidine deaminase BCE_1978 118 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 42781245 Common - 6'-aminoglycoside N-acetyltransferase/2''-aminoglycoside phosphotransferase, putative BCE_2179 9 COG3173 COG3173, Predicted aminoglycoside phosphotransferase General function prediction only 42781625 Common - DNA-binding response regulator BCE_2564 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42782147 Common - mutT/nudix family protein BCE_3091 11 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 42781477 Pathogen - hypothetical protein BCE_2414 1 None None None 42781614 Common - carboxyl transferase domain protein BCE_2553 161 COG4799 COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Lipid metabolism 42782192 Common ppsA phosphoenolpyruvate synthase BCE_3137 158 COG0574 PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Carbohydrate transport and metabolism 42782161 Pathogen - hypothetical protein BCE_3105 1 None None None 42782747 Common - hypothetical protein BCE_3697 89 COG5006 COG5006, Predicted permease, DMT superfamily General function prediction only 42784344 Common comFC comF operon protein 3 BCE_5299 143 COG1040 ComFC, Predicted amidophosphoribosyltransferases General function prediction only 42783878 Common - FtsK/SpoIIIE family protein BCE_4832 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 42781037 Common nheA non-hemolytic enterotoxin A BCE_1968 7 None None None 42782167 Common - Signal peptidase I BCE_3112 174 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 42782377 Common - ABC transporter, permease protein BCE_3324 39 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 42780362 Common - hypothetical protein BCE_1288 3 None None None 42784433 Common - hypothetical protein BCE_5388 17 None None None 42779516 Common nhaC Na+/H+ antiporter NhaC BCE_0435 64 COG1757 NhaC, Na+/H+ antiporter Energy production and conversion 42780386 Common cls cardiolipin synthetase BCE_1312 154 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 42784265 Pathogen - hypothetical protein BCE_5219 1 None None None 42784598 Common - hypothetical protein BCE_5553 7 COG1807 ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family Cell envelope biogenesis, outer membrane 42780405 Common - glycosyl transferase, group 2 family protein BCE_1331 52 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42782171 Common pcP pyrrolidone-carboxylate peptidase BCE_3116 55 COG2039 Pcp, Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) Posttranslational modification, protein turnover, chaperones 42780776 Pathogen - hypothetical protein BCE_1702 1 None None None 42779881 Common thiD phosphomethylpyrimidine kinase BCE_0804 223 COG0351 ThiD, Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase Coenzyme metabolism 42779915 Common - type I restriction-modification system, M subunit, putative BCE_0839 98 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 42782403 Pathogen - hypothetical protein BCE_3350 1 None None None 42783859 Common ccpA catabolite control protein A BCE_4813 131 COG1609 PurR, Transcriptional regulators Transcription 42779306 Pathogen - hypothetical protein BCE_0225 1 None None None 42782218 Common - hypothetical protein BCE_3163 99 COG1574 COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold General function prediction only 42779115 Common - conserved hypothetical protein TIGR00096 BCE_0034 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 42780854 Common - transglycosylase, SLT family BCE_1781 172 COG0741 MltE, Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cell envelope biogenesis, outer membrane 42783636 Common - major facilitator family transporter BCE_4590 151 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42784164 Common - aminotransferase, class V BCE_5118 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 42784304 Common - hypothetical protein BCE_5258 99 COG0391 COG0391, Uncharacterized conserved protein Function unknown 42784537 Common - RNA polymerase sigma factor BCE_5492 149 COG1595 RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog Transcription 42784002 Pathogen - hypothetical protein BCE_4956 1 None None None 42780387 Common - hypothetical protein BCE_1313 14 COG4469 CoiA, Competence protein General function prediction only 42780380 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_1306 196 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42782981 Common pyrC dihydroorotase BCE_3933 214 COG0044 PyrC, Dihydroorotase and related cyclic amidohydrolases Nucleotide transport and metabolism 42779812 Common rbsD ribose ABC transporter protein BCE_0734 44 COG1869 RbsD, ABC-type ribose transport system, auxiliary component Carbohydrate transport and metabolism 42780341 Common - hypothetical protein BCE_1267 14 COG1971 COG1971, Predicted membrane protein