IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3250	 44.97	0	4000859..4002826	-	655	157963080	-	Spea_3263	-	hypothetical protein
3251	 45.36	0	4004145..4005233	-	362	157963081	-	Spea_3264	-	hypothetical protein
3252	 45.22	0	4006097..4007728	-	543	157963082	-	Spea_3266	-	methyl-accepting chemotaxis sensory transducer
3253	 46.25	0	4008015..4009160	-	381	157963083	-	Spea_3267	-	diguanylate cyclase
3254	 45.78	0	4009692..4010615	-	307	157963084	-	Spea_3268	-	BAX protein
3255	 44.44	0	4010800..4011078	-	92	157963085	-	Spea_3269	-	hypothetical protein
3256	 38.61	-2	4011330..4011917	+	195	157963086	-	Spea_3270	-	GCN5-related N-acetyltransferase
3257	 47.46	0	4012150..4013388	+	412	157963087	-	Spea_3271	-	manganese transporter NRAMP
3258	 45.24	0	4013808..4015235	+	475	157963088	-	Spea_3272	-	citrate transporter
3259	 41.95	0	4015304..4015570	-	88	157963089	-	Spea_3273	-	hypothetical protein
3260	 44.80	0	4015714..4017126	+	470	157963090	-	Spea_3274	-	hypothetical protein
3261	 43.34	0	4017075..4019