IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
612	 42.21	0	755440..758571	+	1043	157960442	-	Spea_0613	-	hypothetical protein
613	 45.58	0	758640..759488	+	282	157960443	-	Spea_0614	-	sporulation domain-containing protein
614	 42.42	0	759612..759941	-	109	157960444	-	Spea_0615	-	hypothetical protein
615	 45.70	0	760002..761036	-	344	157960445	-	Spea_0616	-	AraC family transcriptional regulator
616	 46.40	0	761205..762566	+	453	157960446	-	Spea_0617	-	hypothetical protein
617	 45.88	0	762721..763605	+	294	157960447	-	Spea_0618	-	hypothetical protein
618	 45.42	0	763617..763856	-	79	157960448	-	Spea_0619	-	hypothetical protein
619	 49.30	+1	763871..764296	-	141	157960449	-	Spea_0620	-	nitrate reductase cytochrome c-type subunit (NapB)
620	 49.50	+1	764293..765189	-	298	157960450	-	Spea_0621	-	quinol dehydrogenase membrane component
621	 48.84	+1	765186..765920	-	244	157960451	-	Spea_0622	-	quinol dehydrogenase periplasmic component
622	 48.49	+1	765981..768461	-	826	157960452	-	Spea_0623	-	nitrate reductas