IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3631	 44.73	0	4437204..4439573	-	789	157963461	-	Spea_3649	-	diguanylate cyclase/phosphodiesterase
3632	 44.98	0	4439560..4440486	-	308	157963462	-	Spea_3650	-	extracellular solute-binding protein
3633	 47.69	0	4440929..4442098	-	389	157963463	-	Spea_3651	-	nitric oxide reductase
3634	 44.80	0	4442100..4443581	-	493	157963464	-	Spea_3652	-	anaerobic nitric oxide reductase flavorubredoxin
3635	 49.60	+1	4443930..4445042	-	370	157963465	-	Spea_3653	-	cysteine synthase A
3636	 47.90	0	4445229..4446464	-	411	157963466	-	Spea_3654	-	aminotransferase class I and II
3637	 49.22	+1	4446808..4448991	-	727	157963467	-	Spea_3655	-	glycoside hydrolase family protein
3638	 28.47	-2	4449202..4449489	-	95	157963468	-	Spea_3656	-	hypothetical protein
3639	 45.83	0	4449630..4449893	+	87	157963469	-	Spea_3657	-	hypothetical protein
3640	 47.38	0	4449890..4450921	+	343	157963470	-	Spea_3658	-	multidrug resistance efflux pump
3641	 42.29	0	4451017..4451697	-	226	157963471