IslandPath Analysis: Shigella sonnei Ss046



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.65   STD DEV: 4.20
Shigella sonnei Ss046, complete genome - 1..4825265
4219 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
612	 50.93	0	693448..694203	+	251	74311228	-	SSON_0654	-	putative transposase subunit
613	 59.08	+1	694244..697630	+	1128	74311229	rhsA	SSON_0655	-	rhsA protein in rhs element
614	 54.37	0	697875..698378	+	167	74311230	-	SSON_0656	-	IS1 ORF
615	 53.14	0	698504..699922	-	472	74311231	phrB	SSON_0657	-	deoxyribodipyrimidine photolyase
616	 50.20	0	699919..700428	-	169	74311232	ybgA	SSON_0658	-	hypothetical protein
617	 54.37	0	700957..701460	-	167	74311233	-	SSON_0659	-	IS1 ORF
618	 51.69	0	701759..703240	-	493	74311234	ybgH	SSON_0660	-	putative transport protein
619	 53.23	0	703511..704254	+	247	74311235	ybgI	SSON_0661	-	putative hydrolase-oxidase
620	 57.53	+1	704277..704933	+	218	74311236	ybgJ	SSON_0662	-	putative carboxylase
621	 55.63	0	704927..705859	+	310	74311237	ybgK	SSON_0663	-	putative carboxylase
622	 56.87	+1	705849..706583	+	244	74311238	ybgL	SSON_0664	-	hypothetical protein
623	 52.15	0	706619..707410	+	263	74311239	nei	SSON_0665	-	endonuclease VIII
624	 55.68	0	707407..708498	-	363	74311240	abrB	SSON_0666	-	putative transport protein
625	 44.41	-1	708605..709696	-	363	74311241	ybgO	SSON_0667	-	hypothetical protein
626	 49.59	0	709663..710394	-	243	74311242	ybgP	SSON_0668	-	putative chaperone
627	 47.80	0	712918..713484	-	188	74311243	ybgD	S