version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 566 62.09 0 584583..585827 + 414 86608070 - CYB_0578 - S1C family peptidase 567 62.88 +1 586180..587103 + 307 86608071 - CYB_0579 - quaternary amine ABC transporter periplasmic substrate-binding protein 568 62.75 +1 587130..588098 + 322 86608072 - CYB_0580 - quaternary amine ABC transporter ATP-binding protein 569 63.43 +1 588095..588712 + 205 86608073 - CYB_0581 - quaternary amine ABC transporter permease 570 60.74 0 588838..589461 + 207 86608074 - CYB_0582 - RNA polymerase sigma factor 571 60.49 0 590399..591046 + 215 86608075 - CYB_0584 - VanW family protein 572 57.41 0 592183..593079 - 298 86608076 - CYB_0585 - CRISPR-associated protein APE2256 family 573 58.54 0 593129..593842 - 237 86608077 - CYB_0586 - hypothetical protein 574 60.74 0 593853..594932 - 359 86608078 - CYB_0587 - hypothetical protein 575 58.28 0 594935..595387 - 150 86608079 - CYB_0588 - hypothetical protein 576 60.45 0 595384..596364 - 326 86608080 - CYB_0589 - CRISPR-associated RAMP family protein 577 60.45 0 596531..597382 - 283 86608081 - CYB_0590 - CRISPR-associated Csm3 family protein 578 49.85 -2 597402..598049 - 215 86608082 - CYB_0591 - hypothetical protein 579 53.29 -1 598053..598493 - 146 86608083 - CYB_0592 - hypothetical protein 580 62.94 +1 598490..599722 - 410 86608084 csx10 CYB_0593 - CRISPR-associated RAMP Csx10 family protein 581 65.84 +1 599722..600444 - 240 86608085 - CYB_0594 - CRISPR-associated Csm3 family protein 582 60.88 0 600444..602654 - 736 86608086 crm2-1 CYB_0595 - CRISPR-associated RAMP Crm2 family protein 583 62.18 0 603175..604356 + 393 86608087 cas6 CYB_0596 - CRISPR-associated Cas family protein 584 56.95 0 605551..606744 + 397 86608088 - CYB_0598 - ISSoc1, transposase 585 58.78 0 606716..608173 - 485 86608089 - CYB_0597 - hypothetical protein 586 61.51 0 608339..609307 + 322 86608090 csx3 CYB_0599 - CRISPR-associated Csx3 family protein 587 62.63 +1 609411..610202 + 263 86608091 - CYB_0600 - ADP-ribosylglycohydrolase family protein 588 55.74 0 610278..611165 - 295 86608092 - CYB_0601 - nitrate ABC transporter, ATP-binding protein NtrD 589 57.01 0 611237..613234 - 665 86608093 ntrC-2 CYB_0602 - nitrate ABC transporter, ATP-binding proteins NtrC 590 52.42 -1 613303..614130 - 275 86608094 ntrB-2 CYB_0603 - nitrate ABC transporter, permease protein 591 57.55 0 614652..615956 - 434 86608095 - CYB_0604 - nitrate/nitrite/cyanate ABC transporter periplasmic substrate-binding protein 592 61.93 0 616167..617264 + 365 86608096 - CYB_0605 - putative tocopherol cyclase 593 60.93 0 617632..620106 + 824 86608097 clpC CYB_0607 - Clp protease, ATP-binding subunit ClpC 594 56.13 0 620234..620869 + 211 86608098 clpP-1 CYB_0608 - ATP-dependent Clp protease-like protein 595 57.03 0 621483..622094 + 203 86608099 clpP CYB_0610 - ATP-dependent Clp protease proteolytic subunit 596 61.72 0 622202..622504 + 100 86608100 - CYB_0611 - hypothetical protein 597 59.52 0 622509..623096 - 195 86608101 - CYB_0612 - hypothetical protein 598 62.72 +1 623105..624499 + 464 86608102 - CYB_0613 - malate dehydrogenase (oxaloacetate-decarboxylating) 599 60.03 0 624600..625292 - 230 86608103 - CYB_0614 - CRISPR-associated protein APE2256 family 600 59.71 0 625289..625561 - 90 86608104 - CYB_0615 - hypothetical protein 601 64.71 +1 625763..625966 + 67 86608105 - CYB_0616 - hypothetical protein 602 60.27 0 626315..626986 + 223 86608106 - CYB_0618 - hypothetical protein 603 61.35 0 626983..629181 - 732 86608107 - CYB_0617 - C14 family peptidase 604 56.90 0 629485..630702 + 405 86608108 - CYB_0620 - ISSoc1, transposase 605 57.80 0 630674..630955 - 93 86608109 - CYB_0619 - hypothetical protein 606 57.14 0 631020..631208 - 62 86608110 - CYB_0621 - hypothetical protein 607 59.06 0 631292..633211 + 639 86608111 - CYB_0623 - hypothetical protein 608 57.89 0 633208..633606 - 132 86608112 - CYB_0622 - hypothetical protein 609 59.37 0 634116..635006 + 296 86608113 tyrA CYB_0624 - prephenate dehydrogenase 610 59.87 0 635075..635824 + 249 86608114 - CYB_0625 - cytochrome c biogenesis membrane protein 611 58.30 0 635936..637345 + 469 86608115 - CYB_0626 - cytochrome c-type biogenesis protein ResB, putative 612 56.70 0 637687..637947 + 86 86608116 - CYB_0628 - ferredoxin-thioredoxin reductase, variable subunit 613 55.91 0 637944..638417 - 157 86608117 - CYB_0627 - hypothetical protein 614 55.28 0 638440..638562 + 40 86608118 - CYB_0629 - hypothetical protein 615 55.83 0 