Chlamydia trachomatis D/UW-3/CX, complete genome NC_000117 GI_Number Pathogen_associated Gene_name Product Synonym Number_of_Genera COG_Number COG_Description COG_Category 15604993 Common mraW S-adenosyl-methyltransferase MraW CT272 215 COG0275 COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis Cell envelope biogenesis, outer membrane 15604811 Common ychF translation-associated GTPase CT092 249 COG0012 COG0012, Predicted GTPase, probable translation factor Translation, ribosomal structure and biogenesis 15605378 Pathogen - hypothetical protein CT646 2 None None None 15605289 Pathogen - hypothetical protein CT560 2 None None None 15605169 Common omcB 60kDa Cysteine-Rich OMP CT443 15 None None None 15604756 Pathogen - hypothetical protein CT038 3 None None None 15604818 Common trxB Thioredoxin Reductase CT099 248 COG0492 TrxB, Thioredoxin reductase Posttranslational modification, protein turnover, chaperones 15605042 Pathogen secE preprotein translocase subunit SecE CT321 2 COG0690 SecE, Preprotein translocase subunit SecE Intracellular trafficking and secretion 15604722 Common gatB aspartyl/glutamyl-tRNA amidotransferase subunit B CT004 209 COG0064 GatB, Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) Translation, ribosomal structure and biogenesis 15604954 Pathogen incC Inclusion Membrane Protein C CT233 1 None None None 15604958 Common fabG 3-ketoacyl-(acyl-carrier-protein) reductase CT237 238 COG1028 FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only 15605295 Pathogen - hypothetical protein CT566 2 None None None 15605255 Common rplW 50S ribosomal protein L23 CT526 71 COG0089 RplW, Ribosomal protein L23 Translation, ribosomal structure and biogenesis 15605061 Pathogen - hypothetical protein CT338 2 None None None 15605039 Common rplA 50S ribosomal protein L1 CT318 236 COG0081 RplA, Ribosomal protein L1 Translation, ribosomal structure and biogenesis 15605578 Common rpsO 30S ribosomal protein S15 CT843 215 COG0184 RpsO, Ribosomal protein S15P/S13E Translation, ribosomal structure and biogenesis 15605174 Common recJ ssDNA Exonuclease CT447 192 COG0608 RecJ, Single-stranded DNA-specific exonuclease DNA replication, recombination, and repair 15605547 Pathogen - hypothetical protein CT813 1 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605282 Common fmu RNA Methyltransferase CT553 208 COG0144 Sun, tRNA and rRNA cytosine-C5-methylases Translation, ribosomal structure and biogenesis 15605606 Common pmpF Putative Outer Membrane Protein F CT870 5 None None None 15605343 Common folA Dihydrofolate Reductase CT612 134 COG0262 FolA, Dihydrofolate reductase Coenzyme metabolism 15605304 Common mutL DNA mismatch repair protein CT575 191 COG0323 MutL, DNA mismatch repair enzyme (predicted ATPase) DNA replication, recombination, and repair 15605359 Common ispA Geranylgeranyl pyrophosphate synthase CT628 236 COG0142 IspA, Geranylgeranyl pyrophosphate synthase Coenzyme metabolism 15604838 Pathogen incA Inclusion Membrane Protein A CT119 2 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15604861 Pathogen - hypothetical protein CT142 2 None None None 15604985 Common msbA Transport ATP Binding Protein CT264 249 COG1132 MdlB, ABC-type multidrug transport system, ATPase and permease components Defense mechanisms 15604888 Common trpR Trp operon repressor CT169 22 COG2973 TrpR, Trp operon repressor Transcription 15605450 Common fliI type III secretion system ATPase CT717 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 15605182 Common murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase CT455 211 COG0766 MurA, UDP-N-acetylglucosamine enolpyruvyl transferase Cell envelope biogenesis, outer membrane 15605415 Common pbpB PBP2-transglycolase/transpeptidase CT682 172 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 15605487 Common icc (phosphohydrolase) CT754 38 COG1409 Icc, Predicted phosphohydrolases General function prediction only 15605465 Common ribH riboflavin synthase subunit beta CT732 226 COG0054 RibH, Riboflavin synthase beta-chain Coenzyme metabolism 15604777 Pathogen - hypothetical protein CT058 2 None None None 15605334 Common groEL_2 HSP-60 CT604 217 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15604966 Common pdhA Pyruvate Dehydrogenase Alpha CT245 154 COG1071 AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Energy production and conversion 15604881 Pathogen - hypothetical protein CT162 1 None None None 15605229 Common ndk nucleoside diphosphate kinase CT500 230 COG0105 Ndk, Nucleoside diphosphate kinase Nucleotide transport and metabolism 15605236 Common rpoA DNA-directed RNA polymerase subunit alpha CT507 216 COG0202 RpoA, DNA-directed RNA polymerase, alpha subunit/40 kD subunit Transcription 15605116 Common - hypothetical protein CT391 8 COG2984 COG2984, ABC-type uncharacterized transport system, periplasmic component General function prediction only 15604973 Common lgt prolipoprotein diacylglyceryl transferase CT252 188 COG0682 Lgt, Prolipoprotein diacylglyceryltransferase Cell envelope biogenesis, outer membrane 15604847 Common adk adenylate kinase CT128 229 COG0563 Adk, Adenylate kinase and related kinases Nucleotide transport and metabolism 15605059 Common ptsI PTS PEP Phosphotransferase CT336 195 COG1080 PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Carbohydrate transport and metabolism 15605473 Common dmpP Na(+)-translocating NADH-quinone reductase subunit F CT740 128 COG2871 NqrF, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF Energy production and conversion 15605536 Common rpsR 30S ribosomal protein S18 CT802 215 COG0238 RpsR, Ribosomal protein S18 Translation, ribosomal structure and biogenesis 15605513 Common - Thioredoxin Disulfide Isomerase CT780 7 COG2143 COG2143, Thioredoxin-related protein Posttranslational modification, protein turnover, chaperones 15605246 Common rplX 50S ribosomal protein L24 CT517 169 COG0198 RplX, Ribosomal protein L24 Translation, ribosomal structure and biogenesis 15605052 Common xseA exodeoxyribonuclease VII large subunit CT329 205 COG1570 XseA, Exonuclease VII, large subunit DNA replication, recombination, and repair 15605592 Common ychM Sulfate Transporter CT856 162 COG0659 SUL1, Sulfate permease and related transporters (MFS superfamily) Inorganic ion transport and metabolism 15605105 Common artJ Arginine Binding Protein CT381 165 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15605045 Pathogen - hypothetical protein CT324 2 None None None 15605609 Pathogen - hypothetical protein CT873 1 None None None 15604802 Pathogen - hypothetical protein CT083 2 None None None 15605414 Pathogen ompA Major Outer Membrane Protein CT681 2 None None None 15604923 Common - hypothetical protein CT203 6 None None None 15605464 Common ribA/ribB bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein CT731 232 COG0108 RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Coenzyme metabolism 15604748 Common gmk guanylate kinase CT030 214 COG0194 Gmk, Guanylate kinase Nucleotide transport and metabolism 15605360 Common glmU UDP-GlcNAc Pyrophosphorylase CT629 205 COG1207 GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Cell envelope biogenesis, outer membrane 15605573 Pathogen - hypothetical protein CT838 3 COG0795 COG0795, Predicted permeases General function prediction only 15605585 Pathogen - hypothetical protein CT849.1 3 None None None 161723221 Common trmB tRNA (guanine-N(7))-methyltransferase CT829 158 COG0220 COG0220, Predicted S-adenosylmethionine-dependent methyltransferase General function prediction only 15604897 Common dsbG possible Disulfide Bond Chaperone CT177 10 COG1651 DsbG, Protein-disulfide isomerase Posttranslational modification, protein turnover, chaperones 15604799 Pathogen ltuB hypothetical protein CT080 2 None None None 15605565 Common ytgB_2 rRNA methylase (possible) CT830 28 COG4123 COG4123, Predicted O-methyltransferase General function prediction only 15605147 Pathogen - hypothetical protein CT421.1 2 None None None 15605408 Common karG ATP:guanido phosphotransferase CT675 22 COG3869 COG3869, Arginine kinase Amino acid transport and metabolism 15605057 Common dnaX_2 DNA polymerase III subunits gamma and tau CT334 246 COG2812 DnaX, DNA polymerase III, gamma/tau subunits DNA replication, recombination, and repair 15604735 Common - hypothetical protein CT017 6 None None None 15604890 Common trpA Tryptophan Synthase (Alpha Chain) CT171 210 COG0159 TrpA, Tryptophan synthase alpha chain Amino acid transport and metabolism 15605540 Common ptr Insulinase family/Protease III CT806 185 COG1025 Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like Posttranslational modification, protein turnover, chaperones 15604767 Common yraL SAM-dependent methyltransferase CT048 207 COG0313 COG0313, Predicted methyltransferases General function prediction only 15605436 Common engA GTP-binding protein EngA CT703 223 COG1160 COG1160, Predicted GTPases General function prediction only 15605581 Pathogen - hypothetical protein CT846 2 None None None 15605445 Pathogen - hypothetical protein CT712 2 None None None 15605363 Common - hypothetical protein CT632 14 COG1351 THY1, Predicted alternative thymidylate synthase Nucleotide transport and metabolism 15604792 Common - predicted OMP [leader (19) peptide] CT073 26 COG1075 LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold General function prediction only 15605444 Pathogen - hypothetical protein CT711 2 None None None 15604782 Common gnd 6-phosphogluconate dehydrogenase CT063 175 COG0362 Gnd, 6-phosphogluconate dehydrogenase Carbohydrate transport and metabolism 15604776 Common gcpE 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CT057 188 COG0821 GcpE, Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis Lipid metabolism 15604727 Common yfgA HTH Transcriptional Regulator CT009 42 COG1426 COG1426, Uncharacterized protein conserved in bacteria Function unknown 15605376 Common yohI predicted oxidoreductase CT644 205 COG0042 COG0042, tRNA-dihydrouridine synthase Translation, ribosomal structure and biogenesis 15605017 Pathogen - hypothetical protein CT296 2 None None None 15605457 Pathogen - hypothetical protein CT724 2 None None None 15605424 Common - hypothetical protein CT691 33 COG1392 COG1392, Phosphate transport regulator (distant homolog of PhoU) Inorganic ion transport and metabolism 15605427 Pathogen - hypothetical protein CT694 1 None None None 15605204 Common ada Methylated-DNA protein - cysteine methyltransferase CT477 9 COG0350 Ada, Methylated DNA-protein cysteine methyltransferase DNA replication, recombination, and repair 15604783 Common lepA GTP-binding protein LepA CT064 249 COG0481 LepA, Membrane GTPase LepA Cell envelope biogenesis, outer membrane 15605151 Common rsbV_1 Sigma Regulatory Factor CT424 53 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 15605135 Common pcnB_1 PolyA Polymerase CT410 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 15605495 Common murC/ddlA UDP-N-acetylmuramate-alanine ligase and D-Ala-D-Ala Ligase CT762 222 COG0773 MurC, UDP-N-acetylmuramate-alanine ligase Cell envelope biogenesis, outer membrane 15605341 Common - hypothetical protein CT610 35 COG5424 COG5424, Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C Coenzyme metabolism 15605083 Common - hypothetical protein CT359 97 COG1268 BioY, Uncharacterized conserved protein General function prediction only 15605509 Common aas long chain fatty acid--[acyl-carrier-protein] ligase CT776 209 COG0318 CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15605256 Common rplD 50S ribosomal protein L4 CT527 217 COG0088 RplD, Ribosomal protein L4 Translation, ribosomal structure and biogenesis 15605023 Common valS valyl-tRNA synthetase CT302 249 COG0525 ValS, Valyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605290 Common yscL type III secretion system protein CT561 49 COG1317 FliH, Flagellar biosynthesis/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 15605263 Common lnt apolipoprotein N-acyltransferase CT534 145 COG0815 Lnt, Apolipoprotein N-acyltransferase Cell envelope biogenesis, outer membrane 15604737 Common ileS isoleucyl-tRNA synthetase CT019 249 COG0060 IleS, Isoleucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605075 Pathogen - hypothetical protein CT352 1 None None None 15604743 Common ffh Signal Recognition Particle GTPase CT025 247 COG0541 Ffh, Signal recognition particle GTPase Intracellular trafficking and secretion 15604991 Common pbp3 transglycolase/transpeptidase CT270 207 COG0768 FtsI, Cell division protein FtsI/penicillin-binding protein 2 Cell envelope biogenesis, outer membrane 15604854 Pathogen - hypothetical protein CT135 1 COG4709 COG4709, Predicted membrane protein Function unknown 15604827 Common ybgI ACR family CT108 98 COG0327 COG0327, Uncharacterized conserved protein Function unknown 15605611 Common rpsL 30S ribosomal protein S12 CT439m 243 COG0048 RpsL, Ribosomal protein S12 Translation, ribosomal structure and biogenesis 15605325 Common dsbD Thio:disulfide Interchange Protein CT595 128 COG4232 COG4232, Thiol:disulfide interchange protein Posttranslational modification, protein turnover, chaperones / Energy production and conversion 15605481 Common mfd Transcription-Repair Coupling CT748 219 COG1197 Mfd, Transcription-repair coupling factor (superfamily II helicase) DNA replication, recombination, and repair / Transcription 15605369 Pathogen - hypothetical protein CT638 3 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 15605503 Common fabF 3-oxoacyl-(acyl carrier protein) synthase II CT770 210 COG0304 FabB, 3-oxoacyl-(acyl-carrier-protein) synthase Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15605555 Common ftsY Cell Division Protein FtsY CT820 247 COG0552 FtsY, Signal recognition particle GTPase Intracellular trafficking and secretion 15604948 Pathogen - hypothetical protein CT227 1 None None None 15605176 Pathogen - hypothetical