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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1031 46.94 0 1191559..1192521 - 320 145598354 - YPDSF_1059 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1032 48.75 0 1192788..1194104 - 438 145598355 - YPDSF_1060 - hypothetical protein 1033 44.83 0 1194125..1195081 - 318 145598356 znuA YPDSF_1061 - high-affinity zinc transporter periplasmic component 1034 49.08 0 1195154..1195915 + 253 145598357 znuC YPDSF_1062 - high-affinity zinc transporter ATPase 1035 51.65 0 1195912..1196697 + 261 145598358 znuB YPDSF_1063 - high-affinity zinc transporter membrane component 1036 50.35 0 1196752..1197756 - 334 145598359 ruvB YPDSF_1064 - Holliday junction DNA helicase B 1037 50.07 0 1197918..1198598 - 226 145598360 ruvA YPDSF_1065 - Holliday junction DNA helicase motor protein 1038 50.77 0 1198815..1199336 - 173 145598361 ruvC YPDSF_1066 - Holliday junction resolvase 1039 49.06 0 1199545..1200288 - 247 145598362 - YPDSF_1067 - hypothetical protein 1040 52.03 0 1200346..1200789 - 147 145598363 ntpA YPDSF_1068 - dATP pyrophosphohydrolase 1041 51.03 0 1200789..1202585 - 598 145598364 aspS YPDSF_1069 - aspartyl-tRNA synthetase 1042 51.23 0 1203519..1204334 + 271 145598365 - YPDSF_1070 - hypothetical protein 1043 43.94 0 1204514..1204909 + 131 145598366 - YPDSF_1071 - hypothetical protein 1044 49.00 0 1205100..1205903 + 267 145598367 - YPDSF_1072 - hypothetical protein 1045 52.57 0 1205900..1206871 + 323 145598368 - YPDSF_1073 - hypothetical protein 1046 49.15 0 1207064..1207828 - 254 145598369 - YPDSF_1074 - copper homeostasis protein CutC 1047 47.22 0 1208060..1208635 - 191 145598370 - YPDSF_1075 - hypothetical protein 1048 43.45 0 1208665..1208832 + 55 145598371 - YPDSF_1076 - hypothetical protein 1049 49.91 0 1209234..1210964 + 576 145598372 argS YPDSF_1077 - arginyl-tRNA synthetase 1050 41.47 -1 1211195..1215805 - 1536 145598373 - YPDSF_1078 - hemolysin 1051 36.76 -2 1215955..1217616 - 553 145598374 - YPDSF_1079 - hemolysin activator protein 1052 50.98 0 1218072..1219607 - 511 145598375 - YPDSF_1080 - membrane protein 1053 49.72 0 1219874..1221484 - 536 145598376 - YPDSF_1081 - oxidoreductase 1054 48.38 0 1221492..1222076 - 194 145598377 - YPDSF_1082 - ribosomal-protein-S5-alanine N-acetyltransferase 1055 52.49 0 1222370..1223575 + 401 145598378 - YPDSF_1083 - multidrug resistance protein MdtH 1056 45.21 0 1223970..1224533 + 187 145598379 - YPDSF_1084 - hypothetical protein 1057 50.62 0 1224987..1225547 - 186 145598380 - YPDSF_1085 - hypothetical protein 1058 50.27 0 1225584..1226321 - 245 145598381 - YPDSF_1086 - putative hydrolase 1059 55.35 +1 1226956..1228068 - 370 145598382 - YPDSF_1087 - transcriptional regulatory protein 1060 52.71 0 1228082..1228912 - 276 145598383 - YPDSF_1088 - hypothetical protein 1061 51.46 0 1229112..1229453 + 113 145598384 - YPDSF_1089 - ABC transporter, ATP-binding subunit 1062 45.75 0 1229541..1229999 - 152 145598385 - YPDSF_1090 - transposase for the IS1541 insertion element 1063 53.64 +1 1229999..1230904 + 301 145598386 - YPDSF_1091 - hypothetical protein 1064 53.75 +1 1230901..1231767 + 288 145598387 - YPDSF_1092 - binding-protein-dependent transport system membrane protein 1065 52.33 0 1231764..1232600 + 278 145598388 - YPDSF_1093 - binding-protein-dependent transport system membrane protein 1066 51.06 0 1232620..1233702 + 360 145598389 - YPDSF_1094 - hypothetical protein 1067 43.04 -1 1234003..1234878 + 291 145598390 - YPDSF_1095 - hypothetical protein 1068 52.00 0 1235945..1237642 + 565 145598391 - YPDSF_1096 - putative sulfate transporter YchM 1069 50.18 0 1238119..1238973 - 284 145598392 - YPDSF_1097 - 2-dehydro-3-deoxyphosphooctonate aldolase 1070 48.27 0 1239069..1239878 - 269 145598393 - YPDSF_1098 - putative transcriptional regulator 1071 43.28 0 1239875..1240276 - 133 145598394 - YPDSF_1099 - hypothetical protein 1072 53.55 +1 1240340..1241170 - 276 145598395 - YPDSF_1100 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1073 51.43 0 1241170..1242252 - 360 145598396 prfA YPDSF_1101 - peptide chain release factor 1 1074 50.19 0 1242285..1243601 - 438 145598397 hemA YPDSF_1102 - glutamyl-tRNA reductase 1075 47.76 0 1243853..1244476 + 207 145598398 lolB YPDSF_1103 - outer membrane lipoprotein LolB 1076 49.22 0 1244478..1245377 + 299 145598399 - YPDSF_1104 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1077 49.70 0 1244624..1245448 - 274 145598400 - YPDSF_1105 - hypothetical protein 1078 50.00 0 1245718..1246665 + 315 145598401 - YPDSF_1106 - ribose-phosphate pyrophosphokinase 1079 46.52 0 1246867..1247139 - 90 145598402 - YPDSF_1107 - hypothetical protein 1080 47.18 0 1247471..1248091 + 206 145598403 - YPDSF_1108 - peptidyl-tRNA hydrolase 1081 49.54 0 1248255..1249346 + 363 145598404 - YPDSF_1109 - translation-associated GTPase 1082 45.86 0 1249559..1249957 + 132 145598405 - YPDSF_1110 - hypothetical protein 1083 50.78 0 1249975..1250484 + 169 145598406 - YPDSF_1111 - integrase core subunit 1084 41.35 -1 1250532..1250930 - 132 145598407 - YPDSF_1112 - rhodanese-like protein 1085 52.11 0 1250938..1251768 - 276 145598408 - YPDSF_1113 - putative esterase 1086 54.03 +1 1251765..1252421 - 218 145598409 - YPDSF_1114 - hypothetical protein 1087 46.03 0 1253052..1253894 + 280 145598410 - YPDSF_1115 - hypothetical protein 1088 41.67 -1 1254102..1254797 - 231 145598411 - YPDSF_1116 - hypothetical protein 1089 44.89 0 1254812..1255477 - 221 145598412 - YPDSF_1117 - flavodoxin 1090 47.34 0 1255668..1256759 - 363 145598413 - YPDSF_1118 - hypothetical protein 1091 51.23 0 1257024..1257347 + 107 145598414 - YPDSF_1119 - response regulator receiver 1092 52.79 0 1257374..1258396 + 340 145598415 - YPDSF_1120 - transposase 1093 50.38 0 1258396..1259175 + 259 145598416 - YPDSF_1121 - transposase/IS protein 1094 51.73 0 1259214..1259675 + 153 145598417 - YPDSF_1122 - transcriptional activator 1095 51.80 0 1259687..1261072 + 461 145598418 - YPDSF_1123 - two-component system sensor protein 1096 50.83 0 1261349..1261771 + 140 145598419 - YPDSF_1124 - decarboxylase 1097 53.93 +1 1261826..1262296 + 156 145598420 - YPDSF_1125 - hypothetical protein 1098 48.51 0 1262509..1263582 + 357 145598421 - YPDSF_1126 - hypothetical protein 1099 40.29 -1 1264373..1265278 + 301 145598422 - YPDSF_1127 - hypothetical protein 1100 40.62 -1 1265284..1266216 + 310 145598423 - YPDSF_1128 - hypothetical protein 1101 37.12 -2 1266203..1267153 + 316 145598424 - YPDSF_1129 - hypothetical protein 1102 40.38 -1 1267494..1268174 + 226 145598425 - YPDSF_1130 - dehydrogenase 1103 44.39 0 1268279..1268938 + 219 145598426 - YPDSF_1131 - hypothetical protein 1104 45.70 0 1269073..1269711 - 212 145598427 - YPDSF_1132 - hypothetical protein 1105 49.29 0 1269958..1272069 - 703 145598428 - YPDSF_1133 - hypothetical protein 1106 38.23 -2 1272647..1274809 + 720 145598429 - YPDSF_1134 - hypothetical protein 1107 49.55 0 1274855..1276063 - 402 145598430 - YPDSF_1135 - transposase for the IS285 insertion element 1108 38.86 -1 1276196..1277914 + 572 145598431 - YPDSF_1136 - hypothetical protein 1109 39.57 -1 1278084..1278548 + 154 145598432 - YPDSF_1137 - hypothetical protein 1110 50.59 0 1278709..1279896 - 395 145598433 - YPDSF_1138 - glycosyl transferase 1111 46.84 0 1279893..1280477 - 194 145598434 - YPDSF_1139 - hypothetical protein 1112 48.14 0 1280474..1281628 - 384 145598435 - YPDSF_1140 - glycosyl transferase 1113 49.78 0 1281628..1282539 - 303 145598436 - YPDSF_1141 - dehydrogenase 1114 52.06 0 1282724..1284010 - 428 145598437 - YPDSF_1142 - coenzyme synthetase 1115 53.53 +1 1284007..1284813 - 268 145598438 - YPDSF_1143 - hypothetical protein 1116 53.88 +1 1284806..1285822 - 338 145598439 - YPDSF_1144 - dehydrogenase 1117 52.17 0 1285836..1286366 - 176 145598440 - YPDSF_1145 - 3-oxoacyl-(acyl-carrier-protein) synthase III 1118 49.80 0 1286335..1286844 - 169 145598441 - YPDSF_1146 - hypothetical protein 1119 46.42 0 1287877..1289481 + 534 145598442 - YPDSF_1147 - hypothetical protein 1120 51.83 0 1289659..1290231 - 190 145598443 - YPDSF_1148 - hypothetical protein 1121 49.53 0 1290231..1291601 - 456 145598444 - YPDSF_1149 - N-formimino-L-glutamate deiminase 1122 50.91 0 1291749..1292516 + 255 145598445 - YPDSF_1150 - GntR family transcriptional regulatory protein 1123 50.29 0 1292720..1293940 + 406 145598446 - YPDSF_1151 - imidazolonepropionase 1124 52.79 0 1294031..1295053 + 340 145598447 - YPDSF_1152 - transposase 1125 50.38 0 1295053..1295832 + 259 145598448 - YPDSF_1153 - transposase/IS protein 1126 48.89 0 1295848..1296702 + 284 145598449 - YPDSF_1154 - N-formylglutamate amidohydrolase 1127 49.55 0 1296763..1297971 - 402 145598450 - YPDSF_1155 - transposase for the IS285 insertion element 1128 44.51 0 1298434..1299516 - 360 145598451 - YPDSF_1156 - hypothetical protein 1129 48.04 0 1300252..1301244 - 330 145598452 - YPDSF_1157 - succinylglutamate desuccinylase 1130 50.45 0 1301305..1302648 - 447 145598453 - YPDSF_1158 - succinylarginine dihydrolase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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