version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3560 42.51 0 4366442..4367662 - 406 157963390 - Spea_3576 - histidine kinase A domain-containing protein 3561 46.22 0 4367649..4368323 - 224 157963391 - Spea_3577 - two component transcriptional regulator 3562 40.23 -1 4368327..4369094 - 255 157963392 - Spea_3578 - LuxR family transcriptional regulator 3563 47.35 0 4369592..4370854 - 420 157963393 - Spea_3579 - hypothetical protein 3564 48.00 0 4370968..4372044 - 358 157963394 - Spea_3580 - alanine racemase 3565 47.12 0 4372138..4373544 - 468 157963395 - Spea_3581 - replicative DNA helicase 3566 47.63 0 4373668..4375899 + 743 157963396 - Spea_3582 - hypothetical protein 3567 43.27 0 4376534..4376986 - 150 157963397 - Spea_3583 - 50S ribosomal protein L9 3568 42.11 0 4377014..4377241 - 75 157963398 - Spea_3584 - ribosomal protein S18 3569 42.81 0 4377253..4377558 - 101 157963399 - Spea_3585 - primosomal replication protein N 3570 46.14 0 4377567..4377980 - 137 157963400 - Spea_3586 - 30S ribosomal protein S6 3571 45.03 0 4378304..4379047 + 247 157963401 - Spea_3587 - hypothetical protein 3572 45.79 0 4379122..4381209 - 695 157963402 - Spea_3588 - prolyl oligopeptidase 3573 50.07 +1 4381422..4382162 - 246 157963403 - Spea_3589 - 23S rRNA (guanosine-2'-O-)-methyltransferase 3574 47.72 0 4382163..4384622 - 819 157963404 - Spea_3590 - ribonuclease R 3575 44.39 0 4384665..4385288 - 207 157963405 - Spea_3591 - Sel1 domain-containing protein 3576 45.52 0 4385473..4386768 - 431 157963406 - Spea_3592 - adenylosuccinate synthetase 3577 35.98 -2 4386835..4387023 - 62 157963407 - Spea_3593 - hypothetical protein 3578 47.33 0 4387288..4387680 - 130 157963408 - Spea_3594 - 30S ribosomal protein S9 3579 43.52 0 4387695..4388126 - 143 157963409 - Spea_3595 - 50S ribosomal protein L13 3580 44.84 0 4388492..4389595 - 367 157963410 - Spea_3596 - AFG1 family ATPase 3581 40.62 -1 4389886..4390242 + 118 157963411 - Spea_3597 - hypothetical protein 3582 48.97 +1 4390475..4391830 + 451 157963412 - Spea_3598 - protease Do 3583 45.61 0 4391967..4393049 + 360 157963413 - Spea_3599 - periplasmic serine protease DegS 3584 48.41 0 4393686..4395356 - 556 157963414 - Spea_3600 - hypothetical protein 3585 44.30 0 4395511..4396185 - 224 157963415 - Spea_3601 - response regulator receiver protein 3586 47.74 0 4396185..4397579 - 464 157963416 - Spea_3602 - histidine kinase 3587 48.14 0 4397724..4398986 - 420 157963417 - Spea_3603 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3588 42.06 0 4399008..4399259 - 83 157963418 - Spea_3604 - BolA family protein 3589 39.80 -1 4399273..4399566 - 97 157963419 - Spea_3605 - SpoIIAA family protein 3590 41.96 0 4399566..4400237 - 223 157963420 - Spea_3606 - toluene tolerance family protein 3591 43.10 0 4400270..4400740 - 156 157963421 - Spea_3607 - hypothetical protein 3592 49.75 +1 4400813..4401598 - 261 157963422 - Spea_3608 - hypothetical protein 3593 48.09 0 4401585..4402397 - 270 157963423 - Spea_3609 - ABC transporter related 3594 46.25 0 4402573..4403532 + 319 157963424 - Spea_3610 - CaCA family Na(+)/Ca(+) antiporter 3595 46.83 0 4403579..4404556 + 325 157963425 - Spea_3611 - KpsF/GutQ family protein 3596 46.20 0 4404558..4405109 + 183 157963426 - Spea_3612 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3597 44.80 0 4405106..4405663 + 185 157963427 - Spea_3613 - hypothetical protein 3598 46.48 0 4405734..4406273 + 179 157963428 - Spea_3614 - cell envelope biogenesis YhbN 3599 47.54 0 4406270..4407001 + 243 157963429 - Spea_3615 - ABC transporter related 3600 45.22 0 4407138..4408601 + 487 157963430 - Spea_3616 - RNA polymerase factor sigma-54 3601 40.62 -1 4408632..4408919 + 95 157963431 - Spea_3617 - sigma 54 modulation protein/ribosomal protein S30EA 3602 44.59 0 4408922..4409365 + 147 157963432 - Spea_3618 - PTS IIA-like nitrogen-regulatory protein PtsN 3603 45.29 0 4410427..4410702 + 91 157963433 - Spea_3621 - phosphotransferase system, phosphocarrier protein HPr 3604 47.77 0 4410799..4412163 + 454 157963434 - Spea_3622 - magnesium transporter 3605 46.27 0 4412232..4413035 - 267 157963435 - Spea_3623 - hypothetical protein 3606 50.37 +1 4413299..4413973 - 224 157963436 - Spea_3624 - OmpA/MotB domain-containing protein 3607 40.54 -1 4414420..4414641 + 73 157963437 - Spea_3625 - transposase IS3/IS911 family protein 3608 45.57 0 4414841..4416376 - 511 157963438 - Spea_3626 - FG-GAP repeat-containing protein 3609 46.72 0 4416487..4416837 - 116 157963439 - Spea_3627 - GtrA family protein 3610 50.90 +1 4416924..4418363 - 