version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 866 57.80 0 922573..923790 + 405 86608370 - CYB_0890 - coproporphyrinogen III oxidase 867 55.28 0 923978..924469 - 163 86608371 - CYB_0891 - nucleotide-binding protein 868 58.18 0 924587..925423 + 278 86608372 - CYB_0892 - short chain dehydrogenase/reductase family oxidoreductase 869 56.56 0 925552..925917 + 121 86608373 - CYB_0894 - FHA domain-containing protein 870 63.03 +1 925904..927250 - 448 86608374 - CYB_0893 - polysaccharide biosynthesis family protein 871 64.24 +1 927346..929199 + 617 86608375 - CYB_0895 - penicillin-binding protein 872 54.25 -1 929515..929820 + 101 86608376 hup-2 CYB_0896 - DNA-binding protein HU 873 63.05 +1 929856..930989 + 377 86608377 cobD-1 CYB_0897 - threonine-phosphate decarboxylase 874 61.06 0 931015..931674 + 219 86608378 - CYB_0898 - hypothetical protein 875 59.52 0 931957..932838 + 293 86608379 - CYB_0899 - hypothetical protein 876 62.69 +1 932848..933651 - 267 86608380 - CYB_0900 - hypothetical protein 877 61.09 0 933678..934340 - 220 86608381 purN CYB_0901 - phosphoribosylglycinamide formyltransferase 878 55.21 0 934371..934466 - 31 86608382 - CYB_0902 - hypothetical protein 879 59.46 0 934438..934659 + 73 86608383 - CYB_0903 - hypothetical protein 880 60.44 0 934708..935205 + 165 86608384 - CYB_0904 - hypothetical protein 881 59.24 0 935223..935801 + 192 86608385 aat CYB_0905 - leucyl/phenylalanyl-tRNA--protein transferase 882 56.29 0 935939..936439 + 166 86608386 - CYB_0906 - low molecular weight phosphotyrosine protein phosphatase family protein 883 46.05 -2 936730..937020 - 96 86608387 - CYB_0907 - nucleotidyltransferase domain-containing protein 884 61.39 0 940185..944147 + 1320 86608388 chlH CYB_0908 - magnesium chelatase 885 63.85 +1 944225..945076 - 283 86608389 gspO CYB_0909 - prepilin peptidase 886 56.22 0 945217..945417 - 66 86608390 - CYB_0910 - hypothetical protein 887 59.14 0 945778..948474 - 898 86608391 cphA CYB_0911 - cyanophycin synthetase 888 64.21 +1 948732..951008 + 758 86608392 - CYB_0912 - DNA internalization competence protein 889 61.40 0 951191..951475 - 94 86608393 - CYB_0913 - hypothetical protein 890 57.21 0 951715..952518 + 267 86608394 - CYB_0914 - stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein 891 58.36 0 952599..953537 + 312 86608395 - CYB_0915 - HflC/HflK family protein 892 60.43 0 953731..954756 + 341 86608396 - CYB_0917 - response regulator 893 62.34 0 954734..955426 - 230 86608397 - CYB_0916 - ComF family protein 894 60.78 0 955636..956043 + 135 86608398 rpsL CYB_0918 - 30S ribosomal protein S12 895 61.78 0 956127..956597 + 156 86608399 rpsG CYB_0919 - 30S ribosomal protein S7 896 58.10 0 956750..958873 + 707 86608400 fusA CYB_0920 - elongation factor G 897 58.54 0 958905..960134 + 409 86608401 tuf CYB_0921 - elongation factor Tu 898 55.97 0 960259..960576 + 105 86608402 rpsJ CYB_0922 - 30S ribosomal protein S10 899 61.56 0 960698..961558 + 286 86608403 dapB CYB_0924 - dihydrodipicolinate reductase 900 63.40 +1 961555..962472 - 305 86608404 - CYB_0923 - methylenetetrahydrofolate reductase family protein 901 64.60 +1 962550..964145 - 531 86608405 - CYB_0925 - hypothetical protein 902 62.42 0 964370..965122 - 250 86608406 - CYB_0926 - hypothetical protein 903 63.68 +1 965343..966683 - 446 86608407 - CYB_0927 - oxidoreductase, FAD-dependent 904 61.30 0 966778..967392 - 204 86608408 - CYB_0928 - hypothetical protein 905 60.79 0 967382..968164 - 260 86608409 tatC CYB_0929 - Sec-independent protein translocase TatC 906 61.21 0 968327..969535 - 402 86608410 - CYB_0930 - polar amino acid ABC transporter permease 907 61.89 0 969539..970711 - 390 86608411 - CYB_0931 - polar amino acid ABC transporter permease 908 60.02 0 970810..971847 - 345 86608412 - CYB_0932 - polar amino acid ABC transporter periplasmic amino acid-binding protein 909 55.89 0 972111..972899 + 262 86608413 - CYB_0933 - polar amino acid ABC transporter ATP-binding protein 910 62.19 0 972908..973756 - 282 86608414 - CYB_0934 - hypothetical protein 911 58.33 0 973785..974000 + 71 86608415 - CYB_0935 - hypothetical protein 912 63.06 +1 974140..975555 + 471 86608416 - CYB_0936 - hydrophobic amino acid uptake ABC transporter periplasmic amino acid-binding protein 913 63.60 +1 975617..976432 + 271 86608417 trpA CYB_0937 - tryptophan synthase subunit alpha 914 50.34 -1 976520..976666 - 48 86608418 - CYB_0938 - hypothetical protein 915 57.42 0 976892..977410 + 172 86608419 cpcB-1 CYB_0939 - phycocyanin, beta