Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome NC_002162 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 13357764 Common plsX fatty acid/phospholipid synthesis protein UU206 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 13357967 Pathogen - hypothetical protein UU405.1 2 None None None 13358125 Common oppC oligopeptide transport system permease protein UU561 218 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 13357980 Common thiI thiamin biosynthesis protein UU418 95 COG0301 ThiI, Thiamine biosynthesis ATP pyrophosphatase Coenzyme metabolism 13357741 Pathogen - hypothetical protein UU183 1 None None None 13358011 Common ruvB Holliday junction DNA helicase B UU448 215 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 13357823 Pathogen - unique hypothetical membrane lipoprotein UU263 1 None None None 13357630 Common trxB thioredoxin reductase UU074 245 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 13358097 Common rpmG 50S ribosomal protein L33 UU533 58 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 13358103 Common ABC-5 ABC transporter UU539 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 13357637 Common gyrB DNA gyrase subunit B UU081 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 13357989 Pathogen - hypothetical protein UU426 2 None None None 13358041 Pathogen - hypothetical protein UU478 2 None None None 13357603 Pathogen - conserved hypothetical ATP/GTP-binding protein UU047 2 None None None 13357786 Pathogen - conserved hypothetical membrane lipoprotein UU226 3 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 13358090 Common - MBA N-terminal paralog UU526 9 COG2503 COG2503, Predicted secreted acid phosphatase General function prediction only 13358153 Common cls cardiolipin synthase UU588 150 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 13357930 Common - hypothetical protein UU370 24 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 13357774 Common ptc1 protein phosphatase UU215 120 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 13358087 Common fusA translation elongation factor G UU523 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 13357793 Common rplW 50S ribosomal protein L23 UU233 11 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 13357709 Pathogen - hypothetical protein UU152 1 None None None 13357907 Common tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) UU347 203 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 13357898 Pathogen - hypothetical protein UU338 2 None None None 13358149 Common dinF-2 DNA damage inducible protein - MATE transporter family UU584 16 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 13357873 Common rluD pseudouridine synthase (uracil hydrolase) UU313 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 13358142 Common rplM 50S ribosomal protein L13 UU577 220 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 13357716 Pathogen - hypothetical protein UU159 1 None None None 13358077 Common pyrH uridylate kinase UU513 241 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 13357964 Pathogen - hypothetical protein UU403 2 None None None 13357752 Common - hypothetical protein UU194 21 COG1658 COG1658, Small primase-like proteins (Toprim domain) DNA replication, recombination, and repair 13357848 Pathogen - hypothetical protein UU288 1 None None None 13358010 Common hsdS-5 type I restriction enzyme S protein (fragment) UU447 8 None None None 13358033 Common pfs purine nucleoside phosphorylase UU470 58 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 13358056 Common glyS glycyl-tRNA synthetase UU493 87 COG0423 GRS1, Glycyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 13358063 Common - hypothetical protein UU500 81 COG1692 COG1692, Uncharacterized protein conserved in bacteria Function unknown 13357679 Pathogen - hypothetical protein UU122 2 None None None 13358099 Common - hypothetical protein UU535 15 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 13357663 Common serS seryl-tRNA synthetase UU106 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357880 Common infB translation initiation factor IF-2 UU320 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 13357568 Common - unique hypothetical membrane lipoprotein UU012 6 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 13357695 Pathogen - conserved hypothetical - cytochrome b UU138 1 COG5000 NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Signal transduction mechanisms 13357564 Pathogen - hypothetical protein UU008 1 None None None 13358084 Common - hypothetical protein UU520 2 None None None 13357657 Common hsdM-2 type I restriction enzyme M protein (fragment) UU100 44 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 13357927 Common - hypothetical protein UU367 9 COG4487 COG4487, Uncharacterized protein conserved in bacteria Function unknown 13357889 Common - hypothetical protein UU329 3 COG3846 TrbL, Type IV secretory pathway, TrbL components Intracellular trafficking and secretion 13357858 Common efp elongation factor P UU298 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 13357582 Common rpsB 30S ribosomal protein S2 UU026 248 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 13358024 Common obgE GTPase ObgE UU461 249 COG0536 Obg, Predicted GTPase General function prediction only 13357648 Common ffh signal recognition particle UU091 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 13357807 Common rplR 50S ribosomal protein L18 UU247 212 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 13358130 Common - hypothetical protein UU565 5 COG1284 COG1284, Uncharacterized conserved protein Function unknown 13358156 Common - hypothetical protein UU591 3 COG0758 Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake DNA replication, recombination, and repair / Intracellular trafficking and secretion 13357727 Pathogen - unique hypothetical ATP/GTP-binding protein UU169 4 COG1783 XtmB, Phage terminase large subunit General function prediction only 13357687 Common atpG F0F1 ATP synthase subunit gamma UU130 208 COG0224 AtpG, F0F1-type ATP synthase, gamma subunit Energy production and conversion 13357705 Pathogen - hypothetical protein UU148 1 None None None 13357812 Common map methionine aminopeptidase (map) UU252 248 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 13357615 Common msbA-1 transport ATP-binding protein UU059 229 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 13357833 Pathogen - hypothetical protein UU273 1 None None None 13357670 Common sfhB pseudouridine synthase (uracil hydrolase) UU113 209 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 13357700 Common - hypothetical protein UU143 22 None None None 13357559 Common dnaA chromosomal replication initiator protein UU001 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 13357999 Common hlyA hemolysin UU436 130 COG1189 COG1189, Predicted rRNA methylase Translation, ribosomal structure and biogenesis 13357910 Common - hypothetical protein UU350 29 COG2384 COG2384, Predicted SAM-dependent methyltransferase General function prediction only 13358003 Common - unique hypothetical membrane lipoprotein UU440 10 None None None 13357604 Pathogen - hypothetical protein UU048 2 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 13358089 Common rpsL 30S ribosomal protein S12 UU525 230 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 13357996 Common ureB urease complex component UU433 96 COG0832 UreB, Urea amidohydrolase (urease) beta subunit Amino acid transport and metabolism 13357598 Pathogen - hypothetical protein UU042 1 COG4095 COG4095, Uncharacterized conserved protein Function unknown 13357868 Common - hypothetical protein UU308 5 COG3611 DnaB, Replication initiation/membrane attachment protein DNA replication, recombination, and repair 13358095 Common cdd cytidine deaminase UU531 110 COG0295 Cdd, Cytidine deaminase Nucleotide transport and metabolism 13357943 Common gpsA NAD+ dependent glycerol-3-phosphate dehydrogenase UU382 209 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 13357720 Pathogen - unique hypothetical ATP/GTP-binding protein UU163 1 None None None 13357835 Pathogen - unique hypothetical membrane lipoprotein UU275 1 None None None 13358049 Pathogen mnuA-2 membrane nuclease A - hypothetical UU486 2 COG2374 COG2374, Predicted extracellular nuclease General function