IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3941	 58.82	-1	4697554..4698012	+	152	58584036	-	XOO4413	-	hypothetical protein
3942	 65.68	0	4698283..4699089	-	268	58584037	-	XOO4414	-	hypothetical protein
3943	 62.80	0	4699695..4700600	-	301	58584038	rdgC	XOO4415	-	recombination associated protein
3944	 66.78	0	4700664..4701581	-	305	58584039	-	XOO4416	-	hypothetical protein
3945	 62.03	0	4702185..4703522	+	445	122879351	xylA	XOO4417	-	xylose isomerase
3946	 64.73	0	4703748..4704830	-	360	122879352	salR	XOO4418	-	sal operon transcriptional repressor
3947	 63.60	0	4704970..4707186	+	738	58584042	aguA	XOO4419	-	alpha-glucuronidase
3948	 66.33	0	4707048..4709147	+	699	58584043	-	XOO4420	-	sialic acid-specific 9-O-acetylesterase
3949	 63.92	0	4709072..4710418	+	448	58584044	rspA	XOO4421	-	starvation sensing protein
3950	 64.79	0	4710418..4712118	+	566	122879353	xylB	XOO4422	-	xylosidase; arabinosidase
3951	 66.63	0	4712121..4714835	+	904	58584046	-	XOO4423	-	glucan 1,4-beta-glucosidase
3952	 64.97	0	4715058..4716530	+	490	58584047	mtlD	XOO4424	-	mannitol dehydrogenase
3953	 62.14	0	4716756..4717064	-	102	58584048	-	XOO4425	-	bleomycin resistance protein
3954	 59.09	-1	4717508..4718563	-	351	58584049	-	XOO4426	-	hypothetical protein
3955	 63.99	0	4718791..4720209	-	472	161898957	hrmI	XOO4427	-	glucuronate isomerase
3956	 61.35	0	4720250..4721227	-	325	58584051	-	XOO4428	-	secreted xylanase
3957	 63.15	0	4721645..4722526	-	293	122879354	-	XOO4429	-	putative xylanase
3958	 64.29	0	4722645..4723904	-	419	58584053	exuT	XOO4430	-	hexuranate transporter
3959	 63.33	0	4724372..4727341	+	989	58584054	cirA	XOO4431	-	TonB-dependent receptor
3960	 61.64	0	4727338..4728927	+	529	58584055	xylP	XOO4432	-	transport protein
3961	 63.67	0	4728959..4729993	+	344	58584056	xsa	XOO4433	-	xylosidase; arabinosidase
3962	 56.37	-2	4730359..4730766	+	135	58584057	-	XOO4434	-	putative transposase
3963	 63.22	0	4731671..4731931	+	86	58584061	blc	XOO4438	-	outer membrane lipoprotein Blc
3964	 64.41	0	4732086..4732262	-	58	58584062	-	XOO4439	-	hypothetical protein
3965	 63.64	0	4732465..4733025	+	186	58584063	-	XOO4440	-	transposase
3966	 62.44	0	4733022..4733471	+	149	58584064	-	XOO4441	-	transposase
3967	 65.13	0	4733716..4734105	+	129	58584065	-	XOO4442	-	hypothetical protein
3968	 54.59	-2	4734186..4734632	+	148	58584066	-	XOO4443	-	transposase
3969	 65.86	0	4735104..4736093	+	329	58584068	-	XOO4445	-	hypothetical protein
3970	 63.28	0	4736159..4737280	-	373	58584069	-	XOO4446	-	hypothetical protein
3971	 68.58	+1	4737290..4738384	-	364	58584070	-	XOO4447	-	oxidoreductase
3972	 66.23	0	4738459..4739139	+	226	58584071	-	XOO4448	-	TetR family transcriptional regulator
3973	 59.12	-1	4739172..4739648	-	158	58584072	-	XOO4449	-	putative transposase
3974	 58.06	-1	4739614..4739985	-	123	58584073	-	XOO4450	-	putative transposase
3975	 62.11	0	4740036..4741418	+	460	58584074	-	XOO4451	-	putative ISXo8 transposase
3976	 63.05	0	4741509..4742477	+	322	58584075	-	XOO4452	-	hypothetical protein
3977	 64.12	0	4742580..4742933	-	117	58584076	-	XOO4453	-	hypothetical protein
3978	 63.37	0	4742924..4743529	-	201	58584077	-	XOO4454	-	hypothetical protein
3979	 63.40	0	4743944..4744402	+	152	58584078	-	XOO4455	-	MarR family transcriptional regulator
3980	 64.23	0	4744399..4744932	+	177	58584079	ohr	XOO4456	-	organic hydroperoxide resistance protein
3981	 66.67	0	4745181..4746044	-	287	58584080	-	XOO4457	-	hypothetical protein
3982	 62.71	0	4746283..4747218	+	311	122879355	-	XOO4458	-	putative transposase