protein CT449 1 None None None 15605141 Common - ABC Transporter ATPase CT416 243 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 15605095 Pathogen - hypothetical protein CT371 2 None None None 15605375 Common topA DNA topoisomerase I/SWI domain fusion protein CT643 247 COG0550 TopA, Topoisomerase IA DNA replication, recombination, and repair 15605280 Common dacC D-Ala-D-Ala Carboxypeptidase CT551 150 COG1686 DacC, D-alanyl-D-alanine carboxypeptidase Cell envelope biogenesis, outer membrane 15605222 Common sohB Protease CT494 170 COG0616 SppA, Periplasmic serine proteases (ClpP class) Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15604872 Pathogen - hypothetical protein CT153 2 None None None 15605349 Pathogen - hypothetical protein CT618 2 None None None 15605524 Common uvrC excinuclease ABC subunit C CT791 223 COG0322 UvrC, Nuclease subunit of the excinuclease complex DNA replication, recombination, and repair 15604971 Common dnaA chromosomal replication initiation protein CT250 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15605357 Common rpsD 30S ribosomal protein S4 CT626 223 COG0522 RpsD, Ribosomal protein S4 and related proteins Translation, ribosomal structure and biogenesis 15605206 Common oppB_2 Oligopeptide Permease CT479 215 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15605511 Common priA primosome assembly protein PriA CT778 212 COG1198 PriA, Primosomal protein N' (replication factor Y) - superfamily II helicase DNA replication, recombination, and repair 15605302 Pathogen - hypothetical protein CT573 3 None None None 15605125 Common sucB_2 branched-chain alpha-keto acid dehydrogenase subunit E2 CT400 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15605111 Common - predicted metal dependent hydrolase CT386 16 COG4286 COG4286, Uncharacterized conserved protein related to MYG1 family Function unknown 15604754 Pathogen - hypothetical protein CT036 2 None None None 15605210 Pathogen - hypothetical protein CT482 2 None None None 15605398 Pathogen - hypothetical protein CT665 3 None None None 15604956 Common - cAMP-Dependent Protein Kinase Regulatory Subunit CT235 33 COG0664 Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases Signal transduction mechanisms 15605040 Common rplK 50S ribosomal protein L11 CT319 242 COG0080 RplK, Ribosomal protein L11 Translation, ribosomal structure and biogenesis 15605608 Common pmpH Putative Outer Membrane Protein H CT872 3 None None None 15605180 Common plsC Glycerol-3-P Acyltransferase CT453 107 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15604879 Pathogen - hypothetical protein CT160 1 None None None 15605164 Common fusA elongation factor G CT437 249 COG0480 FusA, Translation elongation factors (GTPases) Translation, ribosomal structure and biogenesis 15605323 Pathogen - hypothetical protein CT593.1 3 None None None 15605384 Common recD_2 Exodeoxyribonuclease V, Alpha CT652 125 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 15604856 Common ywlC SuA5 Superfamily-related Protein CT137 237 COG0009 SUA5, Putative translation factor (SUA5) Translation, ribosomal structure and biogenesis 15605030 Pathogen - hypothetical protein CT309 3 None None None 15604770 Pathogen - hypothetical protein CT051 2 None None None 15605033 Pathogen - predicted ferredoxin CT312 2 None None None 15605296 Pathogen - hypothetical protein CT567 2 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 15605391 Common sfhB (Pseudouridine Synthase) CT658 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 15604883 Pathogen - hypothetical protein CT164 1 None None None 15605534 Common pth peptidyl-tRNA hydrolase CT800 216 COG0193 Pth, Peptidyl-tRNA hydrolase Translation, ribosomal structure and biogenesis 15605238 Common rpsM 30S ribosomal protein S13 CT509 241 COG0099 RpsM, Ribosomal protein S13 Translation, ribosomal structure and biogenesis 15604741 Common prfA peptide chain release factor 1 CT023 216 COG0216 PrfA, Protein chain release factor A Translation, ribosomal structure and biogenesis 15605276 Pathogen - hypothetical protein CT547 3 COG4105 ComL, DNA uptake lipoprotein General function prediction only 15604733 Common phoH ATPase CT015 199 COG1875 COG1875, Predicted ATPase related to phosphate starvation-inducible protein PhoH Signal transduction mechanisms 15605056 Common uvrA excinuclease ABC subunit A CT333 242 COG0178 UvrA, Excinuclease ATPase subunit DNA replication, recombination, and repair 15605050 Common trpC N-(5'-phosphoribosyl)anthranilate isomerase CT327 184 COG0135 TrpF, Phosphoribosylanthranilate isomerase Amino acid transport and metabolism 15605082 Pathogen - hypothetical protein CT358 1 None None None 15605560 Common - hypothetical protein CT825 142 COG1322 COG1322, Uncharacterized protein conserved in bacteria Function unknown 15604932 Common - hypothetical protein CT212 62 COG1259 COG1259, Uncharacterized conserved protein Function unknown 15605244 Common rpsH 30S ribosomal protein S8 CT515 218 COG0096 RpsH, Ribosomal protein S8 Translation, ribosomal structure and biogenesis 161723223 Common zwf glucose-6-phosphate 1-dehydrogenase CT185 159 COG0364 Zwf, Glucose-6-phosphate 1-dehydrogenase Carbohydrate transport and metabolism 15605542 Common cafE Axial Filament Protein CT808 185 COG1530 CafA, Ribonucleases G and E Translation, ribosomal structure and biogenesis 15604789 Common ytgD Integral Membrane Protein CT070 115 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15604903 Common pyrG CTP synthetase CT183 246 COG0504 PyrG, CTP synthase (UTP-ammonia lyase) Nucleotide transport and metabolism 15604951 Common - Neutral Amino Acid (Glutamate) Transporter CT230 83 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 15605354 Pathogen - CHLPN 76kDa Homolog CT623 3 None None None 15605476 Pathogen hctA Histone-Like Developmental Protein CT743 3 None None None 15605453 Common - NifU-related protein CT720 15 COG0822 IscU, NifU homolog involved in Fe-S cluster formation Energy production and conversion 15605467 Pathogen - hypothetical protein CT734 3 None None None 15605587 Common map methionine aminopeptidase CT851 248 COG0024 Map, Methionine aminopeptidase Translation, ribosomal structure and biogenesis 15604779 Common flhA type III secretion system protein CT060 127 COG1298 FlhA, Flagellar biosynthesis pathway, component FlhA Cell motility and secretion / Intracellular trafficking and secretion 15605312 Pathogen gp6D CHLTR Plasmid Paralog CT583 3 None None None 15605251 Common rpsC 30S ribosomal protein S3 CT522 249 COG0092 RpsC, Ribosomal protein S3 Translation, ribosomal structure and biogenesis 15605392 Common - hypothetical protein CT659 35 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 15605571 Common pheS phenylalanyl-tRNA synthetase subunit alpha CT836 249 COG0016 PheS, Phenylalanyl-tRNA synthetase alpha subunit Translation, ribosomal structure and biogenesis 15605419 Common - ABC Transporter Membrane Protein CT686 153 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 15605595 Common ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CT859 188 COG0761 LytB, Penicillin tolerance protein Lipid metabolism / Cell envelope biogenesis, outer membrane 15605583 Pathogen - hypothetical protein CT848 2 None None None 15604845 Common rpsI 30S ribosomal protein S9 CT126 247 COG0103 RpsI, Ribosomal protein S9 Translation, ribosomal structure and biogenesis 15604915 Pathogen - hypothetical protein CT195 2 None None None 15605406 Common pkn5 S/T Protein Kinase CT673 134 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 15605153 Common - hypothetical protein CT426 81 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 15605430 Common nth Endonuclease III CT697 237 COG0177 Nth, Predicted EndoIII-related endonuclease DNA replication, recombination, and repair 15604833 Pathogen - hypothetical protein CT114 3 COG2912 COG2912, Uncharacterized conserved protein Function unknown 15605440 Common tig trigger factor CT707 125 COG0544 Tig, FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Posttranslational modification, protein turnover, chaperones 15604780 Common fliA RNA polymerase sigma factor sigma-28 CT061 216 COG1191 FliA, DNA-directed RNA polymerase specialized sigma subunit Transcription 15604912 Pathogen - hypothetical protein CT192 1 None None None 15604769 Pathogen - hypothetical protein CT050 2 None None None 15604925 Common pfkA_1 diphosphate--fructose-6-phosphate 1-phosphotransferase CT205 112 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 15605005 Common - Phospholipase D superfamily [uncleavable leader peptide] CT284 38 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15605028 Common atpB V-type ATP synthase subunit B CT307 247 COG1156 NtpB, Archaeal/vacuolar-type H+-ATPase subunit B Energy production and conversion 15605137 Common pmpA Putative outer membrane protein A CT412 8 None None None 15605549 Pathogen - hypothetical protein CT814.1 2 None None None 15604793 Common recF recombination protein F CT074 167 COG1195 RecF, Recombinational DNA repair ATPase (RecF pathway) DNA replication, recombination, and repair 15605412 Common tsf elongation factor Ts CT679 216 COG0264 Tsf, Translation elongation factor Ts Translation, ribosomal structure and biogenesis 15604800 Pathogen - CHLTR T2 Protein CT081 1 None None None 15605107 Pathogen - hypothetical protein CT382.1 2 None None None 15605213 Common hemH ferrochelatase CT485 173 COG0276 HemH, Protoheme ferro-lyase (ferrochelatase) Coenzyme metabolism 15605067 Common lon Lon ATP-dependent protease CT344 208 COG0466 Lon, ATP-dependent Lon protease, bacterial type Posttranslational modification, protein turnover, chaperones 15604809 Common lcrD Low Calcium Response D CT090 127 COG4789 EscV, Type III secretory pathway, component EscV Intracellular trafficking and secretion 15605431 Common trmE tRNA modification GTPase TrmE CT698 224 COG0486 ThdF, Predicted GTPase General function prediction only 15605557 Common sucD succinyl-CoA synthetase subunit alpha CT822 206 COG0074 SucD, Succinyl-CoA synthetase, alpha subunit Energy production and conversion 15605261 Common fabZ (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase CT532 187 COG0764 FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases Lipid metabolism 15604825 Common yceC predicted pseudouridine synthetase family CT106 215 COG0564 RluA, Pseudouridylate synthases, 23S RNA-specific Translation, ribosomal structure and biogenesis 15604895 Common oppA_2 Oligopeptide binding protein permease CT175 145 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15605567 Common nusB transcription antitermination protein NusB CT832 3 COG0781 NusB, Transcription termination factor Transcription 15605588 Common yhgN YhgN family CT852 58 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 15605447 Common gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CT714 212 COG0240 GpsA, Glycerol-3-phosphate dehydrogenase Energy production and conversion 15605197 Pathogen recO DNA repair protein RecO CT470 3 COG1381 RecO, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 15605173 Pathogen euo CHLPS Euo Protein CT446 3 None None None 15605367 Common greA transcript cleavage factor/unknown domain fusion protein CT636 187 COG1747 COG1747, Uncharacterized N-terminal domain of the transcription elongation factor GreA Function unknown 15605166 Pathogen - hypothetical protein CT440 2 None None None 15604758 Pathogen - hypothetical protein CT039.1 1 None None None 15604946 Pathogen - hypothetical protein CT225 1 None None None 15605008 Common trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CT287 213 COG0482 TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain Translation, ribosomal structure and biogenesis 15605602 Common glgB glycogen branching enzyme CT866 150 COG0296 GlgB, 1,4-alpha-glucan branching enzyme Carbohydrate transport and metabolism 15604980 Common - PP2C phosphatase family CT259 137 COG0631 PTC1, Serine/threonine protein phosphatase Signal transduction mechanisms 15605422 Common dppF ABC Transport ATPase CT689 249 COG1123 COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase General function prediction only 15604987 Pathogen - hypothetical protein CT266 3 None None None 15605382 Common recA recombinase A CT650 215 COG0468 RecA, RecA/RadA recombinase DNA replication, recombination, and repair 15605071 Common yjjK ABC Transporter Protein ATPase CT348 249 COG0488 Uup, ATPase components of ABC transporters with duplicated ATPase domains General function prediction only 15605455 Common pgm phosphoglyceromutase CT722 161 COG0588 GpmA, Phosphoglycerate mutase 1 Carbohydrate transport and metabolism 15605459 Common rodA Rod Shape Protein CT726 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 15605025 Common atpK V-type ATP synthase subunit K CT304 17 None None None 15605425 Common - Phosphate Permease CT692 171 COG0306 PitA, Phosphate/sulphate permeases Inorganic ion transport and metabolism 15605507 Common cysQ Sulfite Synthesis/biphosphate phosphatase CT774 68 COG1218 CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Inorganic ion transport and metabolism 15605021 Pathogen - hypothetical protein CT300 1 None None None 15605275 Pathogen - predicted OMP [leader (17) peptide] CT546 3 None None None 15605497 Pathogen - hypothetical protein CT764 3 None None None 15605085 Common dapA dihydrodipicolinate synthase CT361 233 COG0329 DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane 15605268 Common trxA Thioredoxin CT539 233 COG3118 COG3118, Thioredoxin domain-containing protein Posttranslational modification, protein turnover, chaperones 15605016 Common mrsA_1 Phosphomannomutase CT295 234 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 15604720 Common gatC aspartyl/glutamyl-tRNA amidotransferase subunit C CT002 12 COG0721 GatC, Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit Translation, ribosomal structure and