prediction only 13357788 Common rpL35 ribosomal protein L35 UU228 77 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 13357759 Common - hypothetical protein UU201 7 COG0704 PhoU, Phosphate uptake regulator Inorganic ion transport and metabolism 13357781 Common xerC integrase-recombinase protein UU222 158 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 13357851 Common bsaA glutathione peroxidase UU291 112 COG0386 BtuE, Glutathione peroxidase Posttranslational modification, protein turnover, chaperones 13357743 Common pfkA 6-phosphofructokinase UU185 133 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 13357934 Pathogen - hypothetical protein UU374 1 None None None 13357825 Common - hypothetical protein UU265 16 COG3763 COG3763, Uncharacterized protein conserved in bacteria Function unknown 13357632 Common hprK HPr kinase/phosphorylase UU076 68 COG1493 HprK, Serine kinase of the HPr protein, regulates carbohydrate metabolism Signal transduction mechanisms 13357945 Pathogen - conserved hypothetical membrane lipoprotein UU384 2 None None None 13357843 Common spoT/relA ppGpp 3'-pyrophosphohydrolase UU283 206 COG0317 SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases Signal transduction mechanisms / Transcription 13358124 Common oppD oligopeptide transport system permease protein UU560 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 13357639 Common - hypothetical protein UU083 193 COG1546 CinA, Uncharacterized protein (competence- and mitomycin-induced) General function prediction only 13358131 Common rplS 50S ribosomal protein L19 UU566 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 13357790 Common rpsJ 30S ribosomal protein S10 UU230 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 13358075 Common cdsA CDP-diglyceride synthetase UU511 214 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 13357962 Pathogen ABCsbp-7 putative ABC substrate-binding protein - iron UU401 1 None None None 13358116 Common rpS18 ribosomal protein S18 UU552 214 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 13357915 Common ribF riboflavin kinase/FAD synthetase UU355 210 COG0196 RibF, FAD synthase Coenzyme metabolism 13358035 Pathogen - hypothetical protein UU472 1 None None None 13357841 Common deoD purine-nucleoside phosphorylase UU281 83 COG0813 DeoD, Purine-nucleoside phosphorylase Nucleotide transport and metabolism 13357900 Common - hypothetical protein UU340 10 COG1881 COG1881, Phospholipid-binding protein General function prediction only 13358028 Common def peptide deformylase UU465 151 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 13357628 Common hlyC hemolysin UU072 210 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 13357762 Common rpsO 30S ribosomal protein S15 UU204 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 13357795 Common rpS19 ribosomal protein S19 UU235 246 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 13357909 Common rpoD RNA polymerase sigma factor RpoD UU349 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 13358144 Common - conserved hypothetical membrane lipoprotein UU579 3 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 13357871 Common ard1 N-acetyltransferase complex, probable ribosomal protein-alanine-acetyltransferase subunit UU311 57 COG0456 RimI, Acetyltransferases General function prediction only 13357732 Common - hypothetical protein UU174 105 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 13357987 Pathogen - hypothetical protein UU424.1 1 None None None 13357885 Common - hypothetical protein UU325 114 COG1704 LemA, Uncharacterized conserved protein Function unknown 13358101 Common - hypothetical protein UU537 66 COG0619 CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters Inorganic ion transport and metabolism 13357659 Common uvrA excinuclease ABC subunit A UU102 248 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 13358082 Common - hypothetical protein UU518 5 None None None 13357800 Common rpsQ 30S ribosomal protein S17 UU240 219 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 13357566 Common rplJ 50S ribosomal protein L10 UU010 186 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 13357650 Common bcrA ABC transporter UU093 249 COG1131 CcmA, ABC-type multidrug transport system, ATPase component Defense mechanisms 13357887 Common spoU-3 rRNA methylase UU327 126 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 13357646 Common - hypothetical protein UU089.1 5 None None None 13357580 Pathogen ABCsbp-1 putative ABC substrate-binding protein - iron UU024 1 None None None 13357929 Common alaS alanyl-tRNA synthetase UU369 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13358158 Pathogen - hypothetical protein UU593 1 None None None 13358000 Common - hypothetical protein UU437 186 COG0389 DinP, Nucleotidyltransferase/DNA polymerase involved in DNA repair DNA replication, recombination, and repair 13357714 Pathogen - hypothetical protein UU157 1 None None None 13358171 Common - hypothetical protein UU005m 101 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 13358145 Pathogen - hypothetical protein UU580 1 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 13357978 Pathogen - hypothetical protein UU416 1 None None None 13357572 Common - hypothetical membrane lipoprotein UU016 10 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 13357579 Common fatD-1 ferrichrome ABC transporter UU023 163 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357827 Common valS valyl-tRNA synthetase UU267 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357641 Common - hypothetical protein UU085 76 COG1418 COG1418, Predicted HD superfamily hydrolase General function prediction only 13357665 Common potB spermidine/putrescine transport system permease UU108 155 COG1176 PotB, ABC-type spermidine/putrescine transport system, permease component I Amino acid transport and metabolism 13357994 Common ureE urease complex component UU431 17 COG2371 UreE, Urease accessory protein UreE Posttranslational modification, protein turnover, chaperones 13357973 Common gcp O-sialoglycoprotein endopeptidase UU411 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 13358009 Common hsdS-4 type I restriction enzyme S protein (fragment) UU446 22 None None None 13358167 Common - putative inner membrane protein translocase component YidC UU602 33 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 13357866 Common nfo endonuclease IV UU306 102 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 13357955 Pathogen - hypothetical protein UU394 1 COG3599 DivIVA, Cell division initiation protein Cell division and chromosome partitioning 13357896 Pathogen - hypothetical protein UU336 2 None None None 13357625 Common fecE iron(III) dicitrate transport ATP-binding protein UU069 249 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 13357725 Pathogen - hypothetical protein UU167 1 None None None 13357591 Pathogen - hypothetical protein UU035 2 None None None 13357912 Pathogen - hypothetical protein UU352 1 None None None 13357809 Common rplO 50S ribosomal protein L15 UU249 216 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 13358107 Common - hypothetical protein UU543 4 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 13357592 Common - hypothetical protein UU036 33 COG1002 COG1002, Type II restriction enzyme, methylase subunits Defense mechanisms 13358100 Common truA tRNA pseudouridine synthase A UU536 233 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 13357693 Common atpE ATP synthase C chain UU136 88 COG0636 AtpE, F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K Energy production and conversion 13357677 Common uvrB excinuclease ABC subunit B UU120 226 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 13358160 Common gtp1 translation-associated GTPase UU595 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 13358013 Common - hypothetical protein UU450 6 COG0392 COG0392, Predicted integral membrane protein Function unknown 13358061 Common rpsD 30S ribosomal protein S4 UU498 241 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 13357837 Pathogen rpsU 30S ribosomal protein S21 UU277 2 None None None 13358054 Common era GTP-binding protein UU491 224 COG1159 Era, GTPase General function prediction only 13357729 Pathogen - hypothetical protein UU171 1 None None None 13357814 Common rpL36 ribosomal