3983	 63.37	0	4747674..4748915	-	413	58584082	-	XOO4459	-	ISxac1 transposase
3984	 59.78	-1	4749220..4749582	-	120	58584083	-	XOO4460	-	hypothetical protein
3985	 58.63	-1	4749648..4749896	+	82	58584084	-	XOO4461	-	DNA-binding protein
3986	 67.87	+1	4751654..4751986	-	110	121632138	-	XOO4946	-	hypothetical protein
3987	 66.46	0	4751979..4752455	-	158	58584085	-	XOO4462	-	hypothetical protein
3988	 65.52	0	4752458..4752892	-	144	58584086	-	XOO4463	-	hypothetical protein
3989	 60.36	0	4753590..4753922	+	110	58584087	-	XOO4464	-	hypothetical protein
3990	 51.52	-2	4754171..4754269	+	32	58584088	-	XOO4465	-	hypothetical protein
3991	 67.81	+1	4754372..4755766	-	464	122879356	-	XOO4466	-	hypothetical protein
3992	 66.32	0	4756704..4756994	-	96	58584090	vapI	XOO4467	-	virulence associated protein
3993	 60.28	-1	4757012..4757293	-	93	58584091	-	XOO4468	-	hypothetical protein
3994	 71.99	+2	4757388..4759697	-	769	58584092	recD	XOO4469	-	exodeoxyribonuclease V alpha chain
3995	 68.71	+1	4759834..4763934	-	1366	58584093	recB	XOO4470	-	exodeoxyribonuclease V beta chain
3996	 68.69	+1	4763904..4767410	-	1168	58584094	recC	XOO4471	-	exodeoxyribonuclease V gamma chain
3997	 59.10	-1	4767721..4770375	+	884	58584095	-	XOO4472	-	hypothetical protein
3998	 69.70	+1	4771430..4774426	-	998	58584098	-	XOO4475	-	hemagglutinin
3999	 54.17	-2	4774434..4774553	+	39	121632139	-	YXOOp17	-	hypothetical protein
4000	 65.02	0	4775117..4775662	+	181	58584100	-	XOO4477	-	microcystin dependent protein
4001	 67.23	0	4775731..4776258	+	175	122879357	-	XOO4476	-	microcystin dependent protein
4002	 65.36	0	4776317..4776853	+	178	58584101	-	XOO4478	-	microcystin dependent protein
4003	 62.77	0	4776881..4777906	+	341	58584102	-	XOO4479	-	transposase
4004	 60.51	0	4777919..4778194	+	91	58584103	-	XOO4480	-	putative transposase
4005	 65.32	0	4778189..4778929	-	246	58584104	sodC2	XOO4481	-	superoxide dismutase
4006	 70.30	+1	4778892..4779497	-	201	58584105	yojM	XOO4482	-	superoxide dismutase like protein
4007	 66.60	0	4779993..4781441	-	482	58584106	ntrC	XOO4483	-	two-component system regulatory protein
4008	 68.28	+1	4781413..4782468	-	351	58584107	ntrB	XOO4484	-	two-component system sensor protein
4009	 66.33	0	4782740..4784215	-	491	58584109	amtB	XOO4486	-	ammonium transporter
4010	 64.60	0	4784205..4784543	-	112	58584110	glnB	XOO4487	-	nitrogen regulatory protein P-II
4011	 61.56	0	4784821..4786230	-	469	58584111	glnA	XOO4488	-	glutamine synthetase
4012	 64.66	0	4786452..4787249	+	265	122879358	uppP	XOO4489	-	undecaprenyl pyrophosphate phosphatase
4013	 70.14	+1	4787386..4788192	+	268	58584113	-	XOO4490	-	hypothetical protein
4014	 65.20	0	4789346..4790095	-	249	58584116	-	XOO4493	-	hypothetical protein
4015	 70.09	+1	4790152..4792224	-	690	58584117	-	XOO4494	-	hypothetical protein
4016	 66.77	0	4792638..4793627	-	329	58584118	-	XOO4495	-	hypothetical protein
4017	 65.89	0	4793687..4794592	-	301	58584119	-	XOO4496	-	acetyltransferase
4018	 65.27	0	4794610..4795038	-	142	122879359	-	XOO4497	-	hypothetical protein
4019	 64.58	0	4795316..4797331	-	671	58584121	cls	XOO4498	-	cardiolipin synthase
4020	 60.38	0	4797328..4797900	-	190	58584122	-	XOO4499	-	hypothetical protein
4021	 70.13	+1	4797904..4798365	-	153	58584123	-	XOO4500	-	hypothetical protein
4022	 65.04	0	4798396..4799196	-	266	58584124	parA	XOO4501	-	partition protein
4023	 63.51	0	4799381..4800298	-	305	58584125	-	XOO4502	-	hypothetical protein
4024	 69.52	+1	4800560..4800769	-	69