IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
4068	 47.62	0	4967741..4969105	-	454	157963898	-	Spea_4087	-	ABC transporter related
4069	 42.86	0	4969123..4971075	-	650	157963899	-	Spea_4088	-	TonB-dependent receptor
4070	 49.37	+1	4971514..4972872	+	452	157963900	-	Spea_4089	-	isochorismate synthase
4071	 44.55	0	4973090..4973749	+	219	157963901	-	Spea_4090	-	hypothetical protein
4072	 44.01	0	4973872..4974330	+	152	157963902	-	Spea_4091	-	GCN5-related N-acetyltransferase
4073	 48.75	+1	4975105..4977225	-	706	157963903	-	Spea_4092	-	histidine kinase
4074	 48.11	0	4977275..4978648	-	457	157963904	-	Spea_4093	-	two component, sigma54 specific, Fis family transcriptional regulator
4075	 44.65	0	4978937..4979749	+	270	157963905	-	Spea_4094	-	extracellular solute-binding protein
4076	 49.01	+1	4979746..4980453	+	235	157963906	-	Spea_4095	-	binding-protein-dependent transport systems inner membrane component
4077	 45.25	0	4980459..4981205	+	248	157963907	-	Spea_4096	-	ABC transporter related
4078	 46.10	0	4981258..4981860	+	200