version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1026 42.02 0 1080804..1081793 - 329 13541857 trpD TVN1026 - anthranilate phosphoribosyltransferase 1027 42.02 0 1081798..1082511 - 237 13541858 - TVN1027 - tryptophan synthase subunit alpha 1028 40.25 0 1082508..1083317 - 269 13541859 - TVN1028 - hypothetical protein 1029 37.50 0 1083343..1083726 - 127 13541860 - TVN1029 - hypothetical protein 1030 40.18 0 1083723..1084394 - 223 13541861 - TVN1030 - methylase involved in ubiquinone/menaquinone biosynthesis 1031 41.25 0 1084391..1084693 - 100 13541862 - TVN1031 - hypothetical protein 1032 42.90 0 1084690..1086789 - 699 13541863 - TVN1032 - ATPase involved in replication control 1033 39.70 0 1086877..1087473 - 198 13541864 - TVN1033 - aspartokinase beta subunit 1034 42.61 0 1087952..1088770 + 272 13541865 ppnK TVN1034 - inorganic polyphosphate/ATP-NAD kinase 1035 40.92 0 1088757..1089125 + 122 13541866 - TVN1035 - hypothetical protein 1036 46.16 +1 1089346..1091037 - 563 13541867 - TVN1036 - amino acid transporter 1037 41.27 0 1091235..1092683 + 482 13541868 pheS TVN1037 - phenylalanyl-tRNA synthetase subunit alpha 1038 34.16 -1 1092836..1093558 + 240 13541869 - TVN1038 - hypothetical protein 1039 41.69 0 1093610..1094530 + 306 13541870 - TVN1039 - ABC-type daunorubicin transport system, ATPase component 1040 40.32 0 1094511..1095254 + 247 13541871 - TVN1040 - ABC-type multidrug transport system, permease component 1041 37.23 -1 1095337..1095567 - 76 13541872 - TVN1041 - transposon-encoded protein 1042 43.73 0 1095610..1096917 - 435 13541873 - TVN1042 - ammonia permease 1043 43.00 0 1098308..1099635 + 441 13541874 - TVN1043 - major facilitator superfamily permease 1044 41.71 0 1099680..1100789 + 369 13541875 - TVN1044 - AAA family ATPase 1045 42.04 0 1100740..1102599 - 619 13541876 - TVN1045 - DNA polymerase I 1046 44.07 0 1102602..1102778 - 58 13541877 - TVN1046 - hypothetical protein 1047 37.92 0 1102801..1103214 - 137 13541878 - TVN1047 - hypothetical protein 1048 40.86 0 1103735..1104505 + 256 13541879 - TVN1048 - ABC-type Fe3+-siderophores transporter, solute-binding component 1049 45.16 +1 1104527..1106725 - 732 13541880 - TVN1049 - elongation factor EF-2 1050 45.40 +1 1106762..1107076 - 104 13541881 rps10p TVN1050 - 30S ribosomal protein S10P 1051 46.59 +1 1107082..1108356 - 424 13541882 - TVN1051 - elongation factor 1-alpha 1052 40.98 0 1108542..1109522 + 326 13541883 moaA TVN1052 - molybdenum cofactor biosynthesis protein A 1053 40.54 0 1109669..1110889 + 406 13541884 - TVN1053 - major facilitator superfamily permease 1054 45.83 +1 1110903..1112447 - 514 13541885 - TVN1054 - NAD-dependent aldehyde dehydrogenase 1055 33.90 -2 1112501..1112677 - 58 13541886 - TVN1055 - hypothetical protein 1056 41.84 0 1112685..1113848 - 387 13541887 - TVN1056 - arsenite transporting ATPase 1057 41.28 0 1113858..1114838 - 326 13541888 - TVN1057 - octaprenyl