biogenesis 15604938 Common surE stationary phase survival protein SurE CT218 185 COG0496 SurE, Predicted acid phosphatase General function prediction only 15605054 Common dxs 1-deoxy-D-xylulose-5-phosphate synthase CT331 215 COG1154 Dxs, Deoxyxylulose-5-phosphate synthase Coenzyme metabolism / Lipid metabolism 15605121 Common dnaK molecular chaperone DnaK CT396 235 COG0443 DnaK, Molecular chaperone Posttranslational modification, protein turnover, chaperones 15604920 Common oppC_1 Oligopeptide Permease CT200 220 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15604934 Pathogen - hypothetical protein CT214 2 None None None 15605454 Common yfhO_2 NifS-related protein CT721 173 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 15604864 Common - Serine/threonine Protein Kinase CT145 133 COG1262 COG1262, Uncharacterized conserved protein Function unknown 15605461 Common - hypothetical protein CT728 4 COG1814 COG1814, Uncharacterized membrane protein Function unknown 15604953 Pathogen incB Inclusion Membrane Protein B CT232 2 None None None 15605148 Pathogen - hypothetical protein CT421.2 3 None None None 15605351 Pathogen - hypothetical protein CT620 2 None None None 15605520 Common rpsN 30S ribosomal protein S14 CT787 212 COG0199 RpsN, Ribosomal protein S14 Translation, ribosomal structure and biogenesis 15604989 Common amiA N-Acetylmuramoyl Alanine Amidase CT268 182 COG0860 AmiC, N-acetylmuramoyl-L-alanine amidase Cell envelope biogenesis, outer membrane 15605160 Pathogen hemD uroporphyrinogen-III synthase CT433 2 COG1587 HemD, Uroporphyrinogen-III synthase Coenzyme metabolism 15604908 Common tdk thymidylate kinase CT188 227 COG0125 Tmk, Thymidylate kinase Nucleotide transport and metabolism 15605477 Pathogen - CHLTR possible phosphoprotein CT744 2 None None None 15604884 Pathogen - hypothetical protein CT165 2 None None None 15605118 Common proS prolyl-tRNA synthetase CT393 231 COG0442 ProS, Prolyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605330 Common pal Peptidoglycan-Associated Lipoprotein CT600 149 COG2885 OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins Cell envelope biogenesis, outer membrane 15605224 Common pgsA_1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CT496 62 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15604870 Common - hypothetical protein CT151 139 COG4591 LolE, ABC-type transport system, involved in lipoprotein release, permease component Cell envelope biogenesis, outer membrane 15605232 Pathogen - hypothetical protein CT503 2 None None None 15605516 Common - predicted disulfide bond isomerase CT783 4 None None None 15605518 Pathogen rpmH 50S ribosomal protein L34 CT785 2 None None None 15605013 Common dut deoxyuridine 5'-triphosphate nucleotidohydrolase CT292 180 COG0756 Dut, dUTPase Nucleotide transport and metabolism 15605243 Common rplF 50S ribosomal protein L6 CT514 232 COG0097 RplF, Ribosomal protein L6P/L9E Translation, ribosomal structure and biogenesis 15605328 Pathogen - hypothetical protein CT598 2 None None None 15605352 Pathogen - hypothetical protein CT621 2 None None None 15605460 Common zntA Metal Transport P-type ATPase CT727 232 COG2217 ZntA, Cation transport ATPase Inorganic ion transport and metabolism 15604976 Common - hypothetical protein CT255 80 COG1694 MazG, Predicted pyrophosphatase General function prediction only 15605259 Common fmt methionyl-tRNA formyltransferase CT530 215 COG0223 Fmt, Methionyl-tRNA formyltransferase Translation, ribosomal structure and biogenesis 15605186 Common prfB peptide chain release factor 2 CT459 216 COG1186 PrfB, Protein chain release factor B Translation, ribosomal structure and biogenesis 15605157 Common dapF diaminopimelate epimerase CT430 197 COG0253 DapF, Diaminopimelate epimerase Amino acid transport and metabolism 15605373 Common ygeD predicted Efflux Protein CT641 119 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15604752 Common ytfF Cationic Amino Acid Transporter CT034 25 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15605370 Pathogen - hypothetical protein CT638.1 2 COG1792 MreC, Cell shape-determining protein Cell envelope biogenesis, outer membrane 15605409 Common - hypothetical protein CT676 7 COG3880 COG3880, Uncharacterized protein with conserved CXXC pairs Function unknown 15605201 Pathogen - hypothetical protein CT474 2 None None None 15605298 Pathogen - predicted OMP [leader (16) peptide] CT569 3 COG2165 PulG, Type II secretory pathway, pseudopilin PulG Cell motility and secretion / Intracellular trafficking and secretion 15605314 Common trpS tryptophanyl-tRNA synthetase CT585 249 COG0180 TrpS, Tryptophanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15604740 Common rpmE2 50S ribosomal protein L31 type B CT022 122 COG0254 RpmE, Ribosomal protein L31 Translation, ribosomal structure and biogenesis 15605239 Common secY preprotein translocase subunit SecY CT510 248 COG0201 SecY, Preprotein translocase subunit SecY Intracellular trafficking and secretion 15605132 Common dksA DnaK Suppressor CT407 144 COG1734 DksA, DnaK suppressor protein Signal transduction mechanisms 15605346 Common rpoD RNA polymerase sigma factor RpoD CT615 216 COG0568 RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Transcription 15605143 Common obgE GTPase ObgE CT418 249 COG0536 Obg, Predicted GTPase General function prediction only 15604877 Common - Phospholipase D endonuclease superfamily CT158 25 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15605178 Common cdsA Phosphatidate Cytidylytransferase CT451 181 COG0575 CdsA, CDP-diglyceride synthetase Lipid metabolism 15605274 Common dnaE DNA polymerase III subunit alpha CT545 216 COG0587 DnaE, DNA polymerase III, alpha subunit DNA replication, recombination, and repair 15605286 Common lpdA dihydrolipoamide dehydrogenase CT557 248 COG1249 Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Energy production and conversion 15604997 Common - hypothetical protein CT276 50 COG1664 CcmA, Integral membrane protein CcmA involved in cell shape determination Cell envelope biogenesis, outer membrane 15605526 Pathogen - hypothetical protein CT793 1 None None None 15605308 Pathogen - hypothetical protein CT579 2 None None None 15604814 Common rbfA ribosome-binding factor A CT095 121 COG0858 RbfA, Ribosome-binding factor A Translation, ribosomal structure and biogenesis 15605601 Pathogen - hypothetical protein CT865 3 None None None 15604731 Common cydA Cytochrome Oxidase Subunit I CT013 162 COG1271 CydA, Cytochrome bd-type quinol oxidase, subunit 1 Energy production and conversion 15605208 Pathogen - hypothetical protein CT480.1 1 None None None 15605130 Common ribC riboflavin synthase subunit alpha CT405 209 COG0307 RibC, Riboflavin synthase alpha chain Coenzyme metabolism 15605003 Common gcsH glycine cleavage system protein H CT282 184 COG0509 GcvH, Glycine cleavage system H protein (lipoate-binding) Amino acid transport and metabolism 15605080 Pathogen - hypothetical protein (possible 357R?) CT357R 1 None None None 15605139 Common pmpC Putative outer membrane protein C CT414 9 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 15605381 Common ygfA Formyltetrahydrofolate synthetase CT649 47 COG0212 COG0212, 5-formyltetrahydrofolate cyclo-ligase Coenzyme metabolism 15605267 Pathogen - hypothetical protein CT538 3 None None None 15605491 Common murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase CT758 208 COG0771 MurD, UDP-N-acetylmuramoylalanine-D-glutamate ligase Cell envelope biogenesis, outer membrane 15605087 Common asd aspartate-semialdehyde dehydrogenase CT363 209 COG0136 Asd, Aspartate-semialdehyde dehydrogenase Amino acid transport and metabolism 15604795 Common smpB SsrA-binding protein CT076 216 COG0691 SmpB, tmRNA-binding protein Posttranslational modification, protein turnover, chaperones 15605191 Common - Phosphoglycolate Phosphatase CT464 55 COG0637 COG0637, Predicted phosphatase/phosphohexomutase General function prediction only 15605449 Common - hypothetical protein CT716 3 None None None 15605569 Common rpmI 50S ribosomal protein L35 CT834 92 COG0291 RpmI, Ribosomal protein L35 Translation, ribosomal structure and biogenesis 15605272 Common hisS histidyl-tRNA synthetase CT543 247 COG0124 HisS, Histidyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605165 Common rs7 30S ribosomal protein S7 CT438 243 COG0049 RpsG, Ribosomal protein S7 Translation, ribosomal structure and biogenesis 15605404 Pathogen - hypothetical protein CT671 2 None None None 15605332 Pathogen - hypothetical protein CT602 3 None None None 15605064 Common dnaJ Heat Shock Protein J CT341 233 COG0484 DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain Posttranslational modification, protein turnover, chaperones 15605218 Pathogen - hypothetical protein CT490 2 None None None 15605420 Common yfhO_1 NifS-related enzyme CT687 240 COG0520 CsdB, Selenocysteine lyase Amino acid transport and metabolism 15604726 Common rnhB_1 ribonuclease HIII CT008 28 COG1039 RnhC, Ribonuclease HIII DNA replication, recombination, and repair 15605504 Common - hydrolase/phosphatase homolog CT771 24 COG0494 MutT, NTP pyrophosphohydrolases including oxidative damage repair enzymes DNA replication, recombination, and repair / General function prediction only 15604942 Pathogen - hypothetical protein CT221.1 1 None None None 15605610 Common pmpI Putative Outer Membrane Protein I CT874 5 None None None 15605108 Pathogen - hypothetical protein CT383 2 None None None 15604858 Common oppA_1 Oligopeptide Binding Protein CT139 112 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15604761 Common glgX Glycogen Hydrolase (debranching) CT042 161 COG1523 PulA, Type II secretory pathway, pullulanase PulA and related glycosidases Carbohydrate transport and metabolism 15604837 Pathogen - hypothetical protein CT118 1 None None None 15605171 Pathogen - hypothetical protein CT444.1 2 None None None 15605485 Common efp_2 elongation factor P CT752 216 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 15605388 Common kdsA 2-dehydro-3-deoxyphosphooctonate aldolase CT655 186 COG2877 KdsA, 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Cell envelope biogenesis, outer membrane 15604823 Common fabI enoyl-(acyl carrier protein) reductase CT104 183 COG0623 FabI, Enoyl- acyl-carrier-protein 15604828 Pathogen - CHLPS hypothetical protein CT109 2 None None None 15605551 Common glmS D-fructose-6-phosphate amidotransferase CT816 238 COG0449 GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains Cell envelope biogenesis, outer membrane 15605390 Pathogen - hypothetical protein CT657 2 None None None 15605500 Common - hypothetical protein CT767 84 COG1060 ThiH, Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Coenzyme metabolism / General function prediction only 15604944 Pathogen - hypothetical protein CT223 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15605155 Common ubiE ubiquinone/menaquinone biosynthesis methyltransferase CT428 206 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15604927 Common pfkA_2 diphosphate--fructose-6-phosphate 1-phosphotransferase CT207 125 COG0205 PfkA, 6-phosphofructokinase Carbohydrate transport and metabolism 15605596 Pathogen - hypothetical protein CT860 2 None None None 15605126 Common gltT Glutamate Symport CT401 160 COG1301 GltP, Na+/H+-dicarboxylate symporters Energy production and conversion 15605576 Common ftsH ATP-dependent zinc protease CT841 249 COG0465 HflB, ATP-dependent Zn proteases Posttranslational modification, protein turnover, chaperones 15604843 Common accC acetyl-CoA carboxylase biotin carboxylase subunit CT124 223 COG0439 AccC, Biotin carboxylase Lipid metabolism 15605532 Common glgA glycogen synthase CT798 136 COG0297 GlgA, Glycogen synthase Carbohydrate transport and metabolism 15605248 Common rpsQ 30S ribosomal protein S17 CT519 239 COG0186 RpsQ, Ribosomal protein S17 Translation, ribosomal structure and biogenesis 15605012 Common ptsN_2 PTS IIA Protein CT291 133 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 15605211 Pathogen - hypothetical protein CT483 2 None None None 15605397 Common - (FHA domain; homology to adenylate cyclase) CT664 13 COG1716 COG1716, FOG: FHA domain Signal transduction mechanisms 15604807 Pathogen sycE Secretion Chaperone CT088 3 None None None 15604910 Common gyrB DNA gyrase subunit B CT190 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 15605049 Pathogen - hypothetical protein CT326.2 1 None None None 15605253 Common rpsS 30S ribosomal protein S19 CT524 245 COG0185 RpsS, Ribosomal protein S19 Translation, ribosomal structure and biogenesis 15604919 Common oppB_1 Oligopeptide Permease CT199 219 COG0601 DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15604813 Common truB tRNA pseudouridine synthase B CT094 245 COG0130 TruB, Pseudouridine synthase Translation, ribosomal structure and biogenesis 15605339 Common uvrD DNA Helicase CT608 232 COG0210 UvrD, Superfamily I DNA and RNA helicases DNA replication, recombination, and repair 15604963 Common - (OmpH-Like Outer Membrane Protein) CT242 10 COG2825 HlpA, Outer membrane protein Cell envelope biogenesis, outer membrane 15605078 Pathogen - hypothetical protein CT355 3 None None None 15605198 Pathogen - hypothetical protein CT471 2 None None None 15605441 Common - SWF/SNF family helicase CT708 153 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 15605094 Common aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein CT370 159 COG0169 AroE, Shikimate 5-dehydrogenase Amino acid transport and metabolism 15605101 Pathogen ltuA hypothetical protein CT377 2 None None None 15604831 Common pepF Oligoendopeptidase CT112 87 COG1164 COG1164, Oligoendopeptidase F Amino acid transport and metabolism 15605123 Common - hypothetical protein CT398 36 COG1579 COG1579, Zn-ribbon protein, possibly nucleic acid-binding General function prediction only 15604745 Common trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein CT027 215 COG0336 TrmD, tRNA-(guanine-N1)-methyltransferase Translation, ribosomal structure and biogenesis 15605037 Common rplL 50S ribosomal protein L7/L12 CT316 214 COG0222 RplL, Ribosomal protein L7/L12 Translation, ribosomal structure and biogenesis 15604978 Common - hypothetical protein CT257 189 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15605514 Common lysS lysyl-tRNA synthetase CT781 239 COG1190 LysU, Lysyl-tRNA synthetase (class II) Translation, ribosomal structure and biogenesis 15604886 Pathogen - hypothetical protein CT167 2 None None None 15605103 Common hflX GTP Binding Protein CT379 218 COG2262 HflX, GTPases General function prediction only 15605234 Common gapA glyceraldehyde-3-phosphate dehydrogenase CT505 217 COG0057 GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase Carbohydrate transport and metabolism 15604768 Pathogen - hypothetical protein CT049 2 None None None 15605311 Common minD chromosome partitioning ATPase-CHLTR plasmid protein homolog GP5D CT582 229 COG1192 Soj, ATPases involved in chromosome partitioning Cell division and chromosome partitioning 15604759 Common ruvB Holliday junction DNA helicase B CT040 218 COG2255 RuvB, Holliday junction resolvasome, helicase subunit DNA replication, recombination, and repair 15605241 Common rpsE 30S ribosomal protein S5 CT512 249 COG0098 RpsE, Ribosomal protein S5 Translation, ribosomal structure and biogenesis 15605278 Common rsbW sigma regulatory factor-histidine kinase CT549 32 COG2172 RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) Signal transduction mechanisms 15605418 Common - ABC Transporter ATPase CT685 249 COG0396 SufC, ABC-type transport system involved in Fe-S cluster assembly, ATPase component Posttranslational modification, protein turnover, chaperones 15605434 Common secA preprotein translocase subunit SecA CT701 215 COG0653 SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) Intracellular trafficking and secretion 15604901 Pathogen - hypothetical protein CT181 3 None None None 15605603 Pathogen - Membrane Thiol Protease (predicted) CT867 2 None None None 15604816 Common nusA transcription elongation factor NusA CT097 216 COG0195 NusA, Transcription elongation factor Transcription 15605559 Common - Zinc Metalloprotease (insulinase family) CT824 44 COG1026 COG1026, Predicted Zn-dependent peptidases, insulinase-like General function prediction only 15605128 Common yjfH rRNA Methylase (SpoU family) CT403 174 COG0566 SpoU, rRNA methylases Translation, ribosomal structure and biogenesis 15605484 Common amn AMP nucleosidase CT751 84 COG0775 Pfs, Nucleoside phosphorylase Nucleotide transport and metabolism 15605470 Common - SET Domain protein CT737 14 COG2940 COG2940, Proteins containing SET domain General function prediction only 15604868 Common - possible hydrolase CT149 18 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 15604936 Common xasA Amino Acid Transporter CT216 117 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15605098 Common arcD Arginine/Ornithine Antiporter CT374 109 COG0531 PotE, Amino acid transporters Amino acid transport and metabolism 15605031 Common atpE V-type ATP synthase subunit E CT310 11 COG1390 NtpE, Archaeal/vacuolar-type H+-ATPase subunit E Energy production and conversion 15605530 Common glyQ Glycyl tRNA Synthetase CT796 167 COG0751 GlyS, Glycyl-tRNA synthetase, beta subunit Translation, ribosomal structure and biogenesis 15605463 Common ribD Riboflavin Deaminase CT730 232 COG1985 RibD, Pyrimidine reductase, riboflavin biosynthesis Coenzyme metabolism 15605337 Pathogen - hypothetical protein CT606.1 2 None None None 15605316 Common eno phosphopyruvate hydratase CT587 246 COG0148 Eno, Enolase Carbohydrate transport and metabolism 15605284 Common - SWI/SNF family helicase CT555 135 COG0553 HepA, Superfamily II DNA/RNA helicases, SNF2 family Transcription / DNA replication, recombination, and repair 15605345 Common folX Dihydroneopterin Aldolase CT614 14 COG1539 FolB, Dihydroneopterin aldolase Coenzyme metabolism 15605471 Common yycJ metal dependent hydrolase CT738 57 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 15604995 Common - hypothetical protein CT274 4 None None None 15604906 Common devB 6-phosphogluconolactonase CT186 108 COG0363 NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase Carbohydrate transport and metabolism 15604961 Common recR recombination protein RecR CT240 204 COG0353 RecR, Recombinational DNA repair protein (RecF pathway) DNA replication, recombination, and repair 15605301 Common gspD Gen. Secretion Protein D CT572 136 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 15605306 Pathogen - hypothetical protein CT577 2 None None None 15604718 Pathogen - hypothetical protein CT875 1 None None None 15604863 Pathogen - hypothetical protein CT144 2 None None None 15605320 Common sdhB succinate dehydrogenase iron-sulfur subunit CT591 208 COG0479 FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Energy production and conversion 15604750 Common metG methionyl-tRNA synthetase CT032 249 COG0143 MetG, Methionyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605394 Common gyrB_2 DNA topoisomerase IV subunit B CT661 230 COG0187 GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit DNA replication, recombination, and repair 15605522 Pathogen - hypothetical protein CT789 1 None None None 15605326 Common exbB polysaccharide transporter CT596 145 COG0811 TolQ, Biopolymer transport proteins Intracellular trafficking and secretion 15604853 Pathogen - hypothetical protein CT134 1 None None None 15605043 Common tuf elongation factor Tu CT322 249 COG0050 TufB, GTPases - translation elongation factors Translation, ribosomal structure and biogenesis 15605257 Common rplC 50S ribosomal protein L3 CT528 222 COG0087 RplC, Ribosomal protein L3 Translation, ribosomal structure and biogenesis 15605489 Common murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminoligase CT756 208 COG0770 MurF, UDP-N-acetylmuramyl pentapeptide synthase Cell envelope biogenesis, outer membrane 15604974 Pathogen - hypothetical protein CT253 2 None None None 15604893 Pathogen - hypothetical protein CT173 1 None None None 15604968 Common pdhC branched-chain alpha-keto acid dehydrogenase subunit E2 CT247 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15605562 Common nrdA ribonucleotide-diphosphate reductase subunit alpha CT827 226 COG0209 NrdA, Ribonucleotide reductase, alpha subunit Nucleotide transport and metabolism 15604875 Pathogen - hypothetical protein CT156 1 None None None 15605066 Common - O-Sialoglycoprotein Endopeptidase family CT343 7 COG1214 COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone Posttranslational modification, protein turnover, chaperones 15605265 Common dnaQ_2 DNA polymerase III subunit epsilon CT536 193 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 15604949 Pathogen - hypothetical protein CT228 1 None None None 15605115 Common aspC L,L-diaminopimelate aminotransferase CT390 238 COG0436 COG0436, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15605292 Common yscS Yop proteins translocation protein S CT563 74 COG4794 EscS, Type III secretory pathway, component EscS Intracellular trafficking and secretion 15604835 Pathogen - hypothetical protein CT116 1 None None None 15605002 Common nqr5 Na(+)-translocating NADH-quinone reductase subunit E CT281 76 COG2209 NqrE, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE Energy production and conversion 15604763 Common ssb single-strand DNA-binding protein CT044 8 COG0629 Ssb, Single-stranded DNA-binding protein DNA replication, recombination, and repair 15605553 Common tyrP_2 Tyrosine Transport CT818 32 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 15604821 Pathogen - hypothetical protein CT102 2 COG3190 FliO, Flagellar biogenesis protein Cell motility and secretion 15605091 Common aroL shikimate kinase CT367 40 COG0703 AroK, Shikimate kinase Amino acid transport and metabolism 15604785 Pathogen - hypothetical protein CT066 3 None None None 15604982 Common dnaQ_1 DNA polymerase III subunit epsilon CT261 183 COG0847 DnaQ, DNA polymerase III, epsilon subunit and related 3'-5' exonucleases DNA replication, recombination, and repair 15605158 Common clpP_1 ATP-dependent Clp protease proteolytic subunit CT431 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15604898 Common - hypothetical protein CT178 10 None None None 15605574 Pathogen - hypothetical protein CT839 3 COG0795 COG0795, Predicted permeases General function prediction only 15605451 Pathogen - hypothetical protein CT718 2 None None None 15605194 Common atoS 2-component regulatory system-sensor histidine kinase CT467 219 COG3852 NtrB, Signal transduction histidine kinase, nitrogen specific Signal transduction mechanisms 15605226 Common dnaB replicative DNA helicase CT497 216 COG0305 DnaB, Replicative DNA helicase DNA replication, recombination, and repair 15605089 Pathogen - hypothetical protein CT365 2 None None None 15604724 Pathogen - hypothetical protein CT006 2 None None None 15605216 Common - hypothetical protein CT488 15 COG1768 COG1768, Predicted phosphohydrolase General function prediction only 15605193 Pathogen - hypothetical protein CT466 2 None None None 15605402 Common yscN type III secretion system ATPase CT669 247 COG1157 FliI, Flagellar biosynthesis/type III secretory pathway ATPase Cell motility and secretion / Intracellular trafficking and secretion 15605493 Common ftsW Cell Division Protein FtsW CT760 207 COG0772 FtsW, Bacterial cell division membrane protein Cell division and chromosome partitioning 15604916 Pathogen - hypothetical protein CT196 1 None None None 15605437 Common pcnB_2 Poly A Polymerase CT704 213 COG0617 PcnB, tRNA nucleotidyltransferase/poly(A) polymerase Translation, ribosomal structure and biogenesis 15605480 Common hemE uroporphyrinogen decarboxylase CT747 174 COG0407 HemE, Uroporphyrinogen-III decarboxylase Coenzyme metabolism 15605599 Pathogen - hypothetical protein CT863 2 None None None 15605443 Common pckA phosphoenolpyruvate carboxykinase CT710 59 COG1274 PckA, Phosphoenolpyruvate carboxykinase (GTP) Energy production and conversion 15605528 Pathogen - hypothetical protein CT794.1 1 None None None 15605386 Common yhbG ABC Transporter ATPase CT653 249 COG1137 YhbG, ABC-type (unclassified) transport system, ATPase component General function prediction only 15605019 Common radA DNA repair protein RadA CT298 208 COG1066 Sms, Predicted ATP-dependent serine protease Posttranslational modification, protein turnover, chaperones 15605365 Common - Na(+)-translocating NADH-quinone reductase subunit A CT634 39 COG1726 NqrA, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA Energy production and conversion 15605544 Common rpmF 50S ribosomal protein L32 CT810 65 COG0333 RpmF, Ribosomal protein L32 Translation, ribosomal structure and biogenesis 15604998 Pathogen - hypothetical protein CT277 2 None None None 15604940 Common ubiX aromatic acid decarboxylase CT220 154 COG0163 UbiX, 3-polyprenyl-4-hydroxybenzoate decarboxylase Coenzyme metabolism 15604841 Common efp_1 elongation factor P CT122 205 COG0231 Efp, Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Translation, ribosomal structure and biogenesis 15604929 Common leuS leucyl-tRNA synthetase CT209 249 COG0495 LeuS, Leucyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605590 Common - ABC transporter permease fused to pyrimidine biosynthesis enzyme CT854 169 COG0600 TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Inorganic ion transport and metabolism 15604774 Common sucB_1 dihydrolipoamide acetyltransferase CT055 195 COG0508 AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes Energy production and conversion 15605247 Common rplN 50S ribosomal protein L14 CT518 248 COG0093 RplN, Ribosomal protein L14 Translation, ribosomal structure and biogenesis 15605416 Common - TPR-motif protein CT683 140 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15605271 Common aspS aspartyl-tRNA synthetase CT542 249 COG0173 AspS, Aspartyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605189 Common ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CT462 181 COG1211 IspD, 4-diphosphocytidyl-2-methyl-D-erithritol synthase Lipid metabolism 15604805 Common rpmB 50S ribosomal protein L28 CT086 96 COG0227 RpmB, Ribosomal protein L28 Translation, ribosomal structure and biogenesis 15605010 Pathogen - hypothetical protein CT289 2 COG3064 TolA, Membrane protein involved in colicin uptake Cell envelope biogenesis, outer membrane 15604803 Common - Phopholipase D Superfamily CT084 35 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15605432 Common psdD phosphatidylserine decarboxylase CT699 97 COG0688 Psd, Phosphatidylserine decarboxylase Lipid metabolism 15605426 Common pgk phosphoglycerate kinase CT693 247 COG0126 Pgk, 3-phosphoglycerate kinase Carbohydrate transport and metabolism 15604846 Common ydhO predicted polysaccharide hydrolase-invasin repeat family CT127 77 COG0791 Spr, Cell wall-associated hydrolases (invasion-associated proteins) Cell envelope biogenesis, outer membrane 15604922 Common oppF Oligopeptide Transport ATPase CT202 249 COG1124 DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15605065 Common rpsU 30S ribosomal protein S21 CT342 5 COG0828 RpsU, Ribosomal protein S21 Translation, ribosomal structure and biogenesis 15605318 Pathogen - hypothetical protein CT589 2 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 15605104 Common phnP predicted metal dependent hydrolase (histidinic triad) CT380 83 COG1235 PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I General function prediction only 15605548 Pathogen - hypothetical protein CT814 2 None None None 15605593 Common - [IM protein] CT857 33 COG1055 ArsB, Na+/H+ antiporter NhaD and related arsenite permeases Inorganic ion transport and metabolism 