protein L36 UU254 133 COG0257 RpmJ, Ribosomal protein L36 Translation, ribosomal structure and biogenesis 13357707 Pathogen - hypothetical protein UU150 1 None None None 13357680 Common cysS cysteinyl-tRNA synthetase UU123 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357689 Common atpA-2 ATP synthase subunit A UU132 247 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 13357619 Pathogen - hypothetical protein UU063 1 COG3613 COG3613, Nucleoside 2-deoxyribosyltransferase Nucleotide transport and metabolism 13357624 Common - hypothetical protein UU068 3 None None None 13357606 Pathogen - hypothetical protein UU050 2 None None None 13357903 Pathogen - hypothetical protein UU343 1 None None None 13357960 Common hmuU-2 hemin permease UU399 153 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357951 Pathogen - hypothetical protein UU390 2 None None None 13357581 Common fecC ferrichrome ABC transporter UU025 151 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357681 Common spoU-1 rRNA methylase UU124 215 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 13357957 Pathogen - hypothetical protein UU396 1 None None None 13357894 Pathogen - hypothetical protein UU334 1 None None None 13357699 Common - hypothetical protein UU142 24 COG2739 COG2739, Uncharacterized protein conserved in bacteria Function unknown 13358074 Pathogen - hypothetical protein UU510.1 1 None None None 13358047 Common ackA acetate kinase UU484 161 COG0282 ackA, Acetate kinase Energy production and conversion 13358118 Common rpsF 30S ribosomal protein S6 UU554 28 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 13357666 Common potC spermidine/putrescine transport system permease UU109 133 COG1177 PotC, ABC-type spermidine/putrescine transport system, permease component II Amino acid transport and metabolism 13357820 Pathogen - unique hypothetical membrane lipoprotein UU260 2 None None None 13358036 Pathogen - hypothetical protein UU473 2 None None None 13358015 Common proS prolyl-tRNA synthetase UU452 197 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13358046 Pathogen - MBA N-terminal paralog UU483 3 None None None 13357838 Common argS arginyl-tRNA synthetase UU278 246 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357817 Common rpoA DNA-directed RNA polymerase subunit alpha UU257 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 13357947 Common - hypothetical protein UU386 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 13357767 Pathogen - hypothetical protein UU209 2 None None None 13357734 Common - hypothetical protein UU176 10 COG1393 ArsC, Arsenate reductase and related proteins, glutaredoxin family Inorganic ion transport and metabolism 13358148 Common dinF-1 DNA damage inducible protein - MATE transporter family UU583 37 COG0534 NorM, Na+-driven multidrug efflux pump Defense mechanisms 13357760 Pathogen - hypothetical protein UU202 1 COG2608 CopZ, Copper chaperone Inorganic ion transport and metabolism 13357612 Common secG preprotein translocase subunit SecG UU056 3 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 13358022 Pathogen - hypothetical protein UU459 1 None None None 13358007 Pathogen - hypothetical protein UU444 1 None None None 13357674 Common tyrS tyrosyl tRNA synthetase UU117 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357878 Common nusA transcription elongation factor NusA UU318 216 COG0195 NusA, Transcription elongation factor Transcription 13358112 Common ung uracil-DNA glycosylase UU548 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 13357845 Common hisS histidyl-tRNA synthetase UU285 245 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357778 Common amt-2 ammonium transporter UU219 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 13357771 Common rplU 50S ribosomal protein L21 UU212 190 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 13357574 Common trmE tRNA modification GTPase TrmE UU018 214 COG0486 ThdF, Predicted GTPase General function prediction only 13357782 Common xasA amino acid antiporter UU223 27 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 13358169 Common rpmH 50S ribosomal protein L34 UU604 196 COG0230 RpmH, Ribosomal protein L34 Translation, ribosomal structure and biogenesis 13357683 Pathogen - hypothetical protein UU126 2 None None None 13357884 Common lepA GTP-binding protein LepA UU324 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 13357690 Common atpH-1 ATP synthase delta chain C-term UU133 26 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 13357971 Pathogen - hypothetical membrane lipoprotein UU409 2 None None None 13357702 Common ripX integrase-recombinase protein UU145 103 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 13357863 Pathogen - hypothetical protein UU303 1 None None None 13357993 Common ureF urease complex component UU430 45 COG0830 UreF, Urease accessory protein UreF Posttranslational modification, protein turnover, chaperones 13357756 Common - hypothetical protein UU198 12 COG0226 PstS, ABC-type phosphate transport system, periplasmic component Inorganic ion transport and metabolism 13358091 Common - hypothetical protein UU527 47 COG1479 COG1479, Uncharacterized conserved protein Function unknown 13357609 Common atpA-1 F0F1 ATP synthase subunit alpha UU053 245 COG0056 AtpA, F0F1-type ATP synthase, alpha subunit Energy production and conversion 13358029 Common parE/gyrB DNA topoisomerase IV subunit B UU466 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 13357746 Common rpoC DNA-directed RNA polymerase subunit beta' UU188 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 13357916 Pathogen - unique hypothetical ATP/GTP-binding protein UU356 1 None None None 13358136 Common - conserved hypothetical ATP/GTP-binding protein UU571 75 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 13357600 Pathogen - hypothetical protein UU044 2 COG3115 ZipA, Cell division protein Cell division and chromosome partitioning 13357593 Pathogen - hypothetical protein UU037 2 None None None 13357924 Common psgA phosphatidylglycerophosphate synthase UU364 159 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 13357634 Common pth peptidyl-tRNA hydrolase UU078 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 13358133 Common rpS16 ribosomal protein S16 UU568 191 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 13357963 Common trmU tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase UU402 212 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 13357804 Common rpsN 30S ribosomal protein S14 UU244 163 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 13357802 Common rpL24 ribosomal protein L24 UU242 207 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 13357561 Common prfA peptide chain release factor 1 UU003 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 13358170 Common hemK hypothetical protein UU004m 178 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 13357644 Common - hypothetical protein UU088 36 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 13357587 Pathogen - unique hypothetical membrane lipoprotein UU031 1 None None None 13358162 Common rpoE DNA-directed RNA polymerase subunit delta UU597 7 COG3343 RpoE, DNA-directed RNA polymerase, delta subunit Transcription 13357652 Common hsdR type I restriction enzyme R protein UU095 125 COG0610 COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases Defense mechanisms 13358031 Common - conserved hypothetical ATP/GTP-binding protein UU468 23 COG1161 COG1161, Predicted GTPases General function prediction only 13358072 Common - conserved hypothetical ATP/GTP-binding protein UU509 113 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 13357958 Common rnhB ribonuclease HII UU397 34 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 13357754 Common - recombination factor protein RarA UU196 239 COG2256 MGS1, ATPase related to the helicase subunit of the Holliday junction resolvase DNA replication, recombination, and repair 13357668 Pathogen - hypothetical protein UU111 1 None None None 13357711 Pathogen - hypothetical protein UU154 2 None None None 13357919 Pathogen ABCsbp-5 putative ABC substrate-binding protein - iron UU359 1 None None None 13358038 Common - hypothetical protein UU475 39 None None None 13357718 Pathogen - hypothetical protein UU161 1 None None None 13357905 Common - hypothetical protein UU345 