Function unknown 42782021 Common - mutT/nudix family protein BCE_2965 14 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42780531 Pathogen - hypothetical protein BCE_1457 1 None None None 42779315 Common - yitT family protein BCE_0234 73 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42783996 Common cydB cytochrome d ubiquinol oxidase, subunit II BCE_4950 153 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 42784066 Common - hypothetical protein BCE_5020 69 COG2013 COG2013, Uncharacterized conserved protein Function unknown 42779088 Pathogen - hypothetical protein BCE_0007 1 None None None 42780450 Common - hypothetical protein BCE_1376 31 None None None 42784462 Common nuoL NADH dehydrogenase subunit L BCE_5417 210 COG1009 NuoL, NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit Energy production and conversion / Inorganic ion transport and metabolism 42781157 Common - hypothetical protein BCE_2091 22 COG3949 COG3949, Uncharacterized membrane protein Function unknown 42781664 Common - oxidoreductase, zinc-binding dehydrogenase family superfamily BCE_2604 73 COG1063 Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases Amino acid transport and metabolism / General function prediction only 42780943 Common - sensor histidine kinase BCE_1874 180 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779283 Common - drug resistance transporter, Bcr/CflA family BCE_0202 224 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 42779423 Common - ABC transporter, permease protein BCE_0342 107 COG2011 AbcD, ABC-type metal ion transport system, permease component Inorganic ion transport and metabolism 42783499 Common - aldehyde-alcohol dehydrogenase BCE_4453 175 COG1454 EutG, Alcohol dehydrogenase, class IV Energy production and conversion 42783492 Common - acetyltransferase, GNAT family BCE_4446 106 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42780401 Common - hypothetical protein BCE_1327 23 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 42782284 Pathogen - transcriptional regulator, AsnC family BCE_3229 1 COG1522 Lrp, Transcriptional regulators Transcription 42781224 Common - 4-oxalocrotonate decarboxylase BCE_2158 66 COG3971 COG3971, 2-keto-4-pentenoate hydratase Secondary metabolites biosynthesis, transport, and catabolism 42779483 Common - uncharacterized phage protein (possible DNA packaging) BCE_0402 6 None None None 42779730 Pathogen - hypothetical protein BCE_0652 1 None None None 42780689 Common - transcriptional regulator, MerR family BCE_1615 1 None None None 42781986 Pathogen - hypothetical protein BCE_2930 1 None None None 42782737 Common - hypothetical protein BCE_3687 3 None None None 42783514 Common - hypothetical protein BCE_4468 10 COG3906 COG3906, Uncharacterized protein conserved in bacteria Function unknown 42779933 Pathogen - hypothetical protein BCE_0857 1 None None None 42780280 Pathogen - hypothetical protein BCE_1205 1 None None None 42781844 Common kynU kynureninase BCE_2787 123 COG3844 COG3844, Kynureninase Amino acid transport and metabolism 42780410 Common rfbC dTDP-4-dehydrorhamnose 3,5-epimerase BCE_1336 166 COG1898 RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes Cell envelope biogenesis, outer membrane 42782145 Common - acetyltransferase, GNAT family BCE_3089 14 COG1247 COG1247, Sortase and related acyltransferases Cell envelope biogenesis, outer membrane 42782581 Common - glycolate oxidase, subunit GlcD, putative BCE_3530 202 COG0277 GlcD, FAD/FMN-containing dehydrogenases Energy production and conversion 42781696 Common - hypothetical protein BCE_2637 2 None None None 42779472 Common metK S-adenosylmethionine synthetase BCE_0391 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 42783715 Common - iron compound ABC transporter, permease protein BCE_4669 191 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 42781236 Common - transcriptional regulator, GntR family BCE_2170 173 COG1167 ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Transcription / Amino acid transport and metabolism 42784629 Common - hypothetical protein BCE_5584 3 None None None 42780901 Common - BNR repeat domain protein BCE_1831 36 None None None 42780358 Common - hypothetical protein BCE_1284 2 None None None 42782865 Common cinA competence damage-inducible protein A BCE_3815 214 COG1058 CinA, Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA General function prediction only 42779132 Common mfd transcription-repair coupling factor BCE_0051 237 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 42782667 Common parE DNA topoisomerase IV subunit B BCE_3617 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 42783124 Common - mutT/nudix family protein BCE_4077 91 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42782809 Common - copper-ion-binding protein BCE_3759 92 