15605235 Common rplQ 50S ribosomal protein L17 CT506 216 COG0203 RplQ, Ribosomal protein L17 Translation, ribosomal structure and biogenesis 15604781 Common tyrS tyrosyl-tRNA synthetase CT062 216 COG0162 TyrS, Tyrosyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605146 Common - hypothetical protein CT421 72 COG2928 COG2928, Uncharacterized conserved protein Function unknown 15605435 Pathogen - hypothetical protein CT702 2 None None None 15604914 Common mgtE Mg++ Transporter (CBS Domain) CT194 166 COG2239 MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) Inorganic ion transport and metabolism 15605362 Pathogen - hypothetical protein CT631 3 None None None 15605407 Common yscC probable Yop proteins translocation protein C/general secretion pathway protein CT674 123 COG1450 PulD, Type II secretory pathway, component PulD Cell motility and secretion / Intracellular trafficking and secretion 15604891 Pathogen - hypothetical protein CT172 1 None None None 15605580 Common - hypothetical protein CT845 4 None None None 15605393 Common gyrA_2 DNA topoisomerase IV subunit A CT660 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 15605541 Pathogen plsB Glycerol-3-P Acyltransferase CT807 4 None None None 15604791 Common yaeL Metalloprotease CT072 209 COG0750 COG0750, Predicted membrane-associated Zn-dependent proteases 1 Cell envelope biogenesis, outer membrane 15605499 Common miaA tRNA delta(2)-isopentenylpyrophosphate transferase CT766 213 COG0324 MiaA, tRNA delta(2)-isopentenylpyrophosphate transferase Translation, ribosomal structure and biogenesis 161723222 Common - hypothetical protein CT388 38 COG1872 COG1872, Uncharacterized conserved protein Function unknown 15604778 Common fer Ferredoxin CT059 11 COG0633 Fdx, Ferredoxin Energy production and conversion 15605572 Pathogen - hypothetical protein CT837 2 None None None 15605539 Common - hypothetical protein CT805 16 None None None 15605074 Pathogen - hypothetical protein CT351 3 None None None 15605584 Pathogen - hypothetical protein CT849 2 None None None 15605307 Pathogen - hypothetical protein CT578 2 None None None 15604757 Common dcd deoxycytidine triphosphate deaminase CT039 148 COG0717 Dcd, Deoxycytidine deaminase Nucleotide transport and metabolism 15605594 Common - predicted Protease containing IRBP and DHR domains CT858 7 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 15605084 Pathogen - hypothetical protein CT360 1 None None None 15605196 Common - hypothetical protein CT469 7 None None None 15605496 Common - hypothetical protein CT763 49 COG1837 COG1837, Predicted RNA-binding protein (contains KH domain) General function prediction only 15605020 Common hemC porphobilinogen deaminase CT299 222 COG0181 HemC, Porphobilinogen deaminase Coenzyme metabolism 15605508 Common - snGlycerol 3-P Acyltransferase CT775 21 COG0204 PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase Lipid metabolism 15605214 Common fliY Glutamine Binding Protein CT486 25 COG0834 HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Amino acid transport and metabolism / Signal transduction mechanisms 15605024 Pathogen - hypothetical protein CT303 2 None None None 15605269 Common yibK rRNA Methylase (SpoU family) CT540 167 COG0219 CspR, Predicted rRNA methylase (SpoU class) Translation, ribosomal structure and biogenesis 15605385 Pathogen - hypothetical protein CT652.1 3 None None None 15605062 Common - hypothetical protein CT339 10 COG0658 ComEC, Predicted membrane metal-binding protein General function prediction only 15604986 Common accA acetyl-CoA carboxylase carboxyltransferase subunit alpha CT265 203 COG0825 AccA, Acetyl-CoA carboxylase alpha subunit Lipid metabolism 15605122 Common vacB Ribonuclease Family CT397 192 COG0557 VacB, Exoribonuclease R Transcription 15605262 Common lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase CT533 139 COG0774 LpxC, UDP-3-O-acyl-N-acetylglucosamine deacetylase Cell envelope biogenesis, outer membrane 15605150 Common - (CBS Domain) CT423 217 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15604957 Common acpP acyl carrier protein CT236 209 COG0236 AcpP, Acyl carrier protein Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism 15605458 Common birA biotin--protein ligase CT725 127 COG0340 BirA, Biotin-(acetyl-CoA carboxylase) ligase Coenzyme metabolism 15605228 Common lplA_2 Lipoate Protein Ligase CT499 43 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 15605566 Common murB UDP-N-acetylenolpyruvoylglucosamine reductase CT831 195 COG0812 MurB, UDP-N-acetylmuramate dehydrogenase Cell envelope biogenesis, outer membrane 15605554 Common yccA Transport Permease CT819 83 COG0670 COG0670, Integral membrane protein, interacts with FtsH General function prediction only 15605134 Common - Amino acid permease CT409 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 15605009 Pathogen - hypothetical protein CT288 2 None None None 15604721 Common gatA aspartyl/glutamyl-tRNA amidotransferase subunit A CT003 222 COG0154 GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Translation, ribosomal structure and biogenesis 15604832 Common clpB Clp Protease ATPase CT113 215 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 15604798 Pathogen - hypothetical protein CT079 3 None None None 15604855 Common - predicted Lysophospholipase esterase CT136 31 COG0400 COG0400, Predicted esterase General function prediction only 15605291 Common yscR type III secretion system protein CT562 128 COG1338 FliP, Flagellar biosynthesis pathway, component FliP Cell motility and secretion / Intracellular trafficking and secretion 15604826 Common mutY A/G-specific Adenine Glycosylase CT107 235 COG1194 MutY, A/G-specific DNA glycosylase DNA replication, recombination, and repair 15605172 Common gltX glutamyl-tRNA synthetase CT445 249 COG0008 GlnS, Glutamyl- and glutaminyl-tRNA synthetases Translation, ribosomal structure and biogenesis 15605482 Common alaS alanyl-tRNA synthetase CT749 249 COG0013 AlaS, Alanyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15604746 Common rplS 50S ribosomal protein L19 CT028 216 COG0335 RplS, Ribosomal protein L19 Translation, ribosomal structure and biogenesis 15604947 Pathogen - hypothetical protein CT226 1 None None None 15605368 Common tyrB aromatic amino acid aminotransferase CT637 72 COG1448 TyrB, Aspartate/tyrosine/aromatic aminotransferase Amino acid transport and metabolism 15604755 Pathogen - hypothetical protein CT037 1 None None None 15605525 Common mutS DNA mismatch repair protein CT792 205 COG0249 MutS, Mismatch repair ATPase (MutS family) DNA replication, recombination, and repair 15605060 Common ptsH PTS Phosphocarrier Protein Hpr CT337 107 COG1925 FruB, Phosphotransferase system, HPr-related proteins Carbohydrate transport and metabolism 15605324 Common ycfH PHP superfamily hydrolase CT594 238 COG0084 TatD, Mg-dependent DNase DNA replication, recombination, and repair 15605348 Common rpsT 30S ribosomal protein S20 CT617 106 COG0268 RpsT, Ribosomal protein S20 Translation, ribosomal structure and biogenesis 15605379 Pathogen - hypothetical protein CT647 2 None None None 15605097 Common - hypothetical protein CT373 4 COG1945 COG1945, Uncharacterized conserved protein Function unknown 15605600 Common xerD site-specific tyrosine recombinase XerD CT864 228 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15604959 Common fabD acyl-carrier-protein S-malonyltransferase CT238 209 COG0331 FabD, (acyl-carrier-protein) S-malonyltransferase Lipid metabolism 15604869 Common rpmG 50S ribosomal protein L33 CT150 58 COG0267 RpmG, Ribosomal protein L33 Translation, ribosomal structure and biogenesis 15605041 Common nusG transcription antitermination protein NusG CT320 215 COG0250 NusG, Transcription antiterminator Transcription 15604960 Common fabH 3-oxoacyl-(acyl carrier protein) synthase III CT239 213 COG0332 FabH, 3-oxoacyl- acyl-carrier-protein 15605203 Common - hypothetical protein CT476 5 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 15605358 Common yceA hypothetical protein CT627 112 COG1054 COG1054, Predicted sulfurtransferase General function prediction only 15604873 Common - Phospholipase D Endonuclease Superfamily CT154 38 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15605305 Common lcrH_1 Low Calcium Response Protein H CT576 14 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15605070 Common xerC site-specific tyrosine recombinase XerC CT347 228 COG4974 XerD, Site-specific recombinase XerD DNA replication, recombination, and repair 15604860 Common secA_1 Protein Translocase CT141 31 COG3318 COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA General function prediction only 15605294 Pathogen - hypothetical protein CT565 2 None None None 15604967 Common pdhB Pyruvate Dehydrogenase Beta CT246 207 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 15604907 Common dnaX_1 DNA polymerase III subunit delta' CT187 208 COG0470 HolB, ATPase involved in DNA replication DNA replication, recombination, and repair 15605175 Common secD/secF bifunctional preprotein translocase subunit SecD/SecF CT448 211 COG0342 SecD, Preprotein translocase subunit SecD Intracellular trafficking and secretion 15605546 Common pmpD Putative Outer Membrane Protein D CT812 3 COG4625 COG4625, Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain Function unknown 15604819 Common acpS 4'-phosphopantetheinyl transferase CT100 55 COG0736 AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) Lipid metabolism 15604984 Pathogen - hypothetical protein CT263 2 None None None 15605556 Common sucC succinyl-CoA synthetase subunit beta CT821 206 COG0045 SucC, Succinyl-CoA synthetase, beta subunit Energy production and conversion 15605605 Common pmpE Putative Outer Membrane Protein E CT869 4 None None None 15604955 Common - C. psittaci hypothetical protein CT234 10 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 15604992 Pathogen - hypothetical protein CT271 3 None None None 15605472 Common ftsK Cell Division Protein FtsK CT739 199 COG1674 FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins Cell division and chromosome partitioning 15604760 Common - hypothetical protein CT041 4 None None None 15604736 Pathogen - hypothetical protein CT018 2 None None None 15604931 Common - hypothetical protein CT211 130 COG1678 COG1678, Putative transcriptional regulator Transcription 15604808 Common lcrE Low Calcium Response E CT089 6 None None None 15605277 Pathogen - hypothetical protein CT548 2 None None None 15605245 Common rplE 50S ribosomal protein L5 CT516 239 COG0094 RplE, Ribosomal protein L5 Translation, ribosomal structure and biogenesis 15605283 Common brnQ Amino Acid (Branched) Transport CT554 50 COG1114 BrnQ, Branched-chain amino acid permeases Amino acid transport and metabolism 15604747 Common rnhB ribonuclease HII CT029 227 COG0164 RnhB, Ribonuclease HII DNA replication, recombination, and repair 15604904 Common yqgF Holliday junction resolvase-like protein CT184 121 COG0816 COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) DNA replication, recombination, and repair 15605537 Common rplI 50S ribosomal protein L9 CT803 212 COG0359 RplI, Ribosomal protein L9 Translation, ribosomal structure and biogenesis 15604887 Pathogen - hypothetical protein CT168 2 None None None 15605034 Common tal transaldolase B CT313 187 COG0176 MipB, Transaldolase Carbohydrate transport and metabolism 15605058 Common - hypothetical protein CT335 36 COG0718 COG0718, Uncharacterized protein conserved in bacteria Function unknown 15605117 Pathogen yprS hypothetical protein CT392 2 None None None 15605051 Common tpiA triosephosphate isomerase CT328 216 COG0149 TpiA, Triosephosphate isomerase Carbohydrate transport and metabolism 15605374 Pathogen - hypothetical protein CT642 3 None None None 15605168 Pathogen crpA 15kDa Cysteine-Rich Protein CT442 2 None None None 15605221 Common polA DNA polymerase I CT493 216 COG0749 PolA, DNA polymerase I - 3'-5' exonuclease and polymerase domains DNA replication, recombination, and repair 15604765 Pathogen hctB Histone-like Protein 2 CT046 2 None None None 15605184 Common yebC hypothetical protein CT457 212 COG0217 COG0217, Uncharacterized conserved protein Function unknown 15605144 Common rpmA 50S ribosomal protein L27 CT419 215 COG0211 RpmA, Ribosomal protein L27 Translation, ribosomal structure and biogenesis 15604880 Pathogen - hypothetical protein CT161 1 None None None 15605183 Common - hypothetical protein CT456 3 COG5422 ROM1, RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Signal transduction mechanisms 15604902 Common kdsB 3-deoxy-manno-octulosonate cytidylyltransferase CT182 146 COG1212 KdsB, CMP-2-keto-3-deoxyoctulosonic acid synthetase Cell envelope biogenesis, outer membrane 15604738 Common lepB Signal Peptidase I CT020 105 COG0681 LepB, Signal peptidase I Intracellular trafficking and secretion 15604762 Pathogen - hypothetical protein CT043 4 None None None 15605582 Pathogen - hypothetical protein CT847 2 None None None 15604965 Pathogen - hypothetical protein CT244 2 None None None 15605076 Common def peptide deformylase CT353 214 COG0242 Def, N-formylmethionyl-tRNA deformylase Translation, ribosomal structure and biogenesis 15605475 Common ygcA rRNA Methyltransferse CT742 197 COG2265 TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase Translation, ribosomal structure and biogenesis 15604913 Common tgt queuine tRNA-ribosyltransferase CT193 230 COG0343 Tgt, Queuine/archaeosine tRNA-ribosyltransferase Translation, ribosomal structure and biogenesis 15605162 Common cysJ Sulfite Reductase CT435 86 COG0369 CysJ, Sulfite reductase, alpha subunit (flavoprotein) Inorganic ion transport and metabolism 15605250 Common rplP 50S ribosomal protein L16 CT521 217 COG0197 RplP, Ribosomal protein L16/L10E Translation, ribosomal structure and biogenesis 15605586 Common - hypothetical protein CT850 6 