638633..639850 + 405 86608119 - CYB_0630 - ISSoc1, transposase 616 60.46 0 639992..641908 + 638 86608120 hflB CYB_0631 - cell division protein FtsH 617 59.85 0 642012..644168 - 718 86608121 - CYB_0632 - alpha-glucan phosphorylase, putative 618 60.24 0 644667..645770 - 367 86608122 - CYB_0633 - SpoIID/LytB domain-containing protein 619 57.81 0 645805..645996 - 63 86608123 - CYB_0634 - hypothetical protein 620 65.89 +1 646125..646640 - 171 86608124 - CYB_0635 - cytidine and deoxycytidylate deaminase family protein 621 61.11 0 646851..648092 + 413 86608125 - CYB_0636 - S1C family peptidase 622 61.12 0 648160..649764 + 534 86608126 - CYB_0637 - protein kinase 623 49.21 -2 650296..650421 + 41 86608127 - CYB_0638 - hypothetical protein 624 59.12 0 651097..651255 + 52 86608128 - CYB_0639 - hypothetical protein 625 43.38 -2 651867..652274 + 135 86608129 - CYB_0641 - ISSoc13, transposase orfB 626 63.03 +1 652537..653388 + 283 86608130 rbgA CYB_0642 - ribosomal biogenesis GTPase 627 58.80 0 653484..654602 - 372 86608131 - CYB_0643 - radical SAM domain-containing protein 628 55.46 0 654687..655052 + 121 86608132 - CYB_0644 - hypothetical protein 629 56.81 0 655133..655558 + 141 86608133 - CYB_0645 - hypothetical protein 630 54.13 -1 656104..657579 + 491 86608134 glgA CYB_0646 - glycogen synthase 631 58.96 0 657739..659346 + 535 86608135 - CYB_0647 - glycosy hydrolase family protein 632 63.38 +1 659644..661440 - 598 86608136 ilvB CYB_0648 - acetolactate synthase 3 catalytic subunit 633 59.25 0 661655..663232 + 525 86608137 - CYB_0649 - dolichyl-phosphate-mannose-protein mannosyltransferase 634 58.31 0 663342..664406 + 354 86608138 - CYB_0650 - oxidoreductase, NAD-binding 635 59.56 0 665042..666871 - 609 86608139 - CYB_0651 - putative membrane-bound protease 636 57.58 0 667103..667960 + 285 86608140 - CYB_0652 - hypothetical protein 637 59.88 0 668015..669001 - 328 86608141 - CYB_0653 - prephenate dehydratase 638 53.93 -1 669015..669383 - 122 86608142 - CYB_0654 - hypothetical protein 639 61.10 0 669567..670841 - 424 86608143 alr CYB_0655 - alanine racemase 640 61.30 0 670886..672040 - 384 86608144 sppA-1 CYB_0656 - signal peptide peptidase SppA, 36K type 641 54.07 -1 672274..672543 - 89 86608145 - CYB_0658 - hypothetical protein 642 56.27 0 672563..672841 - 92 86608146 - CYB_0659 - hypothetical protein 643 60.02 0 673292..674284 - 330 86608147 cyoE CYB_0660 - protoheme IX farnesyltransferase 644 59.38 0 674338..675297 - 319 86608148 - CYB_0661 - cytochrome oxidase assembly protein 645 58.75 0 675947..677032 - 361 86608149 - CYB_0662 - RNA polymerase sigma factor, group 1 646 55.39 0 677242..677640 + 132 86608150 - CYB_0663 - hypothetical protein 647 53.83 -1 677971..678336 + 121 86608151 - CYB_0664 - hypothetical protein 648 58.78 0 679816..680487 - 223 86608152 - CYB_0666 - phosphatidate cytidylyltransferase, putative 649 59.14 0 680497..680868 - 123 86608153 - CYB_0667 - cytochrome c family protein 650 64.00 +1 681090..682925 - 611 86608154 - CYB_0668 - glycosyl hydrolase domain-containing protein 651 63.14 +1 683073..684488 - 471 86608155 recQ CYB_0669 - ATP-dependent DNA helicase RecQ 652 61.15 0 684447..684827 + 126 86608156 - CYB_0670 - hypothetical protein 653 59.74 0 684863..685483 + 206 86608157 hisB CYB_0671 - imidazoleglycerol-phosphate dehydratase 654 56.50 0 685486..685662 + 58 86608158 - CYB_0672 - hypothetical protein 655 55.56 0 685810..685962 + 50 86608159 psbY CYB_0673 - photosystem II protein PsbY 656 61.67 0 685997..687097 + 366 86608160 - CYB_0674 - oxidoreductase, FAD-binding 657 57.84 0 687275..688180 + 301 86608161 - CYB_0675 - putative 6-pyruvoyl-tetrahydropterin synthase 658 64.77 +1 688191..689507 + 438 86608162 - CYB_0676 - hypothetical protein 659 60.01 0 689630..693067 + 1145 86608163 - CYB_0677 - trehalose synthase/putative maltokinase 660 60.87 0 693115..693873 + 252 86608164 - CYB_0679 - hypothetical protein 661 63.90 +1 693812..694969 - 385 86608165 dprA CYB_0678 - DNA protecting protein DprA 662 60.71 0 695048..695299 + 83 86608166 - CYB_0680 - hypothetical protein 663 60.27 0 695292..696746 + 484 86608167 - CYB_0681 - solute/sodium symporter (SSS) family protein 664 62.18 0 696771..697595 - 274 86608168 - CYB_0682 - CAAX amino terminal protease family protein 665 59.22 0 697611..697892 - 93 86608169 clpS-1 CYB_0683 - ATP-dependent Clp protease adaptor protein ClpS 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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