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 42780771 Common xpt xanthine phosphoribosyltransferase BCE_1697 69 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 42780933 Common - DNA-binding response regulator, LuxR family BCE_1863 219 COG2197 CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Signal transduction mechanisms / Transcription 42780558 Common dltD dltD protein BCE_1484 14 COG3966 DltD, Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) Cell envelope biogenesis, outer membrane 42782133 Common - tetracycline resistance protein BCE_3077 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 42781052 Common - hypothetical protein BCE_1983 2 None None None 42781670 Common - hypothetical protein BCE_2610 5 COG2227 UbiG, 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Coenzyme metabolism 42781850 Pathogen - hypothetical protein BCE_2793 1 None None None 42780193 Common - hypothetical protein BCE_1117 8 COG4899 COG4899, Uncharacterized protein conserved in bacteria Function unknown 42779208 Common rpsE 30S ribosomal protein S5 BCE_0127 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 42781399 Common - hypothetical protein BCE_2336 12 COG4479 COG4479, Uncharacterized protein conserved in bacteria Function unknown 42783966 Common - transporter, EamA family BCE_4920 188 COG2962 RarD, Predicted permeases General function prediction only 42779826 Common - hypothetical protein BCE_0748 9 COG4767 VanZ, Glycopeptide antibiotics resistance protein Defense mechanisms 42781987 Pathogen - hypothetical protein BCE_2931 1 None None None 42783262 Common pepT peptidase T BCE_4216 131 COG2195 PepD, Di- and tripeptidases Amino acid transport and metabolism 42781177 Common fosB fosfomycin resistance protein FosB BCE_2111 19 COG0346 GloA, Lactoylglutathione lyase and related lyases Amino acid transport and metabolism 42782895 Common pnp polynucleotide phosphorylase/polyadenylase BCE_3845 240 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 42784594 Common - glycosyl transferase, group 1 family protein BCE_5549 221 COG0438 RfaG, Glycosyltransferase Cell envelope biogenesis, outer membrane 42784677 Common - stage 0 sporulation protein J, putative BCE_5632 187 COG1475 Spo0J, Predicted transcriptional regulators Transcription 42784408 Common - hypothetical protein BCE_5363 3 COG4715 COG4715, Uncharacterized conserved protein Function unknown 42779830 Common - hypothetical protein BCE_0752 19 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 42780392 Common - hypothetical protein BCE_1318 9 COG4116 COG4116, Uncharacterized protein conserved in bacteria Function unknown 42780632 Pathogen - hypothetical protein BCE_1558 1 None None None 42779651 Common recX recombination regulator RecX BCE_0571 34 COG2137 OraA, Uncharacterized protein conserved in bacteria General function prediction only 42779611 Common - transporter, EamA family BCE_0531 49 COG2510 COG2510, Predicted membrane protein Function unknown 42780038 Common - hypothetical protein BCE_0962 22 COG5632 COG5632, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42779779 Common gerKC spore germination protein GerKC BCE_0701 13 None None None 42780721 Common - hypothetical protein BCE_1647 8 COG5582 COG5582, Uncharacterized conserved protein Function unknown 42779177 Common nusG transcription antitermination protein NusG BCE_0096 215 COG0250 NusG, Transcription antiterminator Transcription 42779303 Common - molybdenum ABC transporter, molybdate-binding protein BCE_0222 166 COG0725 ModA, ABC-type molybdate transport system, periplasmic component Inorganic ion transport and metabolism 42780950 Common - DNA-binding protein BCE_1881 26 COG1476 COG1476, Predicted transcriptional regulators Transcription 42784038 Common - permease, putative BCE_4992 17 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 42780144 Common - hypothetical protein BCE_1068 11 COG0189 RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) Coenzyme metabolism / Translation, ribosomal structure and biogenesis 42782786 Pathogen - hypothetical protein BCE_3736 1 None None None 42781122 Common - hypothetical protein BCE_2054 2 None None None 42783984 Pathogen - hypothetical protein BCE_4938 1 None None None 42782536 Common - iron compound ABC transporter, iron compound-binding protein, putative BCE_3485 55 COG0614 FepB, ABC-type Fe3+-hydroxamate transport system, periplasmic component Inorganic ion transport and metabolism 161511023 Common - 3-hydroxybutyrate dehydrogenase BCE_4084 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42779605 Common - transporter, EamA family BCE_0525 123 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 42780957 Common - mutT/nudix family protein BCE_1888 47 COG1051 COG1051, ADP-ribose pyrophosphatase Nucleotide transport and metabolism 42781081 Common - branched-chain