subunit 916 57.46 0 977556..978044 + 162 86608420 cpcA-1 CYB_0940 - phycocyanin, alpha subunit 917 61.48 0 978360..978629 + 89 86608421 cpcD CYB_0941 - phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod 918 63.48 +1 978721..979473 + 250 86608422 cpcE-1 CYB_0942 - phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit 919 61.88 0 979490..980179 + 229 86608423 cpcF CYB_0943 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit 920 59.23 0 980238..980963 + 241 86608424 cpcG1 CYB_0944 - phycobilisome rod-core linker polypeptide cpcG1 921 59.62 0 981105..981416 + 103 86608425 - CYB_0945 - hypothetical protein 922 57.45 0 981446..983149 + 567 86608426 - CYB_0946 - hypothetical protein 923 57.92 0 983149..983868 + 239 86608427 - CYB_0947 - putatve protein phosphatase 924 62.31 0 983880..984797 - 305 86608428 - CYB_0948 - histone deacetylase family protein 925 62.28 0 984929..986818 + 629 86608429 - CYB_0949 - serine/threonine protein kinase 926 61.44 0 986822..989176 + 784 86608430 - CYB_0950 - 1A family penicillin-binding protein 927 58.70 0 989823..991103 - 426 86608431 - CYB_0952 - major facilitator transporter 928 57.63 0 991147..991323 - 58 86608432 - CYB_0953 - hypothetical protein 929 58.38 0 992536..993054 - 172 86608433 - CYB_0954 - HNH endonuclease domain-containing protein 930 61.14 0 993210..995417 + 735 86608434 - CYB_0955 - glycosy hydrolase family protein 931 61.83 0 995445..996395 + 316 86608435 pip CYB_0956 - prolyl aminopeptidase 932 56.94 0 996392..996535 + 47 86608436 - CYB_0957 - hypothetical protein 933 59.21 0 996438..997175 + 245 86608437 - CYB_0958 - PDZ domain-containing protein 934 60.52 0 997207..997515 + 102 86608438 - CYB_0959 - hypothetical protein 935 64.41 +1 997526..999121 + 531 86608439 - CYB_0961 - hydantoinase/oxoprolinase family protein 936 54.93 0 999058..999534 - 158 86608440 trx-2 CYB_0960 - thioredoxin 937 56.41 0 999485..1000225 - 246 86608441 - CYB_0962 - NnrU family protein 938 56.72 0 1000294..1000695 + 133 86608442 - CYB_0963 - putative photosystem II protein 939 60.00 0 1000925..1001389 + 154 86608443 - CYB_0964 - YHS domain-containing protein 940 60.92 0 1001414..1002196 - 260 86608444 - CYB_0965 - sensor histidine kinase 941 63.17 +1 1002317..1003060 - 247 86608445 - CYB_0966 - HemK family methyltransferase 942 59.30 0 1003217..1004071 - 284 86608446 - CYB_0967 - chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein 943 53.65 -1 1004569..1004760 + 63 86608447 - CYB_0968 - hypothetical protein 944 50.00 -2 1004790..1004909 + 39 86608448 - CYB_0969 - hypothetical protein 945 60.18 0 1004906..1007419 + 837 86608449 - CYB_0970 - U32 family peptidase 946 57.14 0 1007584..1008108 + 174 86608450 ilvH CYB_0971 - acetolactate synthase 3 regulatory subunit 947 61.35 0 1008126..1008764 + 212 86608451 - CYB_0972 - putative lipoprotein 948 60.84 0 1008790..1009407 - 205 86608452 - CYB_0973 - hypothetical protein 949 60.54 0 1009689..1010732 + 347 86608453 glk CYB_0974 - glucokinase 950 59.42 0 1010729..1011004 + 91 86608454 - CYB_0975 - hypothetical protein 951 59.86 0 1011012..1012010 + 332 86608455 - CYB_0976 - cyclopropane-fatty-acyl-phospholipid synthase family protein 952 63.96 +1 1012024..1013241 + 405 86608456 - CYB_0978 - 2-octaprenyl-6-methoxyphenyl hydroxylase 953 59.38 0 1013238..1014965 - 575 86608457 - CYB_0977 - hypothetical protein 954 54.69 0 1015075..1016268 + 397 86608458 - CYB_0979 - ISSoc1, transposase 955 57.96 0 1016270..1017004 - 244 86608459 - CYB_0980 - hypothetical protein 956 47.62 -2 1017099..1017203 - 34 86608460 - CYB_0981 - hypothetical protein 957 53.39 -1 1017330..1017698 - 122 86608461 - CYB_0982 - hypothetical protein 958 61.82 0 1018038..1019276 + 412 86608462 coaBC CYB_0983 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 959 55.27 0 1019366..1020172 - 268 86608463 sppA-2 CYB_0984 - signal peptide peptidase SppA, 36K type 960 62.13 0 1020247..1020951 - 234 86608464 fabG CYB_0985 - 3-ketoacyl-(acyl-carrier-protein) reductase 961 63.72 +1 1021057..1021905 - 282 86608465 ksgA CYB_0986 - dimethyladenosine transferase 962 59.47 0 1021950..1023713 - 587 86608466 - CYB_0987 - sensor histidine kinase 963 59.26 0 1023740..1024873 - 377 86608467 - CYB_0988 - PilT domain-containing protein 964 55.56 0 1025388..1025630 + 80 86608468 - CYB_0989 - NifU domain-containing protein 965 61.48 0 1025763..1026860 + 365 86608469 - CYB_0990 - membrane-associated zinc metalloprotease, putative 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0