IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3843	 47.41	0	4695484..4696101	+	205	157963673	-	Spea_3862	-	dimethylsulfoxide reductase chain B
3844	 47.17	0	4696103..4698190	+	695	157963674	-	Spea_3863	-	hypothetical protein
3845	 44.61	0	4698245..4698865	+	206	157963675	-	Spea_3864	-	cytoplasmic chaperone TorD family protein
3846	 42.35	0	4698856..4699221	+	121	157963676	-	Spea_3865	-	hypothetical protein
3847	 42.14	0	4699284..4699976	-	230	157963677	-	Spea_3866	-	TetR family transcriptional regulator
3848	 49.54	+1	4700246..4701979	+	577	157963678	-	Spea_3867	-	OPT family oligopeptide transporter
3849	 46.50	0	4702004..4703218	-	404	157963679	-	Spea_3868	-	OmpA/MotB domain-containing protein
3850	 49.24	+1	4703226..4714676	-	3816	157963680	-	Spea_3869	-	putative outer membrane adhesin like proteiin
3851	 41.61	-1	4715208..4715642	-	144	157963681	-	Spea_3870	-	hypothetical protein
3852	 49.13	+1	4715680..4717122	-	480	157963682	-	Spea_3871	-	pyridoxal-dependent decarboxylase
3853	 48.57	+1	4717313..4718572	-	419