amino acid ABC transporter, ATP-binding protein BCE_2012 249 COG0410 LivF, ABC-type branched-chain amino acid transport systems, ATPase component Amino acid transport and metabolism 42779122 Common - veg protein BCE_0041 18 COG4466 Veg, Uncharacterized protein conserved in bacteria Function unknown 42781763 Pathogen - hypothetical protein BCE_2705 1 None None None 42784661 Pathogen - hypothetical protein BCE_5616 1 None None None 42779639 Common - glycosyl transferase, group 2 family protein BCE_0559 146 COG0463 WcaA, Glycosyltransferases involved in cell wall biogenesis Cell envelope biogenesis, outer membrane 42783673 Common - xanthine/uracil permease family protein BCE_4627 78 COG2233 UraA, Xanthine/uracil permeases Nucleotide transport and metabolism 42780000 Pathogen - hypothetical protein BCE_0924 1 None None None 42782366 Common - transcriptional regulator, TetR family BCE_3313 19 COG1309 AcrR, Transcriptional regulator Transcription 42780986 Common - oligopeptide ABC transporter, oligopeptide-binding protein BCE_1917 195 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 42783871 Common - ribosomal-protein-serine acetyltransferase, putative BCE_4825 132 COG1670 RimL, Acetyltransferases, including N-acetylases of ribosomal proteins Translation, ribosomal structure and biogenesis 42781231 Common - acetyltransferase, GNAT family BCE_2165 17 COG0456 RimI, Acetyltransferases General function prediction only 42781803 Pathogen - hypothetical protein BCE_2746 1 None None None 42782939 Common ftsY signal recognition particle-docking protein FtsY BCE_3889 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 42783336 Pathogen - hypothetical protein BCE_4290 1 None None None 42780551 Common - transcriptional regulator, AbrB family BCE_1477 58 COG1266 COG1266, Predicted metal-dependent membrane protease General function prediction only 42779799 Common - sulfate permease family protein BCE_0721 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 42784039 Common - ABC transporter, ATP-binding protein BCE_4993 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42784483 Common - hypothetical protein BCE_5438 2 COG5336 COG5336, Uncharacterized protein conserved in bacteria Function unknown 42782455 Common - oxidoreductase, putative BCE_3402 118 COG0673 MviM, Predicted dehydrogenases and related proteins General function prediction only 42784331 Common - ABC transporter, ATP-binding/permease protein BCE_5285 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 42783687 Common - D-alanyl-D-alanine carboxypeptidase family protein BCE_4641 50 COG1876 VanY, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 42784226 Common - methyl-accepting chemotaxis protein BCE_5180 152 COG0840 Tar, Methyl-accepting chemotaxis protein Cell motility and secretion / Signal transduction mechanisms 42781214 Common - 4-hydroxyphenylacetate-3-hydroxylase BCE_2148 50 COG2368 COG2368, Aromatic ring hydroxylase Secondary metabolites biosynthesis, transport, and catabolism 42779772 Common cls cardiolipin synthetase BCE_0694 150 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 42781021 Pathogen - hypothetical protein BCE_1952 1 None None None 42780044 Common - sulfate permease family protein BCE_0968 161 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 42780469 Pathogen - hypothetical protein BCE_1395 1 None None None 42784171 Common - ABC transporter, ATP-binding protein BCE_5125 249 COG1135 AbcC, ABC-type metal ion transport system, ATPase component Inorganic ion transport and metabolism 42780494 Common - hypothetical protein BCE_1420 2 None None None 42782503 Common - hydroxylamine reductase BCE_3450 74 COG1151 COG1151, 6Fe-6S prismane cluster-containing protein Energy production and conversion 42782823 Common ogt methylated-DNA--protein-cysteine S-methyltransferase BCE_3773 185 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 42780060 Common - N-acetylmuramoyl-L-alanine amidase, family 3 BCE_0984 171 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 42783646 Pathogen - hypothetical protein BCE_4600 1 None None None 42780244 Common hemY protoporphyrinogen oxidase BCE_1169 51 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 42780670 Common - spore maturation protein BCE_1596 39 COG0700 SpmB, Uncharacterized membrane protein Function unknown 42780254 Pathogen - hypothetical protein BCE_1179 1 None None None 42781450 Pathogen - hypothetical protein BCE_2387 1 None None None 42784055 Common - sensor histidine kinase BCE_5009 222 COG2205 KdpD, Osmosensitive K+ channel histidine kinase Signal transduction mechanisms 42782336 Common - hypothetical protein BCE_3283 50 COG4198 COG4198, Uncharacterized conserved protein Function unknown 42779457 Common - hypothetical protein BCE_0376 14 None None None 42780876 Common - sortase family protein