version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3548 66.43 0 4250170..4250598 - 142 58583599 - XOO3976 - hypothetical protein 3549 59.70 -1 4250582..4250782 - 66 58583600 - XOO3977 - hypothetical protein 3550 62.77 0 4250869..4251279 - 136 58583601 - XOO3978 - IS1478 transposase 3551 63.60 0 4251252..4251707 - 151 58583602 codA XOO3979 - cytosine deaminase 3552 65.49 0 4251704..4252297 - 197 58583603 - XOO3980 - hypothetical protein 3553 63.11 0 4252574..4253305 - 243 58583605 tISRso5 XOO3982 - ISRSO5-transposase protein 3554 66.39 0 4253455..4254531 - 358 122879307 - XOO3983 - multidrug resistance efflux pump 3555 61.42 0 4256237..4257037 + 266 58583610 ubiE XOO3987 - ubiquinone/menaquinone biosynthesis methyltransferase 3556 64.39 0 4257135..4258100 + 321 58583611 - XOO3988 - response regulator 3557 63.63 0 4258162..4260234 + 690 58583612 pepN XOO3989 - aminopeptidase 3558 63.99 0 4260304..4261125 + 273 58583613 - XOO3990 - hypothetical protein 3559 65.54 0 4261425..4262048 + 207 58583614 - XOO3991 - hypothetical protein 3560 60.67 0 4262222..4263589 - 455 58583615 hslU XOO3992 - ATP-dependent protease ATP-binding subunit 3561 63.04 0 4263700..4264251 - 183 122879308 hslV XOO3993 - ATP-dependent protease peptidase subunit 3562 63.12 0 4264767..4265810 - 347 58583617 xerC XOO3994 - site-specific tyrosine recombinase XerC 3563 64.46 0 4265884..4266564 - 226 58583619 - XOO3996 - hypothetical protein 3564 67.13 0 4266552..4267406 - 284 161898962 dapF XOO3997 - diaminopimelate epimerase 3565 66.67 0 4267690..4268124 - 144 58583621 - XOO3998 - hypothetical protein 3566 61.06 0 4268464..4270674 - 736 58583622 ptrB XOO3999 - protease II; oligopeptidase B 3567 63.47 0 4270687..4271907 + 406 58583623 aspC XOO4000 - hypothetical protein 3568 53.46 -2 4271996..4272154 - 52 58583624 - XOO4001 - hypothetical protein 3569 63.03 0 4272747..4274918 - 723 58583625 - XOO4002 - prolyl oligopeptidase 3570 70.50 +1 4274908..4275246 - 112 58583626 - XOO4003 - hypothetical protein 3571 62.98 0 4275607..4276176 + 189 122879309 - XOO4004 - outer membrane lipoprotein 3572 63.25 0 4276285..4277250 - 321 58583628 - XOO4005 - hypothetical protein 3573 63.92 0 4277809..4278609 + 266 58583629 - XOO4006 - hypothetical protein 3574 68.63 +1 4279160..4280074 - 304 58583630 hemC XOO4007 - porphobilinogen deaminase 3575 66.94 0 4280105..4280842 - 245 58583631 algR XOO4008 - two-component system regulatory protein 3576 69.61 +1 4280873..4281925 - 350 58583632 algZ XOO4009 - two-component system sensor protein 3577 68.31 +1 4281930..4282598 - 222 58583633 - XOO4010 - carboxylesterase 3578 66.41 0 4282750..4284687 - 645 122879310 hrpM XOO4011 - glucosyltransferase MdoH 3579 54.59 -2 4285387..4285833 + 148 58583635 - XOO4012 - transposase 3580 65.09 0 4286491..4288140 - 549 58583638 - XOO4015 - aminopeptidase 3581 64.97 0 4289531..4291060 - 509 58583641 ybaR XOO4018 - sulfate permease 3582 61.15 0 4291226..4292674 + 482 122879311 engXCA XOO4019 - cellulase 3583 65.79 0 4293156..4293383 + 75 58583643 tsr XOO4020 - chemotaxis protein 3584 65.85 0 4293909..4296722 - 937 58583644 - XOO4021 - histidine kinase-response regulator hybrid protein 3585 65.76 0 4296788..4299658 + 956 58583645 - XOO4022 - zinc protease 3586 65.27 0 4300062..4301135 + 357 58583646 phS XOO4023 - histidine kinase-response regulator hybrid protein 3587 66.49 0 4301174..4302310 - 378 58583647 - XOO4024 - hypothetical protein 3588 54.81 -2 4302765..4303211 - 148 58583649 - XOO4026 - transposase 3589 56.91 -1 4303858..4303980 - 40 58583650 - XOO4027 - endonuclease 3590 69.13 +1 4304166..4305017 + 283 58583652 - XOO4029 - hypothetical protein 3591 66.25 0 4305271..4306944 + 557 122879312 treA XOO4030 - trehalase 3592 68.07 +1 4308656..4308940 + 94 58583654 - XOO4031 - hypothetical protein 3593 63.05 0 4309144..4310055 - 303 58583655 corA XOO4032 - magnesium and cobalt transport protein 3594 60.67 0 4310430..4311296 + 288 122879313 - XOO4033 - hypothetical protein 3595 60.57 0 4311390..4312766 - 458 122879314 cycA XOO4034 - D-alanine/D-serine/glycine permease 3596 61.38 0 4313933..4315633 + 566 122879315 - XOO4035 - 1,4-beta-cellobiosidase 3597 62.89 0 4316042..4317814 + 590 58583659 - XOO4036 - cellulase 3598 61.94 0 4318090..4319019 - 309 58583660 - XOO4037 - hypothetical protein 