version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1857 33.84 -2 2138418..2138615 - 65 145599180 - YPDSF_1898 - hypothetical protein 1858 51.72 0 2138625..2140658 - 677 145599181 - YPDSF_1899 - hypothetical protein 1859 48.41 0 2141322..2141573 - 83 145599182 - YPDSF_1900 - hypothetical protein 1860 32.16 -2 2141818..2142327 - 169 145599183 - YPDSF_1901 - hypothetical protein 1861 57.47 +1 2142329..2149876 - 2515 145599184 - YPDSF_1902 - hemolysin 1862 53.94 +1 2150080..2151768 - 562 145599185 - YPDSF_1903 - hemolysin activator protein 1863 46.79 0 2152421..2153386 - 321 145599186 - YPDSF_1904 - dioxygenase beta subunit 1864 47.29 0 2153482..2154606 - 374 145599187 - YPDSF_1905 - dioxygenase alpha subunit 1865 49.12 0 2154723..2156204 - 493 162202301 - YPDSF_1906 - putative transporter 1866 49.64 0 2156986..2158083 - 365 145599189 - YPDSF_1907 - tartrate dehydrogenase 1867 52.23 0 2158174..2159115 + 313 145599190 - YPDSF_1908 - LlysR family transcriptional regulatory protein 1868 40.50 -1 2159362..2160366 + 334 145599191 - YPDSF_1909 - LacI family transcriptional regulator 1869 51.66 0 2160499..2161491 - 330 145599192 - YPDSF_1910 - sugar transport system, permease protein 1870 46.30 0 2163019..2163936 - 305 145599193 - YPDSF_1913 - sugar binding protein precursor 1871 47.03 0 2164111..2165337 - 408 145599194 - YPDSF_1914 - zinc-binding dehydrogenase 1872 32.23 -2 2165920..2166642 - 240 145599195 - YPDSF_1915 - hypothetical protein 1873 38.86 -1 2166784..2167326 - 180 145599196 - YPDSF_1916 - hypothetical protein 1874 46.22 0 2167564..2168502 - 312 145599197 - YPDSF_1917 - membrane protein 1875 48.38 0 2168818..2169342 - 174 145599198 ompX YPDSF_1918 - outer membrane protein X 1876 50.68 0 2169747..2170634 + 295 145599199 - YPDSF_1919 - threonine and homoserine efflux system 1877 52.41 0 2170650..2171147 + 165 145599200 - YPDSF_1920 - hypothetical protein 1878 52.77 0 2171170..2171946 + 258 145599201 - YPDSF_1921 - trans-aconitate 2-methyltransferase 1879 45.44 0 2172203..2172706 + 167 145599202 - YPDSF_1922 - DNA starvation/stationary phase protection protein Dps 1880 41.67 -1 2173026..2174153 + 375 145599203 - YPDSF_1923 - hypothetical protein 1881 46.10 0 2174723..2175466 + 247 145599204 glnH YPDSF_1924 - glutamine ABC transporter periplasmic protein 1882 52.05 0 2175501..2176157 + 218 145599205 glnP YPDSF_1925 - glutamine ABC transporter permease protein 1883 49.75 0 2176067..2176876 + 269 145599206 glnQ YPDSF_1926 - glutamine ABC transporter ATP-binding protein 1884 47.95 0 2177100..2178392 - 430 145599207 - YPDSF_1927 - chemotactic transducer 1885 17.65 -2 2178878..2178979 + 33 145599208 - YPDSF_1928 - hypothetical protein 1886 49.36 0 2179161..2180171 - 336 145599209 - YPDSF_1929 - putative SAM-dependent methyltransferase 1887 45.59 0 2180459..2180719 + 86 145599210 - YPDSF_1930 - hypothetical protein 1888 38.89 -1 2180724..2180867 - 47 145599211 - YPDSF_1931 - hypothetical protein 1889 51.46 0 2181100..2182059 - 319 145599212 - YPDSF_1932 - hypothetical protein 1890 57.70 +2 2182125..2183540 - 471 145599213 - YPDSF_1933 - O-succinylbenzoic acid--CoA ligase 1891 57.00 +1 2183528..2184499 - 323 145599214 - YPDSF_1934 - O-succinylbenzoate synthase 1892 51.98 0 2184499..2185356 - 285 145599215 - YPDSF_1935 - naphthoate synthase 1893 54.46 +1 2185370..2186188 - 272 145599216 - YPDSF_1936 - acyl-CoA thioester hydrolase YfbB 1894 56.87 +1 2186185..2187888 - 567 145599217 - YPDSF_1937 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1895 51.31 0 2188116..2189489 - 457 145599218 - YPDSF_1938 - menaquinone-specific isochorismate synthase 1896 45.74 0 2190011..2190655 - 214 145599219 - YPDSF_1939 - hypothetical protein 1897 47.90 0 2191210..2191518 - 102 145599220 - YPDSF_1940 - hypothetical protein 1898 35.12 -2 2191702..2191869 + 55 145599221 - YPDSF_1941 - hypothetical protein 1899 33.33 -2 2192043..2192225 + 60 145599222 - YPDSF_1942 - hypothetical protein 1900 53.24 +1 2192444..2194312 - 622 145599223 - YPDSF_1943 - phosphogluconate dehydratase 1901 51.94 0 2194322..2194837 - 171 145599224 - YPDSF_1944 - hypothetical protein 1902 49.96 0 2194867..2196183 - 438 145599225 - YPDSF_1945 - sugar transporter 1903 48.05 0 2196729..2197679 - 316 145599226 - YPDSF_1946 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1904 47.03 0 2198145..2199137 - 330 145599227 - YPDSF_1947 - LacI family transcriptional regulator 1905 51.25 0 2199606..2200889 + 427 145599228 - YPDSF_1948 - putative lipoprotein 1906 44.14 0 2201543..2202412 + 289 145599229 - YPDSF_1949 - gluconate 5-dehydrogenase 1907 50.84 0 2202461..2202997 + 178 145599230 - YPDSF_1950 - thermosensitive gluconokinase 1908 49.36 0 2203075..2203542 + 155 145599231 - YPDSF_1951 - hypothetical protein 1909 35.68 -2 2203873..2205063 - 396 145599232 - YPDSF_1952 - hypothetical protein 1910 53.83 +1 2205299..2206762 - 487 145599233 - YPDSF_1953 - NADH dehydrogenase subunit N 1911 51.40 0 2206769..2208301 - 510 145599234 - YPDSF_1954 - NADH dehydrogenase subunit M 1912 54.20 +1 2208341..2210185 - 614 145599235 - YPDSF_1955 - NADH dehydrogenase subunit L 1913 55.12 +1 2210182..2210484 - 100 145599236 - YPDSF_1956 - NADH dehydrogenase subunit K 1914 51.65 0 2210481..2211026 - 181 145599237 - YPDSF_1957 - NADH dehydrogenase subunit J 1915 51.75 0 2211039..2211581 - 180 145599238 - YPDSF_1958 - NADH dehydrogenase subunit I 1916 51.64 0 2211596..2212573 - 325 145599239 - YPDSF_1959 - NADH dehydrogenase subunit H 1917 54.21 +1 2212570..2215314 - 914 145599240 - YPDSF_1960 - NADH dehydrogenase subunit G 1918 53.90 +1 2215401..2216786 - 461 145599241 - YPDSF_1961 - NADH dehydrogenase I subunit F 1919 54.08 +1 2216783..2217346 - 187 145599242 - YPDSF_1962 - NADH dehydrogenase subunit E 1920 51.47 0 2217349..2219145 - 598 145599243 - YPDSF_1963 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1921 50.29 0 2219286..2219963 - 225 145599244 - YPDSF_1964 - NADH dehydrogenase subunit B 1922 49.90 0 2220065..2220565 - 166 145599245 - YPDSF_1965 - NADH dehydrogenase subunit A 1923 46.84 0 2221244..2222176 - 310 145599246 - YPDSF_1966 - LysR family transcriptional regulator 1924 49.05 0 2223031..2224245 + 404 