BCE_1805 26 COG3764 SrtA, Sortase (surface protein transpeptidase) Cell envelope biogenesis, outer membrane 42782793 Common - hypothetical protein BCE_3743 26 COG3584 COG3584, Uncharacterized protein conserved in bacteria Function unknown 42782322 Common - ABC transporter, permease protein, putative BCE_3268 37 COG0577 SalY, ABC-type antimicrobial peptide transport system, permease component Defense mechanisms 42781388 Common - sensor histidine kinase BCE_2325 220 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779733 Common - molybdopterin oxidoreductase family protein BCE_0655 215 COG3383 COG3383, Uncharacterized anaerobic dehydrogenase General function prediction only 42780843 Common - hypothetical protein BCE_1770 3 None None None 42784190 Common - 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein BCE_5144 160 COG1250 FadB, 3-hydroxyacyl-CoA dehydrogenase Lipid metabolism 42782154 Pathogen - uridine kinase BCE_3098 1 None None None 42782917 Common tsf elongation factor Ts BCE_3867 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 42784065 Common cspD cold shock protein CspD BCE_5019 182 COG1278 CspC, Cold shock proteins Transcription 42784412 Common - hypothetical protein BCE_5367 2 None None None 42784418 Common - ABC transporter, ATP-binding protein BCE_5373 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 42781669 Common murE UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase BCE_2609 216 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 42782090 Common - amino acid permease family protein BCE_3034 146 COG0833 LysP, Amino acid transporters Amino acid transport and metabolism 42783815 Common - hypothetical protein BCE_4769 31 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42783717 Common - hypothetical protein BCE_4671 4 COG5386 COG5386, Cell surface protein Cell envelope biogenesis, outer membrane 42779109 Common tdk thymidylate kinase BCE_0028 231 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 42780446 Common - pyridine nucleotide-disulfide oxidoreductase, class I BCE_1372 246 COG0446 HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases General function prediction only 42781129 Common - polysaccharide deacetylase, putative BCE_2061 97 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 42782383 Common - IS231-related transposase BCE_3330 12 None None None 42782220 Pathogen - transcriptional regulator, MarR family BCE_3165 1 None None None 161511025 Common - tryptophanyl-tRNA synthetase BCE_3376 220 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42779298 Common - pyrroline-5-carboxylate reductase BCE_0217 213 COG0345 ProC, Pyrroline-5-carboxylate reductase Amino acid transport and metabolism 42781348 Pathogen - hypothetical protein BCE_2284 1 None None None 42783685 Common motB flagellar motor protein MotB BCE_4639 149 COG1360 MotB, Flagellar motor protein Cell motility and secretion 42782995 Common - hypothetical protein BCE_3947 15 COG1873 COG1873, Uncharacterized conserved protein Function unknown 42779095 Pathogen - hypothetical protein BCE_0014 1 None None None 42781376 Common - hypothetical protein BCE_2312 68 COG1434 COG1434, Uncharacterized conserved protein Function unknown 42781418 Pathogen - hypothetical protein BCE_2355 1 None None None 42779864 Common - hypothetical protein BCE_0787 5 COG0645 COG0645, Predicted kinase General function prediction only 42781890 Common - S-layer protein, putative BCE_2833 22 COG2333 ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) General function prediction only 42780429 Pathogen - hypothetical protein BCE_1355 1 None None None 42780582 Common - proton/glutamate symporter family protein BCE_1508 163 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 42782101 Common - uridine kinase BCE_3045 3 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 42784154 Common - hypothetical protein BCE_5108 29 COG3760 COG3760, Uncharacterized conserved protein Function unknown 42782365 Common - multidrug resistance protein, Smr family BCE_3312 140 COG2076 EmrE, Membrane transporters of cations and cationic drugs Inorganic ion transport and metabolism 42781929 Common - hypothetical protein BCE_2873 1 None None None 42782006 Pathogen - hypothetical protein BCE_2950 1 None None None 42781005 Common ilvC ketol-acid reductoisomerase BCE_1936 210 COG0059 IlvC, Ketol-acid reductoisomerase Amino acid transport and metabolism / Coenzyme metabolism 42781496 Pathogen - hypothetical protein BCE_2434 1 None None None 42779098 Common - isochorismatase family protein BCE_0017 95 COG1335 PncA, Amidases related to nicotinamidase Secondary metabolites biosynthesis, transport, and catabolism 42780528 Pathogen - hypothetical protein BCE_1454 1 None None None 42784397 Pathogen - hypothetical protein BCE_5352 1 None None None 42784257 Common tyrS tyrosyl-tRNA