IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4135	 47.62	0	5046308..5047084	+	258	157963965	-	Spea_4154	-	hypothetical protein
4136	 45.63	0	5047314..5047736	-	140	157963966	-	Spea_4155	-	hypothetical protein
4137	 46.20	0	5047871..5048422	+	183	157963967	-	Spea_4156	-	phospholipid/glycerol acyltransferase
4138	 50.08	+1	5048487..5049113	+	208	157963968	-	Spea_4157	-	lysine exporter protein LysE/YggA
4139	 45.56	0	5049203..5050462	-	419	157963969	-	Spea_4158	-	MscS mechanosensitive ion channel
4140	 49.53	+1	5050651..5051187	+	178	157963970	-	Spea_4159	-	hypothetical protein
4141	 43.75	0	5051557..5052708	+	383	157963971	-	Spea_4160	-	iron-containing alcohol dehydrogenase
4142	 41.41	-1	5052776..5053171	+	131	157963972	-	Spea_4161	-	hypothetical protein
4143	 46.61	0	5053349..5054011	+	220	157963973	-	Spea_4162	-	hypothetical protein
4144	 40.76	-1	5054242..5054982	+	246	157963974	-	Spea_4163	-	hypothetical protein
4145	 46.67	0	5055063..5056082	+	339	157963975	-	Spea_4164	-	1-aminocyclopropa