version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 147 50.85 0 138151..138852 + 233 15640179 - VC0148 - cell division ATP-binding protein FtsE 148 48.74 0 138842..139834 + 330 15640180 - VC0149 - cell division protein FtsX 149 49.94 0 140004..140864 + 286 15640181 - VC0150 - RNA polymerase factor sigma-32 150 49.32 0 141066..142466 - 466 15640182 - VC0151 - soluble pyridine nucleotide transhydrogenase 151 51.87 +1 142774..143415 + 213 15640183 - VC0152 - DNA-binding transcriptional repressor FabR 152 48.12 0 143455..143826 + 123 15640184 - VC0153 - hypothetical protein 153 47.84 0 143863..144972 - 369 15640185 - VC0154 - tRNA (uracil-5-)-methyltransferase 154 43.25 0 145370..147205 + 611 15640186 - VC0156 - vitamin B12 receptor 155 46.64 0 147278..148885 - 535 15640187 - VC0157 - alkaline serine protease 156 47.62 0 149278..150075 + 265 15640188 - VC0158 - glutamate racemase 157 44.44 0 150041..150499 - 152 15640189 - VC0159 - RNA-binding protein 158 35.00 -2 150905..151024 + 39 15640190 - VC0160 - hypothetical protein 159 48.16 0 156407..157303 - 298 15640191 - VC0161 - DNA-binding transcriptional regulator IlvY 160 47.61 0 157441..158925 + 494 15640192 - VC0162 - ketol-acid reductoisomerase 161 46.03 0 159052..159303 - 83 15640193 - VC0163 - hypothetical protein 162 50.05 0 159419..162529 - 1036 15640194 - VC0164 - multidrug resistance protein, putative 163 47.15 0 162541..163647 - 368 15640195 - VC0165 - hypothetical protein 164 42.38 -1 163666..164262 - 198 15640196 - VC0166 - TetR family transcriptional regulator 165 48.76 0 164408..166423 + 671 15640197 - VC0167 - ATP-dependent DNA helicase Rep 166 50.25 0 166490..166897 - 135 15640198 - VC0168 - cytochrome c5 167 30.36 -2 168232..168399 - 55 15640199 - VC0169 - hypothetical protein 168 50.29 0 168532..170247 + 571 15640200 - VC0170 - peptide ABC transporter, ATP-binding protein 169 47.70 0 170267..171895 + 542 15640201 - VC0171 - peptide ABC transporter, periplasmic peptide-binding protein 170 50.15 0 171999..173027 + 342 15640202 - VC0172 - peptide ABC transporter, permease protein 171 50.69 0 173030..173968 + 312 15640203 - VC0173 - peptide ABC transporter, permease protein 172 52.00 +1 174143..175090 + 315 15640204 - VC0174 - hypothetical protein 173 36.90 -2 175343..176941 - 532 15640205 - VC0175 - deoxycytidylate deaminase-related protein 174 39.16 -1 177450..177758 - 102 15640206 - VC0176 - transcriptional regulator, putative 175 37.77 -2 177861..178424 + 187 15640207 - VC0177 - hypothetical protein 176 42.51 -1 179338..180405 + 355 15640208 - VC0178 - patatin-related protein 177 41.80 -1 180419..181729 + 436 15640209 - VC0179 - hypothetical protein 178 43.53 0 181732..183486 + 584 15640210 - VC0180 - hypothetical protein 179 45.65 0 183476..183946 + 156 15640211 - VC0181 - hypothetical protein 180 37.27 -2 183957..184388 - 143 15640212 - VC0182 - hypothetical protein 181 37.55 -2 184360..186471 - 703 15640213 - VC0183 - hypothetical protein 182 39.61 -1 186481..188169 - 562 15640214 - VC0184 - hypothetical protein 183 36.95 -2 188166..189380 - 404 15640215 - VC0185 - transposase, putative 184 52.16 +1 189457..190821 - 454 15640216 - VC0186 - glutathione reductase 185 51.19 0 190915..191754 - 279 15640217 - VC0187 - hypothetical protein 186 52.13 +1 192034..194076 + 680 15640218 - VC0188 - oligopeptidase A 187 48.48 0 194101..194199 + 32 15640219 - VC0189 - hypothetical protein 188 53.08 +1 194214..196385 + 723 15640220 uvrD VC0190 - DNA-dependent helicase II 189 51.42 0 197130..197798 - 222 15640221 - VC0191 - hypothetical protein 190 50.06 0 197873..198685 - 270 15640222 - VC0192 - AraC/XylS family transcriptional regulator 191 46.88 0 198722..198817 - 31 15640223 - VC0193 - hypothetical protein 192 55.29 +1 198833..200599 - 588 15640224 - VC0194 - gamma-glutamyltranspeptidase 193 52.26 +1 200761..201669 - 302 15640225 - VC0195 - rarD protein 194 52.89 +1 201830..203665 + 611 161582034 - VC0196 - ATP-dependent DNA helicase RecQ 195 52.67 +1 203658..203957 + 99 15640227 - VC0197 - gene 3 protein-related protein 196 50.00 0 204113..204490 + 125 15640228 - VC0198 - hypothetical protein 197 50.71 0 204526..206361 - 611 15640229 - VC0199 - hemolysin secretion ATP-binding protein, putative 198 49.56 0 206433..208589 + 718 15640230 - VC0200 - iron(III) compound receptor 