3599 65.80 0 4319001..4320041 + 346 58583661 - XOO4038 - hypothetical protein 3600 66.17 0 4320133..4320735 + 200 121632131 - XOO4922 - hypothetical protein 3601 58.48 -1 4321364..4321705 + 113 58583663 - XOO4040 - ISRSO5-transposase protein 3602 67.77 +1 4322081..4323172 + 363 58583665 - XOO4042 - hypothetical protein 3603 62.79 0 4323955..4324341 - 128 121632132 - YXOOp14 - hypothetical protein 3604 63.31 0 4324299..4324655 - 118 121632133 - YXOOp15 - hypothetical protein 3605 64.42 0 4325087..4327399 + 770 122879316 - XOO4043 - dipeptidyl peptidase IV 3606 63.12 0 4327595..4329541 - 648 58583667 - XOO4044 - prolyl oligopeptidase family protein 3607 63.11 0 4329799..4330107 + 102 58583668 - XOO4045 - hypothetical protein 3608 64.14 0 4330498..4332081 + 527 58583669 - XOO4046 - oxidoreductase 3609 63.65 0 4333283..4334209 - 308 58583670 - XOO4047 - IS1404 transposase 3610 57.95 -1 4334062..4334325 - 87 121632134 - XOO4927 - IS1404 transposase 3611 64.69 0 4334374..4335282 - 302 58583671 - XOO4048 - threonine aldolase 3612 64.50 0 4335257..4336777 - 506 58583672 trpE XOO4049 - anthranilate synthase component I 3613 69.57 +1 4337393..4338322 - 309 58583673 - XOO4050 - lipid kinase 3614 67.48 +1 4338557..4339048 - 163 58583674 - XOO4051 - N-acetyltransferase 3615 63.69 0 4339045..4339716 - 223 122879317 rpe XOO4052 - ribulose-phosphate 3-epimerase 3616 67.54 +1 4340111..4340566 - 151 58583676 - XOO4053 - hypothetical protein 3617 63.45 0 4340643..4341575 + 310 58583677 purC XOO4054 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3618 58.91 -1 4342364..4342840 - 158 58583678 - XOO4055 - putative transposase 3619 58.33 -1 4342806..4343177 - 123 58583679 - XOO4056 - putative transposase 3620 65.51 0 4343310..4344347 - 345 58583680 - XOO4057 - putative transposase 3621 55.29 -2 4344440..4344694 + 84 58583681 - XOO4058 - hypothetical protein 3622 62.85 0 4344697..4345089 + 130 58583682 - XOO4059 - lytic enzyme 3623 60.48 0 4346015..4346839 + 274 58583683 - XOO4060 - metalloproteinase 3624 69.33 +1 4346846..4347070 + 74 58583684 - XOO4061 - metalloproteinase 3625 61.40 0 4347185..4347697 + 170 58583685 - XOO4062 - hypothetical protein 3626 70.06 +1 4347723..4348076 - 117 58583686 - XOO4063 - hypothetical protein 3627 63.34 0 4348236..4351064 + 942 58583687 ndhF XOO4064 - putative monovalent cation/H+ antiporter subunit A 3628 61.38 0 4351061..4351438 + 125 58583688 phaC XOO4065 - putative monovalent cation/H+ antiporter subunit C 3629 65.70 0 4351435..4352979 + 514 58583689 phaD XOO4066 - putative monovalent cation/H+ antiporter subunit D 3630 61.93 0 4352976..4353482 + 168 58583690 phaE XOO4067 - putative monovalent cation/H+ antiporter subunit E 3631 60.70 0 4353479..4353763 + 94 58583691 phaF XOO4068 - putative monovalent cation/H+ antiporter subunit F 3632 58.19 -1 4353760..4354113 + 117 58583692 - XOO4069 - putative monovalent cation/H+ antiporter subunit G 3633 64.78 0 4355323..4356648 - 441 58583693 hmgA XOO4070 - homogentisate 1,2-dioxygenase 3634 61.47 0 4357013..4358224 - 403 58583694 - XOO4071 - 4-hydroxyphenylpyruvate dioxygenase 3635 65.64 0 4358254..4358742 + 162 58583695 - XOO4072 - MarR family transcriptional regulator 3636 64.36 0 4359099..4359704 - 201 58583696 - XOO4073 - hypothetical protein 3637 58.98 -1 4359701..4361209 - 502 58583697 yhiP XOO4074 - di-tripeptide transporter 3638 63.87 0 4361653..4362546 - 297 122879318 - XOO4075 - tryptophan 2,3-dioxygenase 3639 69.82 +1 4362952..4363839 + 295 122879319 nucH XOO4076 - nuclease 3640 67.41 +1 4363909..4364577 + 222 58583700 pdhA XOO4077 - pyruvate dehydrogenase E1 alpha subunit 3641 67.38 +1 4364570..4365127 + 185 58583701 pdhB XOO4078 - pyruvate dehydrogenase E1 beta subunit 3642 62.17 0 4365159..4366070 + 303 58583702 - XOO4079 - transposase 3643 65.93 0 4366040..4366174 + 44 58583703 - XOO4080 - transposase 3644 65.69 0 4366196..4366705 + 169 58583704 pdhB XOO4081 - pyruvate dehydrogenase E1 beta subunit 3645 69.29 +1 4366707..4367087 + 126 58583705 - XOO4082 - hypothetical protein 3646 65.72 0 4367290..4368348 - 352 58583706 - XOO4083 - hypothetical protein 3647 66.28 0 4368264..4369559 + 431 58583707 yfcY XOO4084 - acetyl-CoA acetyltransferase 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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