479 157963440 - Spea_3628 - glycosyl transferase family protein 3611 47.40 0 4418363..4419400 - 345 157963441 - Spea_3629 - glycosyl transferase family protein 3612 46.44 0 4419509..4420210 + 233 157963442 - Spea_3630 - two component transcriptional regulator 3613 46.07 0 4420213..4421562 + 449 157963443 - Spea_3631 - histidine kinase 3614 47.22 0 4421588..4422163 - 191 157963444 - Spea_3632 - PGAP1 family protein 3615 48.24 0 4422365..4423417 + 350 157963445 - Spea_3633 - hypothetical protein 3616 44.62 0 4424025..4425194 + 389 157963446 - Spea_3634 - major facilitator transporter 3617 46.98 0 4425503..4426579 + 358 157963447 - Spea_3635 - 23S rRNA methyluridine methyltransferase 3618 42.38 0 4426884..4427093 + 69 157963448 - Spea_3636 - TOBE domain-containing protein 3619 44.44 0 4427213..4427536 - 107 157963449 - Spea_3637 - hypothetical protein 3620 48.27 0 4427644..4428192 - 182 157963450 - Spea_3638 - hypothetical protein 3621 45.70 0 4428195..4428485 - 96 157963451 - Spea_3639 - hypothetical protein 3622 51.09 +1 4428728..4429324 - 198 157963452 - Spea_3640 - ABC transporter related 3623 52.82 +2 4429308..4430015 - 235 157963453 - Spea_3641 - ABC transporter related 3624 52.59 +2 4430009..4430839 - 276 157963454 - Spea_3642 - binding-protein-dependent transport systems inner membrane component 3625 49.28 +1 4430832..4431809 - 325 157963455 - Spea_3643 - binding-protein-dependent transport systems inner membrane component 3626 51.47 +1 4431806..4433338 - 510 157963456 - Spea_3644 - extracellular solute-binding protein 3627 47.45 0 4433525..4433935 + 136 157963457 - Spea_3645 - CopG family transcriptional regulator 3628 49.78 +1 4434120..4434788 + 222 157963458 - Spea_3646 - hypothetical protein 3629 45.53 0 4434861..4435352 - 163 157963459 - Spea_3647 - peptidyl-prolyl cis-trans isomerase cyclophilin type 3630 46.61 0 4435713..4437098 + 461 157963460 - Spea_3648 - aminotransferase class V 3631 44.73 0 4437204..4439573 - 789 157963461 - Spea_3649 - diguanylate cyclase/phosphodiesterase 3632 44.98 0 4439560..4440486 - 308 157963462 - Spea_3650 - extracellular solute-binding protein 3633 47.69 0 4440929..4442098 - 389 157963463 - Spea_3651 - nitric oxide reductase 3634 44.80 0 4442100..4443581 - 493 157963464 - Spea_3652 - anaerobic nitric oxide reductase flavorubredoxin 3635 49.60 +1 4443930..4445042 - 370 157963465 - Spea_3653 - cysteine synthase A 3636 47.90 0 4445229..4446464 - 411 157963466 - Spea_3654 - aminotransferase class I and II 3637 49.22 +1 4446808..4448991 - 727 157963467 - Spea_3655 - glycoside hydrolase family protein 3638 28.47 -2 4449202..4449489 - 95 157963468 - Spea_3656 - hypothetical protein 3639 45.83 0 4449630..4449893 + 87 157963469 - Spea_3657 - hypothetical protein 3640 47.38 0 4449890..4450921 + 343 157963470 - Spea_3658 - multidrug resistance efflux pump 3641 42.29 0 4451017..4451697 - 226 157963471 - Spea_3659 - response regulator receiver protein 3642 45.24 0 4451980..4452231 + 83 157963472 - Spea_3660 - hypothetical protein 3643 43.39 0 4452358..4453680 - 440 157963473 - Spea_3661 - hypothetical protein 3644 48.43 0 4454085..4455455 + 456 157963474 - Spea_3662 - xanthine/uracil/vitamin C permease 3645 43.90 0 4455524..4457056 - 510 157963475 - Spea_3663 - integral membrane protein TerC 3646 43.57 0 4457438..4460005 - 855 157963476 - Spea_3664 - hypothetical protein 3647 48.52 +1 4460379..4461155 - 258 157963477 - Spea_3665 - hypothetical protein 3648 46.62 0 4461179..4462345 - 388 157963478 - Spea_3666 - hypothetical protein 3649 46.36 0 4462614..4465922 - 1102 157963479 - Spea_3667 - metal dependent phosphohydrolase 3650 45.04 0 4466206..4466487 + 93 157963480 - Spea_3668 - hypothetical protein 3651 45.43 0 4466598..4467002 - 134 157963481 - Spea_3669 - hypothetical protein 3652 45.79 0 4467090..4467386 - 98 157963482 - Spea_3670 - hypothetical protein 3653 42.62 0 4467837..4468493 - 218 157963483 - Spea_3671 - pentapeptide repeat-containing protein 3654 38.06 -2 4469014..4470873 + 619 157963484 - Spea_3672 - methyl-accepting chemotaxis sensory transducer 3655 45.10 0 4471189..4471545 + 118 157963485 - Spea_3673 - hypothetical protein 3656 48.24 0 4471892..4473541 - 549 157963486 - Spea_3674 - BCCT transporter 3657 47.82 0 4473931..4474434 - 167 157963487 - Spea_3675 - glycine cleavage system regulatory protein-like protein 3658 42.07 0 4475976..4478126 + 716 157963488 - Spea_3676 - metallophosphoesterase 3659 43.26 0 4478257..4479435 - 392 157963489 - Spea_3677 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0