IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
459	 49.01	+1	568608..569366	+	252	157960289	-	Spea_0460	-	uridine phosphorylase
460	 42.90	0	569440..570192	-	250	157960290	-	Spea_0461	-	hypothetical protein
461	 45.83	0	570582..571061	+	159	157960291	-	Spea_0462	-	hypothetical protein
462	 48.49	+1	571090..572019	+	309	157960292	-	Spea_0463	-	band 7 protein
463	 47.82	0	572019..572957	+	312	157960293	-	Spea_0464	-	band 7 protein
464	 45.41	0	573068..573481	+	137	157960294	-	Spea_0465	-	NUDIX hydrolase
465	 45.29	0	573816..575906	-	696	157960295	-	Spea_0466	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
466	 46.05	0	576330..576683	+	117	157960296	-	Spea_0467	-	endoribonuclease L-PSP
467	 49.40	+1	576841..579006	+	721	157960297	-	Spea_0468	-	DNA-dependent helicase II
468	 47.40	0	579168..580034	+	288	157960298	-	Spea_0469	-	4-hydroxybenzoate octaprenyltransferase
469	 46.14	0	580298..580828	+	176	157960299	-	Spea_0470	-	hypothetical protein
470	 44.31	0	580895..581914	-	339