IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1573	 68.26	+1	1816033..1816908	-	291	58581367	tonB	XOO1744	-	TonB protein
1574	 67.80	+1	1816905..1817876	-	323	58581368	gshB	XOO1745	-	glutathione synthetase
1575	 54.73	-2	1818105..1818506	+	133	122879129	pilG	XOO1746	-	pilus protein
1576	 59.23	-1	1818524..1818886	+	120	58581370	pilH	XOO1747	-	PilH
1577	 63.86	0	1818883..1819416	+	177	58581371	pilI	XOO1748	-	pilus biogenesis protein
1578	 64.70	0	1819456..1821492	+	678	58581372	pilJ	XOO1749	-	pilus biogenesis protein
1579	 66.31	0	1826572..1828560	+	662	58581374	pilL	XOO1751	-	PilL
1580	 67.95	+1	1828526..1829770	+	414	58581375	-	XOO1752	-	hypothetical protein
1581	 64.78	0	1829804..1830280	+	158	58581376	-	XOO1753	-	hypothetical protein
1582	 65.06	0	1830531..1831154	+	207	58581377	rimJ	XOO1754	-	ribosomal protein alanine acetyltransferase
1583	 61.12	0	1831166..1832428	-	420	58581378	-	XOO1755	-	ISRSO5-transposase protein
1584	 67.82	+1	1833477..1833737	-	86	58581379	-	XOO1756	-	hypothetical protein
1585	 64.10	0	1833983..1835035	-	350	122879130	-	XOO1757	-	hypothetical protein
1586	 62.50	0	1835492..1835659	+	55	121632084	-	XOO4782	-	putative transposase
1587	 64.51	0	1836871..1837935	+	354	122879131	aspG	XOO1760	-	asparaginase
1588	 65.44	0	1837932..1838663	+	243	58581384	cutC	XOO1761	-	copper homeostasis protein
1589	 58.88	-1	1838688..1840241	-	517	122879132	-	XOO1762	-	leucin rich protein
1590	 65.31	0	1840788..1841891	-	367	58581386	-	XOO1763	-	hypothetical protein
1591	 61.24	0	1842394..1842780	-	128	58581387	-	XOO1764	-	transposase
1592	 65.77	0	1843972..1844082	-	36	58581390	-	XOO1767	-	hypothetical protein
1593	 66.25	0	1844913..1847321	+	802	122879133	-	XOO1768	-	hypothetical protein
1594	 64.93	0	1847371..1849326	-	651	58581392	bga	XOO1769	-	beta-galactosidase
1595	 65.33	0	1849492..1851894	-	800	58581393	-	XOO1770	-	hypothetical protein
1596	 66.73	0	1851970..1853433	-	487	58581394	-	XOO1771	-	hypothetical protein
1597	 64.19	0	1854236..1855651	+	471	58581395	-	XOO1772	-	membrane-fusion protein
1598	 61.20	0	1856295..1857263	-	322	58581396	-	XOO1773	-	putative transposase
1599	 52.01	-2	1857506..1858624	+	372	58581397	-	XOO1774	-	hypothetical protein
1600	 62.38	0	1860063..1861322	-	419	58581400	-	XOO1777	-	transposase
1601	 60.57	0	1861431..1863545	+	704	58581401	-	XOO1778	-	colicin V secretion ABC transporter ATP-binding protein
1602	 66.22	0	1863690..1866359	-	889	58581402	-	XOO1779	-	glucan 1,4-beta-glucosidase
1603	 64.95	0	1866566..1869247	-	893	58581403	-	XOO1780	-	beta-mannosidase
1604	 65.52	0	1869269..1871803	-	844	58581404	nahA	XOO1781	-	beta-hexosaminidase
1605	 59.55	-1	1872117..1873184	-	355	58581405	-	XOO1782	-	hypothetical protein
1606	 64.28	0	1873188..1874903	-	571	58581406	fucA1	XOO1783	-	alpha-L-fucosidase
1607	 61.17	0	1875083..1877794	-	903	58581407	iroN	XOO1784	-	TonB-dependent receptor
1608	 66.58	0	1878412..1879512	+	366	58581408	glk	XOO1785	-	glucokinase
1609	 68.91	+1	1879814..1880617	-	267	58581409	-	XOO1786	-	hypothetical protein
1610	 65.89	0	1880539..1881957	-	472	58581410	bioA	XOO1787	-	adenosylmethionine--8-amino-7-oxononanoate transaminase
1611	 64.80	0	1881906..1882547	+	213	58581412	nudE	XOO1789	-	ADP-ribose diphosphatase NudE
1612	 66.04	0	1882544..1883344	+	266	122879134	cysQ	XOO1788	-	sulfite synthesis pathway protein
1613	 64.61	0	1883587..1884606	+	339	58581413	mazG	XOO1790	-	nucleoside triphosphate pyrophosphohydrolase
1614	 64.71	0	1884603..1884857	+	84	58581414	-	XOO1791	-	hypothetical protein