diphosphate synthase 1058 40.74 0 1115434..1115703 - 89 13541889 - TVN1058 - chromatin protein 1059 38.18 0 1116040..1116741 + 233 13541890 - TVN1059 - 3-oxoacyl-[acyl-carrier-protein] reductase 1060 42.86 0 1116776..1117951 - 391 13541891 - TVN1060 - major facilitator superfamily permease 1061 37.63 0 1118431..1118709 + 92 13541892 - TVN1061 - hypothetical protein 1062 41.03 0 1118724..1119464 - 246 13541893 - TVN1062 - DNA polymerase sliding clamp 1063 40.95 0 1119628..1120467 - 279 13541894 - TVN1063 - hypothetical protein 1064 38.86 0 1120468..1121769 - 433 13541895 - TVN1064 - hypothetical protein 1065 41.98 0 1121766..1122725 - 319 13541896 - TVN1065 - MoxR-like ATPase 1066 39.06 0 1122712..1123095 - 127 13541897 - TVN1066 - hypothetical protein 1067 35.74 -1 1123172..1123753 - 193 13541898 - TVN1067 - hypothetical protein 1068 37.09 -1 1123753..1126494 - 913 13541899 - TVN1068 - hypothetical protein 1069 38.36 0 1126727..1128259 - 510 13541900 - TVN1069 - queuine tRNA-ribosyltransferase 1070 40.08 0 1128771..1129511 - 246 13541901 truA TVN1070 - tRNA pseudouridine synthase A 1071 42.58 0 1129508..1130524 - 338 13541902 - TVN1071 - tRNA 2'-O-methylase 1072 40.04 0 1130521..1131027 - 168 13541903 - TVN1072 - hypothetical protein 1073 38.89 0 1131371..1131532 - 53 13541904 - TVN1073 - hypothetical protein 1074 37.91 0 1131795..1132799 + 334 13541905 - TVN1074 - methyltransferase 1075 40.74 0 1133061..1133276 - 71 13541906 - TVN1075 - small nuclear ribonucleoprotein (snRNP)-like protein 1076 33.33 -2 1133289..1133450 - 53 13541907 - TVN1076 - hypothetical protein 1077 41.05 0 1133467..1134075 - 202 13541908 - TVN1077 - exosome complex RNA-binding protein Csl4 1078 38.61 0 1134366..1135520 + 384 13541909 - TVN1078 - major facilitator superfamily permease 1079 42.07 0 1135544..1136722 - 392 13541910 - TVN1079 - succinyl-diaminopimelate desuccinylase 1080 39.66 0 1136823..1137407 + 194 13541911 - TVN1080 - hypothetical protein 1081 40.68 0 1137473..1138861 + 462 13541912 - TVN1081 - prolyl-tRNA synthetase 1082 38.81 0 1138861..1139499 + 212 13541913 - TVN1082 - phosphoserine phosphatase 1083 43.45 0 1139885..1140823 - 312 13541914 tfb TVN1083 - transcription initiation factor IIB 1084 39.61 0 1140833..1141039 - 68 13541915 - TVN1084 - H/ACA RNA-protein complex component Gar1 1085 36.50 -1 1141285..1142262 + 325 13541916 - TVN1085 - GTPase 1086 41.53 0 1142243..1143889 + 548 13541917 gltX TVN1086 - glutamyl-tRNA synthetase 1087 34.12 -1 1143890..1144144 - 84 13541918 - TVN1087 - hypothetical protein 1088 43.02 0 1144148..1144756 - 202 13541919 - TVN1088 - GMP synthase subunit A 1089 43.84 0 1144753..1145694 - 313 13541920 tfb TVN1089 - transcription initiation factor IIB 1090 39.16 0 1146079..1147365 + 428 13541921 aspC TVN1090 - aspartyl-tRNA synthetase 1091 38.10 0 1147653..1148597 + 314 13541922 - TVN1091 - 3-hydroxyacyl-CoA dehydrogenase 1092 42.36 0 