IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
376	 49.64	+1	456668..457912	+	414	157960206	-	Spea_0377	-	diaminopimelate decarboxylase
377	 49.82	+1	457970..458806	+	278	157960207	-	Spea_0378	-	diaminopimelate epimerase
378	 46.29	0	458803..459435	+	210	157960208	-	Spea_0379	-	hypothetical protein
379	 48.09	0	459448..460362	+	304	157960209	-	Spea_0380	-	tyrosine recombinase XerC
380	 45.33	0	460359..461075	+	238	157960210	-	Spea_0381	-	HAD family hydrolase
381	 41.08	-1	461183..461647	+	154	157960211	-	Spea_0382	-	Egg lysin (Sperm-lysin)
382	 46.47	0	461706..462428	-	240	157960212	-	Spea_0383	-	hypothetical protein
383	 45.41	0	462769..463182	+	137	157960213	-	Spea_0384	-	hypothetical protein
384	 48.63	+1	463306..464730	+	474	157960214	-	Spea_0385	-	outer membrane efflux protein
385	 49.88	+1	464727..465953	+	408	157960215	-	Spea_0386	-	hypothetical protein
386	 48.83	+1	465965..469120	+	1051	157960216	-	Spea_0387	-	CzcA family heavy metal efflux protein
387	 48.08	0	469272..470804	-	510