1615	 66.67	0	1884845..1884940	+	31	121632085	-	XOO4784	-	hypothetical protein
1616	 62.94	0	1885238..1886203	+	321	58581415	-	XOO1792	-	hypothetical protein
1617	 66.32	0	1886207..1886785	+	192	58581416	-	XOO1793	-	hypothetical protein
1618	 63.96	0	1886813..1887922	+	369	58581417	gcvT	XOO1794	-	glycine cleavage system aminomethyltransferase T
1619	 63.38	0	1888059..1888454	+	131	58581418	gcvH	XOO1795	-	glycine cleavage system protein H
1620	 57.34	-1	1889147..1890229	+	360	58581419	-	XOO1796	-	hypothetical protein
1621	 65.99	0	1890823..1892289	-	488	58581420	bla	XOO1797	-	beta-lactamase
1622	 62.52	0	1892649..1893806	+	385	58581421	-	XOO1798	-	hypothetical protein
1623	 65.33	0	1894081..1894530	+	149	58581423	-	XOO1800	-	hypothetical protein
1624	 63.65	0	1897395..1898288	-	297	58581426	-	XOO1803	-	hypothetical protein
1625	 65.14	0	1898380..1899033	+	217	58581427	-	XOO1804	-	transcriptional regulator
1626	 58.49	-1	1899143..1902052	-	969	58581428	-	XOO1805	-	hypothetical protein
1627	 65.63	0	1902300..1903169	-	289	58581429	-	XOO1806	-	hypothetical protein
1628	 65.71	0	1903290..1904333	-	347	58581430	-	XOO1807	-	heat shock protein
1629	 64.23	0	1904255..1904992	+	245	121632086	mtgA	XOO4787	-	monofunctional biosynthetic peptidoglycan transglycosylase
1630	 63.41	0	1904935..1906041	+	368	58581432	gtrB	XOO1809	-	glucosyl transferase
1631	 58.59	-1	1906001..1906099	+	32	121632087	-	XOO4788	-	hypothetical protein
1632	 62.22	0	1906115..1906429	+	104	58581433	-	XOO1810	-	hypothetical protein
1633	 66.01	0	1907732..1907884	-	50	58581436	-	XOO1813	-	hypothetical protein
1634	 60.62	0	1907913..1908557	-	214	58581437	hly3	XOO1814	-	hemolysin III
1635	 63.93	0	1908633..1910237	-	534	58581438	prfC	XOO1815	-	peptide chain release factor 3
1636	 69.82	+1	1910370..1911257	-	295	122879135	-	XOO1816	-	hypothetical protein
1637	 65.88	0	1911471..1912619	+	382	58581440	metA	XOO1817	-	homoserine O-acetyltransferase
1638	 64.20	0	1912616..1913833	+	405	58581441	metB	XOO1818	-	cystathionine gamma-synthase
1639	 65.48	0	1914251..1914925	+	224	122879136	-	XOO1820	-	homoserine dehydrogenase
1640	 64.06	0	1915599..1916981	-	460	122879137	sdaA	XOO1821	-	L-serine dehydratase
1641	 67.47	+1	1917054..1917302	+	82	58581445	-	XOO1822	-	hypothetical protein
1642	 65.64	0	1917388..1917777	-	129	58581446	-	XOO1823	-	cold shock domain-containing protein
1643	 64.39	0	1918102..1918671	-	189	58581447	-	XOO1824	-	hypothetical protein
1644	 64.01	0	1918681..1919244	-	187	58581448	yodB	XOO1825	-	cytochrome B561
1645	 68.17	+1	1919241..1919903	-	220	58581449	-	XOO1826	-	hypothetical protein
1646	 64.02	0	1919943..1923575	+	1210	58581450	-	XOO1827	-	histidine kinase-response regulator hybrid protein
1647	 64.20	0	1923865..1927428	+	1187	122879138	-	XOO1828	-	histidine kinase/response regulator hybrid protein
1648	 57.96	-1	1927425..1930031	+	868	58581452	-	XOO1829	-	histidine kinase-response regulator hybrid protein
1649	 61.20	0	1930083..1931051	+	322	58581453	-	XOO1830	-	putative transposase
1650	 62.57	0	1931162..1932235	+	357	58581454	-	XOO1831	-	histidine kinase-response regulator hybrid protein
1651	 62.07	0	1932260..1932433	-	57	121632088	emrA	XOO4789	-	MFS transporter
1652	 55.24	-2	1932551..1932655	+	34	58581455	tnp	XOO1832	-	transposase
1653	 61.33	0	1932855..1933154	+	99	58581456	-	XOO1833	-	hypothetical protein
1654	 68.92	+1	1933339..1933560	-	73	58581457	-	XOO1834	-	ISxac3 transposase
1655	 66.56	0	1933766..1935697	+	643	58581458	-	XOO1835	-	hypothetical protein
1656	 63.66	0	1935819..1936217	+	132