135 COG1354 COG1354, Uncharacterized conserved protein Function unknown 13358058 Common - unique hypothetical membrane lipoprotein UU495 6 None None None 13358127 Pathogen - hypothetical protein UU563 1 None None None 13357642 Common dgk deoxyguanosine kinase UU086 19 COG1428 COG1428, Deoxynucleoside kinases Nucleotide transport and metabolism 13357953 Common - hypothetical protein UU392 3 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 13357983 Common hrcA heat-inducible transcription repressor UU421 144 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 13358020 Common pheT phenylalanyl-tRNA synthetase subunit beta UU457 220 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 13357933 Pathogen - hypothetical protein UU373 1 None None None 13358070 Common ampL leucyl aminopeptidase UU507 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 13357672 Common gph phosphoglycolate phosphatase UU115 67 COG0546 Gph, Predicted phosphatases General function prediction only 13357829 Common - hypothetical protein UU269 173 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 13357784 Pathogen - unique hypothetical membrane lipoprotein UU225 1 None None None 13357588 Pathogen - hypothetical protein UU032 1 None None None 13358086 Common tuf elongation factor Tu UU522 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 13357577 Common lip3 triacylglycerol lipase UU021 50 COG0596 MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) General function prediction only 13358068 Pathogen - hypothetical protein UU505 1 None None None 13358114 Common dnaB replicative DNA helicase UU550 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 13357876 Pathogen - hypothetical protein UU316 1 None None None 13357723 Pathogen - hypothetical protein UU165.2 1 None None None 13357937 Common polC DNA polymerase III PolC UU377 179 COG2176 PolC, DNA polymerase III, alpha subunit (gram-positive type) DNA replication, recombination, and repair 13358165 Common - hypothetical protein UU600 23 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 13358121 Common - unique hypothetical membrane lipoprotein UU557 9 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 13358004 Pathogen - hypothetical protein UU441 2 COG1404 AprE, Subtilisin-like serine proteases Posttranslational modification, protein turnover, chaperones 13357949 Pathogen - hypothetical protein UU388 4 COG4823 AbiF, Abortive infection bacteriophage resistance protein Defense mechanisms 13357920 Pathogen ABCsbp-6 putative ABC substrate-binding protein - iron UU360 1 None None None 13357706 Pathogen - hypothetical protein UU149 1 None None None 13358044 Pathogen - hypothetical protein UU481 2 None None None 13358017 Common nifS nitrogen fixation protein - class-V pyridoxal-phosphate aminotransferase UU454 238 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 13357719 Pathogen - hypothetical protein UU162 1 None None None 13357822 Common - hypothetical protein UU262 132 COG1739 COG1739, Uncharacterized conserved protein Function unknown 13357938 Pathogen - unique hypothetical membrane lipoprotein UU378 1 None None None 13357769 Common rpmA 50S ribosomal protein L27 UU210 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 13358120 Pathogen - hypothetical protein UU556 1 None None None 13357969 Common dnaJ heat shock protein UU407 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 13357610 Common atpD-1 F0F1 ATP synthase subunit beta UU054 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 13357765 Common - hypothetical protein UU207 50 COG1461 COG1461, Predicted kinase related to dihydroxyacetone kinase General function prediction only 13357596 Common gidB glucose inhibited division protein B UU040 193 COG0357 GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division Cell envelope biogenesis, outer membrane 13357854 Pathogen - hypothetical protein UU294 1 None None None 13358093 Common codV integrase-recombinase protein UU529 207 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 13357721 Pathogen - hypothetical protein UU164 1 None None None 13357748 Common - hypothetical protein UU190 15 COG1307 DegV, Uncharacterized protein conserved in bacteria Function unknown 13357636 Common - hypothetical protein UU080 26 COG2501 COG2501, Uncharacterized conserved protein Function unknown 13357621 Common pepF-1 oligoendopeptidase F - zinc metalloprotease UU065 84 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 13357856 Pathogen - hypothetical protein UU296 1 None None None 13357595 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA UU039 193 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 13358152 Common ptsH phosphohistidinoprotein-hexose phosphotransferase UU587 80 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 13358138 Common kch potassium channel protein UU573 37 None None None 13357810 Common secY preprotein translocase subunit SecY UU250 244 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 13357685 Common atpC ATP synthase epsilon chain UU128 5 COG0355 AtpC, F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) Energy production and conversion 13357704 Pathogen - hypothetical protein UU147 1 None None None 13357697 Common p115 p115 protein UU140 180 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 13357892 Common udk uridine kinase UU332 102 COG0572 Udk, Uridine kinase Nucleotide transport and metabolism 13357991 Common ureD urease complex component UU428 30 COG0829 UreH, Urease accessory protein UreH Posttranslational modification, protein turnover, chaperones 13358027 Pathogen - hypothetical protein UU464 2 None None None 13357654 Common hsdS-2 type I restriction enzyme S protein (fragment) UU097 17 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 13357563 Pathogen - hypothetical protein UU007 1 COG4536 CorB, Putative Mg2+ and Co2+ transporter CorB Inorganic ion transport and metabolism 13358164 Common gltX glutamyl-tRNA synthetase UU599 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 13357791 Common rplC 50S ribosomal protein L3 UU231 224 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 13357602 Pathogen - hypothetical protein UU046 2 COG0810 TonB, Periplasmic protein TonB, links inner and outer membranes Cell envelope biogenesis, outer membrane 13357736 Common - hypothetical protein UU178 5 COG1264 PtsG, Phosphotransferase system IIB components Carbohydrate transport and metabolism 13357739 Common tpiA triosephosphate isomerase UU181 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 13357585 Common - hypothetical protein UU029 138 COG2183 Tex, Transcriptional accessory protein Transcription 13357861 Common - hypothetical protein UU301 127 COG1385 COG1385, Uncharacterized protein conserved in bacteria Function unknown 13358159 Common tdk thymidine kinase UU594 96 COG1435 Tdk, Thymidine kinase Nucleotide transport and metabolism 13357882 Pathogen - unique hypothetical membrane lipoprotein UU322 2 None None None 13357806 Common rplF 50S ribosomal protein L6 UU246 217 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 13357661 Common hpt hypoxanthine-guanine phosphoribosyltransferase UU104 153 COG0634 Hpt, Hypoxanthine-guanine phosphoribosyltransferase Nucleotide transport and metabolism 13357977 Common dnaE DNA polymerase III DnaE UU415 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 13357831 Common - hypothetical protein UU271 5 None None None 13357819 Common - hypothetical protein UU259 4 None None None 13357708 Pathogen - hypothetical protein UU151 1 None None None 13357874 Pathogen lspA conserved hypothetical protein (possible signal peptidase II - lspA) UU314 2 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 13357972 Common ileS isoleucyl-tRNA synthetase UU410 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357862 Pathogen - hypothetical protein UU302 1 None None None 13357597 Pathogen - hypothetical protein UU041 2 COG4095 COG4095, Uncharacterized conserved protein Function unknown 13357640 Common recA recombinase A UU084 244 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 13357662 Common ftsH ATP-dependent zinc metallopeptidase - cell division protein UU105 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 13358025 Pathogen - hypothetical protein UU462 2 None None None 13358168 Common rnpA ribonuclease p - protein component UU603 13 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 