IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
717	 49.32	+1	888179..889435	+	418	157960547	-	Spea_0719	-	sodium:dicarboxylate symporter
718	 49.89	+1	889568..890950	-	460	157960548	-	Spea_0720	-	two component, sigma54 specific, Fis family transcriptional regulator
719	 49.21	+1	890950..892977	-	675	157960549	-	Spea_0721	-	histidine kinase
720	 47.07	0	893397..895187	+	596	157960550	-	Spea_0722	-	flavocytochrome c
721	 37.42	-2	895957..896763	+	268	157960551	-	Spea_0723	-	alpha/beta hydrolase fold
722	 39.46	-1	897237..898313	-	358	157960552	-	Spea_0724	-	hypothetical protein
723	 42.99	0	899535..900539	+	334	157960553	-	Spea_0725	-	basic membrane lipoprotein
724	 45.21	0	900666..902282	+	538	157960554	-	Spea_0726	-	ABC transporter related
725	 47.30	0	902279..903409	+	376	157960555	-	Spea_0727	-	inner-membrane translocator
726	 50.62	+1	903413..904378	+	321	157960556	-	Spea_0728	-	inner-membrane translocator
727	 37.65	-2	904899..905315	+	138	157960557	-	Spea_0729	-	hypothetical protein
728	 38.67	-1	905