synthetase BCE_5211 218 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42780235 Common - hypothetical protein BCE_1160 33 COG3759 COG3759, Predicted membrane protein Function unknown 42780078 Common - oligopeptide ABC transporter, permease protein BCE_1002 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 42783030 Common - hypothetical protein BCE_3982 3 None None None 42781899 Common recQ ATP-dependent DNA helicase RecQ BCE_2842 235 COG0514 RecQ, Superfamily II DNA helicase DNA replication, recombination, and repair 42783793 Common - metal-dependent hydrolase BCE_4747 122 COG2220 COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold General function prediction only 42783024 Common coaD phosphopantetheine adenylyltransferase BCE_3976 208 COG0669 CoaD, Phosphopantetheine adenylyltransferase Coenzyme metabolism 42783279 Common bfmbAb 3-methyl-2-oxobutanoate dehydrogenase, beta subunit BCE_4233 219 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 42781980 Pathogen - hypothetical protein BCE_2924 1 None None None 42783094 Pathogen - hypothetical protein BCE_4047 1 None None None 42781521 Common - hypothetical protein BCE_2459 11 COG0010 SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family Amino acid transport and metabolism 42783599 Common hemB delta-aminolevulinic acid dehydratase BCE_4553 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 42783850 Common acuC acetoin utilization protein AcuC BCE_4804 162 COG0123 AcuC, Deacetylases, including yeast histone deacetylase and acetoin utilization protein Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism 42779950 Pathogen - hypothetical protein BCE_0874 1 None None None 42779695 Common - microbial collagenase,putative BCE_0616 34 COG3291 COG3291, FOG: PKD repeat General function prediction only 42783179 Common - hypothetical protein BCE_4132 12 COG4086 COG4086, Predicted secreted protein Function unknown 42779309 Pathogen - hypothetical protein BCE_0228 1 None None None 42783412 Common - ATP-dependent RNA helicase, DEAD/DEAH box family BCE_4366 240 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 42780791 Common - hypothetical protein BCE_1717 10 COG0328 RnhA, Ribonuclease HI DNA replication, recombination, and repair 42783477 Common - hypothetical protein BCE_4431 12 COG2259 COG2259, Predicted membrane protein Function unknown 42780514 Common - aminotransferase, class V BCE_1440 164 COG0075 COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase Amino acid transport and metabolism 42780162 Common sigB RNA polymerase sigma factor SigB BCE_1086 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 42779790 Common - hypothetical protein BCE_0712 36 COG1765 COG1765, Predicted redox protein, regulator of disulfide bond formation Posttranslational modification, protein turnover, chaperones 42781152 Pathogen - hypothetical protein BCE_2086 1 None None None 42784473 Common - hypothetical protein BCE_5428 11 COG5523 COG5523, Predicted integral membrane protein Function unknown 42779138 Common - hypothetical protein BCE_0057 9 None None None 42780923 Common - prolipoprotein diacylglyceryl transferase family protein BCE_1853 3 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 42781186 Common - hypothetical protein BCE_2120 69 COG0701 COG0701, Predicted permeases General function prediction only 42784497 Common - sua5/yciO/yrdC/ywlC family protein BCE_5452 240 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 42781411 Pathogen - hypothetical protein BCE_2348 1 None None None 42782097 Pathogen - lipoprotein, putative BCE_3041 1 None None None 42782633 Common - formate transporter, putative BCE_3583 93 COG2116 FocA, Formate/nitrite family of transporters Inorganic ion transport and metabolism 42781606 Common - transcriptional regulator, TetR family BCE_2545 121 COG1309 AcrR, Transcriptional regulator Transcription 42782062 Pathogen - hypothetical protein BCE_3006 1 None None None 42783694 Common trx thioredoxin BCE_4648 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 42781323 Common - hypothetical protein BCE_2259 3 COG4473 EcsB, Predicted ABC-type exoprotein transport system, permease component Intracellular trafficking and secretion 42783766 Common phoP DNA-binding response regulator PhoP BCE_4720 225 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 42781662 Common - hypothetical protein BCE_2602 5 None None None 42779622 Common - RNA methyltransferase, TrmA family BCE_0542 198 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 42784014 Common - sensory box histidine kinase BCE_4968 222 COG0642 BaeS, Signal transduction histidine kinase Signal transduction mechanisms 42779666 Common hemL glutamate-1-semialdehyde aminotransferase BCE_0586 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 42779364 Pathogen - hypothetical protein BCE_0283 