13358155 Common topA DNA topoisomerase I UU590 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 13357849 Common msrA methionine sulfoxide reductase A UU289 205 COG0225 MsrA, Peptide methionine sulfoxide reductase Posttranslational modification, protein turnover, chaperones 13357926 Pathogen - hypothetical protein UU366 1 None None None 13357570 Common rbsC-1 ribose/galactose ABC transporter (N-term domain) UU014 108 COG4603 COG4603, ABC-type uncharacterized transport system, permease component General function prediction only 13357738 Common - hypothetical protein UU180 164 COG1576 COG1576, Uncharacterized conserved protein Function unknown 13357569 Common rbsC-2 ribose/galactose ABC transporter UU013 100 COG1079 COG1079, Uncharacterized ABC-type transport system, permease component General function prediction only 13357565 Common mgtE Mg2+ ion transporter UU009 165 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 13357811 Common adk adenylate kinase UU251 230 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 13357694 Common atpB F0F1 ATP synthase subunit A UU137 111 COG0356 AtpB, F0F1-type ATP synthase, subunit a Energy production and conversion 13357832 Common hit probable HIT protein UU272 227 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 13357850 Common - hypothetical protein UU290 8 COG1309 AcrR, Transcriptional regulator Transcription 13357897 Common folD methylenetetrahydrofolate dehydrogenase UU337 117 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 13358096 Common pepP XAA-PRO aminopeptidase UU532 244 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 13357728 Pathogen - hypothetical protein UU170 1 None None None 13357614 Common smpB SsrA-binding protein UU058 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 13358019 Common rpe d-ribulose-5-phosphate 3 epimerase UU456 163 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 13357867 Common - conserved hypothetical ATP/GTP-binding protein UU307 3 COG1484 DnaC, DNA replication protein DNA replication, recombination, and repair 13357562 Common lacA galactoside O-acetyltransferase UU006 127 COG0698 RpiB, Ribose 5-phosphate isomerase RpiB Carbohydrate transport and metabolism 13358012 Common ruvA holliday-junction binding protein UU449 19 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 13357998 Common fhuC ferrichrome transport ATP-binding protein UU435 247 COG1120 FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Inorganic ion transport and metabolism / Coenzyme metabolism 13357911 Common - hypothetical protein UU351 21 COG0327 COG0327, Uncharacterized conserved protein Function unknown 13357859 Pathogen - hypothetical protein UU299 1 None None None 13358002 Pathogen - hypothetical protein UU439 1 None None None 13357753 Common - hypothetical protein UU195 209 COG0313 COG0313, Predicted methyltransferases General function prediction only 13358042 Common - hypothetical protein UU479 8 None None None 13357966 Common - hypothetical protein UU405 167 COG0344 COG0344, Predicted membrane protein Function unknown 13357942 Common uvrC excinuclease ABC subunit C UU381 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 13357796 Common rpL22 ribosomal protein L22 UU236 217 COG4933 COG4933, Uncharacterized conserved protein Function unknown 13357890 Pathogen - hypothetical protein UU330 2 COG3275 LytS, Putative regulator of cell autolysis Signal transduction mechanisms 13357742 Common eno enolase UU184 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 13357824 Common pacL cation-transporting P-type ATPase UU264 231 COG0474 MgtA, Cation transport ATPase Inorganic ion transport and metabolism 13357731 Common - hypothetical protein UU173 12 None None None 13357931 Common leuS leucyl-tRNA synthetase UU371 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357780 Common fthS formate-tetrahydrofolate ligase UU221 89 COG2759 MIS1, Formyltetrahydrofolate synthetase Nucleotide transport and metabolism 13357638 Common gyrA DNA gyrase subunit A UU082 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 13358076 Common frr ribosome releasing factor UU512 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 13357785 Pathogen - unique hypothetical membrane lipoprotein UU225.1 1 None None None 13357954 Common acpS holo-acyl carrier protein synthase UU393 8 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 13358066 Common epsG glycosyltransferase UU503 10 None None None 13357616 Common msbA-2 transport ATP-binding protein UU060 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 13357773 Common - hypothetical protein UU214 178 COG0820 COG0820, Predicted Fe-S-cluster redox enzyme General function prediction only 13357935 Common MBA multiple banded antigen UU375 106 COG5373 COG5373, Predicted membrane protein Function unknown 13358088 Common rpS7 30S ribosomal protein S7 UU524 247 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 13358115 Common rplI 50S ribosomal protein L9 UU551 205 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 13357789 Common rplT 50S ribosomal protein L20 UU229 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 13358154 Common trx thioredoxin UU589 231 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 13357620 Pathogen - hypothetical protein UU064 1 None None None 13357649 Pathogen - unique hypothetical membrane lipoprotein UU092 2 COG1277 NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component General function prediction only 13357888 Common - hypothetical protein UU328 14 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 13357988 Pathogen - hypothetical protein UU425 1 None None None 13357715 Pathogen - hypothetical protein UU158 1 None None None 13357906 Common - hypothetical protein UU346 144 COG1386 COG1386, Predicted transcriptional regulator containing the HTH domain Transcription 13357899 Common dnaK heat shock protein 70 (hsp70) UU339 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 13357872 Common - hypothetical protein UU312 26 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 13357686 Common atpD-2 F0F1 ATP synthase subunit beta UU129 247 COG0055 AtpD, F0F1-type ATP synthase, beta subunit Energy production and conversion 13357975 Common fpg formamidopyrimidine-DNA glycosylase UU413 182 COG0266 Nei, Formamidopyrimidine-DNA glycosylase DNA replication, recombination, and repair 13358141 Common rpsI 30S ribosomal protein S9 UU576 247 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 13358034 Pathogen - hypothetical protein UU471 1 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 13357629 Common - hypothetical protein UU073 37 COG1481 COG1481, Uncharacterized protein conserved in bacteria Function unknown 13357696 Pathogen - hypothetical protein UU139 1 None None None 13358102 Common ABC-4 ABC Transporter UU538 249 COG1122 CbiO, ABC-type cobalt transport system, ATPase component Inorganic ion transport and metabolism 13358085 Common pepF-2 oligoendopeptidase F - zinc metalloprotease UU521 85 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 13358150 Common deoC deoxyribose-phosphate aldolase UU585 138 COG0274 DeoC, Deoxyribose-phosphate aldolase Nucleotide transport and metabolism 13357847 Pathogen - hypothetical protein UU287 1 None None None 13358109 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A UU545 221 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 13358157 Common - conserved hypothetical ATP/GTP-binding protein UU592 100 COG1161 COG1161, Predicted GTPases General function prediction only 13357573 Common - hypothetical protein UU017 237 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 13357583 Pathogen ABCsbp-2 putative ABC substrate-binding protein - iron UU027 1 None None None 13358146 Common nusG transcription antitermination factor UU581 155 COG0250 NusG, Transcription antiterminator Transcription 13357808 Common rpsE 30S ribosomal protein S5 UU248 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 13357979 Common - hypothetical protein UU417 65 COG0618 COG0618, Exopolyphosphatase-related proteins General function prediction only 13357656 Common hsdS-3 type I restriction enzyme S protein (fragment) UU099 21 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 13357928 Common deoA thymidine phosphorylase UU368 120 COG0213 DeoA, Thymidine phosphorylase Nucleotide transport and metabolism 13358081 