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15604918 Common oppA_3 Oligopeptide Binding Protein CT198 173 COG4166 OppA, ABC-type oligopeptide transport system, periplasmic component Amino acid transport and metabolism 15605287 Common lipA lipoyl synthase CT558 190 COG0320 LipA, Lipoate synthase Coenzyme metabolism 15605046 Common - hypothetical protein CT325 29 COG2166 COG2166, SufE protein probably involved in Fe-S center assembly General function prediction only 15605543 Pathogen - hypothetical protein CT809 3 None None None 15605570 Common rplT 50S ribosomal protein L20 CT835 216 COG0292 RplT, Ribosomal protein L20 Translation, ribosomal structure and biogenesis 15605313 Pathogen - hypothetical protein CT584 2 None None None 15604943 Pathogen - CHLTR hypothetical protein CT222 1 None None None 15604836 Pathogen - hypothetical protein CT117 1 None None None 15604882 Pathogen - hypothetical protein CT163 1 None None None 15604866 Common - hypothetical protein CT147 4 COG0419 SbcC, ATPase involved in DNA repair DNA replication, recombination, and repair 15604801 Pathogen - hypothetical protein CT082 2 None None None 15605068 Pathogen - hypothetical protein CT345 1 None None None 15605131 Common - hypothetical protein CT406 176 COG1327 COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Transcription 15605297 Pathogen - hypothetical protein CT568 2 None None None 15604771 Common hemN_1 coproporphyrinogen III oxidase CT052 206 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 15605106 Common aroG 3-deoxy-7-phosphoheptulonate synthase CT382 179 COG2876 AroA, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase Amino acid transport and metabolism 15604742 Common - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase CT024 222 COG2890 HemK, Methylase of polypeptide chain release factors Translation, ribosomal structure and biogenesis 15604844 Common rplM 50S ribosomal protein L13 CT125 229 COG0102 RplM, Ribosomal protein L13 Translation, ribosomal structure and biogenesis 15604788 Common ytgC Integral Membrane Protein CT069 170 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15605007 Common clpC ClpC Protease ATPase CT286 217 COG0542 ClpA, ATPases with chaperone activity, ATP-binding subunit Posttranslational modification, protein turnover, chaperones 15604839 Pathogen - C. psittaci hypothetical protein CT120 1 None None None 15605502 Common ybeB iojap superfamily ortholog CT769 199 COG0799 COG0799, Uncharacterized homolog of plant Iojap protein Function unknown 15604830 Common groES co-chaperonin GroES CT111 213 COG0234 GroS, Co-chaperonin GroES (HSP10) Posttranslational modification, protein turnover, chaperones 15605170 Pathogen omcA 9kDa-Cysteine-Rich Lipoprotein CT444 2 None None None 15604857 Common - Dipeptidase CT138 58 COG2355 COG2355, Zn-dependent dipeptidase, microsomal dipeptidase homolog Amino acid transport and metabolism 15604945 Pathogen - hypothetical protein CT224 1 None None None 15604924 Common ybhI Dicarboxylate Translocator CT204 94 COG0471 CitT, Di- and tricarboxylate transporters Inorganic ion transport and metabolism 15604824 Pathogen - hypothetical protein CT105 2 None None None 15604744 Common rpsP 30S ribosomal protein S16 CT026 203 COG0228 RpsP, Ribosomal protein S16 Translation, ribosomal structure and biogenesis 15605421 Common parB Chromosome Partitioning Protein CT688 185 COG1475 Spo0J, Predicted transcriptional regulators Transcription 15605366 Pathogen - hypothetical protein CT635 2 None None None 15605110 Common ycfF Hit Family Hydrolase CT385 184 COG0537 Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only 15605136 Common lpxB lipid-A-disaccharide synthase CT411 139 COG0763 LpxB, Lipid A disaccharide synthetase Cell envelope biogenesis, outer membrane 15604896 Common dsbB putative disulfide oxidoreductase CT176 21 COG1495 DsbB, Disulfide bond formation protein DsbB Posttranslational modification, protein turnover, chaperones 15605119 Common hrcA heat-inducible transcription repressor CT394 150 COG1420 HrcA, Transcriptional regulator of heat shock gene Transcription 15605506 Common ldh Leucine Dehydrogenase CT773 123 COG0334 GdhA, Glutamate dehydrogenase/leucine dehydrogenase Amino acid transport and metabolism 15605413 Common rpsB 30S ribosomal protein S2 CT680 229 COG0052 RpsB, Ribosomal protein S2 Translation, ribosomal structure and biogenesis 15605086 Common lysC aspartate kinase CT362 234 COG0527 LysC, Aspartokinases Amino acid transport and metabolism 15605015 Common sodM Superoxide Dismutase (Mn) CT294 208 COG0605 SodA, Superoxide dismutase Inorganic ion transport and metabolism 15605022 Common pknD serine/threonine-protein kinase CT301 152 COG0515 SPS1, Serine/threonine protein kinase General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair 15605260 Common lpxA UDP-N-acetylglucosamine acyltransferase CT531 162 COG1043 LpxA, Acyl- acyl carrier protein 15604806 Common malQ 4-alpha glucanotransferase CT087 120 COG1640 MalQ, 4-alpha-glucanotransferase Carbohydrate transport and metabolism 15604981 Pathogen - hypothetical protein CT260 3 COG5465 COG5465, Uncharacterized conserved protein Function unknown 15604728 Common htrB lipid A biosynthesis lauroyl acyltransferase CT010 38 COG1560 HtrB, Lauroyl/myristoyl acyltransferase Cell envelope biogenesis, outer membrane 15605383 Pathogen - hypothetical protein CT651 2 None None None 15605000 Common nqr3 Na(+)-translocating NADH-quinone reductase subunit C CT279 45 COG2869 NqrC, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC Energy production and conversion 15605212 Pathogen - hypothetical protein CT484 3 COG4783 COG4783, Putative Zn-dependent protease, contains TPR repeats General function prediction only 15605612 Pathogen secG preprotein translocase subunit SecG CT351a 3 COG1314 SecG, Preprotein translocase subunit SecG Intracellular trafficking and secretion 15605177 Common yaeS YaeS family CT450 242 COG0020 UppS, Undecaprenyl pyrophosphate synthase Lipid metabolism 15605405 Pathogen fliN type III secretion system protein CT672 3 COG1886 FliN, Flagellar motor switch/type III secretory pathway protein Cell motility and secretion / Intracellular trafficking and secretion 15605026 Common atpI V-type ATP synthase subunit I CT305 26 COG1269 NtpI, Archaeal/vacuolar-type H+-ATPase subunit I Energy production and conversion 15605190 Common truA tRNA pseudouridine synthase A CT463 237 COG0101 TruA, Pseudouridylate synthase Translation, ribosomal structure and biogenesis 15605577 Common pnp polynucleotide phosphorylase/polyadenylase CT842 241 COG1185 Pnp, Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) Translation, ribosomal structure and biogenesis 15605152 Common - hypothetical protein CT425 7 None None None 15605456 Common yjbC predicted pseudouridine synthase CT723 204 COG1187 RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases Translation, ribosomal structure and biogenesis 15605072 Common maf Maf-like protein CT349 195 COG0424 Maf, Nucleotide-binding protein implicated in inhibition of septum formation Cell division and chromosome partitioning 15605356 Common nfo endonuclease IV CT625 97 COG0648 Nfo, Endonuclease IV DNA replication, recombination, and repair 15604851 Common - hypothetical protein CT132 11 COG1295 Rbn, Predicted membrane protein Function unknown 15605512 Pathogen - hypothetical protein CT779 2 None None None 15604972 Common - putative inner membrane protein translocase component YidC CT251 211 COG0706 YidC, Preprotein translocase subunit YidC Intracellular trafficking and secretion 15605303 Common pepP Aminopeptidase P CT574 248 COG0006 PepP, Xaa-Pro aminopeptidase Amino acid transport and metabolism 15605205 Common oppC_2 Oligopeptide Permease CT478 219 COG1173 DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Amino acid transport and metabolism / Inorganic ion transport and metabolism 15604753 Common - Biotin Protein Ligase CT035 6 COG4285 COG4285, Uncharacterized conserved protein Function unknown 15605498 Common rsbV_2 Sigma Regulatory Factor CT765 49 COG1366 SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) Signal transduction mechanisms 15605361 Common cpxR HTH Transcriptional Regulatory Protein and Receiver Domain CT630 145 COG0745 OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms / Transcription 15605223 Common - ADP/ATP Translocase CT495 6 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 15604990 Common murE UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CT269 214 COG0769 MurE, UDP-N-acetylmuramyl tripeptide synthase Cell envelope biogenesis, outer membrane 15605167 Common tsp Tail-Specific Protease CT441 181 COG0793 Prc, Periplasmic protease Cell envelope biogenesis, outer membrane 15605446 Pathogen porB Outer Membrane Protein Analog CT713 2 None None None 15605607 Common pmpG Putative Outer Membrane Protein G CT871 3 None None None 15605466 Pathogen - hypothetical protein CT733 2 None None None 15605200 Common - hypothetical protein CT473 180 COG0759 COG0759, Uncharacterized conserved protein Function unknown 15605521 Pathogen - [leader (60) peptide-periplasmic] CT788 2 None None None 15605254 Common rplB 50S ribosomal protein L2 CT525 248 COG0090 RplB, Ribosomal protein L2 Translation, ribosomal structure and biogenesis 15604810 Common yscU type III secretion system protein CT091 129 COG1377 FlhB, Flagellar biosynthesis pathway, component FlhB Cell motility and secretion / Intracellular trafficking and secretion 15605322 Common sdhC Succinate Dehydrogenase CT593 5 COG2009 SdhC, Succinate dehydrogenase/fumarate reductase, cytochrome b subunit Energy production and conversion 15605377 Common - hypothetical protein CT645 29 COG0762 COG0762, Predicted integral membrane protein Function unknown 15605579 Common yfhC cytosine deaminase CT844 210 COG0590 CumB, Cytosine/adenosine deaminases Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis 15605399 Pathogen - hypothetical protein CT666 2 None None None 15605423 Common dppD ABC Transport ATPase CT690 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15605281 Pathogen - hypothetical protein CT552 2 None None None 15604878 Pathogen - hypothetical protein CT159 1 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15605288 Common yscJ Yop proteins translocation lipoprotein J CT559 63 COG4669 EscJ, Type III secretory pathway, lipoprotein EscJ Intracellular trafficking and secretion 15604848 Common glnP ABC Amino Acid Transporter Permease CT129 173 COG0765 HisM, ABC-type amino acid transport system, permease component Amino acid transport and metabolism 15604822 Common - HAD superfamily hydrolase/phosphatase CT103 24 COG0561 Cof, Predicted hydrolases of the HAD superfamily General function prediction only 15605181 Common argS arginyl-tRNA synthetase CT454 248 COG0018 ArgS, Arginyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605535 Common rpsF 30S ribosomal protein S6 CT801 106 COG0360 RpsF, Ribosomal protein S6 Translation, ribosomal structure and biogenesis 15605372 Common recC Exodeoxyribonuclease V, Gamma CT640 15 COG1330 RecC, Exonuclease V gamma subunit DNA replication, recombination, and repair 15605036 Common rpoB DNA-directed RNA polymerase subunit beta CT315 249 COG0085 RpoB, DNA-directed RNA polymerase, beta subunit/140 kD subunit Transcription 15605474 Common yajC preprotein translocase subunit YajC CT741 48 COG1862 YajC, Preprotein translocase subunit YajC Intracellular trafficking and secretion 15604871 Common ycfV ABC Transporter ATPase CT152 249 COG1136 SalX, ABC-type antimicrobial peptide transport system, ATPase component Defense mechanisms 15605527 Common dnaG DNA primase CT794 215 COG0358 DnaG, DNA primase (bacterial type) DNA replication, recombination, and repair 15604933 Common rpiA ribose-5-phosphate isomerase A CT213 165 COG0120 RpiA, Ribose 5-phosphate isomerase Carbohydrate transport and metabolism 15605488 Common groEL_3 HSP60 CT755 217 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15605568 Common infC translation initiation factor IF-3 CT833 212 COG0290 InfC, Translation initiation factor 3 (IF-3) Translation, ribosomal structure and biogenesis 15605096 Pathogen - hypothetical protein CT372 2 COG3659 OprB, Carbohydrate-selective porin Cell envelope biogenesis, outer membrane 15604734 Pathogen - hypothetical protein CT016 3 None None None 15605055 Common pykF pyruvate kinase CT332 220 COG0469 PykF, Pyruvate kinase Carbohydrate transport and metabolism 15605335 Common ybbC hypothetical protein CT605 51 COG3876 COG3876, Uncharacterized protein conserved in bacteria Function unknown 15605315 Common uvrB excinuclease ABC subunit B CT586 227 COG0556 UvrB, Helicase subunit of the DNA excision repair complex DNA replication, recombination, and repair 15605124 Common yrbH GutQ/KpsF Family Sugar-P Isomerase CT399 146 COG0794 GutQ, Predicted sugar phosphate isomerase involved in capsule formation Cell envelope biogenesis, outer membrane 15604889 Common trpB tryptophan synthase subunit beta CT170 224 COG0133 TrpB, Tryptophan synthase beta chain Amino acid transport and metabolism 15605237 Common rs11 30S ribosomal protein S11 CT508 247 COG0100 RpsK, Ribosomal protein S11 Translation, ribosomal structure and biogenesis 15605154 Common - hypothetical protein CT427 31 COG1427 COG1427, Predicted periplasmic solute-binding protein General function prediction only 15605333 Common ahpC Thio-specific Antioxidant (TSA) Peroxidase CT603 228 COG0450 AhpC, Peroxiredoxin Posttranslational modification, protein turnover, chaperones 15604794 Common dnaN DNA polymerase III subunit beta CT075 215 COG0592 DnaN, DNA polymerase sliding clamp subunit (PCNA homolog) DNA replication, recombination, and repair 15605411 Common pyrH uridylate kinase CT678 240 COG0528 PyrH, Uridylate kinase Nucleotide transport and metabolism 15605027 Common atpD V-type ATP synthase subunit D CT306 9 COG1394 NtpD, Archaeal/vacuolar-type H+-ATPase subunit D Energy