145599247 - YPDSF_1967 - aminotransferase AlaT 1925 43.94 0 2224396..2224989 + 197 145599248 - YPDSF_1968 - hypothetical protein 1926 50.24 0 2225332..2227224 - 630 145599249 - YPDSF_1969 - ion transport protein 1927 52.21 0 2227456..2228112 - 218 145599250 - YPDSF_1970 - putative phosphatase 1928 46.46 0 2228277..2228771 - 164 145599251 - YPDSF_1971 - hypothetical protein 1929 52.19 0 2229069..2229524 - 151 145599252 - YPDSF_1972 - hypothetical protein 1930 50.46 0 2229946..2231148 + 400 145599253 - YPDSF_1973 - acetate kinase 1931 52.69 0 2231316..2233469 + 717 145599254 - YPDSF_1974 - phosphate acetyltransferase 1932 48.02 0 2233735..2234769 - 344 145599255 - YPDSF_1975 - LacI family transcriptional regulator 1933 47.75 0 2235083..2235526 + 147 145599256 - YPDSF_1976 - phosphotransferase enzyme II, A component 1934 43.06 -1 2235695..2235982 + 95 145599257 - YPDSF_1977 - hypothetical protein 1935 48.21 0 2235995..2237251 + 418 145599258 ulaA YPDSF_1978 - ascorbate-specific PTS system enzyme IIC 1936 51.73 0 2237368..2237916 - 182 145599259 - YPDSF_1979 - hypothetical protein 1937 39.68 -1 2238914..2239606 - 230 145599260 - YPDSF_1982 - hypothetical protein 1938 53.69 +1 2239960..2240868 + 302 145599261 - YPDSF_1983 - hypothetical protein 1939 46.12 0 2240992..2241789 - 265 145599262 - YPDSF_1984 - histidine/lysine/arginine/ornithine transporter subunit 1940 45.89 0 2241803..2242519 - 238 145599263 - YPDSF_1985 - histidine transport system permease protein HisM 1941 49.49 0 2242516..2243202 - 228 145599264 - YPDSF_1986 - histidine transport system permease protein HisQ 1942 44.06 0 2243305..2244087 - 260 145599265 - YPDSF_1987 - histidine-binding periplasmic protein 1943 46.77 0 2244612..2245184 - 190 145599266 - YPDSF_1988 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1944 47.43 0 2245431..2246948 - 505 145599267 - YPDSF_1989 - amidophosphoribosyltransferase 1945 44.71 0 2246961..2247470 - 169 145599268 - YPDSF_1990 - colicin V production protein 1946 51.31 0 2247782..2248504 - 240 145599269 - YPDSF_1991 - hypothetical protein 1947 53.10 +1 2248624..2249928 - 434 145599270 - YPDSF_1992 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1948 49.62 0 2250177..2251091 - 304 145599271 - YPDSF_1993 - acetyl-CoA carboxylase subunit beta 1949 45.85 0 2251322..2251984 - 220 145599272 - YPDSF_1994 - hypothetical protein 1950 50.91 0 2252141..2253022 - 293 145599273 truA YPDSF_1995 - tRNA pseudouridine synthase A 1951 53.31 +1 2253022..2254032 - 336 145599274 - YPDSF_1996 - putative semialdehyde dehydrogenase 1952 53.70 +1 2254202..2255389 - 395 145599275 - YPDSF_1997 - erythronate-4-phosphate dehydrogenase 1953 48.85 0 2255376..2256161 - 261 145599276 - YPDSF_1998 - AraC family transcription regulator 1954 49.46 0 2256387..2257304 + 305 145599277 - YPDSF_1999 - hypothetical protein 1955 50.29 0 2257589..2258626 + 345 145599278 - YPDSF_2000 - flagella biosynthesis regulator 1956 46.33 0 2258968..2259498 - 176 145599279 - YPDSF_2001 - mannose-resistant/Proteus-like fimbrial protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.