Pathogen ABCsbp-8 putative ABC substrate-binding protein - iron UU517 2 None None None 13357567 Common rplL 50S ribosomal protein L7/L12 UU011 212 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 13357647 Common - hypothetical protein UU090 36 COG1479 COG1479, Uncharacterized conserved protein Function unknown 13357886 Pathogen - hypothetical protein UU326 1 None None None 13357692 Common atpF F0F1 ATP synthase subunit B UU135 30 COG0711 AtpF, F0F1-type ATP synthase, subunit b Energy production and conversion 13358143 Pathogen - unique hypothetical membrane lipoprotein UU578 1 None None None 13358008 Pathogen - hypothetical protein UU445 2 None None None 13357834 Common hemN coproporphyrinogen III oxidase UU274 204 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 13357578 Common fatC-1 ferrichrome ABC transporter UU022 36 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357965 Common tnp-2 integrase-recombinase protein UU404 48 COG3328 COG3328, Transposase and inactivated derivatives DNA replication, recombination, and repair 13357651 Common - unique hypothetical membrane lipoprotein UU094 3 None None None 13357997 Common ureA urease complex component UU434 96 COG0831 UreA, Urea amidohydrolase (urease) gamma subunit Amino acid transport and metabolism 13358108 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B UU544 211 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 13357664 Common potA spermidine/putrescine transport ATP-binding protein UU107 249 COG3842 PotA, ABC-type spermidine/putrescine transport systems, ATPase components Amino acid transport and metabolism 13357940 Pathogen - hypothetical protein UU379.1 1 None None None 13357590 Common - hypothetical protein UU034 7 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 13357726 Pathogen - hypothetical protein UU168 1 None None None 161760542 Common - conserved hypothetical ATP/GTP-binding protein UU217 163 COG1162 COG1162, Predicted GTPases General function prediction only 13357860 Common nusB transcription termination factor UU300 14 COG0781 NusB, Transcription termination factor Transcription 13358014 Pathogen - hypothetical protein UU451 1 None None None 13357895 Common - hypothetical protein UU335 26 None None None 13357626 Common hmuU-1 hemin transport system permease UU070 189 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357913 Pathogen - unique hypothetical membrane lipoprotein UU353 1 None None None 13357813 Common infA translation initiation factor IF-1 UU253 214 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 13358040 Common mod adenine specific DNA methyltransferase UU477 86 COG2189 COG2189, Adenine specific DNA methylase Mod DNA replication, recombination, and repair 13358098 Common thrS threonyl-tRNA synthetase UU534 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357852 Common - hypothetical protein UU292 12 COG2755 TesA, Lysophospholipase L1 and related esterases Amino acid transport and metabolism 13357688 Pathogen - hypothetical protein UU131 1 None None None 13357599 Pathogen - conserved hypothetical membrane lipoprotein UU043 2 None None None 13357836 Common - nicotinate phosphoribosyltransferase UU276 57 COG1488 PncB, Nicotinic acid phosphoribosyltransferase Coenzyme metabolism 13358053 Common - hypothetical protein UU490 90 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 13357758 Common pstB phosphate transport ATP-binding protein B UU200 249 COG1117 PstB, ABC-type phosphate transport system, ATPase component Inorganic ion transport and metabolism 13358134 Common - hypothetical protein UU569 83 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 13358062 Common - hypothetical protein UU499 2 None None None 13357678 Common lig DNA ligase UU121 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 13357605 Pathogen - hypothetical protein UU049 2 None None None 13357840 Common celM Endo-1,4-beta-glucanase UU280 91 COG1363 FrvX, Cellulase M and related proteins Carbohydrate transport and metabolism 13357775 Common pkn serine/threonine kinase UU216 132 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 13358110 Pathogen - hypothetical protein UU546 1 None None None 13357956 Pathogen - hypothetical protein UU395 1 None None None 13357787 Common infC translation initiation factor IF-3 UU227 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 13357676 Common secA preprotein translocase subunit SecA UU119 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 13357779 Common - unique hypothetical membrane lipoprotein UU220 4 None None None 13358139 Common - hypothetical protein UU574 11 None None None 13358106 Common - hypothetical protein UU542 3 None None None 13358051 Common apt adenine phosphoribosyltransferase UU488 193 COG0503 Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins Nucleotide transport and metabolism 13358132 Common trmD tRNA (guanine-N1)-methyltransferase UU567 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 13357944 Common engA GTP-binding protein EngA UU383 219 COG1160 COG1160, Predicted GTPases General function prediction only 13358123 Common oppF oligopeptide transport system permease protein UU559 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 13357826 Common - GTPase EngB UU266 193 COG0218 COG0218, Predicted GTPase General function prediction only 13357751 Common prsA phosphoribosylpyrophosphate synthetase UU193 244 COG0462 PrsA, Phosphoribosylpyrophosphate synthetase Nucleotide transport and metabolism / Amino acid transport and metabolism 13357815 Common rpsM 30S ribosomal protein S13 UU255 248 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 13358119 Common - hypothetical protein UU555 9 COG1246 ArgA, N-acetylglutamate synthase and related acetyltransferases Amino acid transport and metabolism 13358045 Common - hypothetical protein UU482 27 None None None 13357744 Common pyk pyruvate kinase UU186 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 13357865 Common - hypothetical protein UU305 90 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 13357950 Common - conserved hypothetical ATP/GTP-binding protein UU389 71 COG1112 COG1112, Superfamily I DNA and RNA helicases and helicase subunits DNA replication, recombination, and repair 13357914 Common truB tRNA pseudouridine 55 synthase UU354 240 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 13358117 Common ssb single-strand binding protein UU553 211 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 13358064 Common uvrD DNA helicase II UU501 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 13358006 Common - unique hypothetical membrane lipoprotein UU443 18 None None None 13358083 Pathogen - hypothetical protein UU519 1 None None None 13358079 Common ABC-3 hypothetical ferrichrome ABC transporter UU515 2 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357627 Pathogen ABCsbp-4 putative ABC substrate-binding protein - iron UU071 1 None None None 13358048 Pathogen - unique hypothetical membrane lipoprotein UU485 2 None None None 13357922 Common gapN NADP-dependent glyceraldehyde-3-phosphate dehydrogenase UU362 220 COG1012 PutA, NAD-dependent aldehyde dehydrogenases Energy production and conversion 13357985 Common - hypothetical protein UU423 14 COG3557 COG3557, Uncharacterized domain/protein associated with RNAses G and E Translation, ribosomal structure and biogenesis 13358111 Pathogen - hypothetical protein UU547 2 COG1480 COG1480, Predicted membrane-associated HD superfamily hydrolase General function prediction only 13357733 Common trpS tryptophanyl-tRNA synthetase UU175 227 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357986 Common - hypothetical protein UU424 3 None None None 13357763 Common rnc ribonuclease III UU205 210 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 13357575 Common dnaH DNA polymerase III delta subunit UU019 51 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 13358023 Common nadE NH(3)-dependent NAD(+) synthetase UU460 185 COG0171 NadE, NAD synthase Coenzyme metabolism 13357713 Pathogen - hypothetical protein UU156 1 None None None 13357798 Common rplP 50S ribosomal protein L16 UU238 216 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 13357870 Common rpS20 ribosomal protein S20 UU310 88 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 13357908 Common lon ATP-dependent protease UU348 203 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 