production and conversion 15605192 Pathogen - hypothetical protein CT465 2 None None None 15604804 Common - hypothetical protein CT085 152 COG0043 UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases Coenzyme metabolism 15605492 Common nlpD Muramidase (invasin repeat family) CT759 39 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 15605217 Common glgC Glucose-1-P Adenyltransferase CT489 173 COG0448 GlgC, ADP-glucose pyrophosphorylase Carbohydrate transport and metabolism 15605561 Common pssA CDP-diacylglycerol-serine-O-phosphatidyltransferase CT826 145 COG1183 PssA, Phosphatidylserine synthase Lipid metabolism 15605273 Common uhpC Hexosphosphate Transport CT544 117 COG2271 UhpC, Sugar phosphate permease Carbohydrate transport and metabolism 15605266 Common yjeE (ATPase or Kinase) CT537 176 COG0802 COG0802, Predicted ATPase or kinase General function prediction only 15605199 Common - hypothetical protein CT472 25 COG1723 COG1723, Uncharacterized conserved protein Function unknown 15605389 Pathogen - hypothetical protein CT656 2 None None None 15605403 Pathogen - hypothetical protein CT670 3 None None None 15605501 Common - hypothetical protein CT768 6 None None None 15604725 Pathogen - hypothetical protein CT007 3 None None None 15605092 Common aroC chorismate synthase CT368 227 COG0082 AroC, Chorismate synthase Amino acid transport and metabolism 15604941 Common yqfU hypothetical protein CT221 47 COG1284 COG1284, Uncharacterized conserved protein Function unknown 15605006 Common lplA_1 Lipoate Protein Ligase CT285 23 COG0095 LplA, Lipoate-protein ligase A Coenzyme metabolism 15605048 Pathogen - hypothetical protein CT326.1 1 None None None 15604849 Common glnQ ABC Amino Acid Transporter ATPase CT130 249 COG1126 GlnQ, ABC-type polar amino acid transport system, ATPase component Amino acid transport and metabolism 15605047 Pathogen - hypothetical protein CT326 2 None None None 15604859 Common ypdP hypothetical protein CT140 38 COG1738 COG1738, Uncharacterized conserved protein Function unknown 15605138 Common pmpB Putative outer membrane protein B CT413 21 None None None 15605448 Common - AgX-1 Homolog-UDP-Glucose Pyrophosphorylase CT715 7 COG4284 COG4284, UDP-glucose pyrophosphorylase Carbohydrate transport and metabolism 15605558 Common htrA DO Serine Protease CT823 223 COG0265 DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Posttranslational modification, protein turnover, chaperones 15605100 Common mdhC malate dehydrogenase CT376 72 COG0039 Mdh, Malate/lactate dehydrogenases Energy production and conversion 15605093 Common aroB 3-dehydroquinate synthase CT369 205 COG0337 AroB, 3-dehydroquinate synthetase Amino acid transport and metabolism 15605011 Common ptsN_1 PTS IIA Protein + HTH DNA-Binding Domain CT290 103 COG1762 PtsN, Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) Carbohydrate transport and metabolism / Signal transduction mechanisms 15604911 Pathogen - hypothetical protein CT191 3 None None None 15605597 Pathogen - hypothetical protein CT861 2 COG2814 AraJ, Arabinose efflux permease Carbohydrate transport and metabolism 15604786 Common ytgA Solute Protein Binding Family CT067 141 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 15605159 Common glyA serine hydroxymethyltransferase CT432 245 COG0112 GlyA, Glycine/serine hydroxymethyltransferase Amino acid transport and metabolism 15604842 Common accB acetyl-CoA carboxylase biotin carboxyl carrier protein subunit CT123 174 COG0511 AccB, Biotin carboxyl carrier protein Lipid metabolism 15605109 Pathogen - hypothetical protein CT384 3 None None None 15605161 Common ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CT434 187 COG0245 IspF, 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Lipid metabolism 15605550 Common mrsA_2 Phosphoglucomutase CT815 242 COG1109 {ManB}, Phosphomannomutase Carbohydrate transport and metabolism 15605575 Common mesJ PP-loop superfamily ATPase CT840 214 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 15605589 Common - hypothetical protein CT853 3 COG2095 MarC, Multiple antibiotic transporter Intracellular trafficking and secretion 15604764 Common pepA leucyl aminopeptidase CT045 188 COG0260 PepB, Leucyl aminopeptidase Amino acid transport and metabolism 15605410 Common frr ribosome recycling factor CT677 216 COG0233 Frr, Ribosome recycling factor Translation, ribosomal structure and biogenesis 15604773 Common kgd alpha-ketoglutarate decarboxylase CT054 150 COG0567 SucA, 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes Energy production and conversion 15605439 Common clpP ATP-dependent Clp protease proteolytic subunit CT706 211 COG0740 ClpP, Protease subunit of ATP-dependent Clp proteases Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion 15605598 Common lcrH_2 Low Calcium Response Protein H CT862 20 COG5010 TadD, Flp pilus assembly protein TadD, contains TPR repeats Intracellular trafficking and secretion 15605396 Pathogen - hypothetical protein CT663 2 None None None 15605438 Common clpX ATP-dependent protease ATP-binding subunit CT705 228 COG1219 ClpX, ATP-dependent protease Clp, ATPase subunit Posttranslational modification, protein turnover, chaperones 15604926 Common - (predicted acyltransferase family) CT206 8 COG1073 COG1073, Hydrolases of the alpha/beta superfamily General function prediction only 15604812 Common ribF bifunctional riboflavin kinase/FMN adenylyltransferase CT093 211 COG0196 RibF, FAD synthase Coenzyme metabolism 15605252 Common rplV 50S ribosomal protein L22 CT523 215 COG0091 RplV, Ribosomal protein L22 Translation, ribosomal structure and biogenesis 15605077 Common ksgA dimethyladenosine transferase CT354 248 COG0030 KsgA, Dimethyladenosine transferase (rRNA methylation) Translation, ribosomal structure and biogenesis 15604865 Common ligA NAD-dependent DNA ligase LigA CT146 219 COG0272 Lig, NAD-dependent DNA ligase (contains BRCT domain type II) DNA replication, recombination, and repair 15605338 Common ung uracil-DNA glycosylase CT607 128 COG0692 Ung, Uracil DNA glycosylase DNA replication, recombination, and repair 15605127 Common lpxK tetraacyldisaccharide 4'-kinase CT402 107 COG1663 LpxK, Tetraacyldisaccharide-1-P 4'-kinase Cell envelope biogenesis, outer membrane 15604894 Pathogen - hypothetical protein CT174 1 None None None 15604834 Pathogen - hypothetical protein CT115 1 None None None 15605149 Common - possible metalloenzyme CT422 36 COG0319 COG0319, Predicted metal-dependent hydrolase General function prediction only 15605355 Common mviN Integral Membrane Protein CT624 174 COG0728 MviN, Uncharacterized membrane protein, putative virulence factor General function prediction only 15605120 Common grpE HSP-70 Cofactor CT395 186 COG0576 GrpE, Molecular chaperone GrpE (heat shock protein) Posttranslational modification, protein turnover, chaperones 15605350 Pathogen - hypothetical protein CT619 2 None None None 15604939 Common ubiA prenyltransferase CT219 126 COG0382 UbiA, 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Coenzyme metabolism 15605053 Pathogen - hypothetical protein CT330 2 None None None 15604787 Common ytgB_1 rRNA methylase CT068 249 COG1121 ZnuC, ABC-type Mn/Zn transport systems, ATPase component Inorganic ion transport and metabolism 15604867 Common mhpA Monooxygenase CT148 8 COG0654 UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Coenzyme metabolism / Energy production and conversion 15605469 Common ybcL hypothetical protein CT736 128 COG1881 COG1881, Phospholipid-binding protein General function prediction only 15605014 Common accD acetyl-CoA carboxylase subunit beta CT293 220 COG0777 AccD, Acetyl-CoA carboxylase beta subunit Lipid metabolism 15604921 Common oppD Oligopeptide Transport ATPase CT201 249 COG0444 DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Amino acid transport and metabolism / Inorganic ion transport and metabolism 15605220 Common coaE dephospho-CoA kinase CT492 200 COG0237 CoaE, Dephospho-CoA kinase Coenzyme metabolism 15605242 Common rplR 50S ribosomal protein L18 CT513 216 COG0256 RplR, Ribosomal protein L18 Translation, ribosomal structure and biogenesis 15605035 Common rpoC DNA-directed RNA polymerase subunit beta' CT314 249 COG0086 RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit Transcription 15605032 Pathogen - hypothetical protein CT311 2 None None None 15605249 Pathogen rpmC 50S ribosomal protein L29 CT520 2 COG0255 RpmC, Ribosomal protein L29 Translation, ribosomal structure and biogenesis 15605517 Common rnpA ribonuclease P CT784 38 COG0594 RnpA, RNase P protein component Translation, ribosomal structure and biogenesis 15605279 Pathogen - hypothetical protein CT550 3 None None None 15605321 Common sdhA succinate dehydrogenase CT592 223 COG1053 SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Energy production and conversion 15605140 Common yebL Solute-binding protein CT415 136 COG0803 LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin Inorganic ion transport and metabolism 15604772 Pathogen - hypothetical protein CT053 3 None None None 15605510 Common bioF 8-amino-7-oxononanoate synthase CT777 189 COG0156 BioF, 7-keto-8-aminopelargonate synthetase and related enzymes Coenzyme metabolism 15604970 Pathogen - hypothetical protein CT249 1 None None None 15605519 Pathogen rpmJ 50S ribosomal protein L36 CT786 3 None None None 15604964 Common lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CT243 158 COG1044 LpxD, UDP-3-O- 3-hydroxymyristoyl 15605533 Common ctc 50S ribosomal protein L25/general stress protein Ctc CT799 154 COG1825 RplY, Ribosomal protein L25 (general stress protein Ctc) Translation, ribosomal structure and biogenesis 15605371 Common recB Exodeoxyribonuclease V, Beta CT639 226 COG1074 RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) DNA replication, recombination, and repair 15605163 Common rpsJ 30S ribosomal protein S10 CT436 247 COG0051 RpsJ, Ribosomal protein S10 Translation, ribosomal structure and biogenesis 15604988 Common ihfA Integration Host Factor Alpha CT267 163 COG0776 HimA, Bacterial nucleoid DNA-binding protein DNA replication, recombination, and repair 15604950 Pathogen - hypothetical protein CT229 1 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15605187 Common - SWIB (YM74) complex protein CT460 16 COG5531 COG5531, SWIB-domain-containing proteins implicated in chromatin remodeling Chromatin structure and dynamics 15605468 Common dagA_2 D-Ala/Gly Permease CT735 114 COG1115 AlsT, Na+/alanine symporter Amino acid transport and metabolism 15604719 Pathogen - hypothetical protein CT001 2 COG2155 COG2155, Uncharacterized conserved protein Function unknown 15605486 Pathogen - hypothetical protein CT753 2 None None None 15605069 Common elaC ribonuclease Z CT346 98 COG1234 ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III General function prediction only 15605317 Common rbsU sigma regulatory family protein-PP2C phosphatase (RsbW antagonist) CT588 93 COG2208 RsbU, Serine phosphatase RsbU, regulator of sigma subunit Signal transduction mechanisms / Transcription 15605329 Common tolB translocation protein TolB CT599 141 COG0823 TolB, Periplasmic component of the Tol biopolymer transport system Intracellular trafficking and secretion 15605401 Pathogen - hypothetical protein CT668 2 None None None 15605604 Pathogen - Membrane Thiol Protease (predicted) CT868 2 COG5160 ULP1, Protease, Ulp1 family Posttranslational modification, protein turnover, chaperones 15605300 Common gspE Gen. Secretion Protein E CT571 211 COG2804 PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Cell motility and secretion / Intracellular trafficking and secretion 15604876 Common - Phospholipase D Endonuclease Superfamily CT157 23 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15605179 Common cmk cytidylate kinase CT452 206 COG0283 Cmk, Cytidylate kinase Nucleotide transport and metabolism 15605309 Common - hypothetical protein CT580 9 COG0697 RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only 15604751 Common recD_1 Exodeoxyribonuclease V, Alpha CT033 146 COG0507 RecD, ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member DNA replication, recombination, and repair 15605231 Common ruvC Holliday junction resolvase CT502 197 COG0817 RuvC, Holliday junction resolvasome, endonuclease subunit DNA replication, recombination, and repair 15604977 Common - Hypothetical protein containing CBS domains CT256 213 COG1253 TlyC, Hemolysins and related proteins containing CBS domains General function prediction only 15605038 Common rplJ 50S ribosomal protein L10 CT317 130 COG0244 RplJ, Ribosomal protein L10 Translation, ribosomal structure and biogenesis 15605207 Common oppA_4 oligopeptide Binding Lipoprotein CT480 148 COG0747 DdpA, ABC-type dipeptide transport system, periplasmic component Amino acid transport and metabolism 15604732 Common cydB Cytochrome Oxidase Subunit II CT014 156 COG1294 AppB, Cytochrome bd-type quinol oxidase, subunit 2 Energy production and conversion 15605209 Common - hypothetical protein CT481 3 COG0726 CDA1, Predicted xylanase/chitin deacetylase Carbohydrate transport and metabolism 15604815 Common infB translation initiation factor IF-2 CT096 249 COG0532 InfB, Translation initiation factor 2 (IF-2; GTPase) Translation, ribosomal structure and biogenesis 15605523 Common - hypothetical protein CT790 7 COG1302 COG1302, Uncharacterized protein conserved in bacteria Function unknown 15605081 Pathogen - hypothetical protein CT357 1 None None None 15605133 Common lspA lipoprotein signal peptidase CT408 175 COG0597 LspA, Lipoprotein signal peptidase Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion 15604935 Common dhnA fructose-bisphosphate aldolase CT215 55 COG1830 FbaB, DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes Carbohydrate transport and metabolism 15605347 Pathogen - hypothetical protein CT616 3 COG1196 Smc, Chromosome segregation ATPases Cell division