1 None None None 42781464 Common dhbB isochorismatase BCE_2401 80 COG1535 EntB, Isochorismate hydrolase Secondary metabolites biosynthesis, transport, and catabolism 42780978 Common - hypothetical protein BCE_1909 127 COG2326 COG2326, Uncharacterized conserved protein Function unknown 42783106 Pathogen - hypothetical protein BCE_4059 1 None None None 42779577 Common - chitinase B BCE_0497 52 COG3325 ChiA, Chitinase Carbohydrate transport and metabolism 42784207 Common spoIIIJ OxaA-like protein precursor BCE_5161 215 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 42779275 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase BCE_0194 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 42781424 Pathogen - hypothetical protein BCE_2361 2 None None None 42781394 Common - acetylornithine deacetylase BCE_2331 207 COG0624 ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases Amino acid transport and metabolism 42784216 Common - dedA protein BCE_5170 100 COG0586 DedA, Uncharacterized membrane-associated protein Function unknown 42782671 Common nrdG anaerobic ribonucleoside-triphosphate reductase activating protein BCE_3621 74 COG0602 NrdG, Organic radical activating enzymes Posttranslational modification, protein turnover, chaperones 42784389 Common - hypothetical protein BCE_5344 6 None None None 42782516 Common - hypothetical protein BCE_3464 4 COG3238 COG3238, Uncharacterized protein conserved in bacteria Function unknown 42780397 Common - hypothetical protein BCE_1323 20 COG5295 Hia, Autotransporter adhesin Intracellular trafficking and secretion / Extracellular structures 42780896 Common - hypothetical protein BCE_1825 15 None None None 42783938 Common - conserved hypothetical protein TIGR01212 BCE_4892 81 COG1242 COG1242, Predicted Fe-S oxidoreductase General function prediction only 42781791 Common - endo/excinuclease amino terminal domain protein BCE_2734 16 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 42781443 Common - acyl-CoA dehydrogenase BCE_2380 165 COG1960 CaiA, Acyl-CoA dehydrogenases Lipid metabolism 42782900 Common - hypothetical protein BCE_3850 39 COG1550 COG1550, Uncharacterized protein conserved in bacteria Function unknown 42784077 Common - Subtilase family domain protein BCE_5031 119 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 42780101 Common - hypothetical protein BCE_1025 8 COG4997 COG4997, Uncharacterized conserved protein Function unknown 42783786 Common - hypothetical protein BCE_4740 3 None None None 42779342 Common - fumarylacetoacetate hydrolase family protein BCE_0261 174 COG0179 MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) Secondary metabolites biosynthesis, transport, and catabolism 42782750 Common - antibiotic ABC transporter, ATP-binding protein, putative BCE_3700 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 42784540 Common - hypothetical protein BCE_5495 84 COG1619 LdcA, Uncharacterized proteins, homologs of microcin C7 resistance protein MccF Defense mechanisms 42781569 Pathogen - hypothetical protein BCE_2507 1 None None None 42779248 Common - ABC-type bacteriocin transporter family protein BCE_0167 249 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 42780734 Common - hypothetical protein BCE_1660 25 COG1694 MazG, Predicted pyrophosphatase General function prediction only 42782714 Common ureA urease, gamma subunit BCE_3664 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 42781904 Pathogen - hypothetical protein BCE_2847 1 None None None 42781373 Pathogen - hypothetical protein BCE_2309 1 None None None 42781581 Pathogen - hypothetical protein BCE_2519 1 None None None 42783540 Common - cation efflux family protein BCE_4494 216 COG0053 MMT1, Predicted Co/Zn/Cd cation transporters Inorganic ion transport and metabolism 42782414 Common - hypothetical protein BCE_3361 3 None None None 42782014 Common ssuD alkanesulfonate monooxygenase BCE_2958 84 COG2141 COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Energy production and conversion 42783075 Common - cytochrome d ubiquinol oxidase, subunit II-related protein BCE_4028 4 None None None 42780045 Common - hypothetical protein BCE_0969 2 None None None 42780660 Common - site-specific recombinase, phage integrase family BCE_1586 98 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 42781484 Common - hydrolase, alpha/beta fold family BCE_2422 58 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 42782856 Common - hypothetical protein BCE_3806 233 COG0621 MiaB, 2-methylthioadenine synthetase Translation, ribosomal structure and biogenesis 42781491 Common - hypothetical protein BCE_2429 10 COG4859 COG4859, Uncharacterized protein conserved in bacteria Function unknown 42780201 Common glpK glycerol kinase BCE_1125 179 COG0554 GlpK, Glycerol kinase Energy production and conversion 42779265 