1148602..1148889 - 95 13541923 - TVN1092 - hypothetical protein 1093 39.81 0 1149034..1149465 - 143 13541924 - TVN1093 - transcription factor 1094 40.51 0 1149537..1150205 + 222 13541925 - TVN1094 - fibrillarin 1095 40.83 0 1150252..1150731 + 159 13541926 - TVN1095 - 6-pyruvoyl-tetrahydropterin synthase 1096 40.77 0 1150733..1151458 + 241 13541927 - TVN1096 - ATPase 1097 43.25 0 1151701..1152678 - 325 13541928 - TVN1097 - malate dehydrogenase 1098 39.08 0 1152945..1154372 + 475 13541929 - TVN1098 - ATPase 1099 42.48 0 1154375..1154986 - 203 13541930 - TVN1099 - putative peroxiredoxin 1100 43.17 0 1155064..1156029 - 321 13541931 - TVN1100 - delta-aminolevulinic acid dehydratase 1101 38.14 0 1156112..1156444 + 110 13541932 - TVN1101 - hypothetical protein 1102 38.62 0 1156448..1156693 - 81 13541933 - TVN1102 - hypothetical protein 1103 39.64 0 1156690..1157022 - 110 13541934 - TVN1103 - hypothetical protein 1104 39.45 0 1157047..1158468 - 473 13541935 - TVN1104 - NADH dehydrogenase subunit N 1105 40.17 0 1158465..1160015 - 516 13541936 - TVN1105 - NADH dehydrogenase subunit M 1106 42.90 0 1160017..1161072 - 351 13541937 - TVN1106 - NADH:ubiquinone oxidoreductase subunit 5 (chain L) 1107 42.74 0 1161017..1162015 - 332 13541938 - TVN1107 - NADH:ubiquinone oxidoreductase subunit 5 (chain L) 1108 39.10 0 1162018..1162329 - 103 13541939 - TVN1108 - NADH dehydrogenase subunit K 1109 38.81 0 1162330..1162548 - 72 13541940 - TVN1109 - NADH dehydrogenase subunit J 1110 34.94 -1 1162541..1162789 - 82 13541941 - TVN1110 - NADH dehydrogenase subunit J 1111 39.57 0 1162786..1163250 - 154 13541942 - TVN1111 - NADH dehydrogenase subunit I 1112 38.90 0 1163214..1164254 - 346 13541943 - TVN1112 - NADH dehydrogenase subunit H 1113 43.03 0 1164251..1165354 - 367 13541944 - TVN1113 - NADH dehydrogenase subunit D 1114 42.76 0 1165354..1165809 - 151 13541945 - TVN1114 - NADH dehydrogenase subunit C 1115 44.09 0 1165809..1166282 - 157 13541946 - TVN1115 - NADH dehydrogenase subunit B 1116 40.13 0 1166270..1166725 - 151 13541947 - TVN1116 - NADH dehydrogenase subunit A 1117 39.57 0 1166951..1168747 - 598 13541948 - TVN1117 - glutamyl-tRNA(Gln) amidotransferase subunit E 1118 39.89 0 1168744..1169964 - 406 13541949 - TVN1118 - glutamyl-tRNA(Gln) amidotransferase subunit D 1119 37.21 -1 1170047..1170820 + 257 13541950 - TVN1119 - hypothetical protein 1120 42.60 0 1170798..1171952 - 384 13541951 - TVN1120 - Acyl-CoA dehydrogenase 1121 38.64 0 1172230..1173228 - 332 13541952 - TVN1121 - DNA primase small subunit 1122 37.04 -1 1173264..1176557 + 1097 13541953 - TVN1122 - serine protease 1123 38.55 0 1176554..1177588 - 344 13541954 - TVN1123 - methionine synthase 1124 37.41 -1 1177590..1178471 - 293 13541955 - TVN1124 - hypothetical protein 1125 39.27 0 1178481..1179272 - 263 13541956 - TVN1125 - 5,10-methylenetetrahydrofolate reductase 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.