version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 963 32.44 0 994909..995244 + 111 42526482 - TDE0970 - hypothetical protein 964 41.57 0 995319..997091 + 590 42526483 argS TDE0971 - arginyl-tRNA synthetase 965 39.18 0 997167..998021 + 284 42526484 - TDE0972 - comF-related protein 966 43.51 +1 998030..998707 - 225 42526485 radC TDE0973 - DNA repair protein RadC 967 46.08 +1 998834..998935 + 33 42526486 - TDE0974 - hypothetical protein 968 38.57 0 999061..999939 + 292 42526487 - TDE0975 - hypothetical protein 969 43.00 0 1000166..1000558 + 130 42526488 - TDE0976 - hypothetical protein 970 51.83 +2 1000555..1001700 + 381 42526489 - TDE0977 - hypothetical protein 971 49.06 +2 1002008..1002484 + 158 42526490 - TDE0978 - hypothetical protein 972 38.48 0 1002600..1004036 - 478 42526491 - TDE0979 - penicillin binding protein 973 43.95 +1 1004069..1005490 - 473 42526492 asnC TDE0980 - asparaginyl-tRNA synthetase 974 36.25 0 1005636..1006595 + 319 42526493 - TDE0981 - hypothetical protein 975 45.05 +1 1006617..1008392 + 591 42526494 - TDE0982 - dihydroorotate dehydrogenase/oxidoreductase, FAD-binding 976 39.80 0 1009614..1011113 + 499 42526495 - TDE0984 - oligopeptide/dipeptide ABC transporter, permease protein, putative 977 42.00 0 1011177..1013114 + 645 42526496 - TDE0985 - oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein, putative 978 42.10 0 1013201..1014181 + 326 42526497 - TDE0986 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 979 43.89 +1 1014181..1015137 + 318 42526498 - TDE0987 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 980 38.99 0 1015222..1017165 + 647 42526499 - TDE0988 - oligopeptide/dipeptide ABC transporter, peptide-binding protein 981 35.02 0 1017272..1017508 + 78 42526500 - TDE0989 - hypothetical protein 982 37.04 0 1017538..1017888 + 116 42526501 - TDE0990 - hypothetical protein 983 36.46 0 1017964..1018155 - 63 42526502 rpmB TDE0991 - ribosomal protein L28 984 39.13 0 1018411..1019100 - 229 42526503 - TDE0992 - 5-formyltetrahydrofolate cyclo-ligase family protein 985 37.59 0 1019072..1020505 - 477 42526504 - TDE0993 - putative lipoprotein 986 39.84 0 1020678..1022507 + 609 42526505 - TDE0994 - hypothetical protein 987 22.96 -2 1022532..1022666 - 44 42526506 - TDE0995 - hypothetical protein 988 40.93 0 1022625..1024058 + 477 42526507 - TDE0996 - hypothetical protein 989 41.30 0 1024132..1025373 - 413 42526508 gdhA TDE0997 - glutamate dehydrogenase 990 33.80 0 1025342..1025554 + 70 42526509 - TDE0998 - hypothetical protein 991 42.53 0 1026010..1026846 + 278 42526510 - TDE0999 - formate/nitrite transporter 992 44.14 +1 1026903..1027781 + 292 42526511 - TDE1000 - 3-hydroxyacid dehydrogenase family protein 993 44.40 +1 1027793..1028497 + 234 42526512 pyrE TDE1001 - orotate phosphoribosyltransferase 994 36.22 0 1028535..1029227 - 230 42526513 - TDE1002 - hypothetical protein 995 26.67 -1 1029251..1029385 + 44 42526514 - TDE1003 - hypothetical protein 996 44.02 +1 1029366..1030226 - 286 42526515 - TDE1004 - flagellar filament core protein 997 28.57 -1 1030346..1030555 + 69 42526516 - TDE1005 - hypothetical protein 998 41.94 0 1030567..1031379 + 270 42526517 flgG-1 TDE1006 - flagellar basal-body rod protein FlgG 999 47.17 +1 1031401..1032195 + 264 42526518 flgG TDE1007 - flagellar basal body rod protein FlgG 1000 44.28 +1 1032246..1032866 + 206 42526519 - TDE1008 - flagellar protein, putative 1001 40.40 0 1033093..1035186 - 697 42526520 - TDE1009 - methyl-accepting chemotaxis protein 1002 46.46 +1 1035367..1038231 + 954 42526521 uvrA TDE1010 - excinuclease ABC, A subunit 1003 34.26 0 1038241..1041462 + 1073 42526522 - TDE1011 - hypothetical protein 1004 43.44 +1 1041533..1043986 + 817 42526523 - TDE1012 - tex protein, putative 1005 30.43 -1 1044067..1044480 - 137 42526524 - TDE1013 - hemerythrin-related protein 1006 35.88 0 1044537..1045634 - 365 42526525 - TDE1014 - hypothetical protein 1007 34.80 0 1045456..1045659 + 67 42526526 - TDE1015 - hypothetical protein 1008 44.03 +1 1048075..1049271 + 398 42526527 xseA TDE1017 - exodeoxyribonuclease VII, large subunit 1009 34.73 0 1049367..1049795 + 142 42526528 - TDE1018 - hypothetical protein 1010 38.64 0 1049792..1051639 - 615 42526529 - TDE1019 - dicarboxylate transporter, DctM subunit, putative 1011 37.41 0 1051655..1052683 - 342 42526530 - TDE1020 - dicarboxylate transporter, periplasmic dicarboxylate-binding protein, putative 1012 40.10 0 1052680..1053654 - 324 42526531 - TDE1021 - putative lipoprotein 1013 31.75 0 1054002..1055078 - 358 42526532 - TDE1022 - ISTde2, transposase 1014 40.24 0 1055263..1055682 + 139 42526533 mamA TDE1023 - methylaspartate mutase subunit S 1015 44.20 +1 1055715..1057094 + 459 42526534 - TDE1024 - hypothetical protein 1016 42.86 0 1057241..1057429 + 62 42526535 rpmF TDE1025 - 50S ribosomal protein L32 1017 37.97 0 1057442..1057678 + 78 42526536 acpP TDE1026 - acyl carrier protein 1018 42.11 0 1057702..1058442 + 246 42526537 rnc TDE1027 - ribonuclease III 1019 39.13 0 1058584..1058721 + 45 42526538 - TDE1028 - hypothetical protein 1020 39.46 0 1058714..1059154 + 146 42526539 - TDE1029 - Hsp20/alpha crystallin family protein 1021 36.40 0 1059254..1060102 + 282 42526540 - TDE1030 - hypothetical protein 1022 25.00 -2 1060150..1060245 + 31 42526541 - TDE1031 - hypothetical protein 1023 40.51 0 1060294..1061157 + 287 42526542 - TDE1032 - hypothetical protein 1024 44.84 +1 1061209..1062555 + 448 42526543 - TDE1033 - polyA polymerase family protein 1025 37.94 0 1062594..1063526 + 310 42526544 - TDE1034 - magnesium and cobalt transporter, putative 1026 40.67 0 1063594..1063920 + 108 42526545 - TDE1035 - PadR family transcriptional regulator 1027 36.02 0 1063945..1064613 + 222 42526546 - TDE1036 - hypothetical protein 1028 32.02 0 1064610..1065521 + 303 42526547 - TDE1037 - hypothetical protein 1029 40.71 0 1065495..1067066 - 523 42526548 - TDE1038 - hypothetical protein 1030 41.44 0 1067212..1068075 + 287 42526549 - TDE1039 - riboflavin biosynthesis protein, putative 1031 40.74 0 1068079..1068348 + 89 42526550 rpsO TDE1040 - 30S ribosomal protein S15 1032 45.73 +1 1068464..1070560 + 698 42526551 pnp TDE1041 - polynucleotide phosphorylase/polyadenylase 1033 47.13 +1 1070632..1071066 + 144 42526552 dut TDE1042 - deoxyuridine 5'triphosphate nucleotidohydrolase 1034 35.98 0 1071085..1072218 + 377 42526553 - TDE1043 - hypothetical protein 1035 35.38 0 1072215..1073288 + 357 42526554 - TDE1044 - hypothetical protein 1036 34.29 0 1073380..1073799 + 139 42526555 - TDE1045 - hypothetical protein 1037 33.90 0 1073786..1074136 + 116 42526556 - TDE1046 - hypothetical protein 1038 48.53 +1 1074237..1074611 + 124 42526557 rpsL TDE1047 - 30S ribosomal protein S12 1039 46.92 +1 1074622..1075092 + 156 42526558 rpsG TDE1048 - 30S ribosomal protein S7 1040 44.11 +1 1075427..1077514 + 695 42526559 fusA-2 TDE1049 - elongation factor G 1041 40.20 0 1077527..1078210 + 227 42526560 - TDE1050 - hypothetical protein 1042 35.09 0 1078302..1078586 - 94 42526561 - TDE1051 - hypothetical protein 1043 45.28 +1 1078802..1078960 - 52 42526562 - TDE1052 - rubredoxin 1044 37.51 0 1079020..1080816 - 598 42526563 - TDE1053 - putative lipoprotein 1045 37.04 0 1080980..1083058 + 692 42526564 - TDE1054 - methyl-accepting chemotaxis protein 1046 40.00 0 1083072..1084421 - 449 42526565 - TDE1055 - MATE efflux family protein 1047 48.84 +2 1085350..1085955 + 201 42526566 - TDE1056 - hypothetical protein 1048 43.97 +1 1086195..1086335 - 46 42526567 - TDE1057 - hypothetical protein 1049 37.78 0 1086322..1086456 - 44 42526568 - TDE1058 - hypothetical protein 1050 30.56 -1 1086588..1086695 - 35 42526569 - TDE1059 - hypothetical protein 1051 34.07 0 1086659..1086793 + 44 42526570 - TDE1060 - hypothetical protein 1052 37.59 0 1086786..1088570 + 594 42526571 - TDE1061 - ABC transporter ATP-binding protein/peptidase 1053 38.98 0 1088570..1090447 + 625 42526572 - TDE1062 - ABC transporter ATP-binding protein 1054 44.58 +1 1090647..1093028 + 793 42526573 metG TDE1063 - methionyl-tRNA synthetase 1055 36.48 0 1093121..1093756 - 211 42526574 - TDE1064 - hypothetical protein 1056 34.36 0 1093753..1094241 - 162 42526575 - TDE1065 - hypothetical protein 1057 40.48 0 1094425..1094634 - 69 42526576 - TDE1066 - hypothetical protein 1058 42.49 0 1094634..1095791 - 385 42526577 - TDE1067 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 1059 41.99 0 1095784..1096776 - 330 42526578 - TDE1068 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 1060 41.30 0 1096773..1097789 - 338 42526579 - TDE1069 - oligopeptide/dipeptide ABC transporter, permease protein 1061 37.13 0 1097790..1098815 - 341 42526580 - TDE1070 - oligopeptide/dipeptide ABC transporter, permease protein 1062 41.55 0 1098903..1100678 - 591 42526581 oppA TDE1071 - peptide ABC transporter, peptide-binding protein OppA 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.