199 52.33 +1 208648..209505 + 285 15640231 - VC0201 - iron(III) ABC transporter, ATP-binding protein 200 53.54 +1 209496..210455 + 319 15640232 - VC0202 - iron(III) ABC transporter, periplasmic iron-compound-binding protein 201 56.01 +2 210452..212413 + 653 15640233 - VC0203 - iron-hydroxamate transporter permease subunit 202 53.36 +1 212440..213288 - 282 15640234 - VC0204 - hypothetical protein 203 35.94 -2 213331..213522 + 63 15640235 - VC0205 - hypothetical protein 204 53.70 +1 213504..214421 + 305 15640236 murQ VC0206 - N-acetylmuramic acid-6-phosphate etherase 205 51.90 +1 214449..215897 + 482 15640237 murP VC0207 - N-acetylmuramic acid phosphotransfer permease 206 43.35 0 216004..216492 - 162 15640238 - VC0208 - hypothetical protein 207 52.13 +1 216558..217424 - 288 15640239 - VC0209 - hypothetical protein 208 52.72 +1 217588..218304 + 238 161582033 rph VC0210 - ribonuclease PH 209 48.13 0 218670..219311 + 213 161582032 pyrE VC0211 - orotate phosphoribosyltransferase 210 52.76 +1 219397..220374 - 325 15640242 - VC0212 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 211 49.53 0 220385..221341 - 318 15640243 - VC0213 - lipid A biosynthesis lauroyl acyltransferase 212 48.05 0 221338..221928 - 196 161582031 slmA VC0214 - nucleoid occlusion protein 213 55.25 +1 222087..223286 - 399 15640245 - VC0215 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 214 50.44 0 223454..225148 + 564 15640246 - VC0216 - methyl-accepting chemotaxis protein 215 51.26 0 225260..225934 + 224 15640247 radC VC0217 - DNA repair protein RadC 216 44.73 0 226229..226465 + 78 15640248 - VC0218 - ribosomal protein L28 217 42.86 -1 226479..226646 + 55 15640249 rpmG VC0219 - 50S ribosomal protein L33 218 49.28 0 226867..227355 + 162 15640250 - VC0220 - hypothetical protein 219 52.22 +1 227365..228174 + 269 15640251 - VC0221 - formamidopyrimidine-DNA glycosylase 220 49.09 0 228271..228765 - 164 15640252 coaD VC0222 - phosphopantetheine adenylyltransferase 221 51.45 0 228876..229913 + 345 15640253 - VC0223 - ADP-heptose--LPS heptosyltransferase II, putative 222 49.10 0 229975..230754 - 259 15640254 - VC0224 - lipopolysaccharide biosynthesis glycosyltransferase, putative 223 51.68 0 230797..231870 - 357 15640255 - VC0225 - lipopolysaccharide biosynthesis protein, putative 224 39.58 -1 231873..231968 - 31 15640256 - VC0226 - hypothetical protein 225 46.16 0 231950..232705 + 251 15640257 - VC0227 - 3-deoxy-D-manno-octulosonic-acid kinase 226 32.60 -2 232709..233668 + 319 15640258 - VC0228 - hypothetical protein 227 43.98 0 233672..234601 - 309 15640259 - VC0229 - hypothetical protein 228 46.24 0 234598..235341 - 247 15640260 - VC0230 - hypothetical protein 229 45.52 0 235338..236921 - 527 15640261 - VC0231 - hypothetical protein 230 44.09 0 236912..237292 - 126 15640262 - VC0232 - hypothetical protein 231 47.50 0 237289..238608 - 439 15640263 - VC0233 - 3-deoxy-D-manno-octulosonic-acid transferase 232 44.23 0 238569..239357 - 262 15640264 - VC0234 - hypothetical protein 233 44.48 0 239354..240403 - 349 15640265 - VC0235 - lipopolysaccharide biosynthesis protein, putative 234 46.30 0 240400..241440 - 346 15640266 - VC0236 - ADP-heptose--LPS heptosyltransferase II 235 35.33 -2 241437..242636 - 399 15640267 - VC0237 - hypothetical protein 236 37.04 -2 242638..243204 - 188 15640268 - VC0238 - hexapaptide repeat-containing transferase 237 45.23 0 243212..244984 - 590 15640269 - VC0239 - hypothetical protein 238 46.14 0 245143..246087 - 314 15640270 rfaD VC0240 - ADP-L-glycero-D-mannoheptose-6-epimerase 239 42.13 -1 246529..247926 + 465 15640271 - VC0241 - mannose-1-phosphate guanylyltransferase 240 38.65 -2 247929..249320 + 463 15640272 - VC0242 - phosphomannomutase 241 39.57 -1 249323..250444 + 373 15640273 - VC0243 - GDP-mannose 4,6-dehydratase 242 40.04 -1 250455..251558 + 367 15640274 - VC0244 - perosamine synthase 243 35.13 -2 251555..252946 + 463 15640275 - VC0245 - rfbG protein 244 34.84 -2 252918..253712 + 264 15640276 - VC0246 - lipopolysaccharide/O-antigen transport protein 245 36.40 -2 253651..254466 + 271 15640277 - VC0247 - lipopolysaccharide/O-antigen transport protein 246 33.33 -2 254505..254747 + 80 15640278 - VC0248 - acyl carrier protein, putative 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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