Common - Tn7-like transposition protein C BCE_0184 18 None None None 42779362 Common rimI ribosomal-protein-alanine acetyltransferase BCE_0281 209 COG0456 RimI, Acetyltransferases General function prediction only 42779485 Common - phage protein, HK97 gp10 family BCE_0404 5 None None None 42780655 Pathogen - hypothetical protein BCE_1580 1 None None None 42782045 Common - hypothetical protein BCE_2989 3 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 42782345 Common - beta-lactam antibiotic acylase family protein BCE_3292 80 COG2366 COG2366, Protein related to penicillin acylase General function prediction only 42782449 Common - dTDP-glucose 4,6-dehydratase, putative BCE_3396 226 COG0451 WcaG, Nucleoside-diphosphate-sugar epimerases Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism 42783532 Common hisS histidyl-tRNA synthetase BCE_4486 249 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 42784480 Common atpE F0F1 ATP synthase subunit C BCE_5435 28 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 42782565 Common - glycerophosphoryl diester phosphodiesterase, putative BCE_3514 158 COG0584 UgpQ, Glycerophosphoryl diester phosphodiesterase Energy production and conversion 42780686 Common - lysM domain protein BCE_1612 2 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 42782718 Common - hypothetical protein BCE_3668 48 COG1284 COG1284, Uncharacterized conserved protein Function unknown 42781274 Pathogen - hypothetical protein BCE_2209 1 None None None 42784317 Common uvrA excinuclease ABC subunit A BCE_5271 244 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 42783569 Common - hypothetical protein BCE_4523 9 COG2267 PldB, Lysophospholipase Lipid metabolism 42781059 Pathogen - hypothetical protein BCE_1990 1 None None None 42782120 Common - hypothetical transcriptional regulator in uvrx-ilva intergenic region, putative BCE_3064 72 COG1846 MarR, Transcriptional regulators Transcription 42780137 Common - hypothetical protein BCE_1061 21 COG4644 COG4644, Transposase and inactivated derivatives, TnpA family DNA replication, recombination, and repair 42781706 Pathogen - hypothetical protein BCE_2647 1 None None None 42783185 Common spoVAA stage V sporulation protein AA BCE_4139 4 None None None 42784282 Common - holin-like protein BCE_5236 32 COG1380 COG1380, Putative effector of murein hydrolase LrgA General function prediction only 42782253 Common - 1,4-dihydroxy-2-naphthoate octaprenyltransferase BCE_3198 112 COG1575 MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase Coenzyme metabolism 42780991 Common - polysaccharide biosynthesis family protein BCE_1922 52 COG2244 RfbX, Membrane protein involved in the export of O-antigen and teichoic acid General function prediction only 42779839 Common - hypothetical protein BCE_0761 7 None None None 42780712 Common folE GTP cyclohydrolase I BCE_1638 177 COG0302 FolE, GTP cyclohydrolase I Coenzyme metabolism 42781076 Common ldh L-lactate dehydrogenase BCE_2007 171 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 42779100 Common - cytidine/deoxycytidylate deaminase zinc-binding domain protein BCE_0019 215 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 42779346 Common ddl D-alanyl-alanine synthetase A BCE_0265 217 COG1181 DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes Cell envelope biogenesis, outer membrane 42779554 Common arcD arginine/ornithine antiporter BCE_0474 84 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 42781654 Common - oligoendopeptidase, putative BCE_2593 84 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 42780332 Common - hypothetical protein BCE_1258 2 None None None 42784544 Pathogen - hypothetical protein BCE_5499 1 None None None 42779596 Common - tellurium resistance protein, putative BCE_0516 123 COG0861 TerC, Membrane protein TerC, possibly involved in tellurium resistance Inorganic ion transport and metabolism 42779849 Common qoxB quinol oxidase, subunit I BCE_0771 165 COG0843 CyoB, Heme/copper-type cytochrome/quinol oxidases, subunit 1 Energy production and conversion 42781755 Pathogen - hypothetical protein BCE_2697 1 None None None 42779349 Common uvsE putative UV damage endonuclease BCE_0268 24 COG4294 Uve, UV damage repair endonuclease DNA replication, recombination, and repair 42779528 Common - hypothetical protein BCE_0447 2 None None None 42782730 Common hutH histidine ammonia-lyase BCE_3680 110 COG2986 HutH, Histidine ammonia-lyase Amino acid transport and metabolism 42782183 Pathogen - hypothetical protein BCE_3128 1 None None None 42783502 Common - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase BCE_4456 94 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 42783052 Pathogen - hypothetical protein BCE_4004 1 None None None 42780266 Pathogen - lipoprotein, putative BCE_1191 1 None None None