IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3146	 43.03	0	3863366..3864334	-	322	157962976	-	Spea_3159	-	hydrolase (secreted protein)
3147	 44.07	0	3864623..3864976	-	117	157962977	-	Spea_3160	-	hypothetical protein
3148	 42.08	0	3865578..3866594	+	338	157962978	-	Spea_3161	-	transposase IS116/IS110/IS902 family protein
3149	 43.09	0	3872842..3873405	+	187	157962979	-	Spea_3162	-	hypothetical protein
3150	 40.98	-1	3873495..3873821	-	108	157962980	-	Spea_3163	-	hypothetical protein
3151	 46.11	0	3874215..3876788	-	857	157962981	-	Spea_3164	-	ATPase
3152	 45.38	0	3877014..3877760	-	248	157962982	-	Spea_3165	-	hypothetical protein
3153	 45.58	0	3877760..3878731	-	323	157962983	-	Spea_3166	-	RluA family pseudouridine synthase
3154	 40.52	-1	3878809..3879615	+	268	157962984	-	Spea_3167	-	putative lipoprotein
3155	 44.29	0	3879732..3881903	-	723	157962985	-	Spea_3168	-	exporter of the RND superfamily protein-like protein
3156	 46.86	0	3882417..3884279	-	620	157962986	-	Spea_3169	-	methyl-acceptin