13357879 Pathogen - hypothetical protein UU319 1 COG2740 COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination Transcription 13357701 Pathogen - hypothetical protein UU144 1 None None None 13357816 Common rpS11 30S ribosomal protein S11 UU256 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 13357755 Common metS methionyl-tRNA synthetase UU197 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13358052 Pathogen - unique hypothetical membrane lipoprotein UU489 2 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 13358059 Common - hypothetical protein UU496 6 None None None 13357698 Common ftsY SRP family of GTP-binding proteins - cell division protein UU141 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 13358105 Common rplK 50S ribosomal protein L11 UU541 246 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 13357724 Pathogen - hypothetical protein UU166 1 None None None 13357855 Common - hypothetical protein UU295 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 13358135 Common - hypothetical protein UU570 159 COG0595 COG0595, Predicted hydrolase of the metallo-beta-lactamase superfamily General function prediction only 13357992 Common ureG urease complex component UU429 144 COG0378 HypB, Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase Posttranslational modification, protein turnover, chaperones / Transcription 13358001 Common ruvB-1 holliday junction DNA helicase (fragment) UU438 209 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 13357893 Common rpL32 ribosomal protein L32 UU333 30 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 13357608 Common - hypothetical protein UU052 3 None None None 13357749 Pathogen - hypothetical protein UU191 1 None None None 13357853 Common - hypothetical protein UU293 11 None None None 13357745 Common rpoB DNA-directed RNA polymerase subunit beta UU187 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 13357995 Common ureC urease subunit alpha UU432 96 COG0804 UreC, Urea amidohydrolase (urease) alpha subunit Amino acid transport and metabolism 13358092 Common dcm cytosine-specific methyltransferase UU528 58 COG0270 Dcm, Site-specific DNA methylase DNA replication, recombination, and repair 13357675 Common ABC-1 ABC Transporter UU118 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 13357917 Common fecD citrate-dependent iron transport, membrane-bound protein UU357 50 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357803 Common rplE 50S ribosomal protein L5 UU243 249 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 13357797 Common rpS3 ribosomal protein S3 UU237 246 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 13357801 Common rplN 50S ribosomal protein L14 UU241 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 13357976 Common polA DNA polymerase I: 5'-3' exonuclease domain UU414 216 COG0258 Exo, 5'-3' exonuclease (including N-terminal domain of PolI) DNA replication, recombination, and repair 13357633 Common - hypothetical protein UU077 95 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 13357952 Common clpB ATP-dependent serine proteinase - heat shock protein UU391 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 13357883 Common - hypothetical protein UU323 31 COG1451 COG1451, Predicted metal-dependent hydrolase General function prediction only 13357653 Common hsdS-1 type I restriction enzyme S protein (fragment) UU096 16 COG0732 HsdS, Restriction endonuclease S subunits Defense mechanisms 13358161 Common tsr fructose-bisphosphate aldolase UU596 176 COG0191 Fba, Fructose/tagatose bisphosphate aldolase Carbohydrate transport and metabolism 13357586 Common - hypothetical protein UU030 3 None None None 13357923 Common asnA asparagine synthetase AsnA UU363 31 COG2502 AsnA, Asparagine synthetase A Amino acid transport and metabolism 13357658 Pathogen - hypothetical protein UU101 1 None None None 13357645 Common recR recombination protein RecR UU089 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 13358026 Common fmt methionyl-tRNA formyltransferase UU463 218 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 13357682 Pathogen - hypothetical membrane lipoprotein UU125 1 None None None 13357712 Pathogen - hypothetical protein UU155 1 None None None 13357984 Pathogen - hypothetical protein UU422 1 None None None 13357607 Pathogen - hypothetical protein UU051 2 None None None 13357761 Common copA copper-transporting P-type ATPase UU203 231 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 13357902 Common cmk cytidylate kinase UU342 207 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 13358128 Pathogen - unique hypothetical membrane lipoprotein UU564 1 None None None 13357877 Common - hypothetical protein UU317 4 COG2177 FtsX, Cell division protein Cell division and chromosome partitioning 13358021 Common pheS phenylalanyl-tRNA synthetase subunit alpha UU458 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 13358057 Common dnaG DNA primase UU494 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 13358037 Common - hypothetical protein UU474 7 None None None 13358073 Common ABC-2 ABC Transporter UU510 17 COG2274 SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain Defense mechanisms 13357631 Common lgt prolipoprotein diacylglyceryl transferase UU075 114 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 13357623 Pathogen - hypothetical protein UU067 3 COG2188 PhnF, Transcriptional regulators Transcription 13357941 Common - hypothetical protein UU380 5 COG2249 MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) General function prediction only 13358113 Pathogen - unique hypothetical membrane lipoprotein UU549 1 None None None 13358039 Pathogen - unique hypothetical ATP/GTP-binding protein UU476 4 COG1061 SSL2, DNA or RNA helicases of superfamily II Transcription / DNA replication, recombination, and repair 13357844 Common pyrG CTP synthetase UU284 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 13357750 Common - hypothetical protein UU192 170 COG0073 ARC1, EMAP domain General function prediction only 13357768 Common rpmB 50S ribosomal protein L28 UU209.1 19 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 13358043 Common - conserved hypothetical ATP/GTP-binding protein UU480 5 COG1744 Med, Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein General function prediction only 13358147 Common deaD ATP-dependent RNA helicase UU582 235 COG0513 SrmB, Superfamily II DNA and RNA helicases DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis 13357901 Pathogen - hypothetical protein UU341 1 None None None 13357613 Common vacB virulence associated protein - Exoribonuclease UU057 190 COG0557 VacB, Exoribonuclease R Transcription 13357932 Common tnp-1 integrase-recombinase protein UU372 120 None None None 13358016 Common - hypothetical protein UU453 45 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 13357667 Common - conserved hypothetical membrane lipoprotein UU110 5 COG0687 PotD, Spermidine/putrescine-binding periplasmic protein Amino acid transport and metabolism 13357828 Common spoU-2 rRNA methylase UU268 153 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 13358050 Common - MBA N-terminal paralog UU487 3 None None None 13358140 Pathogen - hypothetical protein UU575 2 COG4866 COG4866, Uncharacterized conserved protein Function unknown 13357946 Common - hypothetical protein UU385 61 COG2001 COG2001, Uncharacterized protein conserved in bacteria Function unknown 13358129 Pathogen - hypothetical protein UU564.1 1 None None None 13357576 Common tmk thymidylate kinase UU020 226 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 13357799 Common rpL29 ribosomal protein L29 UU239 26 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 13357777 Common amt-1 ammonium transporter UU218 201 COG0004 AmtB, Ammonia permease Inorganic ion transport and metabolism 13357842 Common hupA DNA-binding protein Hu-alpha (HU-2) UU282 153 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 13358122 Pathogen - hypothetical protein UU558 3 None None None 13357757 Common pstA phosphate transport system permease UU199 224 COG0573 PstC, ABC-type phosphate transport system, permease component Inorganic ion transport and metabolism 13358080 Common fatC-3 ferric anguibactin transport system permerase protein UU516 74 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357673 