and chromosome partitioning 15605344 Common folP Dihydropteroate Synthase CT613 215 COG0294 FolP, Dihydropteroate synthase and related enzymes Coenzyme metabolism 15604850 Pathogen - (Possible Transmembrane Protein) CT131 3 None None None 15604996 Common dnaA chromosomal replication initiation protein CT275 213 COG0593 DnaA, ATPase involved in DNA replication initiation DNA replication, recombination, and repair 15605552 Common tyrP_1 Tyrosine Transport CT817 31 COG0814 SdaC, Amino acid permeases Amino acid transport and metabolism 15604723 Pathogen - hypothetical protein CT005 2 None None None 15605001 Common nqr4 Na(+)-translocating NADH-quinone reductase subunit D CT280 76 COG1347 NqrD, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD Energy production and conversion 15604899 Pathogen - hypothetical protein CT179 1 None None None 15605264 Common yciA Acyl-CoA Thioester Hydrolase CT535 134 COG1607 COG1607, Acyl-CoA hydrolase Lipid metabolism 15605090 Common aroA 3-phosphoshikimate 1-carboxyvinyltransferase CT366 225 COG0128 AroA, 5-enolpyruvylshikimate-3-phosphate synthase Amino acid transport and metabolism 15604796 Common yojL hypothetical protein CT077 120 COG1477 ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis Coenzyme metabolism 15605004 Pathogen - hypothetical protein CT283 3 None None None 15605452 Pathogen fliF type III secretion system protein CT719 2 COG1536 FliG, Flagellar motor switch protein Cell motility and secretion 15605505 Common ppa inorganic pyrophosphatase CT772 186 COG0221 Ppa, Inorganic pyrophosphatase Energy production and conversion 15604829 Common groEL chaperonin GroEL CT110 247 COG0459 GroL, Chaperonin GroEL (HSP60 family) Posttranslational modification, protein turnover, chaperones 15605114 Common - hypothetical protein CT389 6 None None None 15604729 Common - hypothetical protein CT011 4 None None None 15605215 Common yhhF Methylase CT487 213 COG0742 COG0742, N6-adenine-specific methylase DNA replication, recombination, and repair 15604820 Pathogen - hypothetical protein CT101 2 None None None 15605490 Common mraY phospho-N-acetylmuramoyl-pentapeptide-transferase CT757 227 COG0472 Rfe, UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase Cell envelope biogenesis, outer membrane 15605029 Common atpA V-type ATP synthase subunit A CT308 247 COG1155 NtpA, Archaeal/vacuolar-type H+-ATPase subunit A Energy production and conversion 15605230 Common ruvA Holliday junction DNA helicase motor protein CT501 211 COG0632 RuvA, Holliday junction resolvasome, DNA-binding subunit DNA replication, recombination, and repair 15605225 Pathogen - hypothetical protein CT496.1 1 None None None 15605494 Common murG N-acetylglucosaminyl transferase CT761 207 COG0707 MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase Cell envelope biogenesis, outer membrane 15605156 Pathogen - hypothetical protein CT429 3 None None None 15605563 Common nrdB ribonucleotide-diphosphate reductase subunit beta CT828 162 COG0208 NrdF, Ribonucleotide reductase, beta subunit Nucleotide transport and metabolism 15604983 Common - hypothetical protein CT262 35 COG2107 COG2107, Predicted periplasmic solute-binding protein General function prediction only 15605195 Common atoC 2-component regulatory system-ATPase CT468 208 COG2204 AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Signal transduction mechanisms 15605364 Common hemB delta-aminolevulinic acid dehydratase CT633 220 COG0113 HemB, Delta-aminolevulinic acid dehydratase Coenzyme metabolism 15605442 Common mreB Rod Shape Protein-Sugar Kinase CT709 234 COG1077 MreB, Actin-like ATPase involved in cell morphogenesis Cell division and chromosome partitioning 15605099 Common - predicted D-Amino Acid Dehydrogenase CT375 12 COG0665 DadA, Glycine/D-amino acid oxidases (deaminating) Amino acid transport and metabolism 15605591 Common fumC fumarate hydratase CT855 229 COG0114 FumC, Fumarase Energy production and conversion 15605529 Pathogen - hypothetical protein CT795 2 None None None 15605018 Common rnc ribonuclease III CT297 217 COG0571 Rnc, dsRNA-specific ribonuclease Transcription 15604766 Common - hypothetical protein CT047 5 COG1466 HolA, DNA polymerase III, delta subunit DNA replication, recombination, and repair 15604917 Common gcp_1 O-sialoglycoprotein endopeptidase CT197 249 COG0533 QRI7, Metal-dependent proteases with possible chaperone activity Posttranslational modification, protein turnover, chaperones 15605545 Common plsX fatty acid/phospholipid synthesis protein CT811 177 COG0416 PlsX, Fatty acid/phospholipid biosynthesis enzyme Lipid metabolism 15605079 Common yyaL multidomain protein family CT356 105 COG1331 COG1331, Highly conserved protein containing a thioredoxin domain Posttranslational modification, protein turnover, chaperones 15605145 Common rplU 50S ribosomal protein L21 CT420 189 COG0261 RplU, Ribosomal protein L21 Translation, ribosomal structure and biogenesis 15605400 Pathogen - hypothetical protein CT667 3 None None None 15604999 Common nqr2 Na(+)-translocating NADH-quinone reductase subunit B CT278 73 COG1805 NqrB, Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB Energy production and conversion 15605129 Common - SAM dependent methyltransferase CT404 114 COG1092 COG1092, Predicted SAM-dependent methyltransferases General function prediction only 15605429 Pathogen - hypothetical protein CT696 2 None None None 15605433 Common - hypothetical protein CT700 3 COG1729 COG1729, Uncharacterized protein conserved in bacteria Function unknown 15605293 Common yyscT Yop proteins translocation protein T CT564 118 COG4791 EscT, Type III secretory pathway, component EscT Intracellular trafficking and secretion 15605462 Common serS seryl-tRNA synthetase CT729 243 COG0172 SerS, Seryl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605340 Common rpoN RNA polymerase factor sigma-54 CT609 143 COG1508 RpoN, DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog Transcription 15605102 Common pgi glucose-6-phosphate isomerase CT378 210 COG0166 Pgi, Glucose-6-phosphate isomerase Carbohydrate transport and metabolism 15605270 Common mip FKBP-type peptidyl-prolyl cis-trans isomerase CT541 136 COG0545 FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 Posttranslational modification, protein turnover, chaperones 15605380 Common - hypothetical protein CT648 18 COG2849 COG2849, Uncharacterized protein conserved in bacteria Function unknown 15604840 Common araD ribulose-phosphate 3-epimerase CT121 216 COG0036 Rpe, Pentose-5-phosphate-3-epimerase Carbohydrate transport and metabolism 15605428 Pathogen - hypothetical protein CT695 2 None None None 15604784 Common - ADP/ATP Translocase CT065 18 COG3202 COG3202, ATP/ADP translocase Energy production and conversion 15605387 Pathogen - hypothetical protein CT654 2 None None None 15604775 Common - hypothetical protein CT056 144 COG1496 COG1496, Uncharacterized conserved protein Function unknown 15605233 Pathogen - hypothetical protein CT504 3 None None None 15605531 Common pgsA_2 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CT797 202 COG0558 PgsA, Phosphatidylglycerophosphate synthase Lipid metabolism 15605515 Common cysS cysteinyl-tRNA synthetase CT782 241 COG0215 CysS, Cysteinyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15604885 Common - hypothetical protein CT166 5 None None None 15605188 Common yaeI phosphohydrolase CT461 81 COG1408 COG1408, Predicted phosphohydrolases General function prediction only 15605310 Common thrS threonyl-tRNA synthetase CT581 249 COG0441 ThrS, Threonyl-tRNA synthetase Translation, ribosomal structure and biogenesis 15605478 Common hemG protoporphyrinogen oxidase CT745 44 COG1232 HemY, Protoporphyrinogen oxidase Coenzyme metabolism 15604928 Common gseA 3-deoxy-D-manno-octulosonic-acid transferase CT208 127 COG1519 KdtA, 3-deoxy-D-manno-octulosonic-acid transferase Cell envelope biogenesis, outer membrane 15604937 Common ydaO PP-Loop Superfamily ATPase CT217 113 COG0037 MesJ, Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Cell division and chromosome partitioning 15604909 Common gyrA_1 DNA gyrase subunit A CT189 230 COG0188 GyrA, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit DNA replication, recombination, and repair 15605240 Common rplO 50S ribosomal protein L15 CT511 214 COG0200 RplO, Ribosomal protein L15 Translation, ribosomal structure and biogenesis 15604962 Common yaeT Omp85 Analog CT241 153 COG4775 COG4775, Outer membrane protein/protective antigen OMA87 Cell envelope biogenesis, outer membrane 15605331 Pathogen papQ Invasin repeat family phosphatase CT601 2 COG1388 LytE, FOG: LysM repeat Cell envelope biogenesis, outer membrane 15605483 Common tktB transketolase CT750 222 COG0021 TktA, Transketolase Carbohydrate transport and metabolism 15605258 Pathogen - hypothetical protein CT529 2 None None None 15605142 Common - (Metal Transport Protein) CT417 180 COG1108 ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components Inorganic ion transport and metabolism 15605336 Common yggV putative deoxyribonucleotide triphosphate pyrophosphatase CT606 234 COG0127 COG0127, Xanthosine triphosphate pyrophosphatase Nucleotide transport and metabolism 15605219 Common rho transcription termination factor Rho CT491 206 COG1158 Rho, Transcription termination factor Transcription 15605319 Pathogen - hypothetical protein CT590 3 None None None 15604900 Common tauB ABC Transport ATPase (Nitrate/Fe) CT180 249 COG1116 TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Inorganic ion transport and metabolism 15605112 Common - hypothetical protein CT387 46 COG1611 COG1611, Predicted Rossmann fold nucleotide-binding protein General function prediction only 15605417 Common - cysteine desulfurase activator complex subunit SufB CT684 184 COG0719 SufB, ABC-type transport system involved in Fe-S cluster assembly, permease component Posttranslational modification, protein turnover, chaperones 15605073 Common - hypothetical protein CT350 4 COG1413 COG1413, FOG: HEAT repeat Energy production and conversion 15605538 Common ychB 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase CT804 158 COG1947 IspE, 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase Lipid metabolism 15604930 Common hemL glutamate-1-semialdehyde aminotransferase CT210 237 COG0001 HemL, Glutamate-1-semialdehyde aminotransferase Coenzyme metabolism 15605342 Common - hypothetical protein CT611 34 COG1478 COG1478, Uncharacterized conserved protein Function unknown 15605479 Common hemN_2 coproporphyrinogen III oxidase CT746 205 COG0635 HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Coenzyme metabolism 15604969 Common glgP Glycogen Phosphorylase CT248 137 COG0058 GlgP, Glucan phosphorylase Carbohydrate transport and metabolism 15604730 Common ybbP hypothetical protein CT012 67 COG1624 COG1624, Uncharacterized conserved protein Function unknown 15604892 Pathogen - hypothetical protein CT172.1 1 None None None 15604797 Common folD Methylene Tetrahydrofolate Dehydrogenase CT078 224 COG0190 FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase Coenzyme metabolism 15605227 Common gidA tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA CT498 191 COG0445 GidA, NAD/FAD-utilizing enzyme apparently involved in cell division Cell division and chromosome partitioning 15604817 Common rpsA 30S ribosomal protein S1 CT098 218 COG0539 RpsA, Ribosomal protein S1 Translation, ribosomal structure and biogenesis 15605299 Common gspF Gen. Secretion Protein F CT570 141 COG1459 PulF, Type II secretory pathway, component PulF Cell motility and secretion / Intracellular trafficking and secretion 15605353 Pathogen - CHLPN 76kDa Homolog CT622 4 None None None 15604852 Common - predicted rRNA methylase CT133 7 COG2226 UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis Coenzyme metabolism 15604975 Common - hypothetical protein CT254 23 None None None 15604739 Pathogen - hypothetical protein CT021 3 None None None 15604994 Pathogen - hypothetical protein CT273 2 None None None 15604790 Common yaeM 1-deoxy-D-xylulose 5-phosphate reductoisomerase CT071 184 COG0743 Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase Lipid metabolism 15605185 Common YhhY Amino Group Acetyl Transferase CT458 11 COG0456 RimI, Acetyltransferases General function prediction only 15604874 Pathogen - Phospholipase D Endonuclease Superfamily CT155 3 COG1502 Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Lipid metabolism 15604952 Common - Sodium-dependent amino acid transporter CT231 88 COG0733 COG0733, Na+-dependent transporters of the SNF family General function prediction only 15605063 Common pdhA/B (pyruvate) Oxoisovalerate Dehydrogenase Alpha and Beta Fusion CT340 187 COG0022 AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Energy production and conversion 15604862 Pathogen - hypothetical protein CT143 2 None None None 15605202 Common pheT phenylalanyl-tRNA synthetase subunit beta CT475 233 COG0072 PheT, Phenylalanyl-tRNA synthetase beta subunit Translation, ribosomal structure and biogenesis 15605395 Common hemA glutamyl-tRNA reductase CT662 172 COG0373 HemA, Glutamyl-tRNA reductase Coenzyme metabolism 15605327 Common exbD Biopolymer Transport Protein CT597 13 COG0848 ExbD, Biopolymer transport protein Intracellular trafficking and secretion 15605285 Pathogen - hypothetical protein CT556 3 None None None 15604749 Pathogen - hypothetical protein CT031 2 None None None 15604979 Common yhfO NifS family of pyridoxal phosphate-dependent enzyme CT258 230 COG1104 NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes Amino acid transport and metabolism 15605044 Common infA translation initiation factor IF-1 CT323 213 COG0361 InfA, Translation initiation factor 1 (IF-1) Translation, ribosomal structure and biogenesis 15605088 Common dapB dihydrodipicolinate reductase CT364 216 COG0289 DapB, Dihydrodipicolinate reductase Amino acid transport and metabolism