Common upp uracil phosphoribosyltransferase UU116 164 COG0035 Upp, Uracil phosphoribosyltransferase Nucleotide transport and metabolism 13357830 Pathogen - hypothetical protein UU270 1 COG2194 COG2194, Predicted membrane-associated, metal-dependent hydrolase General function prediction only 13357691 Common atpH-2 ATP synthase delta chain N-term UU134 19 COG0712 AtpH, F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) Energy production and conversion 13358069 Common acpP acyl carrier protein UU506 7 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 13357770 Common - hypothetical protein UU211 6 COG2868 COG2868, Predicted ribosomal protein Translation, ribosomal structure and biogenesis 13357740 Common pgm phosphoglyceromutase UU182 125 COG0696 GpmI, Phosphoglyceromutase Carbohydrate transport and metabolism 13357939 Pathogen - hypothetical protein UU379 2 COG0510 CotS, Predicted choline kinase involved in LPS biosynthesis Cell envelope biogenesis, outer membrane 13357970 Pathogen - hypothetical protein UU408 4 None None None 13358018 Common - hypothetical protein UU455 5 None None None 13357601 Pathogen - conserved hypothetical membrane lipoprotein UU045 2 None None None 13357869 Pathogen - hypothetical protein UU309 1 None None None 13357594 Common - hypothetical protein UU038 64 COG2865 COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen Transcription 13357560 Common rpL31 ribosomal protein L31 UU002 18 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 13357722 Pathogen - hypothetical protein UU165 1 None None None 13358094 Common cpsG phosphomannomutase UU530 224 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 13357747 Pathogen - MBA N-terminal paralog UU189 1 None None None 13357703 Pathogen - hypothetical protein UU146 1 None None None 13357881 Common rbfA ribosome-binding factor A UU321 74 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 13357818 Common rplQ 50S ribosomal protein L17 UU258 215 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 13358065 Pathogen - unique hypothetical membrane lipoprotein UU502 2 None None None 13357990 Common - hypothetical protein UU427 7 COG1528 Ftn, Ferritin-like protein Inorganic ion transport and metabolism 13357974 Common metK S-adenosylmethionine synthetase UU412 213 COG0192 MetK, S-adenosylmethionine synthetase Coenzyme metabolism 13357617 Pathogen - hypothetical protein UU061 1 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357864 Common greA transcription elongation factor UU304 182 COG0782 GreA, Transcription elongation factor Transcription 13358151 Common tktA transketolase UU586 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 13357925 Common asnC asparaginyl-tRNA synthetase UU365 213 COG0017 AsnS, Aspartyl/asparaginyl-tRNA synthetases Translation, ribosomal structure and biogenesis 13358137 Pathogen - hypothetical protein UU572 2 None None None 13357684 Pathogen - hypothetical protein UU127 1 None None None 13357839 Common pgk phosphoglycerate kinase UU279 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 13358163 Common - hypothetical protein UU598 88 COG1078 COG1078, HD superfamily phosphohydrolases General function prediction only 13357857 Common - hypothetical protein UU297 12 COG3331 PrfA, Penicillin-binding protein-related factor A, putative recombinase General function prediction only 13357792 Common rplD 50S ribosomal protein L4 UU232 216 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 13357584 Pathogen ABCsbp-3 putative ABC substrate-binding protein - iron UU028 1 None None None 13357735 Common - hypothetical protein UU177 171 COG0061 COG0061, Predicted sugar kinase Carbohydrate transport and metabolism 13357655 Common hsdM-1 type I restriction enzyme M protein (fragment) UU098 160 COG0286 HsdM, Type I restriction-modification system methyltransferase subunit Defense mechanisms 13357643 Common dnaX DNA polymerase III subunits gamma and tau UU087 247 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 13357635 Common dnaN DNA pol III beta chain UU079 60 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 13357891 Pathogen - hypothetical protein UU331 1 None None None 13357846 Common aspS aspartyl-tRNA synthetase UU286 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 13357669 Pathogen - hypothetical protein UU112 2 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 13357730 Pathogen - MBA N-terminal paralog UU172 1 None None None 13357660 Pathogen - unique hypothetical membrane lipoprotein UU103 1 None None None 13358071 Common ftsK cell division protein UU508 28 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 13358104 Common rplA 50S ribosomal protein L1 UU540 248 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 13357918 Common fatC-2 ferrichrome ABC transporter UU358 91 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13358030 Common parC/gyrA topoisomerase IV subunit A UU467 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 13358032 Common nadD putative nicotinate-nucleotide adenylyltransferase UU469 146 COG1057 NadD, Nicotinic acid mononucleotide adenylyltransferase Coenzyme metabolism 13357737 Pathogen - hypothetical protein UU179 1 None None None 13357959 Pathogen - hypothetical protein UU398 1 None None None 13357618 Common lysS lysyl-tRNA synthetase UU062 248 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 13357981 Pathogen - hypothetical protein UU419 2 None None None 13358060 Pathogen - hypothetical protein UU497 2 None None None 13357821 Pathogen - hypothetical protein UU261 1 None None None 13357805 Common rpsH 30S ribosomal protein S8 UU245 236 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 13357982 Pathogen - hypothetical protein UU420 1 None None None 13357717 Pathogen - unique hypothetical membrane lipoprotein UU160 1 None None None 13357794 Common rplB 50S ribosomal protein L2 UU234 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 13357571 Common mglA methylgalactoside permease ATP-binding protein UU015 249 COG3845 COG3845, ABC-type uncharacterized transport systems, ATPase components General function prediction only 13357904 Common plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase UU344 41 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 13357875 Common ppa inorganic pyrophosphatase UU315 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 13358067 Pathogen - hypothetical protein UU504 2 None None None 13357921 Pathogen - unique hypothetical membrane lipoprotein UU361 1 None None None 18656942 Common rpmG Ribosomal protein L33 UU579a 32 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 13358166 Common ksgA dimethyladenosine transferase UU601 247 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 13357936 Pathogen - hypothetical protein UU376 1 None None None 13357783 Pathogen - unique hypothetical membrane lipoprotein UU224 1 None None None 13357710 Pathogen - hypothetical protein UU153 1 None None None 13358055 Common - hypothetical protein UU492 4 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 13357589 Common - hypothetical protein UU033 22 COG3600 GepA, Uncharacterized phage-associated protein Function unknown 13357671 Common folA dihyrofolate reductase UU114 133 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 13357611 Common mnuA-1 membrane nuclease A - hypothetical UU055 3 COG0737 UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases Nucleotide transport and metabolism 13357961 Common fatD-2 ferrichrome ABC transporter (permease) UU400 149 COG0609 FepD, ABC-type Fe3+-siderophore transport system, permease component Inorganic ion transport and metabolism 13357622 Common pta phosphotransacetylase UU066 93 COG0280 Pta, Phosphotransacetylase Energy production and conversion 13357968 Common grpE heat shock protein UU406 3 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 13358078 Common tsf elongation factor Ts UU514 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 13357766 Pathogen - hypothetical protein UU208 1 None None None 13358005 Pathogen - hypothetical protein UU442 1 None None None 13357772 Common gmk guanylate kinase UU213 213 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 13357948 Pathogen - hypothetical protein UU387 2 None None None 13358126 Common oppB oligopeptide transport system permease protein UU562 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism